View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_high_60 (Length: 315)
Name: NF16077_high_60
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_high_60 |
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Alignment Details
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 32658248 - 32657966
Alignment:
| Q |
14 |
attatacttctaaacaaactatcctaaatcatcctaatcatagagcgtttgagtatttgcatgagcgtatatattgtcactatttgttggacctgcagtg |
113 |
Q |
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| T |
32658248 |
attatacttctaaacaaactatcctaaatcatcctaatcatagagcgtttgagtatttgcatgagcgtatatattgtcactatttgttggacctgcagtc |
32658149 |
T |
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| Q |
114 |
atcatcactagaccttagaaatttaaatcgatcggggacccaattttagtccaagattgaacactgattaagctaaatgtactctacggtttactttatt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32658148 |
atcatcactagaccttagaaatttaaatcgatcggggacccaattttagtccaagattgaacactgattaagctacatgtactctacggtttactttatt |
32658049 |
T |
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| Q |
214 |
aatcatcacacataagtttctatataacaagatgtatccatgttcttctactagacagtagtacacttggtccatatagtttg |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32658048 |
aatcatcacacataagtttctatataacaagatgtatccatgttcttctactagacagtagtacacttggtccatatagtttg |
32657966 |
T |
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