View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_high_87 (Length: 262)
Name: NF16077_high_87
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_high_87 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 35417808 - 35417577
Alignment:
| Q |
13 |
aaaattataacttactcctccttcctacaaatcccatatttgtttatttttgttgctaaaactatttgccaacaaactcataccttcctcttattctctt |
112 |
Q |
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| T |
35417808 |
aaaattataacttactcctccttcctacaaatcccatatttgtttatttttgttgctaaaactatttgccaacaaactcataccttcctcttattctctt |
35417709 |
T |
|
| Q |
113 |
gttttttccttcatttccacttcttcctacaccaataaccgaaagctcaatctcaactactcattcaaattcaaacccttctcttcaaatgttggaacta |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35417708 |
gttttttccttcatttccacttcttcctacaccaataaccgaaagctcaatctcaactactcattcaaattcaaacccttctcttcaaatgttggaacta |
35417609 |
T |
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| Q |
213 |
aagactcccctcaagaacaaaggattctatgt |
244 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
35417608 |
aagactcccctcaagaacaaaggattctatgt |
35417577 |
T |
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