View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16077_low_13 (Length: 550)

Name: NF16077_low_13
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16077_low_13
NF16077_low_13
[»] chr8 (45 HSPs)
chr8 (13-523)||(4887262-4887777)
chr8 (13-253)||(4826357-4826600)
chr8 (15-253)||(4692147-4692385)
chr8 (310-486)||(4773730-4773901)
chr8 (324-524)||(4739250-4739451)
chr8 (13-253)||(4919625-4919869)
chr8 (15-220)||(4684195-4684400)
chr8 (287-485)||(4691625-4691820)
chr8 (13-253)||(4729113-4729353)
chr8 (13-253)||(4773245-4773493)
chr8 (307-485)||(4792000-4792173)
chr8 (13-253)||(4739865-4740105)
chr8 (307-485)||(4683605-4683778)
chr8 (324-485)||(4752431-4752587)
chr8 (31-220)||(4753008-4753197)
chr8 (13-231)||(4801433-4801655)
chr8 (307-485)||(4920467-4920640)
chr8 (324-485)||(4728559-4728715)
chr8 (301-445)||(4718275-4718416)
chr8 (308-476)||(4827053-4827216)
chr8 (309-445)||(4910514-4910650)
chr8 (15-266)||(4708843-4709094)
chr8 (324-486)||(4705819-4705976)
chr8 (307-445)||(4871416-4871554)
chr8 (305-445)||(4898222-4898362)
chr8 (309-445)||(10449697-10449833)
chr8 (13-237)||(4846736-4846964)
chr8 (15-194)||(4719097-4719276)
chr8 (307-421)||(4801855-4801969)
chr8 (307-421)||(4847160-4847274)
chr8 (305-445)||(21437138-21437278)
chr8 (15-105)||(4791108-4791198)
chr8 (13-93)||(4897799-4897879)
chr8 (13-91)||(4910045-4910123)
chr8 (28-91)||(21436694-21436757)
chr8 (13-90)||(4870126-4870203)
chr8 (13-93)||(10450583-10450663)
chr8 (13-93)||(10455009-10455089)
chr8 (137-229)||(4791422-4791514)
chr8 (150-248)||(4870266-4870364)
chr8 (150-202)||(4897936-4897988)
chr8 (148-200)||(4910180-4910232)
chr8 (147-203)||(10450282-10450338)
chr8 (147-203)||(10454708-10454764)
chr8 (148-202)||(21436814-21436868)
[»] chr5 (1 HSPs)
chr5 (25-77)||(24000639-24000691)


Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 523
Target Start/End: Original strand, 4887262 - 4887777
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaat---ccagactaagtgcaatgta 109  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||    
T  4887262 aatatgttggatggtttcaaatctctgtgcataataggtggtttacatccattatgcagatactccaatcctgaaaattatccacactaagtgcaatgta 4887361  T
Q  110 agggtacacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcgg 209  Q
    |||||||| || | ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| |     
T  4887362 agggtacataatgcaagaaagattttgtcataaacaatacattaccatatgctgcatcaactgcaatgttaagtctctcattccaatttaagatctttga 4887461  T
Q  210 attttccactgtatgcaaataggcattagtattgaaattctgaa--gaagtcttttaaaagagaaatcatatgaaattctgaccttgcagataaaatata 307  Q
    ||||||||||| ||||| ||||||||| | |||||||| |||||  |||   |||  |||  |||| ||||||||||||| ||  |||  || |||||||    
T  4887462 attttccactgcatgcatataggcatttgaattgaaat-ctgaacagaaaggtttctaaaacgaaagcatatgaaattctaacaatgccaatcaaatata 4887560  T
Q  308 attacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaa 407  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4887561 attacctaataattgttgttgcagatttccattagccatgtattcataaatcaatgctttgatttcaccttcattacaatatccaatgagggagaccaaa 4887660  T
Q  408 tttctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtg-aaataaagcacgattatcgtttta 506  Q
    |||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||| ||| |||| ||||||||    
T  4887661 tttctatgatgaacaattgttagaagttgtgcctgcattaatatttaaattttatctctatcaaagttaacactgaaaataatgcaggattctcgtttta 4887760  T
Q  507 aatattacttcactaaa 523  Q
    |||||||||| ||||||    
T  4887761 aatattacttaactaaa 4887777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 4826357 - 4826600
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagg 112  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||||    
T  4826357 aatatgttggatggtttcaaatctctatgtaaaataggtggtttacatccattatgcatataatccaatcctgaaaattcacactaattgcaatgtaagg 4826456  T
Q  113 gtacacaacggaag-aaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggat 211  Q
    |||||||| | ||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || |  |    
T  4826457 gtacacaatgcaagaaaagatgctatcataaacaatacattaccttgtgctgcatcaactgcaatgttaagtctctcgttccagtttaagatatttgagt 4826556  T
Q  212 tttccactgtatgcaaatag--gcattagtattgaaattctgaa 253  Q
    ||||||||| ||||||||||   ||||| ||||| |||||||||    
T  4826557 tttccactgcatgcaaatagacacattaatattggaattctgaa 4826600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 4692385 - 4692147
Alignment:
Q  15 tatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagggt 114  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || ||| ||||| ||||| |    
T  4692385 tatgttagaaggcttcaaatctctatgcataataggtggtttacatccattatgcagataatccaatcctgaaaattcacacaaagggcaatataaggct 4692286  T
Q  115 acacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggatttt 214  Q
     || || | |||||| |||||  |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||  | |  ||||    
T  4692285 gcaaaatgcaagaaatatgtttccataaacaatacattaccatgtgctgcatcaactgcaatcttaagcctctcattccaatttaagatagttgagtttt 4692186  T
Q  215 ccactgtatgcaaataggcattagtattgaaattctgaa 253  Q
    |||||| |||||||||| |||||||  ||||||||||||    
T  4692185 ccactgcatgcaaatagacattagtcatgaaattctgaa 4692147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 310 - 486
Target Start/End: Original strand, 4773730 - 4773901
Alignment:
Q  310 tacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaatt 409  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||  ||||||||||||||    
T  4773730 tacctaataaatgttgttggagatttccattggccatgtattcataaattaatgctttgatttcaccttcatcacaatatccaacaagggagaccaaatt 4773829  T
Q  410 tctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaat 486  Q
    |||||||||||| || ||||||||||||||||||||     |||||||||||| |||||||||||||||| ||||||    
T  4773830 tctatgatgaacaactgttagaagttgtgcctgcat-----tttaaattttatatctatcaaagttaactatgaaat 4773901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 324 - 524
Target Start/End: Complemental strand, 4739451 - 4739250
Alignment:
Q  324 tgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaatttctatgatgaacga 423  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||| |||||  |||||||||||||||||||| |    
T  4739451 tgttgcagatttccattggccatgtattcataaatcaatgctctgatttgaccttcatcacaatatccaaggaggggaaccaaatttctatgatgaacaa 4739352  T
Q  424 ccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtg-aaataaagcacgattatcgttttaaatattacttcactaa 522  Q
     | |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||| |||  ||| ||||||||||||||| || |||||    
T  4739351 tcattagaagttgtgtctgcattaatatttaaattttatccctatcaaagttaactgtgaaaataatgcagaattctcgttttaaatattaattaactaa 4739252  T
Q  523 aa 524  Q
    ||    
T  4739251 aa 4739250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 4919625 - 4919869
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctg-aaaatccagactaagtgcaatgtaag 111  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||| || ||| ||| |||||||||    
T  4919625 aatatgttggacggcttcaaatctctatgcataataggtggttggcatccattatgcagataatccaatcctgaaaaattcacactgagttcaatgtaag 4919724  T
Q  112 ggtacacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggat 211  Q
    ||||  | |   |||||||| |||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || | |     
T  4919725 ggtaggctatacaagaaagaagttgccataaatagtacattaccgtttgctgcatcaactgcaatgttaagtctctcattccattttaagatatttgaag 4919824  T
Q  212 tttccactgtatgcaa---ataggcattagtattgaaattctgaa 253  Q
    ||||| ||| ||||||   |||||||||||| |||||| ||||||    
T  4919825 tttccgctgcatgcaaattataggcattagtcttgaaactctgaa 4919869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 4684400 - 4684195
Alignment:
Q  15 tatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagggt 114  Q
    |||||| || || ||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||| || |||||| |||||||||| ||    
T  4684400 tatgtttgaaggcttcaaatctctatgcatgatcggtggtttgcatccattatgcagataatccaatcctgaaaattcacactaagggcaatgtaagtgt 4684301  T
Q  115 acacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggatttt 214  Q
     ||||| | |||| | ||  ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||||    
T  4684300 gcacaatgcaagacaaattctgtcataaacaatacattaccttgtgctgcgtcaactgcaatgttaagcctctcattccaatttaagatattcgaatttt 4684201  T
Q  215 ccactg 220  Q
    ||||||    
T  4684200 ccactg 4684195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 287 - 485
Target Start/End: Complemental strand, 4691820 - 4691625
Alignment:
Q  287 tgaccttgcagataaaatataa--ttacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattac 384  Q
    |||| |||| ||||||||||||  ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||    
T  4691820 tgacattgctgataaaatataaaattaccaaataagtgttgttggagatttccattggccatatattcataaatcaatgctttgatttcaccttcatcac 4691721  T
Q  385 aatatccaatgagggagaccaaatttctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaa 484  Q
    ||||||||||||| || |||||||||||||||||||| | | |||||||||||||||||||      || ||||||||||||| ||||||||||||||||    
T  4691720 aatatccaatgagagataccaaatttctatgatgaacaatcattagaagttgtgcctgcat-----gttcaattttatctctaccaaagttaactgtgaa 4691626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 13 - 253
Target Start/End: Complemental strand, 4729353 - 4729113
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagg 112  Q
    |||||||| || || |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| || |||||| |||||||||||    
T  4729353 aatatgtttgatggcttcaaatctctatgcataataggtggcttacatccattatgaagataatccaatcctgaaaattcacactaagggcaatgtaagg 4729254  T
Q  113 gtacacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggatt 212  Q
    |  ||||| | |||||| ||| || ||||||||||| |||||| |||||||  ||||||||||||||||| |||||||||||  ||||||| || | |||    
T  4729253 gagcacaatgcaagaaacatgctgccataaacaataaattaccatgtgctgtgtcaactgcaatgttaagcctctcattccaacttaagatatttgaatt 4729154  T
Q  213 ttccactgtatgcaaataggcattagtattgaaattctgaa 253  Q
    |||||||| ||| ||| |  ||||||| ||||||| |||||    
T  4729153 ttccactgcatgaaaacatacattagtcttgaaatactgaa 4729113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 4773245 - 4773493
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagg 112  Q
    |||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||| | | ||||| ||||||||||||    
T  4773245 aatatgtttgaaggtttcaaatctctatgcatagtaggtggtttgcatccattatgcagataatccaatcctgcaaaacaacactaaatgcaatgtaagg 4773344  T
Q  113 gtacacaacggaagaaagatgttgtcataaacaatacatta--------ccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatc 204  Q
     | ||||| | |||||||| | |   ||||| |||||||||        ||||||||||||||||||||||||||||||||||||||||| ||||| ||     
T  4773345 atgcacaatgcaagaaagacgattctataaataatacattaattaattaccgtgtgctgcatcaactgcaatgttaagtctctcattccaatttaacata 4773444  T
Q  205 ttcggattttccactgtatgcaaataggcattagtattgaaattctgaa 253  Q
    || | ||||||||||| |||||||||||||||||| | |||||||||||    
T  4773445 tttgaattttccactgcatgcaaataggcattagtctcgaaattctgaa 4773493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 307 - 485
Target Start/End: Original strand, 4792000 - 4792173
Alignment:
Q  307 aattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaa 406  Q
    |||||||| |||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||| |||||||| ||||||||    
T  4792000 aattacctgataaatgttgttgtagatttccattggccatgtactcataaatcaatgctttaatttcaccttcatcacaatacccaatgagagagaccaa 4792099  T
Q  407 atttctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaa 485  Q
    ||||||||||||||| | |||||||||||||||||||||     ||||||||||||||||| ||||||||| |||||||    
T  4792100 atttctatgatgaacaatcgttagaagttgtgcctgcat-----tttaaattttatctctaccaaagttaagtgtgaaa 4792173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 253
Target Start/End: Complemental strand, 4740105 - 4739865
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagg 112  Q
    |||||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||| | |||||||||    
T  4740105 aatatgtttgaaggcttcaaatctctatgcataataggaggtttacatccattatgcagataatccaatcctgaaaattcacactaaggggaatgtaagg 4740006  T
Q  113 gtacacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggatt 212  Q
    || ||||| | |||||| ||| |  |||||||||||||||||| |||||||  |||||||||||| |||| |||||||||||  ||||||| || | |||    
T  4740005 gtgcacaatgcaagaaacatgcttccataaacaatacattaccatgtgctgtgtcaactgcaatgctaagcctctcattccaacttaagatatttgaatt 4739906  T
Q  213 ttccactgtatgcaaataggcattagtattgaaattctgaa 253  Q
    |||||||| |||  || |  ||||||| ||||||| |||||    
T  4739905 ttccactgcatgagaacatacattagtcttgaaatactgaa 4739865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 307 - 485
Target Start/End: Complemental strand, 4683778 - 4683605
Alignment:
Q  307 aattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaa 406  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||| ||| ||||||| ||| ||||||||    
T  4683778 aattacctaacaaatgttgttggagatttcctttggccatgtattcataaatcaatgctttgatttcagtttcatcacagtatccaaggagagagaccaa 4683679  T
Q  407 atttctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaa 485  Q
    ||||||||||||||| | | |||||||||||||||||||     ||||||||||||||||| |||||||||||||||||    
T  4683678 atttctatgatgaacaatcattagaagttgtgcctgcat-----tttaaattttatctctaccaaagttaactgtgaaa 4683605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 324 - 485
Target Start/End: Complemental strand, 4752587 - 4752431
Alignment:
Q  324 tgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaatttctatgatgaacga 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||| ||||| ||||||||||||||||||||| |    
T  4752587 tgttggagatttccattggccatgtattcataaatcaatgctttggtttgaccttcatcacaatatccaaggagggggaccaaatttctatgatgaacaa 4752488  T
Q  424 ccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaa 485  Q
     | |||||||||||||||||||     ||||||||||||||||| |||||||||||||||||    
T  4752487 tcattagaagttgtgcctgcat-----tttaaattttatctctaccaaagttaactgtgaaa 4752431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 31 - 220
Target Start/End: Complemental strand, 4753197 - 4753008
Alignment:
Q  31 aaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagggtacacaacggaagaaag 130  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | |||||| ||||||||||||| ||||| | ||||||     
T  4753197 aaatctctatgcataataggtggtttacatccattatgcagataatccaatcctgaaaattgacactaagggcaatgtaagggtgcacaatgcaagaaac 4753098  T
Q  131 atgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggattttccactg 220  Q
    ||| || |||||||||||| ||||| |||||||  ||||||||||||||||| |||||||||||  ||||||| || | |||||| ||||    
T  4753097 atgctgccataaacaatactttaccatgtgctgtgtcaactgcaatgttaagcctctcattccaacttaagatatttgaattttctactg 4753008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 4801433 - 4801655
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagac----taagtgcaatgt 108  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||    ||||||| ||||    
T  4801433 aatatgttggaagacttcaaatctctatgcataataggtggtttacacccattatgcagataatccaatcctgaaaatccacactaattaagtgctatgt 4801532  T
Q  109 aagggtacacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcg 208  Q
    ||||||||   | | ||||||||| |||  ||||| | ||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||| || |    
T  4801533 aagggtactttatgcaagaaagattttgcaataaatagtacattaccatgtgctgcatcaactgcaattttaagtctcttagtccagtttaagatatttg 4801632  T
Q  209 gattttccactgtatgcaaatag 231  Q
     ||||||||||| ||| ||||||    
T  4801633 aattttccactgcatgaaaatag 4801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 307 - 485
Target Start/End: Original strand, 4920467 - 4920640
Alignment:
Q  307 aattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaa 406  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  4920467 aattaccttgtaagtgttgttggagatttccattggccatgtattcataaaccaatgctttgatttcaccttcatcacaatatccgatgagagagaccaa 4920566  T
Q  407 atttctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaa 485  Q
    ||||||||||||||| | | |||||||||||||||||||     |||||||||| | |||| |||||||||| ||||||    
T  4920567 atttctatgatgaacaatcattagaagttgtgcctgcat-----tttaaattttgtatctaacaaagttaaccgtgaaa 4920640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 324 - 485
Target Start/End: Complemental strand, 4728715 - 4728559
Alignment:
Q  324 tgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaatttctatgatgaacga 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||| | ||||||||||||||||||||| |    
T  4728715 tgttggagatttccattggccatgtattcataaatcaatgctttgatttgaccttcatcacaatatccgatgagagggaccaaatttctatgatgaacaa 4728616  T
Q  424 ccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaa 485  Q
     | |||||||||||||||||||     ||||| |||||||||||| ||| ||||||||||||    
T  4728615 tcattagaagttgtgcctgcat-----tttaatttttatctctatgaaatttaactgtgaaa 4728559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 301 - 445
Target Start/End: Complemental strand, 4718416 - 4718275
Alignment:
Q  301 aaatataattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgaggga 400  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||  ||||||||||||||| |||  ||||||| |||||||||||  ||||     
T  4718416 aaatataattacctaataattgttg---gagatttccattggccatgtatttgtaaatcaatgctttggtttgaccttcatcacaatatccaagtagggg 4718320  T
Q  401 gaccaaatttctatgatgaacgaccgttagaagttgtgcctgcat 445  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||    
T  4718319 gaccaaatttctatgatgaacaaccattagaagttgtgcctgcat 4718275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 476
Target Start/End: Original strand, 4827053 - 4827216
Alignment:
Q  308 attacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaa 407  Q
    |||||| ||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  4827053 attaccaaataaatgctgttggagatttccatttgccatatattcataaatcaatgctttgatttccccttcatcacaatacccaatgagtgagaccaaa 4827152  T
Q  408 tttctatgatgaacgaccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagtta 476  Q
    |||| ||||||||| |  | ||||||||| ||||||||     ||||| ||||||||||| ||||||||    
T  4827153 tttcgatgatgaacaattgctagaagttgcgcctgcat-----tttaatttttatctctaccaaagtta 4827216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 309 - 445
Target Start/End: Original strand, 4910514 - 4910650
Alignment:
Q  309 ttacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaat 408  Q
    |||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| || ||||| ||||||||||    
T  4910514 ttacttaataagtgttgttgaacatttccattggccatgtattcataaatcaatgctttgatttcatcttcatcacaataaccgatgagagagaccaaat 4910613  T
Q  409 ttctatgatgaacgaccgttagaagttgtgcctgcat 445  Q
    ||||||||||||| ||| |||||||||| ||||||||    
T  4910614 ttctatgatgaacaaccattagaagttgcgcctgcat 4910650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 4709094 - 4708843
Alignment:
Q  15 tatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagggt 114  Q
    ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || | |||| |||||||| ||||    
T  4709094 tatgttggaaggcttcaaatctctatgcatgataggtggtttacatccattatgcagataatccaatcctgaaaattcacattaagggcaatgtacgggt 4708995  T
Q  115 acacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggatttt 214  Q
    ||| || | |||||| |||  | |  ||||||||||||||| || ||||  ||||| ||||||||||| |||| ||||||  ||||| | || | |||||    
T  4708994 acaaaatgcaagaaatatgacgccgaaaacaatacattaccatgggctgtgtcaacagcaatgttaagcctctgattccaacttaaggtatttgaatttt 4708895  T
Q  215 ccactgtatgcaaataggcattagtattgaaattctgaagaagtcttttaaa 266  Q
    | |||| ||||||| |  ||||||  ||||||| ||||| |||  |||||||    
T  4708894 ctactgcatgcaaacatacattagctttgaaatactgaacaagcattttaaa 4708843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 324 - 486
Target Start/End: Complemental strand, 4705976 - 4705819
Alignment:
Q  324 tgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaatttctatgatgaacga 423  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||| ||||||||||| ||| | ||||||||||||||||||||| |    
T  4705976 tgttggagatttccattggtcatgtattcgtaaatcaatgctttgatttgaccttcatcacaatatccaaggagagggaccaaatttctatgatgaacaa 4705877  T
Q  424 ccgttagaagttgtgcctgcatcaatatttaaattttatctctatcaaagttaactgtgaaat 486  Q
     |||||||||||||||||| ||     |||| |||| ||||||| ||||||||| ||||||||    
T  4705876 tcgttagaagttgtgcctgtat-----tttatatttgatctctaccaaagttaaatgtgaaat 4705819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 307 - 445
Target Start/End: Original strand, 4871416 - 4871554
Alignment:
Q  307 aattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaa 406  Q
    ||||||| ||||| |||||||||||| ||||||| | ||||||||||||||||||||||||| ||||  ||||||  |||||||||||||| ||||||||    
T  4871416 aattaccaaataagtgttgttggagacttccatttgtcatgtattcataaatcaatgctttgttttcatcttcatcgcaatatccaatgagagagaccaa 4871515  T
Q  407 atttctatgatgaacgaccgttagaagttgtgcctgcat 445  Q
    ||||||||||||||| | | |||||||||||||||||||    
T  4871516 atttctatgatgaacaatcattagaagttgtgcctgcat 4871554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 4898222 - 4898362
Alignment:
Q  305 ataattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagacc 404  Q
    ||||||||||| ||| |||| |||||||||||| ||||||||||||||||||| |||||||||| |||  ||||||| ||||||||||||||| ||||||    
T  4898222 ataattacctattaagtgttattggagatttcctttggccatgtattcataaaccaatgctttgcttttgccttcatcacaatatccaatgagagagacc 4898321  T
Q  405 aaatttctatgatgaacgaccgttagaagttgtgcctgcat 445  Q
    ||||||||||||||||| | | |||||||||  ||||||||    
T  4898322 aaatttctatgatgaacaatcattagaagttccgcctgcat 4898362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 309 - 445
Target Start/End: Complemental strand, 10449833 - 10449697
Alignment:
Q  309 ttacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaaat 408  Q
    ||||| ||||| |||||| ||||||||||||| |||||||||||||| ||||||||||| | ||| ||||||| ||||||||||| ||| |||||||||     
T  10449833 ttaccaaataagtgttgtaggagatttccattagccatgtattcatagatcaatgctttaacttcaccttcatcacaatatccaacgagagagaccaaac 10449734  T
Q  409 ttctatgatgaacgaccgttagaagttgtgcctgcat 445  Q
    ||||||||||||| | |||||||||||||||||||||    
T  10449733 ttctatgatgaacaatcgttagaagttgtgcctgcat 10449697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 4846736 - 4846964
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatcca----gactaagtgcaatgt 108  Q
    ||||||||||| |  |||||||||||||| |||||||||||||| || |||||||||||||| |||||||||||||| |||     | ||||||| ||||    
T  4846736 aatatgttggaagacttcaaatctctatgaataataggtggtttgcacccattatgcagataatccaatcctgaaaacccacaataattaagtgctatgt 4846835  T
Q  109 aagggtacacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcg 208  Q
    |||||||  | | | ||||||||| |||  ||||| | ||||||||| |||||||||||||||||||| |||||||||| | |||| |||| ||| || |    
T  4846836 aagggtaatctatgcaagaaagattttgcaataaatagtacattaccatgtgctgcatcaactgcaattttaagtctcttagtccaatttatgatatttg 4846935  T
Q  209 gattttccactgtatgcaaataggcatta 237  Q
     ||||||||||| ||| |||||| |||||    
T  4846936 aattttccactgcatgaaaatagacatta 4846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 4719276 - 4719097
Alignment:
Q  15 tatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaatgtaagggt 114  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | | |||| | |||| | || |    
T  4719276 tatgttggaaggcttcaaatctctatgcataataggtggtttacatccattatgcagataatccaatcctgaaaattaacattaagggaaatgcacggat 4719177  T
Q  115 acacaacggaagaaagatgttgtcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattcca 194  Q
    ||| || | |||||| | |  | || ||||||||||||||| || ||||  ||||||||||||||||| |||||||||||    
T  4719176 acaaaatgcaagaaatacgacgccaaaaacaatacattaccatgggctgtgtcaactgcaatgttaagcctctcattcca 4719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 4801855 - 4801969
Alignment:
Q  307 aattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaa 406  Q
    ||||||||||||| | |||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||     
T  4801855 aattacctaataaatattgttggagatttccattcgccatgtactcataaatcagtgctttgatttcaccttcatcacaatatccaatgagagagaccag 4801954  T
Q  407 atttctatgatgaac 421  Q
    ||| |||||||||||    
T  4801955 attcctatgatgaac 4801969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 4847160 - 4847274
Alignment:
Q  307 aattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagaccaa 406  Q
    ||||||||||||| | |||||||||||||||||| | |||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||    
T  4847160 aattacctaataaatattgttggagatttccattcgtcatgtactcataaatcagtgctttgatttcaccttcatcacaatatccaatgagagagaccaa 4847259  T
Q  407 atttctatgatgaac 421  Q
    ||| |||||||||||    
T  4847260 attcctatgatgaac 4847274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 21437138 - 21437278
Alignment:
Q  305 ataattacctaataattgttgttggagatttccattggccatgtattcataaatcaatgctttgatttccccttcattacaatatccaatgagggagacc 404  Q
    |||||||||||| || |||||||| | |||||| ||| |||||||||||||||||||||| ||  |||| ||||||| |||||| |||||||| ||||||    
T  21437138 ataattacctaacaagtgttgttgaacatttccgttgcccatgtattcataaatcaatgcctttttttcaccttcatcacaatacccaatgagagagacc 21437237  T
Q  405 aaatttctatgatgaacgaccgttagaagttgtgcctgcat 445  Q
    ||||||||||||||||| | | |||||||||| ||||||||    
T  21437238 aaatttctatgatgaacaatcattagaagttgcgcctgcat 21437278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 4791108 - 4791198
Alignment:
Q  15 tatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatccagactaagtgcaa 105  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||| || ||||||||    
T  4791108 tatgttggaaggcttcaaatctctatgcataataggtggtttacatccattatgtaaataatccaatcctgaaaatccacaccaagtgcaa 4791198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 4897799 - 4897879
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatcca 93  Q
    ||||||||||  || ||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  4897799 aatatgttggtaggcttcgaatctctatgcataataggtggattacatccattatgcagatattccaatcctgaaaatcca 4897879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 4910045 - 4910123
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatc 91  Q
    ||||||||||  || ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4910045 aatatgttggtaggcttcaaatctctgtgcataatagctggtttacatccattatgcagatattccaatcctgaaaatc 4910123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 21436694 - 21436757
Alignment:
Q  28 ttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatc 91  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  21436694 ttcaaatctctatgcataattgctggtttacatccattatgcagatattccaatcctgaaaatc 21436757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 4870126 - 4870203
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaat 90  Q
    ||||||||||| || |||| ||||||||||||||||||| | ||||| |||||||| |||||||||||||||||||||    
T  4870126 aatatgttggaaggcttcatatctctatgcataataggtagattacacccattatgaagatactccaatcctgaaaat 4870203  T

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Target: chr8; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 10450663 - 10450583
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatcca 93  Q
    ||||||||||  || |||||||| ||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||    
T  10450663 aatatgttggcaggcttcaaatccctatgcataatcggtggtttacatccatcatgtagatattccaatcctgaaaatcca 10450583  T

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Target: chr8; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 10455089 - 10455009
Alignment:
Q  13 aatatgttggacggtttcaaatctctatgcataataggtggtttacatccattatgcagatactccaatcctgaaaatcca 93  Q
    ||||||||||  || |||||||| ||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||||    
T  10455089 aatatgttggcaggcttcaaatccctatgcataatcggtggtttacatccatcatgtagatattccaatcctgaaaatcca 10455009  T

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Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 4791422 - 4791514
Alignment:
Q  137 tcataaacaatacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggattttccactgtatgcaaat 229  Q
    ||||||| | ||||||||| | ||||| ||||||||||||||| ||||||||| ||||||| ||||  || | ||||||||||| ||||||||    
T  4791422 tcataaatagtacattaccatatgctgtatcaactgcaatgttgagtctctcagtccagttcaagacatttgaattttccactgcatgcaaat 4791514  T

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Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 4870266 - 4870364
Alignment:
Q  150 attaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagatcttcggattttccactgtatgcaaataggcattagtattgaaatt 248  Q
    |||||| |||||||||||||||||||| || |||||||||||||| |||||||| |  | ||| ||  ||| | |||||||||||||| | ||||||||    
T  4870266 attaccatgtgctgcatcaactgcaattttgagtctctcattccattttaagatatgtgtattatcatctgcacgcaaataggcattaatcttgaaatt 4870364  T

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Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 4897936 - 4897988
Alignment:
Q  150 attaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaaga 202  Q
    |||||| |||||||||||||||||||| || |||||||||||||| |||||||    
T  4897936 attaccatgtgctgcatcaactgcaattttgagtctctcattccattttaaga 4897988  T

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Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 4910180 - 4910232
Alignment:
Q  148 acattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaa 200  Q
    |||||||| |||||||||||||||||||| || |||||||||||||| |||||    
T  4910180 acattaccatgtgctgcatcaactgcaatttttagtctctcattccattttaa 4910232  T

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Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 10450338 - 10450282
Alignment:
Q  147 tacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagat 203  Q
    ||||||||| |||||||||||||| ||||| || |||||||||||||| || |||||    
T  10450338 tacattaccatgtgctgcatcaaccgcaattttgagtctctcattccatttcaagat 10450282  T

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Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 10454764 - 10454708
Alignment:
Q  147 tacattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaagat 203  Q
    ||||||||| |||||||||||||| ||||| || |||||||||||||| || |||||    
T  10454764 tacattaccatgtgctgcatcaaccgcaattttgagtctctcattccatttcaagat 10454708  T

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Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 21436814 - 21436868
Alignment:
Q  148 acattaccgtgtgctgcatcaactgcaatgttaagtctctcattccagtttaaga 202  Q
    |||||||| | ||||||||||||||| || || |||||||||||||| |||||||    
T  21436814 acattaccatatgctgcatcaactgcgattttgagtctctcattccattttaaga 21436868  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 24000691 - 24000639
Alignment:
Q  25 ggtttcaaatctctatgcataataggtggtttacatccattatgcagatactc 77  Q
    |||||||||||||| || || |||| ||| || ||||||||||||||||||||    
T  24000691 ggtttcaaatctctgtggattatagctggcttgcatccattatgcagatactc 24000639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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