View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16077_low_3 (Length: 727)

Name: NF16077_low_3
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16077_low_3
NF16077_low_3
[»] chr1 (10 HSPs)
chr1 (15-710)||(34905614-34906309)
chr1 (207-685)||(34895301-34895776)
chr1 (17-187)||(34897062-34897236)
chr1 (415-627)||(34915640-34915854)
chr1 (207-522)||(34909222-34909526)
chr1 (22-193)||(39613154-39613328)
chr1 (22-107)||(43009025-43009110)
chr1 (582-685)||(34909598-34909701)
chr1 (60-152)||(32757822-32757916)
chr1 (109-147)||(28178833-28178871)
[»] chr4 (3 HSPs)
chr4 (66-193)||(29183104-29183234)
chr4 (38-154)||(15330056-15330171)
chr4 (60-154)||(32394180-32394276)
[»] chr2 (3 HSPs)
chr2 (72-187)||(32429897-32430016)
chr2 (97-154)||(45641708-45641765)
chr2 (109-154)||(38029600-38029645)
[»] chr5 (1 HSPs)
chr5 (109-154)||(28326234-28326279)
[»] chr3 (1 HSPs)
chr3 (60-154)||(39255314-39255408)
[»] chr8 (3 HSPs)
chr8 (42-154)||(8487589-8487700)
chr8 (65-193)||(27634487-27634610)
chr8 (38-88)||(20659414-20659464)


Alignment Details
Target: chr1 (Bit Score: 663; Significance: 0; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 663; E-Value: 0
Query Start/End: Original strand, 15 - 710
Target Start/End: Original strand, 34905614 - 34906309
Alignment:
Q  15 ggattggaacaataatcataaggttatacaaagttcataaaacttatatatatgcatataaaatagcattagtaagacagagaaaaccttaaaccacttg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34905614 ggattggaacaataatcataaggttatacaaagttcataaaacttatatatatgcatataaaatagcattagtaagacagagaaaaccttaaaccacttg 34905713  T
Q  115 aagtacttgtgtaattttaaattcataagcatagctcacaagataattaaaaccttaaatcacgcttcaaatacttataagtttaaactttaaattatca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34905714 aagtacttgtgtaattttaaattcataagcatagctcacaagataattaaaaccttaaatcacgcttcaaatacttataagtttaaactttaaattatca 34905813  T
Q  215 aattattcaatttttaaaattaataaagaatgcacctttatctcccaaatgatagtcctcccatcttagctcctcatggcttttatctttgtaaacaggc 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34905814 aattattcaatttttaaaattaataaagaatgcacctttatctcccaaatgatagtcctcccatcttagctcctcatggcttttatctttgtaaacaggc 34905913  T
Q  315 atggctgatattgactccaactttgccgtatgtccagaggcaccactatccgcttccactgtagccgagtaactagctattctacttccaccccgttgtc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34905914 atggctgatattgactccaactttgccgtatgtccagaggcaccactatccgcttccactgtagccgagtaactagctattctacttccaccccgttgtc 34906013  T
Q  415 ctccaaatcctgactgcccaataccagtacttccaaatgcttgagtgggagtctgtgatcctgcataagaaaatatgaaaaatcactctcaattacaatg 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34906014 ctccaaatcctgactgcccaataccagtacttccaaatgcttgagtgggagtctgtgatcctgcataagaaaatatgaaaaatcactctcaattacaatg 34906113  T
Q  515 acataagatacnnnnnnntgcataattattcaagtcccttacatcttaaaaattgacattatcgtagagaagataaaattctaaaaactattgaactaat 614  Q
    |||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34906114 acataaaatacaaaaaaatgcataattattcaagtcccttacatcttaaaaattgacattatcgtagagaagataaaattctaaaaactattgaactaac 34906213  T
Q  615 caaatgcagaactctgacctccaaaagcagaggtcgtactcccaaatgggctgctggtgccaaatgcagaaagtgttccaaatgggtctgtaatgg 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34906214 caaatgcagaactctgacctccaaaagcagaggtcgtactcccaaatgggctgttggtgccaaatgcagaaagtgttccaaatgggtctgtaatgg 34906309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 207 - 685
Target Start/End: Original strand, 34895301 - 34895776
Alignment:
Q  207 aattatcaaattattcaatttttaaaattaataaagaatgcacctttatctcccaaatgatagtcctcccatcttagctcctcatggcttttatctttgt 306  Q
    ||||||||||||||| ||||||||||||    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  34895301 aattatcaaattatttaatttttaaaat----aaagaatgcacctttatctcccaattgatagtcctcccatcttagctcctcgtggcttttatctttgt 34895396  T
Q  307 aaacaggcatggctgatattgactccaactttgccgtatgtccagaggcaccactatccgcttccactgtagccgagtaactagctattctacttccacc 406  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  34895397 aaacaggcatggctgatattgactccaactttgcagtctgtccagaggtgccactatctgcttccactgtagctgagtaactagctattctacttccacc 34895496  T
Q  407 ccgttgtcctccaaatcctgactgcccaataccagtacttccaaatgcttgagtgggagtctgtgatcctgcataagaaaatatg-aaaaatcactctca 505  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  34895497 ccgttgacctccaaatcctgactgcccaataccagtacttccaaatgcttgagttggagtctgtgatcctgcataagaaaatatgaaaaaatcactctca 34895596  T
Q  506 attacaatgacataagatac-nnnnnnntgcataattattcaagtcccttacatcttaaaaattgacattatcgtagagaagataaaattctaaaaacta 604  Q
    |||||||||||||  |||||        | |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  34895597 attacaatgacatgtgatacaaaaaaaatacataattattcaagtcccttacatcttaaaaattgaca-tatcacagagaagataaaattctaaaaacta 34895695  T
Q  605 ttgaactaatcaaatgcagaactctgacctccaaaagcagaggtcgtactcccaaatgggctgctggtgccaaatgcagaa 685  Q
    ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34895696 ttgaactcaccaaatgcagaactctgacctacaaaagcagaggtcgtactcccaaatgggctgctggtgccaaatgcagaa 34895776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 34897062 - 34897236
Alignment:
Q  17 attggaacaataatcataaggttatacaaagttcataaaacttatatatatgcatataaaatagcattagtaagacagagaaaaccttaaaccacttgaa 116  Q
    |||| ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  34897062 attgtaacaataatcacaagactatacaaagttcataaaacttatatatatgcatataaaacagcattagtaagacaaagaaaaccttaaatcacttgaa 34897161  T
Q  117 gtacttgtgtaattttaaattcataagcatagctcac----aagataattaaaaccttaaatcacgcttcaaata 187  Q
    |||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  34897162 gtacttgtgtaattttaaattcgtaagcatagctcacaagtaagataattaaaaccttaaatcacgcttcaaata 34897236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 415 - 627
Target Start/End: Original strand, 34915640 - 34915854
Alignment:
Q  415 ctccaaatcctgactgcccaataccagtacttccaaatgcttgagtgggagtctgtgatcctgcataagaaaatatgaaaa-atcactctcaattacaat 513  Q
    |||||||||| |||||||||||||||||| |||||||  |  ||| |||||||||||||||||||  ||| |||||||||| ||||||||||||||||||    
T  34915640 ctccaaatcccgactgcccaataccagtatttccaaaaaccggagcgggagtctgtgatcctgcacgagacaatatgaaaagatcactctcaattacaat 34915739  T
Q  514 gacataagatacnnnnnnn-tgcataattattcaagtcccttacatcttaaaaattgacattatcgtagagaagataaaattctaaaaactattgaacta 612  Q
    ||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  34915740 gacataagatacaaaaaaaatgcataattattcaagtcctttacatcttaaaaattgacattatcgtagagaagataaaattataaaaactattgaattc 34915839  T
Q  613 atcaaatgcagaact 627  Q
    | |||||||||||||    
T  34915840 accaaatgcagaact 34915854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 207 - 522
Target Start/End: Original strand, 34909222 - 34909526
Alignment:
Q  207 aattatcaaattattcaatttttaaaattaataaagaatgcacctttatctcccaaatgatagtcctcccatcttagctcctcatggcttttatctttgt 306  Q
    ||||||||||||||| |   |||| |||||| |||  ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34909222 aattatcaaattattta---tttataattaaaaaaagatgtacctttatctcccaattgatagtcttcccatcttagctcctcatggcttttatctttgt 34909318  T
Q  307 aaacaggcatggctgatattgactccaactttgccgtatgtccagaggcaccactatccgcttccactgtagccgagtaactagctattctacttccacc 406  Q
    ||||||||||| |||||||||||||||| |||        || ||| |  |||| ||  |||||   |||||| ||||||||||||| ||||||||||||    
T  34909319 aaacaggcatgactgatattgactccaatttt--------tcaagacg-tccacaatttgcttcagttgtagctgagtaactagctactctacttccacc 34909409  T
Q  407 ccgttgtcctccaaatcctgactgcccaataccagtacttccaaatgcttgagtgggagtctgtgatcctgcataagaaaatatgaaaa-atcactctca 505  Q
     ||||||||||||||||| |||||||||||| ||| | |||||||  |  |||  ||||| || |||||||||  ||| |||||||||| |||| |||||    
T  34909410 tcgttgtcctccaaatcccgactgcccaatatcagcatttccaaaacccggagcaggagtatgcgatcctgcacgagacaatatgaaaagatcagtctca 34909509  T
Q  506 attacaatgacataaga 522  Q
    ||||||||| |||||||    
T  34909510 attacaatggcataaga 34909526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 22 - 193
Target Start/End: Complemental strand, 39613328 - 39613154
Alignment:
Q  22 aacaataatcataaggttatacaaagttcataaaacttatata-tatgcatataaaatagcattagtaagacagagaaaaccttaaaccacttgaagtac 120  Q
    |||| ||||| |||| ||||||||   |||||||||||||| | ||||| ||||||||||||||||||| |  |||||||||||||| ||||| || |||    
T  39613328 aacactaatcgtaagattatacaatactcataaaacttatacaatatgcctataaaatagcattagtaaaa--gagaaaaccttaaatcacttaaaatac 39613231  T
Q  121 ttgtgtaattttaaattcataagcatagctcac----aagataattaaaaccttaaatcacgcttcaaatacttata 193  Q
    |||||||| |||| |||||||| ||||||||||    ||||| |||||||||||||||||| |||||||| ||||||    
T  39613230 ttgtgtaaatttatattcataaccatagctcacaggtaagatgattaaaaccttaaatcacacttcaaatgcttata 39613154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 43009025 - 43009110
Alignment:
Q  22 aacaataatcataaggttatacaaagttcataaaacttatatatatgcatataaaatagcattagtaagacagagaaaaccttaaa 107  Q
    |||| ||||| |||| |||| |||| ||||||||||| | ||||||||||||||||| |||| ||||||||| |||||||||||||    
T  43009025 aacactaatcgtaagattatgcaaaattcataaaactcaaatatatgcatataaaattgcatgagtaagacaaagaaaaccttaaa 43009110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 582 - 685
Target Start/End: Original strand, 34909598 - 34909701
Alignment:
Q  582 agaagataaaattctaaaaactattgaactaatcaaatgcagaactctgacctccaaaagcagaggtcgtactcccaaatgggctgctggtgccaaatgc 681  Q
    |||||||||||| ||||||||||||||| | | |||||  |||||||||||||||| | |  ||||| |||| |||||||| |||| |||| ||||||||    
T  34909598 agaagataaaatcctaaaaactattgaaatcaccaaatatagaactctgacctccataggttgaggttgtacgcccaaatgtgctgttggtaccaaatgc 34909697  T
Q  682 agaa 685  Q
    ||||    
T  34909698 agaa 34909701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 32757822 - 32757916
Alignment:
Q  60 atatatatgcatataaaatagcattagtaagacagagaaaaccttaaa--ccacttgaagtacttgtgtaattttaaattcataagcatagctca 152  Q
    |||||||||| ||||||||||||| | ||| ||| |  ||| ||||||   |||||||| ||||||||||| |||||||||||||||||||||||    
T  32757822 atatatatgcttataaaatagcataactaaaacaaaagaaaacttaaatcacacttgaaatacttgtgtaaatttaaattcataagcatagctca 32757916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 28178871 - 28178833
Alignment:
Q  109 cacttgaagtacttgtgtaattttaaattcataagcata 147  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  28178871 cacttgaaatacttgtgtaaatttaaattcataagcata 28178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 5e-27; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 29183234 - 29183104
Alignment:
Q  66 atgcatataaaatagcattagtaagacagagaaaaccttaaaccacttgaagtacttgtgtaattttaaattcataagcatagctcac----aagataat 161  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| |||||||| ||||||||||| |||||||||||||  ||||||| |    |||||| |    
T  29183234 atgcatataaaatagcattagtgagacaaagaaaacattaaatcacttgaaatacttgtgtaaatttaaattcataa-aatagctctcatttaagatagt 29183136  T
Q  162 taaaaccttaaatcacgcttcaaatacttata 193  Q
    |||||||||||||||| ||| |||||||||||    
T  29183135 taaaaccttaaatcacactttaaatacttata 29183104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 15330171 - 15330056
Alignment:
Q  38 ttatacaaagttcataaaacttatatatatgcatataaaatagcattagtaagacagagaaaaccttaaa--ccacttgaagtacttgtgtaattttaaa 135  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||  ||||||||   ||||||||| |   | |||||| | ||||||||| ||||||    
T  15330171 ttatacaaaattcataaaactcaaatatatgcatataaaatagcataggtaagaca---aaaaccttatattactcttgaaatgcttgtgtaaatttaaa 15330075  T
Q  136 ttcataagcatagctcaca 154  Q
    ||| |||||||| ||||||    
T  15330074 ttcgtaagcataactcaca 15330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 32394180 - 32394276
Alignment:
Q  60 atatatatgcatataaaatagcattagtaagacagagaaaaccttaaac--cacttgaagtacttgtgtaattttaaattcataagcatagctcaca 154  Q
    ||||| |||| |||||||||||||  |||||| | | |||||||| ||   |||||||| ||||||| ||| |||||||||||||||||| ||||||    
T  32394180 atatacatgcgtataaaatagcataggtaagataaaaaaaacctttaattacacttgaaatacttgtataaatttaaattcataagcataactcaca 32394276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 8e-20; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 32430016 - 32429897
Alignment:
Q  72 ataaaatagcattagtaagacagagaaaaccttaaaccacttgaagtacttgtgtaattttaaattcataagcatagctcacaaga----taattaaaac 167  Q
    |||||||||||||||||||||| ||||||||||||| | |||||| |||||||| || |  ||||||| ||||||||||||||||     ||||||||||    
T  32430016 ataaaatagcattagtaagacaaagaaaaccttaaatctcttgaaatacttgtgcaaataaaaattcacaagcatagctcacaagtaaggtaattaaaac 32429917  T
Q  168 cttaaatcacgcttcaaata 187  Q
    ||||| |||| ||| |||||    
T  32429916 cttaagtcacacttgaaata 32429897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 45641708 - 45641765
Alignment:
Q  97 aaaaccttaaaccacttgaagtacttgtgtaattttaaattcataagcatagctcaca 154  Q
    ||||||||||  |||||||| ||||| ||||| |||||||||||||||||||||||||    
T  45641708 aaaaccttaacacacttgaaatacttatgtaaatttaaattcataagcatagctcaca 45641765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 38029645 - 38029600
Alignment:
Q  109 cacttgaagtacttgtgtaattttaaattcataagcatagctcaca 154  Q
    ||||| || ||||||||||| |||||||||||||||||| ||||||    
T  38029645 cacttaaaatacttgtgtaaatttaaattcataagcataactcaca 38029600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 28326279 - 28326234
Alignment:
Q  109 cacttgaagtacttgtgtaattttaaattcataagcatagctcaca 154  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||    
T  28326279 cacttgaaatacttgtgtaaatttaaattcataagcatagctcaca 28326234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 39255314 - 39255408
Alignment:
Q  60 atatatatgcatataaaatagcattagtaagacagagaaaaccttaaac--cacttgaagtacttgtgtaattttaaattcataagcatagctcaca 154  Q
    ||||| ||||||||||||||||||  |||||| | |  ||||||||||   |||||||| ||||||||||| |||||||||| ||||||| ||||||    
T  39255314 atatacatgcatataaaatagcataggtaagataaa--aaaccttaaagtacacttgaaatacttgtgtaaatttaaattcagaagcataactcaca 39255408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 8487700 - 8487589
Alignment:
Q  42 acaaagttcataaaacttatatatatgcatataaaatagcattagtaagacagagaaaaccttaaac--cacttgaagtacttgtgtaattttaaattca 139  Q
    ||||| ||||||||| | | ||||||||||||||| || |||  |||||||| |  ||||||||||   |||||||| ||||||||||| ||||||||||    
T  8487700 acaaaattcataaaattcaaatatatgcatataaa-tatcataggtaagacaaa--aaaccttaaattacacttgaaatacttgtgtaaatttaaattca 8487604  T
Q  140 taagcatagctcaca 154  Q
    |||||| | ||||||    
T  8487603 taagcagaactcaca 8487589  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 27634610 - 27634487
Alignment:
Q  65 tatgcatataaaatagcattagtaagacagagaaaaccttaaaccacttgaagtacttgtgtaattttaaattcataagcatagctca----caagataa 160  Q
    ||||||||||||||||||||||||  | | |||||||||||||          ||||||||||| ||||| |||||||||||||| ||     |||||||    
T  27634610 tatgcatataaaatagcattagtacaataaagaaaaccttaaaa---------tacttgtgtaaatttaacttcataagcatagcacataagtaagataa 27634520  T
Q  161 ttaaaaccttaaatcacgcttcaaatacttata 193  Q
    ||||||||| |||||||  |||||||| |||||    
T  27634519 ttaaaacctcaaatcacatttcaaatagttata 27634487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 20659414 - 20659464
Alignment:
Q  38 ttatacaaagttcataaaacttatatatatgcatataaaatagcattagta 88  Q
    |||||| || ||||||||||| | |||||||||||||||||||||| ||||    
T  20659414 ttatacgaaattcataaaactcaaatatatgcatataaaatagcataagta 20659464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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