View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16077_low_32 (Length: 425)
Name: NF16077_low_32
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_low_32 |
 |  |
|
| [»] scaffold0180 (1 HSPs) |
 |  |  |
|
| [»] scaffold0155 (1 HSPs) |
 |  |  |
|
| [»] scaffold0508 (2 HSPs) |
 |  |  |
|
| [»] scaffold0022 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 341; Significance: 0; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 15 - 404
Target Start/End: Complemental strand, 14488329 - 14487940
Alignment:
| Q |
15 |
caaagggtataaaaaatcatagaaacaaagatgaagaacaaaggttttctagatttccatacctgagnnnnnnntcattgcaggcgatgttagacgatca |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
14488329 |
caaagggtataaaaaatcatagaaacaaagatgaagaacaaaggttttctagatttccatacctgagaaaaaaatcattgcaggcgatgttagactgtca |
14488230 |
T |
 |
| Q |
115 |
acaactattttatttgtggtgtgtgagactttcttgttttttattccattttaaagaaattaaattaacaatgaaaaagtacaaacaagggaagaaggag |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14488229 |
acaactattttatttgtggtgtgtgagactttcttgttttttattctattttaaagaaattaaattaacaatgaaaaagtacaaacaagggaagaaggag |
14488130 |
T |
 |
| Q |
215 |
aattcgggaatgtcaatcctatgttgttgctcatggaggtgagtgggatggaggagagagaatgataattgaagatggtgtgtaaaaagatatagtgtag |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14488129 |
aattcgggaatgtcaatcctatgttgttgctcatggaggtgagtgggatggaggagagagaatgataattgatgatggtgtgtaaaaagatatagtgtag |
14488030 |
T |
 |
| Q |
315 |
agagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttcccatact |
404 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14488029 |
agagactatgataaaagtgtgttccataatcaatctaatggttaaaaagtaactttcccataatgggaaaaaagatccctttcccatact |
14487940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 7994122 - 7994082
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7994122 |
gatctaatggttaaaaactaactttcccatgatgggaaaaa |
7994082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 37996564 - 37996604
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37996564 |
gatctaatggttaaaaactaactttcccatgatgggaaaaa |
37996604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 16903878 - 16903918
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
16903878 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
16903918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 30899457 - 30899417
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
30899457 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
30899417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 401
Target Start/End: Complemental strand, 36391106 - 36390970
Alignment:
| Q |
262 |
atggaggagagagaatgataattgaagatggtgtgtaaaaagatatagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaa |
361 |
Q |
| |
|
|||||||||||||| |||| | |||||| ||||| ||||| | |||||| |||||| || ||| ||| |||||||| | | |||||||||||||||| |
|
|
| T |
36391106 |
atggaggagagagagtgatggtagaagatagtgtggaaaaa--tctagtgttgagagaataggattaaaatgtgttcctcatttgatctaatggttaaaa |
36391009 |
T |
 |
| Q |
362 |
aataactttcccatgatgggaaaaaagatccctttcccat |
401 |
Q |
| |
|
|| |||||||||| ||||||| || |||||||||||| |
|
|
| T |
36391008 |
ttta-ctttcccatggtgggaaacaacttccctttcccat |
36390970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 6610025 - 6610064
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
6610025 |
atctaatggttaaaaactaactttcccatggtgggaaaaa |
6610064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Original strand, 15562022 - 15562061
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
15562022 |
atctaatggttaaaaactaactttcccatggtgggaaaaa |
15562061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 400
Target Start/End: Complemental strand, 40992319 - 40992236
Alignment:
| Q |
317 |
agactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttccca |
400 |
Q |
| |
|
|||| ||||||||| |||||||| || | ||| |||||||||||| ||||||||||||| | |||||||| | ||||||||| |
|
|
| T |
40992319 |
agaccatgataaaattgtgttccctatttaatcaaatggttaaaaactaactttcccatggtaggaaaaaacaaacctttccca |
40992236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 3705404 - 3705362
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
3705404 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
3705362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 30545417 - 30545469
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttccca |
400 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| || ||||||||||| |
|
|
| T |
30545417 |
atctaatggttaaaaaa-aactttcccatcatgggaaacaacttccctttccca |
30545469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 384
Target Start/End: Original strand, 36476696 - 36476764
Alignment:
| Q |
315 |
agagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaa |
384 |
Q |
| |
|
|||||||||||||||| |||||||| || | |||||||||| || ||| | |||||||||||||||||| |
|
|
| T |
36476696 |
agagactatgataaaattgtgttccttatttaatctaatggtcaagaaa-atctttcccatgatgggaaa |
36476764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 41519918 - 41519963
Alignment:
| Q |
359 |
aaaaataactttcccatgatgggaaaaaagatccctttcccatact |
404 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
41519918 |
aaaaaaaactttcccatggtgggaaaaaacttccctttcccatact |
41519963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 7994554 - 7994594
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
7994554 |
gatctaatggttaaaaactaactttcccatggtggaaaaaa |
7994594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 15561608 - 15561568
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
15561608 |
gatctaatggttaaaaactaactttccaatggtgggaaaaa |
15561568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 16903465 - 16903425
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||||||||| |
|
|
| T |
16903465 |
gatctaatggttaaaaactaacttttccatggtgggaaaaa |
16903425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 117 - 397
Target Start/End: Complemental strand, 573669 - 573398
Alignment:
| Q |
117 |
aactattttatttgtggtgtgtgagactttcttgttttttattccattttaaagaaattaaattaacaatgaaaaagtacaaacaagggaagaaggagaa |
216 |
Q |
| |
|
||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
573669 |
aactattttatctgtggtatgtggaactttcttgttttttattttattttaaagaaattaaattaacaatgaaaa-gtacaaacaagggaagaagtagaa |
573571 |
T |
 |
| Q |
217 |
ttcgggaatgtcaatcctatgttgttgctcatggaggtgagtgggatggaggagagagaatgataattgaagatggtgtgtaaaaagatatagtgtagag |
316 |
Q |
| |
|
|| |||| || | ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||| |||||||||| || |
|
|
| T |
573570 |
tttgggacagttga------gttgttgctcatggaggtgagtgagatggaggggagagaatgataattgatgatg-tgtgtaaaaa-atatagtgtaaag |
573479 |
T |
 |
| Q |
317 |
agactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttc |
397 |
Q |
| |
|
|||||||||||||| |||||| | || | |||||||||||||||||||||||| ||||||| |||||||||||| ||||| |
|
|
| T |
573478 |
agactatgataaaaatgtgtttcttagttgatctaatggttaaaaaataacttgtccatgataggaaaaaagatcactttc |
573398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 573830 - 573776
Alignment:
| Q |
21 |
gtataaaaaatcatagaaacaaagatgaagaacaaaggttttctagatttccata |
75 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
573830 |
gtatagaaaatcggagaaacaaagatgaagaacaaagggtttctagatttccata |
573776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 573728 - 573676
Alignment:
| Q |
23 |
ataaaaaatcatagaaacaaagatgaagaacaaag-gttttctagatttccata |
75 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
573728 |
ataaaaaatcatagaaacaaagatgaagaacaaagagttttc-agatttccata |
573676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 48594206 - 48594248
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
48594206 |
gatctaatggtcaaaaactaactttcccatgatgggaaaaaag |
48594248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 48598817 - 48598859
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
48598817 |
gatctaatggtcaaaaactaactttcccatgatgggaaaaaag |
48598859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 38328867 - 38328907
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
38328867 |
gatctaatgattaaaaactaactttcccatgatgggaaaaa |
38328907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 43755916 - 43755876
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
43755916 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
43755876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 49611501 - 49611581
Alignment:
| Q |
307 |
tagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||||| ||||||| ||| ||||| |||||||| || | ||||||||| ||||| ||| |||||||||||||||||||| |
|
|
| T |
49611501 |
tagtgttgagagaccatggtaaaattgtgttccctatttaatctaatggccaaaaactaattttcccatgatgggaaaaaa |
49611581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 2821025 - 2820983
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
2821025 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
2820983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 2821470 - 2821512
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
2821470 |
gatctaatggtcaaaaattaactttcccatggtgggaaaaaag |
2821512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 12800451 - 12800493
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
12800451 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
12800493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 28371684 - 28371726
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
28371684 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
28371726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 32537712 - 32537672
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
32537712 |
gatccaatggttaaaaactaactttcccatggtgggaaaaa |
32537672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 38468969 - 38468933
Alignment:
| Q |
350 |
taatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
38468969 |
taatggttaaaaactaactttcccatggtgggaaaaa |
38468933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 38469266 - 38469306
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
38469266 |
gatctaatggttaaaaactaactttcccatggtggaaaaaa |
38469306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 46357992 - 46357952
Alignment:
| Q |
298 |
aaaaagatatagtgtagagagactatgataaaagtgtgttc |
338 |
Q |
| |
|
||||| |||| || ||||||||||||||||||||||||||| |
|
|
| T |
46357992 |
aaaaaaatatggtatagagagactatgataaaagtgtgttc |
46357952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 115; Significance: 3e-58; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 142 - 379
Target Start/End: Complemental strand, 49244828 - 49244600
Alignment:
| Q |
142 |
actttcttgttttttattccattttaaagaaattaaattaacaatgaaaaagtacaaacaagggaagaaggagaattcgggaatgtcaatcctatgttgt |
241 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| || | ||||| |
|
|
| T |
49244828 |
actttcttgttttttattttattttaaagaaattaaattaacaatgaaaa-gtacaaacaagggaagaaatagaatttgggaccgtgga------gttgt |
49244736 |
T |
 |
| Q |
242 |
tgctcatggaggtgagtgggatggaggagagagaatgataattgaagatggtgtgtaaaaagatatagtgtagagagactatgataaaagtgtgttccat |
341 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
49244735 |
tgctcatggaggtgagtgggatggaggggagggaatgataattgatgatg-tgtgtaaaaa-atatagtgtagagagactatgataaaagcgtgttcctt |
49244638 |
T |
 |
| Q |
342 |
aatcgatctaatggttaaaaaataactttcccatgatg |
379 |
Q |
| |
|
| | ||||||||||||||||||||| || |||||||| |
|
|
| T |
49244637 |
agttgatctaatggttaaaaaataatttgtccatgatg |
49244600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 5113265 - 5113225
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
5113265 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
5113225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 20586139 - 20586099
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
20586139 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
20586099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 20586565 - 20586605
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
20586565 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
20586605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 24394715 - 24394755
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
24394715 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
24394755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 26006213 - 26006173
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
26006213 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
26006173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 36992154 - 36992194
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
36992154 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
36992194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 37017594 - 37017634
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
37017594 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
37017634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 43104758 - 43104798
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
43104758 |
gatctaatggttaaaaactaactttcccattatgggaaaaa |
43104798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 45000808 - 45000848
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
45000808 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
45000848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 49244884 - 49244844
Alignment:
| Q |
35 |
agaaacaaagatgaagaacaaaggttttctagatttccata |
75 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
49244884 |
agaaacaaagatgaagaacaaagggtttccagatttccata |
49244844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 929978 - 929936
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
929978 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
929936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 930414 - 930456
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
930414 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
930456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 384
Target Start/End: Original strand, 5113689 - 5113727
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaa |
384 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
5113689 |
gatctaatggttaaaaactaactttcccatggtgggaaa |
5113727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 11442136 - 11442178
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
11442136 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
11442178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 14788581 - 14788623
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| ||||||||| |
|
|
| T |
14788581 |
gatctaatggtcaaaaactaactttcccatgataggaaaaaag |
14788623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 32474443 - 32474485
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
32474443 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
32474485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 42258042 - 42258084
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||| ||||||||||||||| |
|
|
| T |
42258042 |
gatctaatggtcaaaaactaactttccaatgatgggaaaaaag |
42258084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 43521144 - 43521102
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
43521144 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
43521102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 384
Target Start/End: Complemental strand, 45297616 - 45297579
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaa |
384 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
45297616 |
gatctaatggttaaaaaa-aactttcccatgatgggaaa |
45297579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 46719761 - 46719688
Alignment:
| Q |
314 |
gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||| ||| ||||| |||||||| || | ||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
46719761 |
gagagaccatggtaaaattgtgttccctatttaatctaatggccaaaaactaactttcccatgatgagaaaaaa |
46719688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 8326549 - 8326509
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||| |||| | |||||||||||||||||||| |
|
|
| T |
8326549 |
gatctaatggttagaaaaaagctttcccatgatgggaaaaa |
8326509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 26006759 - 26006799
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
26006759 |
gatctaatggtcaaaaactaactttctcatgatgggaaaaa |
26006799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 45000382 - 45000342
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
45000382 |
gatctaatggttaaaaactaactttcccatagtgggaaaaa |
45000342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0180
Description:
Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 23033 - 23113
Alignment:
| Q |
307 |
tagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||||| ||||||| ||||||||| | |||||| || | ||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
23033 |
tagtgttgagagaccatgataaaattatgttccctatttaatctaatggttcaaaactaactttcccatgatgggaaaaaa |
23113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0155 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0155
Description:
Target: scaffold0155; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 17436 - 17366
Alignment:
| Q |
317 |
agactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||| ||||||||| |||||||| || | |||| |||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
17436 |
agaccatgataaaattgtgttccctatttgatcaaatggttaaaaactaactttcccatggtgggaaaaaa |
17366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 24027667 - 24027707
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24027667 |
gatctaatggttaaaaactaactttcccatgatgggaaaaa |
24027707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 3595844 - 3595804
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
3595844 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
3595804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 7858394 - 7858354
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
7858394 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
7858354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 8321368 - 8321408
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
8321368 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
8321408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 12330215 - 12330175
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
12330215 |
gatctaatggttaaaaattaactttcccatggtgggaaaaa |
12330175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 12330643 - 12330683
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
12330643 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
12330683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 8320941 - 8320902
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
8320941 |
atctaatggttaaaaactaactttcccatggtgggaaaaa |
8320902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 33283264 - 33283192
Alignment:
| Q |
314 |
gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||||| |||||||||| |||||||| | | ||||||||||| |||||| | |||||||||||||||| |||| |
|
|
| T |
33283264 |
gagagagtatgataaaaatgtgttcctcatttgatctaatggtcaaaaaa-acctttcccatgatgggataaaa |
33283192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 3596274 - 3596314
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
3596274 |
gatctaatggttaaaaactaattttcccatggtgggaaaaa |
3596314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 35106940 - 35106900
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
35106940 |
gatctgatgcttaaaaaataactttcccatgataggaaaaa |
35106900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 400
Target Start/End: Original strand, 41224794 - 41224877
Alignment:
| Q |
317 |
agactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttccca |
400 |
Q |
| |
|
|||| ||||||||| |||||||| || | ||| |||||||||||| ||||||||||||| |||||||||| | ||||||||| |
|
|
| T |
41224794 |
agaccatgataaaattgtgttccctatttaatcaaatggttaaaaactaactttcccatggtgggaaaaaataagcctttccca |
41224877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 29006414 - 29006361
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttccca |
400 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||| | ||||||||| |
|
|
| T |
29006414 |
atctaatggttaaaaactaactttcccatggtgggaaaaaacaagcctttccca |
29006361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 29007180 - 29007233
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttccca |
400 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||| | ||||||||| |
|
|
| T |
29007180 |
atctaatggttaaaaactaactttcccatggtgggaaaaaacaagcctttccca |
29007233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 44896146 - 44896073
Alignment:
| Q |
314 |
gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||| ||||||||| ||||| || || | |||||||||||||||| ||||||||||||| |||| ||||| |
|
|
| T |
44896146 |
gagagaccatgataaaattgtgtaccctatttaatctaatggttaaaaactaactttcccatggtggggaaaaa |
44896073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 25137479 - 25137439
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
25137479 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
25137439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 30414248 - 30414208
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
30414248 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
30414208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 29314678 - 29314608
Alignment:
| Q |
317 |
agactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||| ||||||||| |||||||| || | ||| |||||||||||| ||||||||||||| ||| |||||| |
|
|
| T |
29314678 |
agaccatgataaaattgtgttccctatttaatcaaatggttaaaaactaactttcccatggtggaaaaaaa |
29314608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 33140275 - 33140317
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
33140275 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
33140317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 387
Target Start/End: Original strand, 42901117 - 42901158
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
42901117 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaa |
42901158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 4180319 - 4180359
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
4180319 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaa |
4180359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 20560262 - 20560302
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
20560262 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaa |
20560302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 25137906 - 25137946
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
25137906 |
gatctaatggttaaaaactaattttcccatggtgggaaaaa |
25137946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 35759187 - 35759260
Alignment:
| Q |
314 |
gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||| ||||||||| ||||| || || | |||||||||||||||| ||||||||||||| |||| ||||| |
|
|
| T |
35759187 |
gagagaccatgataaaattgtgtaccctatttaatctaatggttaaaaactaactttcccatggtggggaaaaa |
35759260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 41348244 - 41348171
Alignment:
| Q |
314 |
gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||| ||||||||| ||||| || || | |||||||||||||||| ||||||||||||| |||| ||||| |
|
|
| T |
41348244 |
gagagaccatgataaaattgtgtaccctatttaatctaatggttaaaaactaactttcccatggtggggaaaaa |
41348171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 400
Target Start/End: Complemental strand, 41092269 - 41092186
Alignment:
| Q |
317 |
agactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaagatccctttccca |
400 |
Q |
| |
|
|||| ||||||||| |||||||| || | ||| |||||||||||| ||||||| ||||| |||||||||| | ||||||||| |
|
|
| T |
41092269 |
agaccatgataaaattgtgttccctatttaatcaaatggttaaaaactaacttttccatggtgggaaaaaacaagcctttccca |
41092186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 14197726 - 14197684
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
14197726 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
14197684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 30846083 - 30846043
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| ||||||||| |
|
|
| T |
30846083 |
gatctaatggttaaaaactaactttcctatggtgggaaaaa |
30846043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 387
Target Start/End: Original strand, 52758658 - 52758731
Alignment:
| Q |
314 |
gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||||||| ||||| |||||||| || | ||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
52758658 |
gagagactatggtaaaattgtgttccctatttaatctaatggccaaaaactaactttcccatgatgagaaaaaa |
52758731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 5235441 - 5235401
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
5235441 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
5235401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 20175037 - 20174997
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
20175037 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
20174997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 39412832 - 39412792
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39412832 |
gatccaatggttaaaaactaactttcccatgatgggaaaaa |
39412792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 11680390 - 11680303
Alignment:
| Q |
300 |
aaagatatagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||||| ||||| ||||||| || |||| | |||||||| || | |||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
11680390 |
aaagatctagtgctgagagaccataataacattgtgttccctatttaatctaatggtcaaaaactaactttcccatggtgggaaaaaa |
11680303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 387
Target Start/End: Complemental strand, 11688669 - 11688582
Alignment:
| Q |
300 |
aaagatatagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||||| ||||| ||||||| || |||| | |||||||| || | |||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
11688669 |
aaagatctagtgctgagagaccataataacattgtgttccctatttaatctaatggtcaaaaactaactttcccatggtgggaaaaaa |
11688582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 387
Target Start/End: Complemental strand, 19860397 - 19860356
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
19860397 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaa |
19860356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 31910618 - 31910581
Alignment:
| Q |
350 |
taatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
31910618 |
taatggttaaaaactaactttcccatggtgggaaaaaa |
31910581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 39413542 - 39413642
Alignment:
| Q |
285 |
gaagatggtgtgtaaaaagatatagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaa |
384 |
Q |
| |
|
||||||| |||| ||||| || |||||| ||||||| ||||||||| | ||||| || | ||| |||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
39413542 |
gaagatgatgtggaaaaa-atttagtgtcgagagaccatgataaaattatgttctctacttaatccaatggttaaaaactaactttcctatggtgggaaa |
39413640 |
T |
 |
| Q |
385 |
aa |
386 |
Q |
| |
|
|| |
|
|
| T |
39413641 |
aa |
39413642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 53289572 - 53289499
Alignment:
| Q |
315 |
agagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
|||||| ||||||||| ||||| || || | |||||||| ||||||| ||||||||||||| |||| |||||| |
|
|
| T |
53289572 |
agagaccatgataaaattgtgtaccctatttaatctaatgattaaaaattaactttcccatgttggggaaaaag |
53289499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 6933888 - 6933848
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
6933888 |
gatctaatggttaaaaactaacttttccatgatggaaaaaa |
6933848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 6934483 - 6934523
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||| ||||| |
|
|
| T |
6934483 |
gatctaatggttaaaaactaactttcccatggtggaaaaaa |
6934523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 387
Target Start/End: Original strand, 25655620 - 25655660
Alignment:
| Q |
347 |
atctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
25655620 |
atctaatggtcaaaaactaactttcccatggtgggaaaaaa |
25655660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0508 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0508
Description:
Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 4200 - 4160
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
4200 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
4160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0508; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 4605 - 4645
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
4605 |
gatctaattgttaaaaactaactttcccatgatggaaaaaa |
4645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 61641 - 61601
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
61641 |
gatctaatggtcaaaaactaactttcccatgatgggaaaaa |
61601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 7635191 - 7635151
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
7635191 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
7635151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 7635616 - 7635656
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
7635616 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
7635656 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 10608253 - 10608341
Alignment:
| Q |
299 |
aaaagatatagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaaaaa |
387 |
Q |
| |
|
||||||| ||||| ||||||| || |||| | |||||||| || | |||||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
10608253 |
aaaagatctagtgctgagagaccataataacattgtgttccctatttaatctaatggtcaaaaactaactttcccatggtgggaaaaaa |
10608341 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 18290282 - 18290242
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
18290282 |
gatctaatggttaaaaattaactttcccatggtgggaaaaa |
18290242 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 18290476 - 18290516
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaa |
386 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
18290476 |
gatctaatggttaaaaactaactttcccatggtgggaaaaa |
18290516 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 28983273 - 28983315
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
28983273 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
28983315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 34717736 - 34717778
Alignment:
| Q |
346 |
gatctaatggttaaaaaataactttcccatgatgggaaaaaag |
388 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| ||||||||||| |
|
|
| T |
34717736 |
gatctaatggtcaaaaactaactttcccatggtgggaaaaaag |
34717778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 18605129 - 18605029
Alignment:
| Q |
285 |
gaagatggtgtgtaaaaagatatagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaaataactttcccatgatgggaaa |
384 |
Q |
| |
|
||||||| |||| ||||| || |||||| ||||||| ||||||||| | |||||| || | || |||||||||||| ||||||||||||| ||| ||| |
|
|
| T |
18605129 |
gaagatgatgtggaaaaa-atttagtgttgagagaccatgataaaattatgttccctacttaattcaatggttaaaaattaactttcccatggtggaaaa |
18605031 |
T |
 |
| Q |
385 |
aa |
386 |
Q |
| |
|
|| |
|
|
| T |
18605030 |
aa |
18605029 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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