View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_low_58 (Length: 338)
Name: NF16077_low_58
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 13 - 322
Target Start/End: Original strand, 41009117 - 41009426
Alignment:
| Q |
13 |
aatatgcttaataaataaagaaaaaactttcataagactaaaggaaatggtacaaaacatagtttaggtgtccagcaagtgtttgaagggagaaataatt |
112 |
Q |
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| T |
41009117 |
aatatgcttaataaataaagaaaaaactttcataagactaaaggaaatggtacaaaacatagtttaggtgtccagcaagtgtttgaagggagaaataatt |
41009216 |
T |
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| Q |
113 |
gctgaatgagttttttattttgttatgttctacttgtgttagaaagagagagatacattaatttggtatatgtcaataaaatcaacctatattggtatct |
212 |
Q |
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| T |
41009217 |
gctgaatgagtttttaattttgttatgttctacttgtgttagaaagagagagataaattaatttggtatatgtcaataaaatcaacctatgttggtatct |
41009316 |
T |
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| Q |
213 |
gagttttgcacttggtaaatgttatcattgtaccaacatcttctgctgctggagacatgtttgatgcatttgtcttctgttcttcacaagagtaaatgct |
312 |
Q |
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| T |
41009317 |
gagttttgcacttggtaaatgttatcattgtaacaacatcttctgctgctggaaacatgtttgatgcatttgtcttctgttcttcacaagagtaaatgct |
41009416 |
T |
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| Q |
313 |
cttttataag |
322 |
Q |
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| T |
41009417 |
cttttataag |
41009426 |
T |
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