View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16077_low_60 (Length: 326)

Name: NF16077_low_60
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16077_low_60
NF16077_low_60
[»] chr6 (47 HSPs)
chr6 (80-305)||(16578876-16579101)
chr6 (80-305)||(16616279-16616504)
chr6 (80-305)||(16554454-16554679)
chr6 (80-305)||(16631010-16631235)
chr6 (80-308)||(25420797-25421024)
chr6 (88-298)||(27647476-27647686)
chr6 (80-298)||(34166666-34166885)
chr6 (88-298)||(13150857-13151068)
chr6 (80-308)||(6026834-6027061)
chr6 (80-308)||(6136320-6136547)
chr6 (79-298)||(33342469-33342689)
chr6 (80-298)||(34164444-34164663)
chr6 (142-305)||(16652759-16652922)
chr6 (80-279)||(411685-411886)
chr6 (92-297)||(5674242-5674447)
chr6 (80-247)||(30125018-30125185)
chr6 (93-299)||(2171882-2172090)
chr6 (79-275)||(3073147-3073344)
chr6 (80-277)||(22709447-22709645)
chr6 (80-305)||(11857343-11857567)
chr6 (80-297)||(14741926-14742142)
chr6 (203-308)||(25421014-25421118)
chr6 (80-297)||(22010189-22010405)
chr6 (80-205)||(6097860-6097986)
chr6 (142-298)||(5266454-5266610)
chr6 (80-264)||(6438899-6439083)
chr6 (79-204)||(26253588-26253714)
chr6 (80-183)||(34151828-34151931)
chr6 (80-137)||(16652716-16652773)
chr6 (87-297)||(16839114-16839323)
chr6 (92-244)||(23896792-23896944)
chr6 (142-297)||(14737128-14737282)
chr6 (80-137)||(5266596-5266653)
chr6 (80-137)||(14737085-14737142)
chr6 (176-297)||(28155167-28155287)
chr6 (87-297)||(33329940-33330149)
chr6 (87-297)||(33335437-33335646)
chr6 (87-297)||(6005790-6005999)
chr6 (209-299)||(6097785-6097877)
chr6 (78-154)||(5343990-5344066)
chr6 (87-135)||(28155097-28155145)
chr6 (185-264)||(5343880-5343959)
chr6 (87-137)||(5016976-5017026)
chr6 (87-137)||(31085953-31086003)
chr6 (88-137)||(5571757-5571806)
chr6 (111-244)||(5756983-5757116)
chr6 (87-132)||(21272469-21272514)
[»] chr5 (49 HSPs)
chr5 (80-308)||(40379678-40379905)
chr5 (80-308)||(16546216-16546443)
chr5 (80-308)||(40381889-40382116)
chr5 (79-305)||(10592843-10593068)
chr5 (80-308)||(16543994-16544221)
chr5 (80-299)||(22536633-22536852)
chr5 (80-308)||(25077706-25077933)
chr5 (80-308)||(25135675-25135902)
chr5 (80-299)||(29719965-29720188)
chr5 (93-297)||(24136266-24136470)
chr5 (80-305)||(27450185-27450409)
chr5 (80-305)||(27445342-27445566)
chr5 (80-283)||(9789605-9789809)
chr5 (80-283)||(18442029-18442233)
chr5 (80-283)||(26177466-26177670)
chr5 (78-264)||(30631764-30631950)
chr5 (80-305)||(43599093-43599318)
chr5 (80-305)||(43604585-43604810)
chr5 (80-305)||(43610077-43610302)
chr5 (80-258)||(29722152-29722332)
chr5 (92-283)||(26170370-26170561)
chr5 (80-295)||(1456638-1456852)
chr5 (79-282)||(16407640-16407844)
chr5 (80-203)||(29752266-29752390)
chr5 (80-301)||(29751523-29751724)
chr5 (80-247)||(29402550-29402717)
chr5 (80-264)||(15045096-15045279)
chr5 (80-282)||(16409077-16409280)
chr5 (79-204)||(15465000-15465126)
chr5 (142-305)||(43592648-43592811)
chr5 (87-297)||(28807083-28807292)
chr5 (92-204)||(36931856-36931968)
chr5 (80-244)||(9352807-9352972)
chr5 (92-263)||(37556137-37556308)
chr5 (92-263)||(37560959-37561130)
chr5 (162-301)||(38219806-38219947)
chr5 (80-137)||(31180773-31180830)
chr5 (87-297)||(33768555-33768764)
chr5 (87-297)||(33791687-33791896)
chr5 (80-137)||(43592797-43592854)
chr5 (87-264)||(2785778-2785955)
chr5 (142-305)||(31180624-31180787)
chr5 (209-297)||(35388079-35388169)
chr5 (87-137)||(14520796-14520846)
chr5 (79-129)||(35388196-35388247)
chr5 (87-154)||(31396497-31396564)
chr5 (80-123)||(43625605-43625648)
chr5 (87-137)||(12083658-12083708)
chr5 (92-137)||(11916457-11916502)
[»] chr7 (43 HSPs)
chr7 (79-308)||(18392553-18392781)
chr7 (80-298)||(32060670-32060888)
chr7 (80-308)||(6592694-6592921)
chr7 (78-299)||(20343498-20343719)
chr7 (80-308)||(6594910-6595137)
chr7 (80-301)||(24789426-24789648)
chr7 (80-308)||(1562360-1562587)
chr7 (80-298)||(21640205-21640423)
chr7 (178-308)||(18389117-18389246)
chr7 (80-297)||(2058388-2058604)
chr7 (80-298)||(20357028-20357246)
chr7 (92-299)||(43504499-43504708)
chr7 (92-277)||(21646445-21646630)
chr7 (80-277)||(39730933-39731131)
chr7 (80-308)||(12406630-12406857)
chr7 (79-277)||(18414077-18414276)
chr7 (123-297)||(1532947-1533121)
chr7 (80-277)||(18409201-18409399)
chr7 (80-297)||(4873505-4873721)
chr7 (80-272)||(48408398-48408591)
chr7 (92-264)||(21811751-21811923)
chr7 (92-297)||(24023831-24024035)
chr7 (92-277)||(25767348-25767527)
chr7 (80-182)||(12397390-12397492)
chr7 (80-297)||(31109070-31109287)
chr7 (92-244)||(2479795-2479947)
chr7 (92-244)||(47264102-47264254)
chr7 (80-136)||(18390506-18390562)
chr7 (92-156)||(44847632-44847696)
chr7 (87-185)||(21983761-21983859)
chr7 (92-140)||(1532897-1532945)
chr7 (87-264)||(24265684-24265861)
chr7 (92-156)||(21989454-21989518)
chr7 (209-308)||(12397278-12397376)
chr7 (87-297)||(16880444-16880653)
chr7 (87-297)||(16885299-16885508)
chr7 (185-264)||(24260926-24261005)
chr7 (87-137)||(79955-80005)
chr7 (77-154)||(24260818-24260895)
chr7 (122-156)||(4509335-4509369)
chr7 (122-156)||(4511177-4511211)
chr7 (122-156)||(6431467-6431501)
chr7 (93-138)||(49092237-49092282)
[»] chr1 (31 HSPs)
chr1 (80-308)||(9036003-9036230)
chr1 (80-308)||(44203218-44203445)
chr1 (80-301)||(20622599-20622821)
chr1 (79-297)||(40281957-40282179)
chr1 (79-297)||(21053539-21053760)
chr1 (79-297)||(9986784-9987005)
chr1 (80-299)||(19360912-19361134)
chr1 (80-242)||(19365768-19365931)
chr1 (80-299)||(51764990-51765212)
chr1 (80-297)||(39445866-39446082)
chr1 (80-297)||(44023377-44023593)
chr1 (80-204)||(24202251-24202376)
chr1 (92-264)||(41391002-41391173)
chr1 (142-297)||(24793709-24793864)
chr1 (87-297)||(25439406-25439615)
chr1 (80-264)||(1054514-1054698)
chr1 (87-297)||(25444599-25444808)
chr1 (80-244)||(13604095-13604260)
chr1 (160-297)||(24786905-24787042)
chr1 (80-137)||(24793666-24793723)
chr1 (142-264)||(41398657-41398778)
chr1 (78-137)||(41398764-41398823)
chr1 (87-137)||(13598967-13599017)
chr1 (92-137)||(21536125-21536170)
chr1 (228-297)||(24202379-24202450)
chr1 (93-137)||(37070334-37070378)
chr1 (87-156)||(26644381-26644450)
chr1 (185-264)||(43988054-43988133)
chr1 (92-137)||(3282273-3282318)
chr1 (80-137)||(13659840-13659897)
chr1 (96-137)||(16124197-16124238)
[»] chr3 (69 HSPs)
chr3 (80-301)||(6716085-6716306)
chr3 (80-308)||(3617034-3617261)
chr3 (80-308)||(54634710-54634937)
chr3 (78-298)||(10055803-10056024)
chr3 (80-308)||(25637013-25637240)
chr3 (80-298)||(10066915-10067134)
chr3 (80-298)||(10058027-10058246)
chr3 (80-298)||(10060249-10060468)
chr3 (80-298)||(10062471-10062690)
chr3 (80-298)||(10064693-10064912)
chr3 (80-308)||(4598879-4599107)
chr3 (80-308)||(4601100-4601328)
chr3 (142-308)||(45282628-45282793)
chr3 (80-298)||(10208778-10208997)
chr3 (80-308)||(10210978-10211206)
chr3 (79-297)||(8477785-8478003)
chr3 (80-297)||(40372256-40372473)
chr3 (142-300)||(6718331-6718489)
chr3 (80-300)||(7167662-7167882)
chr3 (78-283)||(800683-800889)
chr3 (80-305)||(22172662-22172886)
chr3 (80-305)||(28501152-28501377)
chr3 (80-301)||(23198306-23198530)
chr3 (96-301)||(27352097-27352302)
chr3 (80-277)||(1306406-1306604)
chr3 (80-305)||(28503319-28503544)
chr3 (80-272)||(23200536-23200729)
chr3 (80-297)||(18656812-18657029)
chr3 (126-299)||(2671111-2671284)
chr3 (80-205)||(7782586-7782712)
chr3 (80-244)||(26928080-26928245)
chr3 (80-244)||(33386137-33386302)
chr3 (142-293)||(8738585-8738736)
chr3 (142-293)||(9090823-9090974)
chr3 (80-244)||(37726134-37726299)
chr3 (80-244)||(37408036-37408200)
chr3 (80-137)||(6718288-6718345)
chr3 (80-244)||(27453416-27453581)
chr3 (80-137)||(45282585-45282642)
chr3 (92-297)||(2672431-2672635)
chr3 (142-301)||(32143723-32143884)
chr3 (92-297)||(2676587-2676791)
chr3 (79-139)||(32143868-32143929)
chr3 (89-137)||(40734084-40734132)
chr3 (80-131)||(8738542-8738593)
chr3 (80-131)||(9090780-9090831)
chr3 (92-139)||(27974446-27974493)
chr3 (87-138)||(36029658-36029709)
chr3 (87-264)||(8512643-8512820)
chr3 (87-137)||(16264896-16264946)
chr3 (87-137)||(21711768-21711818)
chr3 (142-244)||(27986001-27986103)
chr3 (87-137)||(30709266-30709316)
chr3 (92-137)||(27027273-27027318)
chr3 (209-277)||(7782535-7782603)
chr3 (85-264)||(32475887-32476066)
chr3 (85-264)||(32480745-32480924)
chr3 (87-264)||(8517523-8517700)
chr3 (77-264)||(24968520-24968707)
chr3 (93-139)||(27985971-27986017)
chr3 (87-137)||(39032025-39032075)
chr3 (89-137)||(40735015-40735063)
chr3 (87-130)||(1730916-1730959)
chr3 (80-138)||(40845220-40845279)
chr3 (87-137)||(27038608-27038658)
chr3 (87-137)||(35926057-35926106)
chr3 (87-137)||(40592252-40592302)
chr3 (87-137)||(48438782-48438832)
chr3 (80-137)||(16498637-16498694)
[»] chr8 (30 HSPs)
chr8 (80-308)||(3439088-3439314)
chr8 (80-298)||(15290143-15290362)
chr8 (80-298)||(15470512-15470731)
chr8 (80-298)||(42575690-42575909)
chr8 (80-297)||(4759534-4759751)
chr8 (80-298)||(33037287-33037505)
chr8 (78-297)||(36979797-36980016)
chr8 (79-301)||(18852626-18852848)
chr8 (80-297)||(30656065-30656282)
chr8 (80-300)||(18870021-18870241)
chr8 (93-276)||(1261428-1261611)
chr8 (79-264)||(10683738-10683923)
chr8 (80-283)||(2627318-2627522)
chr8 (78-305)||(7289425-7289653)
chr8 (78-298)||(6311718-6311937)
chr8 (142-298)||(25689604-25689759)
chr8 (80-277)||(26288319-26288517)
chr8 (80-277)||(26301576-26301774)
chr8 (80-277)||(26313570-26313768)
chr8 (79-297)||(39784324-39784541)
chr8 (79-203)||(31042907-31043032)
chr8 (80-260)||(25327664-25327844)
chr8 (92-244)||(7412787-7412939)
chr8 (142-298)||(10688661-10688816)
chr8 (80-137)||(25689561-25689618)
chr8 (80-137)||(10688618-10688675)
chr8 (87-297)||(35745762-35745971)
chr8 (87-137)||(5701959-5702009)
chr8 (92-137)||(4456575-4456620)
chr8 (93-137)||(23799105-23799149)
[»] scaffold0137 (1 HSPs)
scaffold0137 (80-308)||(5859-6087)
[»] chr4 (40 HSPs)
chr4 (78-305)||(8392980-8393207)
chr4 (80-305)||(8395191-8395416)
chr4 (79-308)||(7122266-7122494)
chr4 (80-298)||(5135649-5135868)
chr4 (80-298)||(5137875-5138094)
chr4 (78-297)||(24742360-24742579)
chr4 (80-272)||(7124489-7124681)
chr4 (79-283)||(31495698-31495903)
chr4 (80-305)||(51520826-51521050)
chr4 (80-305)||(56141511-56141737)
chr4 (80-277)||(13992681-13992879)
chr4 (80-301)||(28467977-28468201)
chr4 (79-297)||(9223898-9224115)
chr4 (80-297)||(9228686-9228902)
chr4 (80-297)||(5733030-5733247)
chr4 (142-299)||(29761039-29761196)
chr4 (80-264)||(18856125-18856309)
chr4 (80-264)||(3814422-3814605)
chr4 (87-264)||(45347324-45347501)
chr4 (80-204)||(31985127-31985252)
chr4 (120-260)||(18712295-18712435)
chr4 (80-155)||(18860446-18860521)
chr4 (87-185)||(5148196-5148294)
chr4 (87-140)||(8689044-8689097)
chr4 (92-137)||(29761182-29761227)
chr4 (87-139)||(5143807-5143859)
chr4 (87-137)||(16628353-16628403)
chr4 (87-137)||(38151918-38151968)
chr4 (87-136)||(3778116-3778165)
chr4 (87-138)||(5268699-5268750)
chr4 (87-137)||(6742896-6742946)
chr4 (87-137)||(10047932-10047982)
chr4 (87-137)||(16622774-16622824)
chr4 (143-264)||(45356861-45356982)
chr4 (87-137)||(54867745-54867795)
chr4 (92-137)||(36314716-36314761)
chr4 (92-137)||(36328925-36328970)
chr4 (191-223)||(48142825-48142857)
chr4 (191-223)||(52083009-52083041)
chr4 (191-223)||(52094016-52094048)
[»] scaffold0565 (1 HSPs)
scaffold0565 (80-308)||(2958-3185)
[»] chr2 (25 HSPs)
chr2 (80-308)||(12647740-12647967)
chr2 (80-297)||(9295862-9296079)
chr2 (79-297)||(14291908-14292126)
chr2 (80-297)||(11098387-11098604)
chr2 (92-277)||(25410068-25410253)
chr2 (79-283)||(6266273-6266478)
chr2 (80-282)||(32289148-32289351)
chr2 (80-277)||(3492179-3492377)
chr2 (80-277)||(4484725-4484923)
chr2 (80-277)||(30832921-30833119)
chr2 (80-297)||(39811477-39811693)
chr2 (80-301)||(40739233-40739457)
chr2 (80-157)||(44310471-44310548)
chr2 (80-156)||(32247276-32247352)
chr2 (87-137)||(8389631-8389681)
chr2 (87-139)||(36757425-36757477)
chr2 (92-139)||(28258682-28258729)
chr2 (87-137)||(10706733-10706783)
chr2 (87-137)||(21630511-21630561)
chr2 (87-137)||(33528105-33528155)
chr2 (87-137)||(39483443-39483493)
chr2 (87-131)||(20522794-20522838)
chr2 (87-137)||(23077952-23078002)
chr2 (142-244)||(28258713-28258815)
chr2 (191-223)||(2334769-2334801)
[»] scaffold0674 (1 HSPs)
scaffold0674 (80-308)||(4083-4310)
[»] scaffold0491 (2 HSPs)
scaffold0491 (80-299)||(9087-9308)
scaffold0491 (80-297)||(11534-11753)
[»] scaffold0188 (1 HSPs)
scaffold0188 (80-299)||(17431-17653)
[»] scaffold0286 (1 HSPs)
scaffold0286 (93-299)||(21953-22161)
[»] scaffold0355 (1 HSPs)
scaffold0355 (80-308)||(3337-3564)
[»] scaffold0464 (1 HSPs)
scaffold0464 (80-264)||(761-945)
[»] scaffold0135 (1 HSPs)
scaffold0135 (79-297)||(34553-34770)
[»] scaffold1519 (1 HSPs)
scaffold1519 (120-277)||(523-680)
[»] scaffold0140 (1 HSPs)
scaffold0140 (80-204)||(7911-8036)
[»] scaffold0006 (4 HSPs)
scaffold0006 (80-244)||(132752-132917)
scaffold0006 (87-137)||(6252-6302)
scaffold0006 (87-137)||(3060-3110)
scaffold0006 (80-137)||(149601-149658)
[»] scaffold1455 (1 HSPs)
scaffold1455 (80-155)||(1709-1784)
[»] scaffold0510 (1 HSPs)
scaffold0510 (92-244)||(1096-1248)
[»] scaffold0665 (2 HSPs)
scaffold0665 (142-260)||(8112-8230)
scaffold0665 (80-137)||(8216-8273)
[»] scaffold0087 (2 HSPs)
scaffold0087 (92-244)||(43447-43599)
scaffold0087 (87-139)||(36332-36384)
[»] scaffold0259 (1 HSPs)
scaffold0259 (87-297)||(1746-1955)
[»] scaffold0028 (1 HSPs)
scaffold0028 (87-297)||(148451-148660)
[»] scaffold0197 (2 HSPs)
scaffold0197 (87-264)||(13791-13968)
scaffold0197 (87-297)||(18671-18880)
[»] scaffold0009 (1 HSPs)
scaffold0009 (87-264)||(176457-176634)
[»] scaffold0098 (1 HSPs)
scaffold0098 (80-139)||(45744-45804)


Alignment Details
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 16579101 - 16578876
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579101 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 16579002  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16579001 agggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16578902  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    ||||||||||||||||||||||||||    
T  16578901 cgcagatcgtgacacgatttgggaaa 16578876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 16616279 - 16616504
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616279 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 16616378  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16616379 agggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16616478  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    ||||||||||||||||||||||||||    
T  16616479 cgcagatcgtgacacgatttgggaaa 16616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 16554454 - 16554679
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  16554454 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16554553  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16554554 agggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16554653  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    ||||||||||||||||||||||||||    
T  16554654 cgcagatcgtgacacgatttgggaaa 16554679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 16631010 - 16631235
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  16631010 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16631109  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16631110 agggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16631209  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    ||||||||||||||||||||||||||    
T  16631210 cgcagatcgtgacacgatttgggaaa 16631235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 25420797 - 25421024
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||  |||||||||||||| |||    
T  25420797 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcgga-tgccgtgagctagggttg 25420895  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25420896 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25420994  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| ||||||||| || |||||||||||    
T  25420995 gacgcaaatcgtgacatga-ttgggaaaatc 25421024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 88 - 298
Target Start/End: Original strand, 27647476 - 27647686
Alignment:
Q  88 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgca 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgca 27647575  T
Q  188 aattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatc 287  Q
    || ||||| |||||||  |  |||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||||  | |||||||||    
T  27647576 aaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtcgtttcttgggtggtacgcagatc 27647675  T
Q  288 gtgacacgatt 298  Q
    |||||||||||    
T  27647676 gtgacacgatt 27647686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 34166666 - 34166885
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  34166666 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 34166764  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34166765 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 34166863  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    | ||||| ||||||||||||||    
T  34166864 gtacgcaaatcgtgacacgatt 34166885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 88 - 298
Target Start/End: Original strand, 13150857 - 13151068
Alignment:
Q  88 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttgcaggg-tg 185  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||||||| ||    
T  13150857 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttgcaggggtg 13150955  T
Q  186 caaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  13150956 caaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 13151054  T
Q  285 atcgtgacacgatt 298  Q
    ||||||||||||||    
T  13151055 atcgtgacacgatt 13151068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 6026834 - 6027061
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  || || |||||||||||||| ||||| | |||||||| |||    
T  6026834 tgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtgc-gagagctagggttg 6026932  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  6026933 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacg 6027031  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  6027032 gacgcaaatcgtgacacga-ttgggaaaatc 6027061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 6136547 - 6136320
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||| |||    
T  6136547 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcgga-tgccgtgagctagggttg 6136449  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||   ||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6136448 caggggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 6136349  T
Q  279 acgcagatcgtgacacgatttgggaaaatc 308  Q
    | ||| |||||||||| | |||||||||||    
T  6136348 aagcaaatcgtgacac-aattgggaaaatc 6136320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 79 - 298
Target Start/End: Complemental strand, 33342689 - 33342469
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 177  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||| |||||||||  |||||||||||||| ||    
T  33342689 ctgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcgga-tgccgtgagctagggtt 33342591  T
Q  178 gcaggg-tgcaaattcgtgacacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 275  Q
    |||||| ||||||| |||| ||||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33342590 gcaggggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 33342492  T
Q  276 cggacgcagatcgtgacacgatt 298  Q
    |||||||| ||||||||||||||    
T  33342491 cggacgcaaatcgtgacacgatt 33342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 34164444 - 34164663
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| |||||||||  ||||||||| |||| |||    
T  34164444 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcgga-tgccgtgagttagggttg 34164542  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34164543 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 34164641  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  34164642 ggacgcaaatcgtgacacgatt 34164663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 142 - 305
Target Start/End: Original strand, 16652759 - 16652922
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtta 16652858  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaa 305  Q
    ||||||||| |||||||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  16652859 agtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgatttgggaaa 16652922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 80 - 279
Target Start/End: Original strand, 411685 - 411886
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||| |||||| |||||||||||||||  ||    
T  411685 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtctg 411784  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | ||||||||||    
T  411785 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacg 411884  T
Q  278 ga 279  Q
    ||    
T  411885 ga 411886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 92 - 297
Target Start/End: Original strand, 5674242 - 5674447
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||| ||||| | | ||||||||||| | ||||||||||| || |    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaat 5674341  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtga 291  Q
    |||||||| || | || |||||||||||||||  ||||||||||||||||||||||| | ||||||||||||| | |||||||||| ||||| |||||||    
T  5674342 cgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtga 5674441  T
Q  292 cacgat 297  Q
    ||||||    
T  5674442 cacgat 5674447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 30125018 - 30125185
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  30125018 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 30125117  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatc 247  Q
    |||  || || ||||| |||||||| || |||||||||||||||   |||||||||||||||||||||    
T  30125118 aggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 93 - 299
Target Start/End: Complemental strand, 2172090 - 2171882
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 192  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || ||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatc 2171991  T
Q  193 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtg 290  Q
    |||||||||| | || ||||||||||||||| || ||||||||||||||||| |||   |||||||| |||||| ||||| |||| |||  |  ||||||    
T  2171990 gtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttgtgacgtacgtaccaatcgtg 2171891  T
Q  291 acacgattt 299  Q
    |||||||||    
T  2171890 acacgattt 2171882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 79 - 275
Target Start/End: Complemental strand, 3073344 - 3073147
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | ||||||||||| |  |    
T  3073344 ctgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtct 3073245  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 275  Q
     |||||||| || |||||||||||||   | |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||| | ||||||||    
T  3073244 acagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 3073147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 22709645 - 22709447
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||| ||||| | ||||||||||||| | | |||| |||||| | |||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggtttg 22709546  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  22709545 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 22709447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 11857567 - 11857343
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| ||||    
T  11857567 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 11857468  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||||||| |  | ||||||||| |||   ||||||| | |     
T  11857467 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtc-aaccttgggtccgt 11857369  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
     ||| |||||||||||||||||||||    
T  11857368 tgcaaatcgtgacacgatttgggaaa 11857343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 14741926 - 14742142
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  | |||||||||| ||||    
T  14741926 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgc 14742025  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||  | ||||||||| |||   ||||||| | |     
T  14742026 aggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-aaccttgggtccgt 14742124  T
Q  280 cgcagatcgtgacacgat 297  Q
     |||||||||||||||||    
T  14742125 tgcagatcgtgacacgat 14742142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 25421014 - 25421118
Alignment:
Q  203 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttggg 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  25421014 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatga-ttggg 25421112  T
Q  303 aaaatc 308  Q
    ||||||    
T  25421113 aaaatc 25421118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 22010189 - 22010405
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  ||||| || ||| ||||    
T  22010189 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgc 22010288  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  22010289 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 22010387  T
Q  280 cgcagatcgtgacacgat 297  Q
     ||| |||||||||||||    
T  22010388 tgcaaatcgtgacacgat 22010405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 6097986 - 6097860
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 6097887  T
Q  179 cagggtgcaaattcgtgacacgatttg 205  Q
    |||||||| || |||||||||||||||    
T  6097886 cagggtgctaaatcgtgacacgatttg 6097860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 298
Target Start/End: Complemental strand, 5266610 - 5266454
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||| |||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 5266511  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatt 298  Q
    ||||||||| ||||||||||||| | |||||  ||||||||| ||||||||||||||    
T  5266510 agtatccttgataaggactggtcataccttgaaacggacgcaaatcgtgacacgatt 5266454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 264
Target Start/End: Complemental strand, 6439083 - 6438899
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 178  Q
    |||||| |||| |||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  6439083 tgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 6438985  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    | || |||| | ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  6438984 ctggatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 6438899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 26253588 - 26253714
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||| ||||| | | | ||||||| ||| |     
T  26253588 ctgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagtta 26253687  T
Q  178 gcagggtgcaaattcgtgacacgattt 204  Q
    ||||||||| || ||||||||||||||    
T  26253688 gcagggtgccaaatcgtgacacgattt 26253714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 183
Target Start/End: Original strand, 34151828 - 34151931
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 178  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||||| || |||||    
T  34151828 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc-ggatgccgtgagttagggttg 34151926  T
Q  179 caggg 183  Q
    |||||    
T  34151927 caggg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 16652716 - 16652773
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16652716 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 16839323 - 16839114
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  16839323 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 16839226  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||||||||| |  ||||    
T  16839225 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttgggaccgttgcag 16839127  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  16839126 atcgtgacacgat 16839114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 23896944 - 23896792
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| || ||||||||  |||||||||||||||||||| ||||||||||||||| |   |  |||||| | | ||||||||||  || |    
T  23896944 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaat 23896845  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    ||||  ||||||| |  |||||||||||||||  | ||||||||| |||||||    
T  23896844 cgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 297
Target Start/End: Original strand, 14737128 - 14737282
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||  |  |||||||||||| |||||||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 14737227  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat 297  Q
    ||||||  | ||||||||| |||   ||||||| | |  |||||||||||||||||    
T  14737228 agtatcactgataaggacttgtc-aaccttgggtccgttgcagatcgtgacacgat 14737282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 5266653 - 5266596
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5266653 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 14737085 - 14737142
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14737085 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 297
Target Start/End: Original strand, 28155167 - 28155287
Alignment:
Q  176 ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 275  Q
    |||||||||||||| ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | |||||||||||||   ||| ||||    
T  28155167 ttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc-aacctgggga 28155265  T
Q  276 cggacgcagatcgtgacacgat 297  Q
    | |  |||||||||||||||||    
T  28155266 ccgttgcagatcgtgacacgat 28155287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 33329940 - 33330149
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  ||||||||||||  |||| | ||||||||| | || |||| ||      
T  33329940 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacga--tcggagatgccgtgagccaagtttgctggaa 33330037  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33330038 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33330136  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  33330137 atcgtgacacgat 33330149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 33335437 - 33335646
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||  | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33335437 attggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33335534  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33335535 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33335633  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  33335634 atcgtgacacgat 33335646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 6005999 - 6005790
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||| ||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||| ||||| | ||| || ||      
T  6005999 attggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccatgagccaagtttgctggaa 6005902  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  6005901 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 6005803  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  6005802 atcgtgacacgat 6005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 6097877 - 6097785
Alignment:
Q  209 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgca--gatcgtgacacgattt 299  Q
    |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||| |||||| |||||   |||||||||||||||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattt 6097785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 5344066 - 5343990
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 154  Q
    |||||||  |||| ||||||||||||||| ||| ||||||| ||||||||| |||||||| |  |||||||||||||    
T  5344066 actgttggaattggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 28155097 - 28155145
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 135  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155097 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 5343959 - 5343880
Alignment:
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  5343959 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 5343880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 5016976 - 5017026
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  5016976 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 31085953 - 31086003
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  31085953 attggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 5571757 - 5571806
Alignment:
Q  88 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||||| | ||| |||| || ||||||||||||||||||    
T  5571757 ttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 5756983 - 5757116
Alignment:
Q  111 aagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaa 210  Q
    ||||| || ||||| ||||||||||| ||| |||||||||| |||| |   || |||||| | | ||||||||||  || |||||  ||||||| |  ||    
T  5756983 aagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaa 5757082  T
Q  211 atcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||||||||||||  | ||||||||| |||||||    
T  5757083 atcgtgacacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 132  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 40379678 - 40379905
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  40379678 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 40379776  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40379777 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 40379876  T
Q  279 acgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||| |||||||||||| |||||||||||    
T  40379877 acgcaaatcgtgacacga-ttgggaaaatc 40379905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 16546216 - 16546443
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  16546216 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 16546314  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16546315 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16546414  T
Q  279 acgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||| |||||||||||| |||||||||||    
T  16546415 acgcaaatcgtgacacga-ttgggaaaatc 16546443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 40381889 - 40382116
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  40381889 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 40381987  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40381988 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 40382087  T
Q  279 acgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||| |||||||||||| |||||||||||    
T  40382088 acgcaaatcgtgacacga-ttgggaaaatc 40382116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 79 - 305
Target Start/End: Original strand, 10592843 - 10593068
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  10592843 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccggg-tgccgtgagataggttg 10592941  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||  |     
T  10592942 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtggt 10593041  T
Q  279 acgcagatcgtgacacgatttgggaaa 305  Q
    |||||||||||||||||||||||||||    
T  10593042 acgcagatcgtgacacgatttgggaaa 10593068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 16543994 - 16544221
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | ||||| |||||||||| ||     
T  16543994 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgctgtgagctagggtta 16544092  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16544093 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16544192  T
Q  279 acgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||| |||||||||||| |||||||||||    
T  16544193 acgcaaatcgtgacacga-ttgggaaaatc 16544221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 22536852 - 22536633
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22536852 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 22536753  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| ||||| ||| |||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  22536752 agggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 22536653  T
Q  280 cgcagatcgtgacacgattt 299  Q
    | ||||||||||||||||||    
T  22536652 cacagatcgtgacacgattt 22536633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 25077706 - 25077933
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||||||||||||||| |||    
T  25077706 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattg-gaggtgccgtgagctagggttg 25077804  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
     |||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25077805 taggggtgcaaat-cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25077903  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  25077904 gacgcaaatcgtgacacga-ttgggaaaatc 25077933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 25135675 - 25135902
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||||||||||||||| |||    
T  25135675 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattg-gaggtgccgtgagctagggttg 25135773  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
     |||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25135774 taggggtgcaaat-cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25135872  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  25135873 gacgcaaatcgtgacacga-ttgggaaaatc 25135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 299
Target Start/End: Original strand, 29719965 - 29720188
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||  ||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 29720064  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | ||||||||||    
T  29720065 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacg 29720164  T
Q  278 gacgca--gatcgtgacacgattt 299  Q
    || |||   |||||||||||||||    
T  29720165 gatgcaccaatcgtgacacgattt 29720188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 93 - 297
Target Start/End: Complemental strand, 24136470 - 24136266
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 192  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||| |||||| | ||||||||||||| ||||||||||| || ||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttgcagggtgccaaatc 24136371  T
Q  193 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgac 292  Q
    |||||||||| | || |||||||||||||||  | ||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||| ||||||||    
T  24136370 gtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtgac 24136271  T
Q  293 acgat 297  Q
    |||||    
T  24136270 acgat 24136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 27450409 - 27450185
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  27450409 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27450310  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | ||    
T  27450309 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 27450211  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    |||| |||||||||||||||||||||    
T  27450210 cgcaaatcgtgacacgatttgggaaa 27450185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 27445566 - 27445342
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  27445566 tgttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27445467  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | ||    
T  27445466 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 27445368  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    |||| |||||||||||||||||||||    
T  27445367 cgcaaatcgtgacacgatttgggaaa 27445342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 80 - 283
Target Start/End: Complemental strand, 9789809 - 9789605
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | |||||||||||||||| |||| ||||     
T  9789709 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtttcttgcgacga 9789610  T
Q  279 acgca 283  Q
    |||||    
T  9789609 acgca 9789605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 80 - 283
Target Start/End: Complemental strand, 18442233 - 18442029
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | ||||||||||| | |||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | |||||||||||||||| |||||||||     
T  18442133 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacga 18442034  T
Q  279 acgca 283  Q
    |||||    
T  18442033 acgca 18442029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 80 - 283
Target Start/End: Original strand, 26177466 - 26177670
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || ||||||||||||   || |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| |||||||||||    
T  26177566 cagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgg 26177665  T
Q  279 acgca 283  Q
    |||||    
T  26177666 acgca 26177670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 78 - 264
Target Start/End: Complemental strand, 30631950 - 30631764
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||    
T  30631950 actgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagttt 30631851  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||||  || || |||||||||||||| || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||    
T  30631850 gcaggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 30631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 43599318 - 43599093
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||  ||| |||||||||||| |||    
T  43599318 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttg 43599219  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | |    
T  43599218 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcag 43599120  T
Q  279 acgcagatcgtgacacgatttgggaaa 305  Q
    ||||| |||||||||||||||||||||    
T  43599119 acgcaaatcgtgacacgatttgggaaa 43599093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 43604810 - 43604585
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||  ||| |||||||||||| |||    
T  43604810 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttg 43604711  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | |    
T  43604710 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcag 43604612  T
Q  279 acgcagatcgtgacacgatttgggaaa 305  Q
    ||||| |||||||||||||||||||||    
T  43604611 acgcaaatcgtgacacgatttgggaaa 43604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 43610302 - 43610077
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||  ||| |||||||||||| |||    
T  43610302 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttg 43610203  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | |    
T  43610202 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcag 43610104  T
Q  279 acgcagatcgtgacacgatttgggaaa 305  Q
    ||||| |||||||||||||||||||||    
T  43610103 acgcaaatcgtgacacgatttgggaaa 43610077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 80 - 258
Target Start/End: Original strand, 29722152 - 29722332
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||  ||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctg 29722251  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataagga 258  Q
    || ||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | |||||||    
T  29722252 catggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 92 - 283
Target Start/End: Original strand, 26170370 - 26170561
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | ||||||||||| || |    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaat 26170469  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgca 283  Q
    |||||||||||   || |||||||||||  ||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||    
T  26170470 cgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgca 26170561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 295
Target Start/End: Original strand, 1456638 - 1456852
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| || |    
T  1456638 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttac 1456737  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||| | ||||||||| ||| | ||||||| | ||    
T  1456738 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttgggtcaga 1456836  T
Q  280 cgcagatcgtgacacg 295  Q
     ||| |||||||||||    
T  1456837 tgcaaatcgtgacacg 1456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 79 - 282
Target Start/End: Original strand, 16407640 - 16407844
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||| | | ||||||||||| | ||    
T  16407640 ctgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggttt 16407739  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||| || |||||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | |||||||| |||||| ||||||||||    
T  16407740 gcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttgggacg 16407839  T
Q  278 gacgc 282  Q
     ||||    
T  16407840 tacgc 16407844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 29752390 - 29752266
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  179 cagggtgcaaattcgtgacacgatt 203  Q
    |||||||| || ||||| |||||||    
T  29752290 cagggtgccaaatcgtggcacgatt 29752266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 301
Target Start/End: Complemental strand, 29751724 - 29751523
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||  |||||||||||| |||||||||||||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||||                     |||||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  29751624 cagggtgccaaatcgtgacacgatt---------------------gtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 29751546  T
Q  279 acgcagatcgtgacacgatttgg 301  Q
    ||||| |||||||||||||||||    
T  29751545 acgcaaatcgtgacacgatttgg 29751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 29402550 - 29402717
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||  |  ||| |||||||| ||||    
T  29402550 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgc 29402649  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatc 247  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||    
T  29402650 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 29402717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 264
Target Start/End: Complemental strand, 15045279 - 15045096
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||||||| || ||||    
T  15045279 tgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgc 15045181  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||| |||||||||  | |||||||||||||    
T  15045180 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtc 15045096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 80 - 282
Target Start/End: Original strand, 16409077 - 16409280
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | || |||||||| | |||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    || ||||| || | |||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| | ||||||||     
T  16409177 caaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattgggacgt 16409276  T
Q  279 acgc 282  Q
    ||||    
T  16409277 acgc 16409280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 15465126 - 15465000
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | ||    
T  15465126 ctgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggttt 15465027  T
Q  178 gcagggtgcaaattcgtgacacgattt 204  Q
    ||||||||| || ||||||||||||||    
T  15465026 gcagggtgccaaatcgtgacacgattt 15465000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 142 - 305
Target Start/End: Complemental strand, 43592811 - 43592648
Alignment:
Q  142 atcgtgacacgatttcg-gggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 240  Q
    ||||||||||||||||  ||| |||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||    
T  43592811 atcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 43592712  T
Q  241 aagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaa 305  Q
    |||||||| | ||||||||||||| | ||||||| | |||||| |||||||||||||||||||||    
T  43592711 aagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgacacgatttgggaaa 43592648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 28807083 - 28807292
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 185  Q
    |||| |||||||||| |||||||||||||||| | ||||||| ||||||||||  ||||||||||||| | | | |||||||||| | ||| ||||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatct-gagatgccgtgagccaagtttgcagggtg 28807181  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 285  Q
    |||| ||||| |||||| | || ||||||||||||||||  |||||||| | ||||||||||  | |||||||||||||   ||| ||||| |  |||||    
T  28807182 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc-aacctggggaccgttgcaga 28807280  T
Q  286 tcgtgacacgat 297  Q
    ||||||||||||    
T  28807281 tcgtgacacgat 28807292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 36931856 - 36931968
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||| | | || |||||||| | ||||||||||| || |    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttgcagggtgccaaat 36931955  T
Q  192 cgtgacacgattt 204  Q
    |||||||||||||    
T  36931956 cgtgacacgattt 36931968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 9352807 - 9352972
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||| |   ||||||||||| | |||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtttg 9352906  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||||||  || ||||| |||||||  |  |||||||||||||||  | ||||||||| |||||||    
T  9352907 cagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 263
Target Start/End: Original strand, 37556137 - 37556308
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg--ttgcagggtgcaaa 189  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||| | | | |||||||||| | |  |||  ||  |||||    
T  37556137 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatct-gagatgccgtgagccaagttttgatggaggcaaa 37556235  T
Q  190 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggt 263  Q
     ||||| |||||| | || |||| |||||||||||  |||||||||| ||||||||||  | ||||||||||||    
T  37556236 -tcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 263
Target Start/End: Original strand, 37560959 - 37561130
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg--ttgcagggtgcaaa 189  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    ||||||||||||| | | | |||||||||| | |  |||  ||  |||||    
T  37560959 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatct-gagatgccgtgagccaagttttgatggaggcaaa 37561057  T
Q  190 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggt 263  Q
     ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | ||||||||||||    
T  37561058 -tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 301
Target Start/End: Complemental strand, 38219947 - 38219806
Alignment:
Q  162 tgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactg 261  Q
    ||||||||||| | ||| ||||||| || |||||||||||| | || |||| ||||||||||  | ||||||||| ||||||| ||| | ||||||||||    
T  38219947 tgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactg 38219848  T
Q  262 gtcgttccttgggacggacg--cagatcgtgacacgatttgg 301  Q
    ||||| ||||| |||| |||  |  |||||||||||||||||    
T  38219847 gtcgtaccttgtgacgtacgttccaatcgtgacacgatttgg 38219806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 31180830 - 31180773
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31180830 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 33768764 - 33768555
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33768764 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33768667  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33768666 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33768568  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  33768567 atcgtgacacgat 33768555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 33791896 - 33791687
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33791896 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33791799  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33791798 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33791700  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  33791699 atcgtgacacgat 33791687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 43592854 - 43592797
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43592854 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 264
Target Start/End: Complemental strand, 2785955 - 2785778
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  2785955 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 2785858  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  2785857 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 2785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 305
Target Start/End: Complemental strand, 31180787 - 31180624
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||  |||| |||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   || |||| |||||||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgtta 31180688  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat-ttgggaaa 305  Q
    ||||||  | |||||||||||||   ||||||| | |||||| ||||||||| ||| ||||||||    
T  31180687 agtatcactgataaggactggtc-aaccttgggtcagacgcaaatcgtgacatgatcttgggaaa 31180624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 35388169 - 35388079
Alignment:
Q  209 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtgacacgat 297  Q
    |||| ||||||||||  | ||||||||||||||||||||||| ||||||||||||| | |||||||||| |||  || |||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgat 35388079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 14520846 - 14520796
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14520846 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 35388247 - 35388196
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 129  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  35388247 ctgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 31396497 - 31396564
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 154  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  31396497 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 31396564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 43625648 - 43625605
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaa 123  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||    
T  43625648 tgttgatattggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 12083658 - 12083708
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||| |||||| |||| ||||||||||| ||||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 11916457 - 11916502
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  11916457 cttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 79 - 308
Target Start/End: Complemental strand, 18392781 - 18392553
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 177  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| ||    
T  18392781 ctgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggtt 18392683  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18392682 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18392583  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  18392582 gacgcaaatcgtgacacga-ttgggaaaatc 18392553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 80 - 298
Target Start/End: Complemental strand, 32060888 - 32060670
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  32060888 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgga-tgccgtgagctagggttg 32060790  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32060789 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 32060691  T
Q  278 gacgcagatcgtgacacgatt 298  Q
    |||||| ||||||||||||||    
T  32060690 gacgcaaatcgtgacacgatt 32060670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 6592921 - 6592694
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  6592921 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcgga-tgccgtgagctagggttg 6592823  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6592822 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6592724  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  6592723 gacgcaaatcgtgacacga-ttgggaaaatc 6592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 78 - 299
Target Start/End: Original strand, 20343498 - 20343719
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  20343498 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggtt 20343597  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    || || |||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |    
T  20343598 gccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 20343697  T
Q  278 gacgcagatcgtgacacgattt 299  Q
     |||||||||||||||||||||    
T  20343698 tacgcagatcgtgacacgattt 20343719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 6595137 - 6594910
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  6595137 tgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcgga-tgccgtgagctagggttg 6595039  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6595038 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6594940  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  6594939 gacgcaaatcgtgacacga-ttgggaaaatc 6594910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 80 - 301
Target Start/End: Original strand, 24789426 - 24789648
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| |||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtttg 24789525  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || ||||| |||||| | || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  24789526 cagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 24789625  T
Q  279 acgcagatcgtgacacgatttgg 301  Q
    ||||| ||| |||||||||||||    
T  24789626 acgcaaatcttgacacgatttgg 24789648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 1562587 - 1562360
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |  |    | | ||      
T  1562587 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtgtttctttttttttgttttt 1562488  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
     ||||   || ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  1562487 tgggttttaaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacgga 1562388  T
Q  280 cgcagatcgtgacacgatttgggaaaatc 308  Q
    |||| |||||||||||| |||||||||||    
T  1562387 cgcaaatcgtgacacga-ttgggaaaatc 1562360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 80 - 298
Target Start/End: Complemental strand, 21640423 - 21640205
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  21640423 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 21640324  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||||||| |||||||||  | ||||||||||||| | |||||| |||||    
T  21640323 aggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacgga 21640224  T
Q  280 cgcagatcgtgacacgatt 298  Q
    |||| ||||||||||||||    
T  21640223 cgcaaatcgtgacacgatt 21640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 18389246 - 18389117
Alignment:
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18389147  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  18389146 gacgcaaatcgtgacacga-ttgggaaaatc 18389117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 2058604 - 2058388
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||||    
T  2058604 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagctagtttgc 2058506  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | |||||||  | |    
T  2058505 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgta 2058406  T
Q  280 cgcagatcgtgacacgat 297  Q
    |||| |||||||||||||    
T  2058405 cgcaaatcgtgacacgat 2058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 20357028 - 20357246
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  20357028 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 20357127  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || ||||||||||| |||   |||||||||||||||||||||||| |||||||| ||||   ||||||| | ||    
T  20357128 aggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtcaga 20357227  T
Q  280 cgcagatcgtgacacgatt 298  Q
    |||| |||||| |||||||    
T  20357228 cgcaaatcgtggcacgatt 20357246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 92 - 299
Target Start/End: Complemental strand, 43504708 - 43504499
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || |    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 43504609  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgca--gatcgt 289  Q
    |||||||||||   || |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||| || |||   |||||    
T  43504608 cgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacagatgcaccaatcgt 43504509  T
Q  290 gacacgattt 299  Q
    ||||||||||    
T  43504508 gacacgattt 43504499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 92 - 277
Target Start/End: Complemental strand, 21646630 - 21646445
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || |    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 21646531  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||||| | ||||||||||||||||||  | ||||||||||||||||||||||| ||||| ||||||| | ||||||||||    
T  21646530 cgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacg 21646445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 277
Target Start/End: Original strand, 39730933 - 39731131
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 39731032  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||    
T  39731033 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacg 39731131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 12406857 - 12406630
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| ||||    
T  12406857 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 12406758  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    | |  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  12406757 aagacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 12406659  T
Q  280 cgcagatcgtgacacgatttgggaaaatc 308  Q
     ||| |||||||||||||||||| |||||    
T  12406658 tgcaaatcgtgacacgatttggggaaatc 12406630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 18414276 - 18414077
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| | |||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||| |||||||| | ||||||||||||| | ||    
T  18414276 ctgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggttt 18414177  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||| || || |||||||||||| | || ||||||| |||||||  | ||||||||| ||||||| ||| | ||||||||||||||| ||||| ||||    
T  18414176 gcagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacg 18414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 1532947 - 1533121
Alignment:
Q  123 atcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacga 222  Q
    |||||||||||| ||||| ||||||||| ||||| | |||||| |||||||| ||||||||||| || |||||||||||| | || ||||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacga 1533046  T
Q  223 tcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat 297  Q
    | ||||||||| |||||||||||||||| ||||||||||||  | |||||||||  || || |||||||||||||    
T  1533047 ttgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgat 1533121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 18409399 - 18409201
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||||| | ||||||||||||| | |||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || || ||||||||| | |  |||||||||||||||  | ||||||||| ||||||| ||| | ||||||||||||||| ||||| ||||    
T  18409299 cagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacg 18409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 4873721 - 4873505
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  ||||| || ||| ||||    
T  4873721 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagatagtttgc 4873622  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||| ||   |||||||||||||||||||||  | ||||||||| ||| ||||||||| | |     
T  4873621 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtc-ttccttgggtccgt 4873523  T
Q  280 cgcagatcgtgacacgat 297  Q
     ||| |||||||||||||    
T  4873522 tgcaaatcgtgacacgat 4873505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 272
Target Start/End: Original strand, 48408398 - 48408591
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 48408497  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttg 272  Q
    |||||||| || |||||||||||| | |  |||||||||||||||    ||||||||||||||||| ||    ||||||||||||||| |||||    
T  48408498 cagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttg 48408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 92 - 264
Target Start/End: Original strand, 21811751 - 21811923
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaat 190  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||||||| | | | |||||||||| | ||| ||||||||||||     
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatct-gagatgccgtgagcaatgtttgcagggtgcaaaa 21811849  T
Q  191 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | |||||||||||||    
T  21811850 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtc 21811923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 92 - 297
Target Start/End: Original strand, 24023831 - 24024035
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||  |  || | ||||||| |||||||  || || |    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaat 24023930  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtga 291  Q
    |||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||   ||| ||||| |  |||||||||||    
T  24023931 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtga 24024029  T
Q  292 cacgat 297  Q
    ||||||    
T  24024030 cacgat 24024035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 92 - 277
Target Start/End: Complemental strand, 25767527 - 25767348
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    |||||||||||||||||||||       ||||||||||||| | ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || |    
T  25767527 cttcaaatttgtggtctggaaa------gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 25767434  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||||||| || |||||||||||||||  | ||||||||||||||||| ||    |||||||| |||||| ||||| ||||    
T  25767433 cgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtgacg 25767348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 12397492 - 12397390
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||  |  |||||||||||| ||||    
T  12397492 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgc 12397393  T
Q  180 agg 182  Q
    |||    
T  12397392 agg 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 31109070 - 31109287
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagct-aggtt 177  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||   ||||| || |||| || ||    
T  31109070 tgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc-aagtgcctgtaagctaagttt 31109168  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||  || || ||||| |||||| | || |||||||||||||||   |||||||||| |||||||||   | ||||||||| ||| | ||||||| |     
T  31109169 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtc-tgccttggggcc 31109267  T
Q  278 gacgcagatcgtgacacgat 297  Q
    |  |||||||||||||||||    
T  31109268 gttgcagatcgtgacacgat 31109287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 2479947 - 2479795
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| || |||||||| ||||| ||||||||||||||| |||||||||||||||     ||||||||||| | ||||||||||  || |    
T  2479947 cttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttgcagggtgtcaaat 2479848  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||| |||||||| |  ||||||| |||||||  | ||||||| | |||||||    
T  2479847 cgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagt 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 47264254 - 47264102
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||| |   || |||||||| | ||| ||||||  || |    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttgtagggtgtcaaat 47264155  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||| ||| |||  |  |||||||||||||||  | ||||||||| |||||||    
T  47264154 cgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagt 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 18390562 - 18390506
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 136  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18390562 tgttgagattgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44847632 - 44847696
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 156  Q
    ||||||||||||||| |  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  44847632 cttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 21983859 - 21983761
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtg 185  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    ||||||||||||||| |   || |||||||| | ||||||||||    
T  21983859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttgcagggtg 21983761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 1532897 - 1532945
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgg 1532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 24265684 - 24265861
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 185  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  24265684 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 24265782  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  24265783 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 24265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 21989518 - 21989454
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 156  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||    |||||||||||||||    
T  21989518 cttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 12397376 - 12397278
Alignment:
Q  209 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |  ||| |||||||||||||||||| |||||    
T  12397376 aaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtgacacgatttggggaaatc 12397278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 16880653 - 16880444
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 185  Q
    |||| ||||||||| ||||| ||||||| ||| | ||||||| ||||||||||  |||||||||||| |  |||  || ||||| |||| |||| ||  |    
T  16880653 attgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacga-tcagggaggcagtgagcctagtttgctggaag 16880555  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 285  Q
    |||| ||||| |||||| | || |||| ||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||| ||||| |  |||||    
T  16880554 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctggggaccgttgcaga 16880456  T
Q  286 tcgtgacacgat 297  Q
    ||||||||||||    
T  16880455 tcgtgacacgat 16880444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 16885508 - 16885299
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 185  Q
    |||| ||||||||| ||||| ||||||| ||| | ||||||| ||||||||||  |||||||||||| |  |||  || ||||| |||| |||| ||  |    
T  16885508 attgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacga-tcagggaggcagtgagcctagtttgctggaag 16885410  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 285  Q
    |||| ||||| |||||| | || |||| ||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||| ||||| |  |||||    
T  16885409 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctggggaccgttgcaga 16885311  T
Q  286 tcgtgacacgat 297  Q
    ||||||||||||    
T  16885310 tcgtgacacgat 16885299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 24260926 - 24261005
Alignment:
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  24260926 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 24261005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 80005 - 79955
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||| | ||||||||||| ||||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 24260818 - 24260895
Alignment:
Q  77 gactgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 154  Q
    ||||||||  |||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  24260818 gactgttggaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 4509369 - 4509335
Alignment:
Q  122 aatcgtgacacgattttggtatcgtgacacgattt 156  Q
    ||||||||||||||||||| |||||||||||||||    
T  4509369 aatcgtgacacgattttgggatcgtgacacgattt 4509335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 4511211 - 4511177
Alignment:
Q  122 aatcgtgacacgattttggtatcgtgacacgattt 156  Q
    ||||||||||||||||||| |||||||||||||||    
T  4511211 aatcgtgacacgattttgggatcgtgacacgattt 4511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 6431467 - 6431501
Alignment:
Q  122 aatcgtgacacgattttggtatcgtgacacgattt 156  Q
    ||||||||||||||||||| |||||||||||||||    
T  6431467 aatcgtgacacgattttgggatcgtgacacgattt 6431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 138  Q
    ||||||||||| || ||||||||||| ||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 9036003 - 9036230
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036003 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 9036102  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||||||||| ||| |||| |  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    |    
T  9036103 agggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgtta 9036202  T
Q  280 cgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||||||||||||||| |||||||||||    
T  9036203 cgcagatcgtgacacga-ttgggaaaatc 9036230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 44203218 - 44203445
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  44203218 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 44203316  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44203317 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 44203415  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  44203416 gacgcaaatcgtgacacga-ttgggaaaatc 44203445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 80 - 301
Target Start/End: Complemental strand, 20622821 - 20622599
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||  ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  20622721 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggt 20622622  T
Q  279 acgcagatcgtgacacgatttgg 301  Q
    ||||| |||||| || |||||||    
T  20622621 acgcaaatcgtggcatgatttgg 20622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 40281957 - 40282179
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||    
T  40281957 ctgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggtt 40282056  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | |||||||||    
T  40282057 gcagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggac 40282156  T
Q  277 ggacgca--gatcgtgacacgat 297  Q
    ||| |||   |||||||||||||    
T  40282157 ggatgcaccaatcgtgacacgat 40282179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 21053539 - 21053760
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||  ||    
T  21053539 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatg 21053638  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    || ||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | ||||| ||||    
T  21053639 caaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgagacg 21053738  T
Q  278 gacgca--gatcgtgacacgat 297  Q
    || |||   |||||||||||||    
T  21053739 gatgcaccaatcgtgacacgat 21053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 9986784 - 9987005
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||||| ||||||||||||| |  |    
T  9986784 ctgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtct 9986883  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||| |||| || |||||||||||||| || |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||| | ||||||||||    
T  9986884 gcagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacg 9986983  T
Q  278 gacgca--gatcgtgacacgat 297  Q
    || |||   |||||||||||||    
T  9986984 gatgcaccaatcgtgacacgat 9987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 299
Target Start/End: Original strand, 19360912 - 19361134
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | |||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| |||   |||||||| |||||| ||||| ||||     
T  19361012 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgt 19361111  T
Q  279 acg--cagatcgtgacacgattt 299  Q
    |||  |  |||||||||||||||    
T  19361112 acgtaccaatcgtgacacgattt 19361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 80 - 242
Target Start/End: Original strand, 19365768 - 19365931
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 19365867  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaa 242  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | |||||||||||||||    
T  19365868 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 80 - 299
Target Start/End: Original strand, 51764990 - 51765212
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||| | ||||||||||| | |||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 51765089  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||| | ||||| ||||     
T  51765090 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgtgacgt 51765189  T
Q  279 acg--cagatcgtgacacgattt 299  Q
    |||  |  |||||||||||||||    
T  51765190 acgtaccaatcgtgacacgattt 51765212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 39446082 - 39445866
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | ||||||||| | || |||    
T  39446082 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtttg 39445984  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || ||||| ||||||||||  |||||||||||||||||||||  | |||||||||||||   ||| ||||| |    
T  39445983 caggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtc-aacctggggaccg 39445885  T
Q  279 acgcagatcgtgacacgat 297  Q
      |||||||||||||||||    
T  39445884 ttgcagatcgtgacacgat 39445866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 44023377 - 44023593
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  44023377 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 44023475  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    | || |||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |    
T  44023476 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccg 44023574  T
Q  279 acgcagatcgtgacacgat 297  Q
      |||||||||||||||||    
T  44023575 ttgcagatcgtgacacgat 44023593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 24202251 - 24202376
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  179 cagggtgcaaattcgtgacacgattt 204  Q
    |||||||| || ||||||||||||||    
T  24202351 cagggtgccaaatcgtgacacgattt 24202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 264
Target Start/End: Complemental strand, 41391173 - 41391002
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||||||| || |||||||  || || |    
T  41391173 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaat 41391075  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| |||||| | || ||||||||||| |||   ||||||||||| |||||||||  | |||||||||||||    
T  41391074 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtc 41391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 142 - 297
Target Start/End: Original strand, 24793709 - 24793864
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 24793808  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat 297  Q
    ||||||||| |||||||||||||   ||||||| | |||||| |||||||||||||    
T  24793809 agtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgat 24793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 25439406 - 25439615
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 185  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||||| | | ||||||||| | || ||||||| ||    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggatg 25439504  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 285  Q
    |||| ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  |||||    
T  25439505 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc-aacctggggactgttgcaga 25439603  T
Q  286 tcgtgacacgat 297  Q
    ||||||||||||    
T  25439604 tcgtgacacgat 25439615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 264
Target Start/End: Original strand, 1054514 - 1054698
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||| || | ||||||||||| | || |||    
T  1054514 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacga-ttggaggtgccgtgagccaagtttg 1054612  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  1054613 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 1054698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 25444599 - 25444808
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 185  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||||| | | ||||||||| | || ||| ||| ||    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttgtaggatg 25444697  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 285  Q
    |||| ||||| |||||| | || ||||||||||||||||  |||||||| | ||||||||||  | |||||||||||||   ||| ||||| |  |||||    
T  25444698 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc-aacctagggaccgttgcaga 25444796  T
Q  286 tcgtgacacgat 297  Q
    ||||||||||||    
T  25444797 tcgtgacacgat 25444808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 13604095 - 13604260
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| | | || |||||||| | |||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    ||| |||  || |||||||||||||| |   |||||||||| |||  | ||||||||| |||||||    
T  13604195 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 24786905 - 24787042
Alignment:
Q  160 ggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggac 259  Q
    ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||    
T  24786905 ggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 24787004  T
Q  260 tggtcgttccttgggacggacgcagatcgtgacacgat 297  Q
    |||||   ||||||| | |||||| |||||||||||||    
T  24787005 tggtcaaaccttgggtcagacgcaaatcgtgacacgat 24787042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 24793666 - 24793723
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24793666 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 41398778 - 41398657
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||| | | |||||||||| || |||||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||| |||    
T  41398778 atcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  242 agtatccttaataaggactggtc 264  Q
    |||||| || |||||||||||||    
T  41398679 agtatcattgataaggactggtc 41398657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 41398823 - 41398764
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||  ||| |||||||||||||||||| |||||||| ||||||||||||||||||    
T  41398823 actgttgattttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 13599017 - 13598967
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13599017 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 21536125 - 21536170
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 24202379 - 24202450
Alignment:
Q  228 aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtgacacgat 297  Q
    ||||||||||||||||||||||| ||||||||||||| |  ||||||||| |||  || |||||||||||||    
T  24202379 aaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgat 24202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 37070378 - 37070334
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 26644381 - 26644450
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 156  Q
    |||| ||| ||||||||||| ||||||||||| | |||||||| |||||||||  ||||| |||||||||    
T  26644381 attggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 43988054 - 43988133
Alignment:
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  43988054 gcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 43988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 3282318 - 3282273
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||||||||||||  ||||||||||  |||||||||||||||||    
T  3282318 cttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 13659897 - 13659840
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  13659897 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  96 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 80 - 301
Target Start/End: Original strand, 6716085 - 6716306
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716085 tgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 6716184  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  6716185 agggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 6716284  T
Q  280 cgcagatcgtgacacgatttgg 301  Q
    ||| ||||||||||||||||||    
T  6716285 cgcggatcgtgacacgatttgg 6716306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 3617034 - 3617261
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  3617034 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgga-tgccgtgagctagggttg 3617132  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  3617133 caggggtgcaaat-cgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacg 3617231  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  3617232 gacgcaaatcgtgacacga-ttgggaaaatc 3617261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 54634710 - 54634937
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  54634710 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagttgc 54634809  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||  | |    
T  54634810 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcttttcttgggtggta 54634909  T
Q  280 cgcagatcgtgacacgatttgggaaaatc 308  Q
    |||| ||| |||||||| |||||||||||    
T  54634910 cgcaaatcatgacacga-ttgggaaaatc 54634937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 78 - 298
Target Start/End: Original strand, 10055803 - 10056024
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-t 176  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |    
T  10055803 actgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggt 10055901  T
Q  177 tgcaggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggg 274  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10055902 tgcaggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 10056000  T
Q  275 acggacgcagatcgtgacacgatt 298  Q
    ||||||||| ||||||||||||||    
T  10056001 acggacgcaaatcgtgacacgatt 10056024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 25637013 - 25637240
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| | |||||||| |||    
T  25637013 tgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgc-gagagctagggttg 25637111  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25637112 caggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25637210  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  25637211 gacgcaaatcgtgacacga-ttgggaaaatc 25637240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 10066915 - 10067134
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10066915 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10067013  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10067014 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10067112  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  10067113 ggacgcaaatcgtgacacgatt 10067134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 10058027 - 10058246
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10058027 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10058125  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10058126 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10058224  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    | ||||| ||||||||||||||    
T  10058225 gtacgcaaatcgtgacacgatt 10058246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 10060249 - 10060468
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10060249 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10060347  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10060348 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10060446  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    | ||||| ||||||||||||||    
T  10060447 gtacgcaaatcgtgacacgatt 10060468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 10062471 - 10062690
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10062471 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10062569  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10062570 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10062668  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    | ||||| ||||||||||||||    
T  10062669 gtacgcaaatcgtgacacgatt 10062690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 10064693 - 10064912
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10064693 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10064791  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10064792 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10064890  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    | ||||| ||||||||||||||    
T  10064891 gtacgcaaatcgtgacacgatt 10064912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 4599107 - 4598879
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||| |||    
T  4599107 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcgga-tgccgtgagctagggttg 4599009  T
Q  179 caggg-tgcaaattcgtgacacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| ||||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4599008 caggggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4598910  T
Q  277 ggacgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||||| |||||||||||| |||||||||||    
T  4598909 ggacgcaaatcgtgacacga-ttgggaaaatc 4598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 4601328 - 4601100
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||| |||    
T  4601328 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcgga-tgccgtgagctagggttg 4601230  T
Q  179 caggg-tgcaaattcgtgacacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| ||||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4601229 caggggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4601131  T
Q  277 ggacgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||||| |||||||||||| |||||||||||    
T  4601130 ggacgcaaatcgtgacacga-ttgggaaaatc 4601100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 142 - 308
Target Start/End: Original strand, 45282628 - 45282793
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 45282727  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||||||| |||||||||||||||| ||||||  | |||||||||||||||||| |||||||||||    
T  45282728 agtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacga-ttgggaaaatc 45282793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 10208778 - 10208997
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10208778 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10208876  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10208877 caggggtgcaaat-cgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttgggac 10208975  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  10208976 ggacgcaaatcgtgacacgatt 10208997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 10210978 - 10211206
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||| |||| |||    
T  10210978 tgttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttagga-tgccgtgagttagggttg 10211076  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| |||||||| ||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10211077 caggggtgcaaat-cgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10211175  T
Q  277 ggacgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||||| |||||||||||| |||||||||||    
T  10211176 ggacgcaaatcgtgacacga-ttgggaaaatc 10211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 79 - 297
Target Start/End: Complemental strand, 8478003 - 8477785
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||    
T  8478003 ctgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttg 8477904  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    | || ||| || ||||| |||||| | || ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  8477903 ctggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 8477804  T
Q  279 acgcagatcgtgacacgat 297  Q
    ||||| |||||||||||||    
T  8477803 acgcaaatcgtgacacgat 8477785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 40372256 - 40372473
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  40372256 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 40372355  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | ||| || |||||    
T  40372356 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacgga 40372455  T
Q  280 cgcagatcgtgacacgat 297  Q
    |||| |||||| ||||||    
T  40372456 cgcaaatcgtgccacgat 40372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 6718331 - 6718489
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtta 6718430  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttg 300  Q
    ||||||||| |||||||||||||||| ||||||  | |||| |||||||||||||||||    
T  6718431 agtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgacacgatttg 6718489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 80 - 300
Target Start/End: Complemental strand, 7167882 - 7167662
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||  ||||||||||||||| ||||    
T  7167882 tgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgc 7167783  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | ||||||| | ||    
T  7167782 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcaga 7167683  T
Q  280 cgcagatcgtgacacgatttg 300  Q
    |||| ||||||||||||||||    
T  7167682 cgcaaatcgtgacacgatttg 7167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 78 - 283
Target Start/End: Original strand, 800683 - 800889
Alignment:
Q  78 actgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggt 176  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |    
T  800683 actgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtt 800782  T
Q  177 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||| |||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | ||||||| |||||||| ||||||||    
T  800783 tgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtcgtttcttgggac 800882  T
Q  277 ggacgca 283  Q
    | |||||    
T  800883 gaacgca 800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 22172662 - 22172886
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||    
T  22172662 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 22172761  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||||| |||  | |||||||||||||   ||||||  | |     
T  22172762 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtc-aaccttggttccgt 22172860  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
     ||| |||||||||||||||||||||    
T  22172861 tgcaaatcgtgacacgatttgggaaa 22172886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 28501152 - 28501377
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  28501152 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28501251  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||   | || ||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||| | ||||||||| |||   ||||||| | ||    
T  28501252 aggacaccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtcaga 28501350  T
Q  280 cgcagatcgtgacacgat-ttgggaaa 305  Q
    |||| ||| ||||||||| ||||||||    
T  28501351 cgcaaatcatgacacgatcttgggaaa 28501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 80 - 301
Target Start/End: Complemental strand, 23198530 - 23198306
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||| | | ||||||||||| | |||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || ||||||||||||||||   ||||||||||||||    ||||||||||||||||| |||   ||||||||||||||| ||||| ||||     
T  23198430 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacgt 23198331  T
Q  279 acg--cagatcgtgacacgatttgg 301  Q
    |||  |  |||||||||||||||||    
T  23198330 acgtaccaatcgtgacacgatttgg 23198306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 96 - 301
Target Start/End: Original strand, 27352097 - 27352302
Alignment:
Q  96 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtg 195  Q
    ||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||  ||||||||||||| | ||||||    | || |||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcagaacaccaaatcgtg 27352196  T
Q  196 acacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacg 295  Q
     |||||| | || |||||||||||||||   |||||||||||||||| ||||  | ||||||||||||| | |||||||||||||||| |||||||||||    
T  27352197 gcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgacacg 27352296  T
Q  296 atttgg 301  Q
    ||||||    
T  27352297 atttgg 27352302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 1306604 - 1306406
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||| |||||||||||||||| |||||||||||| || ||||| ||||||||||||||||| |||| |||||||| | |||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| |||   |||||||| |||||| ||||| ||||    
T  1306504 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 1306406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 28503319 - 28503544
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  28503319 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28503418  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
     ||  || || ||||| |||||| | || |||||||||||| ||   |||||||||||||||||||||| | ||||||||| |||   ||||||| | ||    
T  28503419 tggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtcaga 28503517  T
Q  280 cgcagatcgtgacacgat-ttgggaaa 305  Q
    |||| ||||||||||||| ||||||||    
T  28503518 cgcaaatcgtgacacgatcttgggaaa 28503544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 272
Target Start/End: Complemental strand, 23200729 - 23200536
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||| ||||||| | |||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttg 272  Q
    |||||||| || ||||||||||||||||   ||||||||||||||    ||||||||||||||||| |||   ||||||||||||||| |||||    
T  23200629 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttg 23200536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 18657029 - 18656812
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtg-agctaggttg 178  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||| ||| || |||    
T  18657029 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttg 18656930  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |    
T  18656929 caggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccg 18656831  T
Q  279 acgcagatcgtgacacgat 297  Q
      |||||||||||||||||    
T  18656830 ttgcagatcgtgacacgat 18656812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 126 - 299
Target Start/End: Original strand, 2671111 - 2671284
Alignment:
Q  126 gtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcg 225  Q
    ||||||||||||||| ||||||||| ||||||  ||||||||||||||| ||||||| ||| || ||||| |||||| | || |||||||||||||||      
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattt 2671210  T
Q  226 tgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgattt 299  Q
     |||||||||||||||||||||||| ||||||||||||| | |||||||  | ||||| |||||||||||||||    
T  2671211 agaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattt 2671284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 7782712 - 7782586
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||| ||||||| | |||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  179 cagggtgcaaattcgtgacacgatttg 205  Q
    |||||||| || |||||||||||||||    
T  7782612 cagggtgccaaatcgtgacacgatttg 7782586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 26928080 - 26928245
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |   ||||||||||| | |||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 26928179  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||||||| || ||||||||| || | |   ||||||||||||||  | |||||||||||||||||    
T  26928180 cagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagt 26928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 33386137 - 33386302
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 33386236  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||||||| || |||||||||||||| |   ||||||||||||||  | ||||||||| |||||||    
T  33386237 cagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 8738585 - 8738736
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  8738585 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 8738684  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgaca 293  Q
    ||||||||| ||||||||||||| | |||||| ||||||||| |||||||||    
T  8738685 agtatccttgataaggactggtcataccttggaacggacgcaaatcgtgaca 8738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 9090823 - 9090974
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  9090823 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 9090922  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgaca 293  Q
    ||||||||| ||||||||||||| | |||||| ||||||||| |||||||||    
T  9090923 agtatccttgataaggactggtcataccttggaacggacgcaaatcgtgaca 9090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 37726299 - 37726134
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||| | | ||||||||||| | |||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggtttg 37726200  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||||||  || |||||||||||||| |   ||||||||||||||  | ||||||| | |||||||    
T  37726199 cagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagt 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 37408036 - 37408200
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||| ||| ||||||||||||||| |  |||||||||||| | |||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    |||||||  || ||||| ||||| ||| | |||||||||||||||  | ||||||| | |||||||    
T  37408136 cagggtgtcaaatcgtggcacga-ttgtgtaaatcgtgacacgattttcaaacttgttggttaagt 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 6718288 - 6718345
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 27453581 - 27453416
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||| ||| ||||| ||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  27453581 tgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 27453482  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
     ||||||| || |||||||| ||||  |   ||||||||||||||  | ||||||||| |||||||    
T  27453481 tagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagt 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 45282585 - 45282642
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282585 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 297
Target Start/End: Original strand, 2672431 - 2672635
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaaa 189  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||||||  |||| | ||||| ||| | || |||| ||  |||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga--tcggagatgccgggagccaagtttgctggaagcaaa 2672528  T
Q  190 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgt 289  Q
     ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  |||||||||    
T  2672529 atcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcagatcgt 2672627  T
Q  290 gacacgat 297  Q
    ||||||||    
T  2672628 gacacgat 2672635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 301
Target Start/End: Complemental strand, 32143884 - 32143723
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||| | | ||||||||||||| ||||||||||| || |||||||||||| | |   ||||||||||||||  | ||||||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgtta 32143785  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgca--gatcgtgacacgatttgg 301  Q
    ||| | |   |||||||| |||||| ||||| |||| ||| |   |||||||||||||||||    
T  32143784 agttttcaagataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttgg 32143723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 297
Target Start/End: Original strand, 2676587 - 2676791
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaaa 189  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||||||  |||| | || || ||| | || |||| ||  |||||    
T  2676587 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga--tcggagatgtcgggagccaagtttgctggaagcaaa 2676684  T
Q  190 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgt 289  Q
     ||||| |||||| | || |||||||||||||||   |||||||||| |||||| |||  | |||||||||||||   ||| ||||| |  |||||||||    
T  2676685 atcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtc-aacctggggaccgttgcagatcgt 2676783  T
Q  290 gacacgat 297  Q
    ||||||||    
T  2676784 gacacgat 2676791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 32143929 - 32143868
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32143929 ctgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  89 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 8738542 - 8738593
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 131  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  8738542 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgaca 8738593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 9090780 - 9090831
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 131  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  9090780 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgaca 9090831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 27974446 - 27974493
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27974446 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 36029709 - 36029658
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 138  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 36029658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 264
Target Start/End: Complemental strand, 8512820 - 8512643
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 185  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  8512820 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 8512722  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  8512721 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 8512643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 21711818 - 21711768
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21711818 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 27986001 - 27986103
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| || |||||||||||||  |   ||||||||||||||  | ||||||||| ||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggtta 27986100  T
Q  242 agt 244  Q
    |||    
T  27986101 agt 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 7782603 - 7782535
Alignment:
Q  209 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacg 7782535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 264
Target Start/End: Complemental strand, 32476066 - 32475887
Alignment:
Q  85 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg-caggg 183  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||   || | || |||||| | |||  | |      
T  32476066 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggag-gcagtgagccaagttctctgaa 32475968  T
Q  184 tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
     ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  32475967 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 32475887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 264
Target Start/End: Complemental strand, 32480924 - 32480745
Alignment:
Q  85 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg-caggg 183  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||   || | || |||||| | |||  | |      
T  32480924 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggag-gcagtgagccaagttctctgaa 32480826  T
Q  184 tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
     ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  32480825 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 32480745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 264
Target Start/End: Complemental strand, 8517700 - 8517523
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 185  Q
    |||| ||||||||| ||||| | | ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  8517700 attgacttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 8517602  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  8517601 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 8517523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 24968707 - 24968520
Alignment:
Q  77 gactgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgag-ctag 174  Q
    ||||||||  |||| ||||||||| ||||| ||||||||||  | ||||||| |||||||| |  ||||||||||||  ||||||  || ||||| | ||    
T  24968707 gactgttggaattgacttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacga--tcggggaggcagtgagccaag 24968610  T
Q  175 gttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
     |||| ||  ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||| ||  | |||||||||||||    
T  24968609 tttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc 24968520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 27985971 - 27986017
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 39032025 - 39032075
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  39032025 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 40735015 - 40735063
Alignment:
Q  89 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||||||||||||||| |||| ||||||  |||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgac 130  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  1730916 attggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 40845279 - 40845220
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 138  Q
    |||||||||| |||||||||||| || | ||| ||||||| |||||||||||||||||||    
T  40845279 tgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 27038658 - 27038608
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| |||||| |||||||| ||||| ||||| ||||||||||||||||||    
T  27038658 attggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 40592252 - 40592302
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| |||||    
T  40592252 attggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||| ||||||||||| || |||||||| ||||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 16498637 - 16498694
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  16498637 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 3439088 - 3439314
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3439088 tgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 3439187  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  3439188 agggtgcaaaatcgtgacacgatttggg-aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 3439286  T
Q  280 cgcagatcgtgacacgatttgggaaaatc 308  Q
    |||| |||||| ||||| |||||||||||    
T  3439287 cgcatatcgtggcacga-ttgggaaaatc 3439314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 15290143 - 15290362
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||||  ||||||||| |||| |||    
T  15290143 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcgga-tgccgtgagttagggttg 15290241  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  15290242 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggac 15290340  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  15290341 ggacgcaaatcgtgacacgatt 15290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 15470512 - 15470731
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||||  ||||||||| |||| |||    
T  15470512 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcgga-tgccgtgagttagggttg 15470610  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  15470611 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggac 15470709  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  15470710 ggacgcaaatcgtgacacgatt 15470731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 298
Target Start/End: Complemental strand, 42575909 - 42575690
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||| |||| |||    
T  42575909 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcgga-tgccgtgagttagggttg 42575811  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  42575810 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggac 42575712  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  42575711 ggacgcaaatcgtgacacgatt 42575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 4759534 - 4759751
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||    
T  4759534 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgc 4759633  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | |||||| |||||    
T  4759634 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacgga 4759733  T
Q  280 cgcagatcgtgacacgat 297  Q
    |||| |||||||||||||    
T  4759734 cgcaaatcgtgacacgat 4759751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 33037287 - 33037505
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  33037287 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 33037386  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||||||| |||||||||  | ||||||||||||| | |||||| |||||    
T  33037387 aggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacgga 33037486  T
Q  280 cgcagatcgtgacacgatt 298  Q
    |||| ||||||||||||||    
T  33037487 cgcaaatcgtgacacgatt 33037505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 78 - 297
Target Start/End: Complemental strand, 36980016 - 36979797
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||    
T  36980016 actgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagttt 36979917  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | |||||||  |    
T  36979916 gcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttg 36979817  T
Q  278 gacgcagatcgtgacacgat 297  Q
     ||||| |||||||||||||    
T  36979816 tacgcaaatcgtgacacgat 36979797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 79 - 301
Target Start/End: Original strand, 18852626 - 18852848
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||  ||||||||||||||| |||    
T  18852626 ctgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttg 18852725  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | ||||||| | |    
T  18852726 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcag 18852825  T
Q  279 acgcagatcgtgacacgatttgg 301  Q
    |||||||||||||||||||||||    
T  18852826 acgcagatcgtgacacgatttgg 18852848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 30656282 - 30656065
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  30656282 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 30656183  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| |||||||||||||   ||||||| | ||    
T  30656182 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcaga 30656083  T
Q  280 cgcagatcgtgacacgat 297  Q
    |||| |||||||||||||    
T  30656082 cgcaaatcgtgacacgat 30656065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 80 - 300
Target Start/End: Original strand, 18870021 - 18870241
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  | || |||||||||| ||||    
T  18870021 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgc 18870120  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||||||| | ||||||| | ||    
T  18870121 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcaga 18870220  T
Q  280 cgcagatcgtgacacgatttg 300  Q
    |||||||||||||||||||||    
T  18870221 cgcagatcgtgacacgatttg 18870241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 93 - 276
Target Start/End: Original strand, 1261428 - 1261611
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 192  Q
    |||||||||||||| ||||||||||  ||||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||| ||||||||||| || ||    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatc 1261527  T
Q  193 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    |||||||||| | || |||||||||||||||  | ||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  1261528 gtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggac 1261611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 264
Target Start/End: Original strand, 10683738 - 10683923
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||    
T  10683738 ctgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttg 10683837  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||    
T  10683838 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 10683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 80 - 283
Target Start/End: Original strand, 2627318 - 2627522
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | | ||||||||| | |||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtttg 2627417  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    || ||||| || |||||||||||||| || |||||||||||||||    ||||||||||||||||| ||| | ||||||| |||||||| |||| ||||     
T  2627418 catggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtcgtttcttgtgacgt 2627517  T
Q  279 acgca 283  Q
    |||||    
T  2627518 acgca 2627522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 78 - 305
Target Start/End: Original strand, 7289425 - 7289653
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggt 176  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||  ||| ||| |||||||| |    
T  7289425 actgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagtt 7289524  T
Q  177 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||||  || || |||||||||||| | ||||||||||||||||||   |||||||||||||||||||||| | ||||||||| ||| | ||||||  |    
T  7289525 tgcaggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttggatc 7289623  T
Q  277 ggacgcagatcgtgacacgat-ttgggaaa 305  Q
     || ||| ||||||||||||| ||||||||    
T  7289624 agatgcaaatcgtgacacgatcttgggaaa 7289653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 78 - 298
Target Start/End: Complemental strand, 6311937 - 6311718
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    |||||||  |||| ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||  ||||||||||||||| ||    
T  6311937 actgttgttattggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagttt 6311838  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| |||   ||||||| |     
T  6311837 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtc-aaccttgggtca 6311739  T
Q  278 gacgcagatcgtgacacgatt 298  Q
    || ||| ||||||||||||||    
T  6311738 gatgcaaatcgtgacacgatt 6311718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 25689604 - 25689759
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||  || ||||||| |||||||||||||||||||||||||    
T  25689604 atcgtgacacgatttcggg-tgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatt 298  Q
    ||||||||| ||||||||||||||||||||||   | || || ||||||||||||||    
T  25689703 agtatccttgataaggactggtcgttccttggtttgtacacaaatcgtgacacgatt 25689759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 26288517 - 26288319
Alignment:
Q  80 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | | ||||||||||| | |||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26288418  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || ||||||||| || | || |||||||||||| ||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  26288417 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 26288319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 26301774 - 26301576
Alignment:
Q  80 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | | ||||||||||| | |||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26301675  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || ||||||||| || | || |||||||||||| ||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  26301674 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 26301576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 26313768 - 26313570
Alignment:
Q  80 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | | ||||||||||| | |||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26313669  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || ||||||||| || | || |||||||||||| ||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  26313668 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 26313570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 39784324 - 39784541
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggtt 177  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || ||    
T  39784324 ctgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagttt 39784422  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    || || |||||| ||||| |||||| | || |||||||||||||||   |||||||| | ||||||||||  | |||||||||||||   ||| |||||     
T  39784423 gctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggacc 39784521  T
Q  278 gacgcagatcgtgacacgat 297  Q
    |  |||||||||||||||||    
T  39784522 gttgcagatcgtgacacgat 39784541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 31042907 - 31043032
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| | |||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| | ||    
T  31042907 ctgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggttt 31043006  T
Q  178 gcagggtgcaaattcgtgacacgatt 203  Q
    ||||||||| || |||||||||||||    
T  31043007 gcagggtgccaaatcgtgacacgatt 31043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 260
Target Start/End: Original strand, 25327664 - 25327844
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||  |  || ||||||||| ||||    
T  25327664 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgc 25327763  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggact 260  Q
    |||  || || || || |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||    
T  25327764 aggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 25327844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 7412939 - 7412787
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||  |   ||||||||||| | ||||||||||  || |    
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttgcagggtgtcaaat 7412840  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    ||||  || |||| |  |||||||||||||||  | ||||||||| |||||||    
T  7412839 cgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 10688661 - 10688816
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||  ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 10688760  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatt 298  Q
    ||||||  ||||||||||| |||   ||||||| | || ||| ||||||||||||||    
T  10688761 agtatcactaataaggacttgtc-aaccttgggtcagatgcaaatcgtgacacgatt 10688816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 25689561 - 25689618
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25689561 tgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 10688618 - 10688675
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10688618 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 35745971 - 35745762
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| |  ||      
T  35745971 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgttggaa 35745874  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  35745873 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtc-aacctggggaccgttgcag 35745775  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  35745774 atcgtgacacgat 35745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 5701959 - 5702009
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5701959 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 4456620 - 4456575
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 23799105 - 23799149
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||||||||||| || |||||||| |||||||| |||||||||    
T  23799105 ttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 5859 - 6087
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||  | |||||||||||||||| |||    
T  5859 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattg-gaggtgccgtgagctagggttg 5957  T
Q  179 cagggtgcaaattcgtgacacgatt-tgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5958 cagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6057  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  6058 gacgcaaatcgtgacacga-ttgggaaaatc 6087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 78 - 305
Target Start/End: Original strand, 8392980 - 8393207
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggt 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||    
T  8392980 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggt 8393078  T
Q  177 tgca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 275  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||| || ||||||     
T  8393079 tgcaggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggt 8393177  T
Q  276 cggacgcagatcgtgacacgatttgggaaa 305  Q
     | |||||||||||||||||||||||||||    
T  8393178 ggtacgcagatcgtgacacgatttgggaaa 8393207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 8395191 - 8395416
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  8395191 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8395289  T
Q  179 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    || ||||||||| ||||  |||||||||||||||||||||||| |||  |||||||||||||||||||||| | |||||||||||||||| ||||||  |    
T  8395290 caggggtgcaaa-tcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtgg 8395388  T
Q  278 gacgcagatcgtgacacgatttgggaaa 305  Q
     |||||||||||||||||||||||||||    
T  8395389 tacgcagatcgtgacacgatttgggaaa 8395416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 79 - 308
Target Start/End: Original strand, 7122266 - 7122494
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 177  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| ||    
T  7122266 ctgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcgga-tgccgtgagctagggtt 7122364  T
Q  178 gcaggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    |||||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7122365 gcaggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 7122463  T
Q  277 ggacgcagatcgtgacacgatttgggaaaatc 308  Q
    ||||||| |||||||||||| |||||||||||    
T  7122464 ggacgcaaatcgtgacacga-ttgggaaaatc 7122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 5135649 - 5135868
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  5135649 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 5135747  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5135748 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5135846  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  5135847 ggacgcaaatcgtgacacgatt 5135868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 298
Target Start/End: Original strand, 5137875 - 5138094
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  5137875 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 5137973  T
Q  179 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 276  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5137974 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5138072  T
Q  277 ggacgcagatcgtgacacgatt 298  Q
    ||||||| ||||||||||||||    
T  5138073 ggacgcaaatcgtgacacgatt 5138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 78 - 297
Target Start/End: Complemental strand, 24742579 - 24742360
Alignment:
Q  78 actgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||    
T  24742579 actgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagttt 24742480  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | ||| || |||    
T  24742479 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacg 24742380  T
Q  278 gacgcagatcgtgacacgat 297  Q
    |||||| |||||| ||||||    
T  24742379 gacgcaaatcgtgccacgat 24742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 80 - 272
Target Start/End: Original strand, 7124489 - 7124681
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 178  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  7124489 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 7124587  T
Q  179 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttg 272  Q
    || ||||||||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  7124588 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttg 7124681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 79 - 283
Target Start/End: Complemental strand, 31495903 - 31495698
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | ||    
T  31495903 ctgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 31495804  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  31495803 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacg 31495704  T
Q  278 gacgca 283  Q
     |||||    
T  31495703 aacgca 31495698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 80 - 305
Target Start/End: Complemental strand, 51521050 - 51520826
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  51521050 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 51520951  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || ||||| |||||||||   |||||||||||||||||||||| | |||||||||| || | ||||||| | ||    
T  51520950 aggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatc-taccttgggtcaga 51520852  T
Q  280 cgcagatcgtgacacgatttgggaaa 305  Q
    |||| |||||||||||||||||||||    
T  51520851 cgcaaatcgtgacacgatttgggaaa 51520826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 305
Target Start/End: Original strand, 56141511 - 56141737
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | || | |||||||||| ||||    
T  56141511 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgc 56141610  T
Q  180 agggtg-caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||  | |||| ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | |    
T  56141611 aggacgccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcag 56141709  T
Q  279 acgcagatcgtgacacgat-ttgggaaa 305  Q
    | ||| ||||||||||||| ||||||||    
T  56141710 atgcaaatcgtgacacgatcttgggaaa 56141737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 13992879 - 13992681
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | || |||||||| | |||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||||| || |||||||||||||||  | ||||||||||||||||| | | | ||||||||||||| | ||||| ||||    
T  13992779 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacg 13992681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 80 - 301
Target Start/End: Original strand, 28467977 - 28468201
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||| ||||||||| | | ||||||||||| | |||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggtttg 28468076  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||| | ||||||||||||||||||  | ||||||||||||||||| ||  | ||||||||||||||| ||||| ||||     
T  28468077 cagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgacgt 28468176  T
Q  279 acg--cagatcgtgacacgatttgg 301  Q
    |||  || |||||||||||| ||||    
T  28468177 acgtacaaatcgtgacacgacttgg 28468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 9223898 - 9224115
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| |||    
T  9223898 ctgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttg 9223997  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |    
T  9223998 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccg 9224096  T
Q  279 acgcagatcgtgacacgat 297  Q
      |||||||||||||||||    
T  9224097 ttgcagatcgtgacacgat 9224115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 9228686 - 9228902
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||| | ||||    
T  9228686 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgc 9228785  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  9228786 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 9228884  T
Q  280 cgcagatcgtgacacgat 297  Q
     |||||||||||||||||    
T  9228885 tgcagatcgtgacacgat 9228902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 5733247 - 5733030
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtg-agctaggttg 178  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||| ||| || |||    
T  5733247 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttg 5733148  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |    
T  5733147 caggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccg 5733049  T
Q  279 acgcagatcgtgacacgat 297  Q
      |||||||||||||||||    
T  5733048 ttgcagatcgtgacacgat 5733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 299
Target Start/End: Complemental strand, 29761196 - 29761039
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 29761097  T
Q  242 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgattt 299  Q
    ||||||||| ||||||||||||| | |||||| ||||||||| |||||| ||||||||    
T  29761096 agtatccttgataaggactggtcataccttggtacggacgcaaatcgtggcacgattt 29761039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 264
Target Start/End: Complemental strand, 18856309 - 18856125
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 178  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  18856309 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 18856211  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    | || |||||| ||||| || ||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  18856210 ctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 18856125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 264
Target Start/End: Complemental strand, 3814605 - 3814422
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |   |||| ||| || ||||    
T  3814605 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgc 3814506  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    | |  || || ||||| ||||||||||| |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  3814505 aagacgccaaatcgtgtcacgatttggg-aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 3814422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 45347324 - 45347501
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 185  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| || | | ||||||||| | || |||| || ||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacga-ttagagatgccgtgagccaagtttgctggatg 45347422  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  45347423 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 45347501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 31985127 - 31985252
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||| |||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | | ||||||||||| | |    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagttag 31985226  T
Q  179 cagggtgcaaattcgtgacacgattt 204  Q
    |||||||| || ||||||||||||||    
T  31985227 cagggtgccaaatcgtgacacgattt 31985252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 18712295 - 18712435
Alignment:
Q  120 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgaca 219  Q
    ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| |||||||  || || ||||| |||||| | || |||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgaca 18712394  T
Q  220 cgatcgtgaaacttgctcgttaagtatccttaataaggact 260  Q
    ||||   |||||||||||||||||||||  | |||||||||    
T  18712395 cgattcagaaacttgctcgttaagtatcactgataaggact 18712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 18860521 - 18860446
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 155  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18860521 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 5148294 - 5148196
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtg 185  Q
    |||| ||||||||||||||| |||||||| || |||||||||||||||||||   | ||||||||||||| |   || |||||||||| ||||||||||    
T  5148294 attggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttgcagggtg 5148196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 8689044 - 8689097
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 140  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8689044 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 29761227 - 29761182
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29761227 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 5143859 - 5143807
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5143859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 136  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 5268699 - 5268750
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 138  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  5268699 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 6742896 - 6742946
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  6742896 attggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 16622774 - 16622824
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 264
Target Start/End: Original strand, 45356861 - 45356982
Alignment:
Q  143 tcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    |||||||||||||| | | |||||||||| | ||| || || |||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||    
T  45356861 tcgtgacacgattt-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggtta 45356959  T
Q  242 agtatccttaataaggactggtc 264  Q
    ||||||  | |||||||||||||    
T  45356960 agtatcactgataaggactggtc 45356982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 54867795 - 54867745
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| |||||||| || ||| ||||||||||||||    
T  54867795 attggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 36314716 - 36314761
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 36328925 - 36328970
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 48142825 - 48142857
Alignment:
Q  191 tcgtgacacgatttgggaaaatcgtgacacgat 223  Q
    ||||||||||||||||||||| |||||||||||    
T  48142825 tcgtgacacgatttgggaaaaacgtgacacgat 48142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 52083041 - 52083009
Alignment:
Q  191 tcgtgacacgatttgggaaaatcgtgacacgat 223  Q
    ||||||||||||||||||||| |||||||||||    
T  52083041 tcgtgacacgatttgggaaaaacgtgacacgat 52083009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 52094048 - 52094016
Alignment:
Q  191 tcgtgacacgatttgggaaaatcgtgacacgat 223  Q
    ||||||||||||||||||||| |||||||||||    
T  52094048 tcgtgacacgatttgggaaaaacgtgacacgat 52094016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 3185 - 2958
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  3185 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 3087  T
Q  179 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    || ||||||||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  3086 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacg 2988  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  2987 gacgcaaatcgtgacacga-ttgggaaaatc 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 12647967 - 12647740
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  12647967 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 12647869  T
Q  179 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    || ||||||||| ||||| |||||||  || ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12647868 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 12647770  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||||| |||||||||||    
T  12647769 gacgcaaatcgtgacacga-ttgggaaaatc 12647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 9295862 - 9296079
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  9295862 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 9295961  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    ||| ||| || ||||| |||||| | || |||||||||||||||   ||||||||||| |||||||||||| ||||||||||||| | ||||||| ||||    
T  9295962 aggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcgga 9296061  T
Q  280 cgcagatcgtgacacgat 297  Q
    |||| |||||||||||||    
T  9296062 cgcaaatcgtgacacgat 9296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 79 - 297
Target Start/End: Complemental strand, 14292126 - 14291908
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| |||    
T  14292126 ctgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttg 14292027  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||||||| |  | ||||||||||||| | |||||||  |     
T  14292026 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgt 14291927  T
Q  279 acgcagatcgtgacacgat 297  Q
    ||||| |||||||||||||    
T  14291926 acgcaaatcgtgacacgat 14291908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 11098387 - 11098604
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||||||||||||||| ||||    
T  11098387 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgc 11098486  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||   |||||||  | |    
T  11098487 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgta 11098586  T
Q  280 cgcagatcgtgacacgat 297  Q
    |||| |||||||||||||    
T  11098587 cgcaaatcgtgacacgat 11098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 277
Target Start/End: Complemental strand, 25410253 - 25410068
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||| | | ||||||||||| || |    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttgcagggtgccaaat 25410154  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||||| | || |||||||||||||||  | ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||    
T  25410153 cgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttgtgacg 25410068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 79 - 283
Target Start/End: Original strand, 6266273 - 6266478
Alignment:
Q  79 ctgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 177  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||| |||||| | ||||||||||| | ||    
T  6266273 ctgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggttt 6266372  T
Q  178 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||||||| || |||||||||||||  || |||||||||||||||    |||||| |||||||||| ||| | ||||||| |||||||| |||||||||    
T  6266373 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtcgtttcttgggacg 6266472  T
Q  278 gacgca 283  Q
     |||||    
T  6266473 aacgca 6266478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 282
Target Start/End: Original strand, 32289148 - 32289351
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || || ||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||     
T  32289248 cagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 32289347  T
Q  279 acgc 282  Q
    ||||    
T  32289348 acgc 32289351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 3492377 - 3492179
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||| ||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 3492278  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||| | || |||||||||||||||  ||||||||||||||||||| |||   |||||||| |||||| ||||| ||||    
T  3492277 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 3492179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 4484923 - 4484725
Alignment:
Q  80 tgttgagattgt-cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||  | ||||||||||||| |||    
T  4484923 tgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtttg 4484824  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||| |     ||||||||||||||    ||||||||||||||||| ||  | ||||||||||||||| ||||||||||    
T  4484823 cagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacg 4484725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 277
Target Start/End: Original strand, 30832921 - 30833119
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||| || ||||  ||||||||||||||||| | ||||||||||| | |||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| |||   |||||||| |||||| ||||| ||||    
T  30833021 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 30833119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 297
Target Start/End: Original strand, 39811477 - 39811693
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |   |||| ||| || ||||    
T  39811477 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgc 39811576  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | ||||||||| ||| | ||||||| | |     
T  39811577 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtc-tgccttggggccgt 39811675  T
Q  280 cgcagatcgtgacacgat 297  Q
     |||||||||||||||||    
T  39811676 tgcagatcgtgacacgat 39811693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 301
Target Start/End: Complemental strand, 40739457 - 40739233
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||| |   ||||||||||| | |||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||| | |   ||| ||||||| ||  | ||||||||||||||||| | |   |||||||| |||||| ||||| ||||     
T  40739357 cagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacgt 40739258  T
Q  279 acgca--gatcgtgacacgatttgg 301  Q
    ||| |   |||||||||||||||||    
T  40739257 acgtatcaatcgtgacacgatttgg 40739233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 44310471 - 44310548
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 157  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  44310471 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 32247352 - 32247276
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 156  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32247352 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 36757425 - 36757477
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  36757425 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 28258682 - 28258729
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  28258682 cttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 33528105 - 33528155
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  33528105 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 39483493 - 39483443
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 20522838 - 20522794
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 131  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  20522838 attggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||| || |||| ||||||||||| ||||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 28258713 - 28258815
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||| |   ||||||||||| | ||||||||||  || ||||| ||| |||| |  |||||||||||||||  | ||||||||| ||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggtta 28258812  T
Q  242 agt 244  Q
    |||    
T  28258813 agt 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 223
Target Start/End: Complemental strand, 2334801 - 2334769
Alignment:
Q  191 tcgtgacacgatttgggaaaatcgtgacacgat 223  Q
    ||||||||||||||||||||| |||||||||||    
T  2334801 tcgtgacacgatttgggaaaaacgtgacacgat 2334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 80 - 308
Target Start/End: Complemental strand, 4310 - 4083
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  || |||||||||||||| |||    
T  4310 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttagg-tgccgtgagctagggttg 4212  T
Q  179 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4211 caggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 4113  T
Q  278 gacgcagatcgtgacacgatttgggaaaatc 308  Q
    |||||| |||||||||| | |||||||||||    
T  4112 gacgcaaatcgtgacac-aattgggaaaatc 4083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 80 - 299
Target Start/End: Complemental strand, 9308 - 9087
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||| |||||||| |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||     
T  9208 cagggtgccaaatcgtgacatgatttggg-aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 9110  T
Q  279 acgca--gatcgtgacacgattt 299  Q
    |||||   |||||||||||||||    
T  9109 acgcaccaatcgtgacacgattt 9087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 80 - 297
Target Start/End: Complemental strand, 11753 - 11534
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||  | ||||||||||| | |||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 11654  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || ||||||||||||||||| |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||     
T  11653 cagggtgccaaatcgtgacacgatttggg-aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 11555  T
Q  279 acgca--gatcgtgacacgat 297  Q
    |||||   |||||||||||||    
T  11554 acgcaccaatcgtgacacgat 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 299
Target Start/End: Original strand, 17431 - 17653
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 17530  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    |||||||| || |||||||||||| | || ||||||||||| |||  | ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||     
T  17531 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttgtgacgt 17630  T
Q  279 acg--cagatcgtgacacgattt 299  Q
    |||  |  |||||||||||||||    
T  17631 acgttccaatcgtgacacgattt 17653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 93 - 299
Target Start/End: Original strand, 21953 - 22161
Alignment:
Q  93 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 192  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||| ||||||||||||||||| ||||||||||||||| |||||||  || || ||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatc 22052  T
Q  193 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtg 290  Q
    |||||||||| | || ||||||||||||||| || ||||||||||||||||||||  | |||||||| |||||| ||||| |||| |||  |  ||||||    
T  22053 gtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttgtgacgtacgtaccaatcgtg 22152  T
Q  291 acacgattt 299  Q
    |||||||||    
T  22153 acacgattt 22161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 308
Target Start/End: Original strand, 3337 - 3564
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 179  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||||||||||  |  |||||||||||| |||     
T  3337 tgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttga 3436  T
Q  180 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 279  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| |||   ||| ||||| |     
T  3437 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtc-aacctggggaccgt 3535  T
Q  280 cgcagatcgtgacacgatttgggaaaatc 308  Q
     ||||||||||||||||| | ||||||||    
T  3536 tgcagatcgtgacacgatctaggaaaatc 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 264
Target Start/End: Complemental strand, 945 - 761
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 178  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  945 tgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 847  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    | || |||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  846 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 34553 - 34770
Alignment:
Q  79 ctgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||  |  ||||| || | | |||    
T  34553 ctgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttg 34652  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 278  Q
    || |  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |    
T  34653 catgacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccg 34751  T
Q  279 acgcagatcgtgacacgat 297  Q
      |||||||||||||||||    
T  34752 ttgcagatcgtgacacgat 34770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 120 - 277
Target Start/End: Original strand, 523 - 680
Alignment:
Q  120 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgaca 219  Q
    ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||| ||||||||||| || |||||||||||| | |   ||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgaca 622  T
Q  220 cgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 277  Q
    ||||  | ||| ||||||||||||| |||   ||| ||||||||||| ||||| ||||    
T  623 cgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacg 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 7911 - 8036
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||| | | |||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggtttg 8010  T
Q  179 cagggtgcaaattcgtgacacgattt 204  Q
    |||||||| || ||||||||||||||    
T  8011 cagggtgccaaatcgtgacacgattt 8036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 66; Significance: 4e-29; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 132752 - 132917
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 178  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| | | || |||||||| | |||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  179 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    ||| |||  || |||||||||||||| |   |||||||||| |||  | ||||||||| |||||||    
T  132852 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 6302 - 6252
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6302 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 3110 - 3060
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||||||||    
T  3110 attggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 149658 - 149601
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  149658 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 1709 - 1784
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 155  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1709 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 1096 - 1248
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    ||||||||||||||| || ||||||||  |||||||||||||||||||| ||||||||||||||| |   |  |||||| | | ||||||||||  || |    
T  1096 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaat 1195  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    ||||  ||||||| |  |||||||||||||||  | ||||||||| |||||||    
T  1196 cgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 260
Target Start/End: Complemental strand, 8230 - 8112
Alignment:
Q  142 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 241  Q
    ||||||||||||||||  |  |||||||||||| |||||||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 8131  T
Q  242 agtatccttaataaggact 260  Q
    ||||||  | |||||||||    
T  8130 agtatcactgataaggact 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 8273 - 8216
Alignment:
Q  80 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 137  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8273 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 43447 - 43599
Alignment:
Q  92 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 191  Q
    |||||||||| |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||| |   || |||||||| | || |||||||  || |    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtttacagggtgtcaaat 43546  T
Q  192 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 244  Q
    ||||  ||||||| |  ||||||||||| |||  | ||||||||| |||||||    
T  43547 cgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagt 43599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 36332 - 36384
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  36332 attggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 1746 - 1955
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 184  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  1746 attgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 1843  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||||||||| |  ||||    
T  1844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcag 1942  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  1943 atcgtgacacgat 1955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 148451 - 148660
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 184  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  148451 attgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 148548  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||||||||| |  ||||    
T  148549 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcag 148647  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  148648 atcgtgacacgat 148660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 13791 - 13968
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 185  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  13791 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 13889  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  13890 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 13968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 297
Target Start/End: Original strand, 18671 - 18880
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 184  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| | |||||| |  |||||||||||||  ||| | | | |||||||| ||| || ||      
T  18671 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagaggcagtgagctaagtttgctggaa 18768  T
Q  185 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 284  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||| ||||||||  |||| ||||| |  |||     
T  18769 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtc-atcctggggaccgttgcaa 18867  T
Q  285 atcgtgacacgat 297  Q
    |||||||||||||    
T  18868 atcgtgacacgat 18880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 176457 - 176634
Alignment:
Q  87 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 185  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  176457 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 176555  T
Q  186 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 264  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  176556 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 45804 - 45744
Alignment:
Q  80 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 139  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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