View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_low_72 (Length: 303)
Name: NF16077_low_72
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_low_72 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 22 - 286
Target Start/End: Original strand, 27764882 - 27765137
Alignment:
| Q |
22 |
ataacctaatgccatggtggtgtgcttgaccgtgtcaacatcacctccaaacctcaatgagggtagaaggccaagtccttgagtccaaggcccaataagg |
121 |
Q |
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| T |
27764882 |
ataacctcatgtcatggtggtgcgcttgaccgtgtcaacatcacctccaaacctcaatgagggtagaaggccaagtccttgagtccaaggcccaataa-- |
27764979 |
T |
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| Q |
122 |
cacataaggcaaaacacataccacctatgacattgaagttgtgcatcgagtaataaagccttgagagtctatttgagttgcctaaatgatcaagcatccg |
221 |
Q |
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| T |
27764980 |
-------ggcaaaacacataccacctatgacattgaagttgtgtatcgagtaataaagccttgagagtctatttgagtctcctaaatgatcaagcatccg |
27765072 |
T |
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| Q |
222 |
ttcaatcattacgtcgagaatggcacaaccatctaagttgttcatgcttatatggcacactcaat |
286 |
Q |
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| T |
27765073 |
tccaatcataacgtcgagaatggcacaaccatctaagttgttcatgcttatatggcacactcaat |
27765137 |
T |
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