View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16077_low_8 (Length: 606)

Name: NF16077_low_8
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16077_low_8
NF16077_low_8
[»] chr5 (75 HSPs)
chr5 (18-237)||(37231811-37232030)
chr5 (360-588)||(40379678-40379905)
chr5 (360-588)||(16546216-16546443)
chr5 (360-588)||(40381889-40382116)
chr5 (360-585)||(10592844-10593068)
chr5 (360-588)||(16543994-16544221)
chr5 (360-579)||(22536633-22536852)
chr5 (360-588)||(25077706-25077933)
chr5 (360-588)||(25135675-25135902)
chr5 (359-579)||(29719964-29720188)
chr5 (238-358)||(1240078-1240198)
chr5 (373-577)||(24136266-24136470)
chr5 (237-358)||(6747043-6747164)
chr5 (360-585)||(27450185-27450409)
chr5 (360-585)||(27445342-27445566)
chr5 (238-358)||(6744801-6744921)
chr5 (360-563)||(9789605-9789809)
chr5 (360-563)||(18442029-18442233)
chr5 (360-563)||(26177466-26177670)
chr5 (358-585)||(43599093-43599320)
chr5 (358-585)||(43604585-43604812)
chr5 (358-585)||(43610077-43610304)
chr5 (238-354)||(10529522-10529638)
chr5 (360-544)||(30631764-30631948)
chr5 (237-358)||(4409796-4409917)
chr5 (360-538)||(29722152-29722332)
chr5 (372-563)||(26170370-26170561)
chr5 (360-575)||(1456638-1456852)
chr5 (360-483)||(29752266-29752390)
chr5 (54-206)||(37222912-37223063)
chr5 (237-353)||(40222413-40222529)
chr5 (360-562)||(16407641-16407844)
chr5 (240-351)||(39854226-39854337)
chr5 (238-353)||(42237954-42238069)
chr5 (360-581)||(29751523-29751724)
chr5 (360-527)||(29402550-29402717)
chr5 (360-544)||(15045096-15045279)
chr5 (360-562)||(16409077-16409280)
chr5 (360-484)||(15465000-15465125)
chr5 (422-585)||(43592648-43592811)
chr5 (367-577)||(28807083-28807292)
chr5 (54-173)||(37216936-37217055)
chr5 (238-323)||(2298443-2298528)
chr5 (237-353)||(22672503-22672619)
chr5 (237-321)||(35385879-35385963)
chr5 (372-484)||(36931856-36931968)
chr5 (358-524)||(9352805-9352972)
chr5 (237-321)||(25452145-25452229)
chr5 (238-321)||(25445219-25445302)
chr5 (372-543)||(37556137-37556308)
chr5 (372-543)||(37560959-37561130)
chr5 (442-581)||(38219806-38219947)
chr5 (244-321)||(1170470-1170547)
chr5 (360-417)||(31180773-31180830)
chr5 (367-577)||(33768555-33768764)
chr5 (367-577)||(33791687-33791896)
chr5 (360-417)||(43592797-43592854)
chr5 (367-544)||(2785778-2785955)
chr5 (422-585)||(31180624-31180787)
chr5 (489-577)||(35388079-35388169)
chr5 (367-417)||(14520796-14520846)
chr5 (243-353)||(17841706-17841816)
chr5 (237-288)||(31179883-31179934)
chr5 (360-409)||(35388196-35388246)
chr5 (237-286)||(21684921-21684970)
chr5 (237-286)||(34479924-34479973)
chr5 (238-286)||(2174680-2174728)
chr5 (238-286)||(25921944-25921992)
chr5 (367-434)||(31396497-31396564)
chr5 (360-403)||(43625605-43625648)
chr5 (367-417)||(12083658-12083708)
chr5 (372-417)||(11916457-11916502)
chr5 (237-286)||(34477584-34477633)
chr5 (242-286)||(4236374-4236418)
chr5 (238-286)||(39797849-39797897)
[»] chr6 (78 HSPs)
chr6 (360-585)||(16578876-16579101)
chr6 (360-585)||(16616279-16616504)
chr6 (360-585)||(16554454-16554679)
chr6 (360-585)||(16631010-16631235)
chr6 (359-588)||(25420796-25421024)
chr6 (368-578)||(27647476-27647686)
chr6 (360-578)||(34166666-34166885)
chr6 (368-578)||(13150857-13151068)
chr6 (360-588)||(6026834-6027061)
chr6 (360-588)||(6136320-6136547)
chr6 (360-578)||(33342469-33342688)
chr6 (360-578)||(34164444-34164663)
chr6 (422-585)||(16652759-16652922)
chr6 (237-355)||(26084724-26084842)
chr6 (360-559)||(411685-411886)
chr6 (372-577)||(5674242-5674447)
chr6 (237-353)||(1230652-1230768)
chr6 (360-527)||(30125018-30125185)
chr6 (237-355)||(26064755-26064873)
chr6 (242-358)||(22343215-22343331)
chr6 (373-579)||(2171882-2172090)
chr6 (357-557)||(22709447-22709648)
chr6 (238-355)||(28241744-28241860)
chr6 (360-555)||(3073147-3073343)
chr6 (360-585)||(11857343-11857567)
chr6 (360-577)||(14741926-14742142)
chr6 (237-358)||(22352266-22352387)
chr6 (483-588)||(25421014-25421118)
chr6 (360-577)||(22010189-22010405)
chr6 (360-485)||(6097860-6097986)
chr6 (422-578)||(5266454-5266610)
chr6 (237-323)||(17695297-17695383)
chr6 (360-544)||(6438899-6439083)
chr6 (238-353)||(26887639-26887754)
chr6 (360-484)||(26253589-26253714)
chr6 (237-353)||(13878379-13878495)
chr6 (237-321)||(13883127-13883211)
chr6 (238-322)||(25466347-25466431)
chr6 (237-321)||(31249160-31249244)
chr6 (237-321)||(35201772-35201856)
chr6 (238-353)||(26642829-26642944)
chr6 (238-353)||(26748795-26748910)
chr6 (238-321)||(30975145-30975228)
chr6 (238-321)||(30981584-30981667)
chr6 (238-321)||(30987748-30987831)
chr6 (360-463)||(34151828-34151931)
chr6 (237-321)||(35209007-35209091)
chr6 (238-353)||(16785572-16785687)
chr6 (251-321)||(25941330-25941400)
chr6 (360-417)||(16652716-16652773)
chr6 (238-353)||(13467920-13468036)
chr6 (367-577)||(16839114-16839323)
chr6 (372-524)||(23896792-23896944)
chr6 (422-577)||(14737128-14737282)
chr6 (359-417)||(5266596-5266654)
chr6 (359-417)||(14737084-14737142)
chr6 (456-577)||(28155167-28155287)
chr6 (367-577)||(33329940-33330149)
chr6 (237-284)||(33215498-33215545)
chr6 (294-353)||(33215534-33215593)
chr6 (367-577)||(33335437-33335646)
chr6 (367-577)||(6005790-6005999)
chr6 (489-579)||(6097785-6097877)
chr6 (237-313)||(15533145-15533221)
chr6 (238-286)||(14507668-14507716)
chr6 (367-415)||(28155097-28155145)
chr6 (465-544)||(5343880-5343959)
chr6 (367-434)||(5343990-5344057)
chr6 (367-417)||(5016976-5017026)
chr6 (367-417)||(31085953-31086003)
chr6 (238-292)||(15541625-15541679)
chr6 (359-417)||(5571748-5571806)
chr6 (237-283)||(26066566-26066612)
chr6 (237-283)||(33308684-33308730)
chr6 (237-283)||(33310953-33310999)
chr6 (391-524)||(5756983-5757116)
chr6 (367-412)||(21272469-21272514)
chr6 (238-283)||(26068837-26068882)
[»] chr7 (66 HSPs)
chr7 (355-588)||(18392553-18392785)
chr7 (360-578)||(32060670-32060888)
chr7 (360-588)||(6592694-6592921)
chr7 (360-579)||(20343500-20343719)
chr7 (360-588)||(6594910-6595137)
chr7 (359-581)||(24789425-24789648)
chr7 (360-588)||(1562360-1562587)
chr7 (360-578)||(21640205-21640423)
chr7 (359-577)||(2058388-2058605)
chr7 (458-588)||(18389117-18389246)
chr7 (359-578)||(20357027-20357246)
chr7 (240-358)||(40946076-40946194)
chr7 (372-579)||(43504499-43504708)
chr7 (372-557)||(21646445-21646630)
chr7 (358-557)||(39730931-39731131)
chr7 (360-588)||(12406630-12406857)
chr7 (403-577)||(1532947-1533121)
chr7 (360-557)||(18409201-18409399)
chr7 (360-557)||(18414077-18414275)
chr7 (359-577)||(4873505-4873722)
chr7 (360-552)||(48408398-48408591)
chr7 (237-323)||(7464944-7465030)
chr7 (372-544)||(21811751-21811923)
chr7 (372-577)||(24023831-24024035)
chr7 (372-557)||(25767348-25767527)
chr7 (237-323)||(8378864-8378950)
chr7 (360-462)||(12397390-12397492)
chr7 (237-323)||(30246641-30246727)
chr7 (238-323)||(34547288-34547373)
chr7 (238-323)||(44512972-44513057)
chr7 (237-321)||(7074439-7074523)
chr7 (237-321)||(25405045-25405129)
chr7 (238-321)||(7069433-7069516)
chr7 (360-577)||(31109070-31109287)
chr7 (238-316)||(25351005-25351083)
chr7 (238-316)||(25356699-25356777)
chr7 (294-353)||(48457476-48457535)
chr7 (244-310)||(25409809-25409875)
chr7 (244-321)||(3320496-3320573)
chr7 (238-350)||(44144325-44144438)
chr7 (372-524)||(2479795-2479947)
chr7 (372-524)||(47264102-47264254)
chr7 (235-321)||(3325244-3325331)
chr7 (238-284)||(48457441-48457487)
chr7 (360-416)||(18390506-18390562)
chr7 (372-436)||(44847632-44847696)
chr7 (367-465)||(21983761-21983859)
chr7 (372-420)||(1532897-1532945)
chr7 (238-284)||(2120592-2120638)
chr7 (367-544)||(24265684-24265861)
chr7 (238-286)||(3878322-3878370)
chr7 (372-436)||(21989454-21989518)
chr7 (489-588)||(12397278-12397376)
chr7 (367-577)||(16880444-16880653)
chr7 (367-577)||(16885299-16885508)
chr7 (465-544)||(24260926-24261005)
chr7 (367-417)||(79955-80005)
chr7 (238-353)||(42006316-42006432)
chr7 (238-286)||(40837213-40837261)
chr7 (367-434)||(24260828-24260895)
chr7 (237-283)||(1047458-1047504)
chr7 (402-436)||(4509335-4509369)
chr7 (402-436)||(4511177-4511211)
chr7 (402-436)||(6431467-6431501)
chr7 (237-286)||(26804344-26804393)
chr7 (373-418)||(49092237-49092282)
[»] chr1 (50 HSPs)
chr1 (355-588)||(9035998-9036230)
chr1 (360-588)||(44203218-44203445)
chr1 (360-581)||(20622599-20622821)
chr1 (360-577)||(40281958-40282179)
chr1 (360-577)||(21053540-21053760)
chr1 (360-577)||(9986785-9987005)
chr1 (237-353)||(2617279-2617394)
chr1 (360-579)||(19360912-19361134)
chr1 (357-522)||(19365765-19365931)
chr1 (360-579)||(51764990-51765212)
chr1 (360-577)||(39445866-39446082)
chr1 (360-577)||(44023377-44023593)
chr1 (360-484)||(24202251-24202376)
chr1 (372-544)||(41391002-41391173)
chr1 (422-577)||(24793709-24793864)
chr1 (367-577)||(25439406-25439615)
chr1 (237-351)||(2393699-2393813)
chr1 (360-544)||(1054514-1054698)
chr1 (236-355)||(2401609-2401728)
chr1 (238-321)||(9521367-9521450)
chr1 (367-577)||(25444599-25444808)
chr1 (293-358)||(13449969-13450034)
chr1 (360-524)||(13604095-13604260)
chr1 (238-323)||(21353772-21353857)
chr1 (238-353)||(25133681-25133797)
chr1 (440-577)||(24786905-24787042)
chr1 (237-353)||(2232261-2232377)
chr1 (237-316)||(9526116-9526195)
chr1 (238-309)||(23689313-23689384)
chr1 (358-417)||(24793664-24793723)
chr1 (422-544)||(41398657-41398778)
chr1 (367-417)||(13598967-13599017)
chr1 (372-417)||(21536125-21536170)
chr1 (372-417)||(41398764-41398809)
chr1 (238-297)||(13461333-13461392)
chr1 (238-286)||(20291280-20291328)
chr1 (508-577)||(24202379-24202450)
chr1 (373-417)||(37070334-37070378)
chr1 (237-286)||(6822774-6822823)
chr1 (237-286)||(13761576-13761625)
chr1 (367-436)||(26644381-26644450)
chr1 (237-286)||(51752103-51752152)
chr1 (465-544)||(43988054-43988133)
chr1 (237-275)||(20302197-20302235)
chr1 (237-283)||(47177077-47177123)
chr1 (237-283)||(47179427-47179473)
chr1 (372-417)||(3282273-3282318)
chr1 (360-417)||(13659840-13659897)
chr1 (376-417)||(16124197-16124238)
chr1 (238-286)||(51749778-51749826)
[»] chr3 (119 HSPs)
chr3 (360-581)||(6716085-6716306)
chr3 (360-588)||(3617034-3617261)
chr3 (359-588)||(54634709-54634937)
chr3 (360-588)||(25637013-25637240)
chr3 (360-578)||(10055805-10056024)
chr3 (360-578)||(10066915-10067134)
chr3 (358-588)||(4601100-4601330)
chr3 (360-578)||(10058027-10058246)
chr3 (360-578)||(10060249-10060468)
chr3 (360-578)||(10062471-10062690)
chr3 (360-578)||(10064693-10064912)
chr3 (360-588)||(4598879-4599107)
chr3 (358-578)||(10208776-10208997)
chr3 (422-588)||(45282628-45282793)
chr3 (360-588)||(10210978-10211206)
chr3 (360-577)||(8477785-8478002)
chr3 (360-577)||(40372256-40372473)
chr3 (238-354)||(51727427-51727543)
chr3 (422-580)||(6718331-6718489)
chr3 (237-358)||(4308698-4308819)
chr3 (238-353)||(43225827-43225942)
chr3 (360-580)||(7167662-7167882)
chr3 (236-358)||(25690773-25690895)
chr3 (237-358)||(35918366-35918487)
chr3 (360-563)||(800685-800889)
chr3 (238-358)||(27101677-27101797)
chr3 (238-352)||(9605035-9605150)
chr3 (360-585)||(22172662-22172886)
chr3 (239-358)||(29956218-29956337)
chr3 (239-358)||(30005373-30005492)
chr3 (360-585)||(28501152-28501377)
chr3 (360-581)||(23198306-23198530)
chr3 (376-581)||(27352097-27352302)
chr3 (360-557)||(1306406-1306604)
chr3 (360-585)||(28503319-28503544)
chr3 (360-552)||(23200536-23200729)
chr3 (360-577)||(18656812-18657029)
chr3 (406-579)||(2671111-2671284)
chr3 (360-485)||(7782586-7782712)
chr3 (359-524)||(33386136-33386302)
chr3 (360-524)||(26928080-26928245)
chr3 (237-353)||(16461852-16461968)
chr3 (422-573)||(8738585-8738736)
chr3 (422-573)||(9090823-9090974)
chr3 (237-353)||(20031765-20031883)
chr3 (237-353)||(10949694-10949811)
chr3 (360-524)||(37726134-37726299)
chr3 (238-353)||(22627580-22627695)
chr3 (237-321)||(47878598-47878682)
chr3 (236-323)||(5858195-5858282)
chr3 (237-316)||(54192896-54192975)
chr3 (238-321)||(29914401-29914484)
chr3 (238-321)||(29963554-29963637)
chr3 (237-323)||(10595456-10595542)
chr3 (360-524)||(37408036-37408200)
chr3 (239-316)||(54188160-54188237)
chr3 (238-353)||(11079169-11079285)
chr3 (237-316)||(10208452-10208531)
chr3 (358-524)||(27453416-27453583)
chr3 (360-417)||(6718288-6718345)
chr3 (360-417)||(45282585-45282642)
chr3 (238-353)||(27762441-27762557)
chr3 (237-316)||(10100543-10100622)
chr3 (237-315)||(10896654-10896732)
chr3 (238-350)||(47883299-47883412)
chr3 (372-577)||(2672431-2672635)
chr3 (237-321)||(10094515-10094599)
chr3 (237-321)||(10201401-10201485)
chr3 (294-358)||(43228067-43228131)
chr3 (237-303)||(10901397-10901463)
chr3 (422-581)||(32143723-32143884)
chr3 (237-323)||(4535261-4535347)
chr3 (237-283)||(43228031-43228077)
chr3 (264-353)||(48390635-48390725)
chr3 (254-323)||(10613224-10613293)
chr3 (372-577)||(2676587-2676791)
chr3 (358-411)||(8738540-8738593)
chr3 (358-411)||(9090778-9090831)
chr3 (360-419)||(32143868-32143928)
chr3 (369-417)||(40734084-40734132)
chr3 (372-419)||(27974446-27974493)
chr3 (367-418)||(36029658-36029709)
chr3 (367-544)||(8512643-8512820)
chr3 (367-417)||(16264896-16264946)
chr3 (367-417)||(21711768-21711818)
chr3 (422-524)||(27986001-27986103)
chr3 (367-417)||(30709266-30709316)
chr3 (372-417)||(27027273-27027318)
chr3 (238-286)||(6302984-6303032)
chr3 (489-557)||(7782535-7782603)
chr3 (238-286)||(27543946-27543994)
chr3 (365-544)||(32475887-32476066)
chr3 (365-544)||(32480745-32480924)
chr3 (237-288)||(25388617-25388668)
chr3 (367-544)||(8517523-8517700)
chr3 (373-419)||(27985971-27986017)
chr3 (367-417)||(39032025-39032075)
chr3 (239-284)||(5191374-5191419)
chr3 (237-286)||(7606915-7606964)
chr3 (237-286)||(22114794-22114843)
chr3 (235-283)||(38210064-38210112)
chr3 (369-417)||(40735015-40735063)
chr3 (359-418)||(40845220-40845280)
chr3 (238-313)||(45882659-45882734)
chr3 (367-410)||(1730916-1730959)
chr3 (238-353)||(18162405-18162520)
chr3 (241-316)||(38002494-38002569)
chr3 (238-288)||(6066241-6066291)
chr3 (367-417)||(27038608-27038658)
chr3 (367-417)||(35926057-35926106)
chr3 (367-417)||(40592252-40592302)
chr3 (367-417)||(48438782-48438832)
chr3 (238-284)||(50493676-50493722)
chr3 (238-284)||(53896708-53896754)
chr3 (360-417)||(16498637-16498694)
chr3 (237-286)||(18097374-18097423)
chr3 (237-286)||(18099659-18099708)
chr3 (238-283)||(35777163-35777208)
chr3 (238-286)||(3859317-3859365)
[»] chr8 (48 HSPs)
chr8 (360-588)||(3439088-3439314)
chr8 (358-578)||(15290141-15290362)
chr8 (358-578)||(15470510-15470731)
chr8 (360-578)||(42575690-42575909)
chr8 (360-577)||(4759534-4759751)
chr8 (360-578)||(33037287-33037505)
chr8 (359-577)||(30656065-30656283)
chr8 (360-581)||(18852627-18852848)
chr8 (360-577)||(36979797-36980014)
chr8 (360-580)||(18870021-18870241)
chr8 (373-556)||(1261428-1261611)
chr8 (359-563)||(2627317-2627522)
chr8 (360-544)||(10683739-10683923)
chr8 (422-578)||(25689604-25689759)
chr8 (367-578)||(6311718-6311928)
chr8 (360-585)||(7289427-7289653)
chr8 (246-353)||(22685090-22685197)
chr8 (360-557)||(26288319-26288517)
chr8 (360-557)||(26301576-26301774)
chr8 (360-557)||(26313570-26313768)
chr8 (360-577)||(39784325-39784541)
chr8 (360-483)||(31042908-31043032)
chr8 (360-540)||(25327664-25327844)
chr8 (237-355)||(21033519-21033637)
chr8 (241-353)||(3275955-3276068)
chr8 (238-323)||(9021553-9021638)
chr8 (237-323)||(29555232-29555318)
chr8 (238-355)||(23179974-23180091)
chr8 (237-321)||(4812935-4813019)
chr8 (372-524)||(7412787-7412939)
chr8 (237-321)||(25684295-25684379)
chr8 (238-353)||(16757661-16757776)
chr8 (237-321)||(590465-590549)
chr8 (422-578)||(10688661-10688816)
chr8 (237-321)||(28332283-28332367)
chr8 (237-353)||(28895152-28895268)
chr8 (238-321)||(28327561-28327644)
chr8 (360-417)||(25689561-25689618)
chr8 (237-353)||(16752937-16753053)
chr8 (360-417)||(10688618-10688675)
chr8 (367-577)||(35745762-35745971)
chr8 (367-417)||(5701959-5702009)
chr8 (372-417)||(4456575-4456620)
chr8 (235-283)||(43079344-43079392)
chr8 (237-283)||(18812667-18812713)
chr8 (237-283)||(43081721-43081767)
chr8 (238-283)||(18810483-18810528)
chr8 (373-417)||(23799105-23799149)
[»] scaffold0137 (1 HSPs)
scaffold0137 (360-588)||(5859-6087)
[»] chr4 (72 HSPs)
chr4 (360-585)||(8392982-8393207)
chr4 (360-585)||(8395191-8395416)
chr4 (360-588)||(7122267-7122494)
chr4 (360-578)||(5135649-5135868)
chr4 (360-578)||(5137875-5138094)
chr4 (360-577)||(24742360-24742577)
chr4 (360-552)||(7124489-7124681)
chr4 (360-563)||(31495698-31495902)
chr4 (359-585)||(51520826-51521051)
chr4 (238-358)||(47868195-47868315)
chr4 (238-353)||(6764654-6764769)
chr4 (240-353)||(2485278-2485390)
chr4 (242-358)||(8631842-8631958)
chr4 (360-585)||(56141511-56141737)
chr4 (360-557)||(13992681-13992879)
chr4 (359-581)||(28467976-28468201)
chr4 (360-577)||(9223899-9224115)
chr4 (360-577)||(9228686-9228902)
chr4 (360-577)||(5733030-5733247)
chr4 (422-579)||(29761039-29761196)
chr4 (237-353)||(4884530-4884646)
chr4 (360-544)||(18856125-18856309)
chr4 (360-544)||(3814422-3814605)
chr4 (238-353)||(8528918-8529033)
chr4 (367-544)||(45347324-45347501)
chr4 (238-323)||(16489001-16489086)
chr4 (237-353)||(18586615-18586731)
chr4 (238-323)||(40636868-40636953)
chr4 (238-353)||(16689358-16689472)
chr4 (237-323)||(15316629-15316715)
chr4 (237-323)||(31300073-31300159)
chr4 (237-322)||(15311993-15312078)
chr4 (242-323)||(15830817-15830898)
chr4 (360-484)||(31985127-31985252)
chr4 (400-540)||(18712295-18712435)
chr4 (238-321)||(11853202-11853285)
chr4 (360-435)||(18860446-18860521)
chr4 (235-312)||(4556511-4556588)
chr4 (238-353)||(25699401-25699517)
chr4 (238-290)||(26086240-26086292)
chr4 (237-312)||(7050728-7050803)
chr4 (367-465)||(5148196-5148294)
chr4 (367-420)||(8689044-8689097)
chr4 (372-417)||(29761182-29761227)
chr4 (367-419)||(5143807-5143859)
chr4 (367-417)||(16628353-16628403)
chr4 (367-417)||(38151918-38151968)
chr4 (367-416)||(3778116-3778165)
chr4 (238-313)||(16631068-16631143)
chr4 (367-418)||(5268699-5268750)
chr4 (367-417)||(6742896-6742946)
chr4 (367-417)||(10047932-10047982)
chr4 (367-417)||(16622774-16622824)
chr4 (423-544)||(45356861-45356982)
chr4 (237-286)||(3825064-3825113)
chr4 (238-286)||(7941133-7941181)
chr4 (242-286)||(37089866-37089910)
chr4 (237-284)||(38408992-38409039)
chr4 (284-349)||(4569751-4569817)
chr4 (237-283)||(16932315-16932361)
chr4 (240-286)||(51015042-51015088)
chr4 (367-417)||(54867745-54867795)
chr4 (238-283)||(9176990-9177035)
chr4 (238-283)||(16934669-16934714)
chr4 (372-417)||(36314716-36314761)
chr4 (372-417)||(36328925-36328970)
chr4 (238-286)||(11434769-11434817)
chr4 (237-277)||(22780913-22780953)
chr4 (242-286)||(24888594-24888638)
chr4 (471-503)||(48142825-48142857)
chr4 (471-503)||(52083009-52083041)
chr4 (471-503)||(52094016-52094048)
[»] scaffold0565 (1 HSPs)
scaffold0565 (359-588)||(2958-3186)
[»] chr2 (50 HSPs)
chr2 (360-588)||(12647740-12647967)
chr2 (360-577)||(9295862-9296079)
chr2 (360-577)||(14291908-14292125)
chr2 (360-577)||(11098387-11098604)
chr2 (372-557)||(25410068-25410253)
chr2 (360-563)||(6266274-6266478)
chr2 (360-562)||(32289148-32289351)
chr2 (360-557)||(3492179-3492377)
chr2 (360-557)||(4484725-4484923)
chr2 (360-557)||(30832921-30833119)
chr2 (240-353)||(5377836-5377948)
chr2 (360-577)||(39811477-39811693)
chr2 (237-323)||(20050469-20050555)
chr2 (237-323)||(30478665-30478751)
chr2 (360-581)||(40739233-40739457)
chr2 (237-321)||(22712943-22713027)
chr2 (237-353)||(22717641-22717757)
chr2 (237-323)||(27518066-27518152)
chr2 (238-323)||(12781666-12781751)
chr2 (238-323)||(20055215-20055300)
chr2 (237-313)||(17943209-17943285)
chr2 (237-322)||(2740593-2740678)
chr2 (238-323)||(35894686-35894771)
chr2 (237-353)||(38190648-38190765)
chr2 (360-437)||(44310471-44310548)
chr2 (237-321)||(2735857-2735941)
chr2 (360-436)||(32247276-32247352)
chr2 (237-321)||(39686635-39686719)
chr2 (238-353)||(33674821-33674936)
chr2 (238-321)||(39679698-39679781)
chr2 (238-353)||(45567062-45567177)
chr2 (294-358)||(45280404-45280468)
chr2 (238-321)||(17462088-17462171)
chr2 (237-353)||(37171167-37171284)
chr2 (238-284)||(45280457-45280503)
chr2 (367-417)||(8389631-8389681)
chr2 (239-284)||(17932328-17932373)
chr2 (367-419)||(36757425-36757477)
chr2 (372-419)||(28258682-28258729)
chr2 (367-417)||(10706733-10706783)
chr2 (367-417)||(21630511-21630561)
chr2 (367-417)||(33528105-33528155)
chr2 (367-417)||(39483443-39483493)
chr2 (367-411)||(20522794-20522838)
chr2 (237-284)||(27104514-27104561)
chr2 (367-417)||(23077952-23078002)
chr2 (422-524)||(28258713-28258815)
chr2 (237-286)||(19502502-19502551)
chr2 (238-283)||(45332630-45332675)
chr2 (471-503)||(2334769-2334801)
[»] scaffold0674 (1 HSPs)
scaffold0674 (360-588)||(4083-4310)
[»] scaffold0491 (2 HSPs)
scaffold0491 (360-579)||(9087-9308)
scaffold0491 (360-577)||(11534-11753)
[»] scaffold0188 (1 HSPs)
scaffold0188 (360-579)||(17431-17653)
[»] scaffold0552 (1 HSPs)
scaffold0552 (238-353)||(1234-1349)
[»] scaffold0286 (1 HSPs)
scaffold0286 (373-579)||(21953-22161)
[»] scaffold0038 (1 HSPs)
scaffold0038 (238-355)||(41906-42022)
[»] scaffold0355 (1 HSPs)
scaffold0355 (360-588)||(3337-3564)
[»] scaffold0464 (1 HSPs)
scaffold0464 (360-544)||(761-945)
[»] scaffold0135 (1 HSPs)
scaffold0135 (360-577)||(34554-34770)
[»] scaffold1764 (1 HSPs)
scaffold1764 (237-322)||(1107-1192)
[»] scaffold0140 (1 HSPs)
scaffold0140 (357-484)||(7908-8036)
[»] scaffold0256 (1 HSPs)
scaffold0256 (238-316)||(15976-16054)
[»] scaffold1519 (1 HSPs)
scaffold1519 (400-557)||(523-680)
[»] scaffold0006 (5 HSPs)
scaffold0006 (360-524)||(132752-132917)
scaffold0006 (255-321)||(224510-224576)
scaffold0006 (367-417)||(6252-6302)
scaffold0006 (367-417)||(3060-3110)
scaffold0006 (360-417)||(149601-149658)
[»] scaffold1455 (1 HSPs)
scaffold1455 (358-435)||(1707-1784)
[»] scaffold0209 (1 HSPs)
scaffold0209 (237-321)||(17413-17497)
[»] scaffold0004 (1 HSPs)
scaffold0004 (238-316)||(188675-188753)
[»] scaffold0131 (1 HSPs)
scaffold0131 (240-353)||(30795-30908)
[»] scaffold0510 (1 HSPs)
scaffold0510 (372-524)||(1096-1248)
[»] scaffold0665 (2 HSPs)
scaffold0665 (422-540)||(8112-8230)
scaffold0665 (359-417)||(8216-8274)
[»] scaffold0087 (2 HSPs)
scaffold0087 (372-524)||(43447-43599)
scaffold0087 (367-419)||(36332-36384)
[»] scaffold0259 (1 HSPs)
scaffold0259 (367-577)||(1746-1955)
[»] scaffold0028 (1 HSPs)
scaffold0028 (367-577)||(148451-148660)
[»] scaffold0197 (2 HSPs)
scaffold0197 (367-544)||(13791-13968)
scaffold0197 (367-577)||(18671-18880)
[»] scaffold0009 (1 HSPs)
scaffold0009 (367-544)||(176457-176634)
[»] scaffold0098 (1 HSPs)
scaffold0098 (360-419)||(45744-45804)
[»] scaffold0068 (1 HSPs)
scaffold0068 (237-286)||(28940-28989)
[»] scaffold0025 (2 HSPs)
scaffold0025 (237-286)||(69785-69834)
scaffold0025 (237-286)||(73496-73545)
[»] scaffold0016 (1 HSPs)
scaffold0016 (238-278)||(120569-120609)
[»] scaffold0127 (1 HSPs)
scaffold0127 (238-285)||(13007-13054)


Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-113; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 37232030 - 37231811
Alignment:
Q  18 gaatggattgttacaaacaagaaaaagcacttcactatactatgcttgttagaataagtttataacaaattcgatgaaatctggtgcatagcacctttcc 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37232030 gaatggattgttacaaacaagaaaaagctcttcactatactatgcttgttagaataagtttataacaaattcgatgaaatctggtgcatagcacctttcc 37231931  T
Q  118 tgtatatagtatgattttatatataccattgaaaatgagagaaattacagtggaatcaatagtcattttagaaccgcctttgagggaatatgaacttcgt 217  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37231930 tgtatatggtatgattttatatataccattgaaaatgagagaaattacagtggaatcaatagtcattttagaaccgcctttgagggaatatgaactccgt 37231831  T
Q  218 cccttgaggcacgcccgact 237  Q
    ||||||||||||||||||||    
T  37231830 cccttgaggcacgcccgact 37231811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 40379678 - 40379905
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  40379678 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 40379776  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40379777 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 40379876  T
Q  559 acgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||| |||||||||||| |||||||||||    
T  40379877 acgcaaatcgtgacacga-ttgggaaaatc 40379905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 16546216 - 16546443
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  16546216 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 16546314  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16546315 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16546414  T
Q  559 acgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||| |||||||||||| |||||||||||    
T  16546415 acgcaaatcgtgacacga-ttgggaaaatc 16546443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 40381889 - 40382116
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  40381889 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 40381987  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40381988 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 40382087  T
Q  559 acgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||| |||||||||||| |||||||||||    
T  40382088 acgcaaatcgtgacacga-ttgggaaaatc 40382116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 10592844 - 10593068
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  10592844 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccggg-tgccgtgagataggttgc 10592942  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||  | |    
T  10592943 agggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtggta 10593042  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    ||||||||||||||||||||||||||    
T  10593043 cgcagatcgtgacacgatttgggaaa 10593068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 16543994 - 16544221
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | ||||| |||||||||| ||     
T  16543994 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgctgtgagctagggtta 16544092  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16544093 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16544192  T
Q  559 acgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||| |||||||||||| |||||||||||    
T  16544193 acgcaaatcgtgacacga-ttgggaaaatc 16544221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 22536852 - 22536633
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22536852 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 22536753  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| ||||| ||| |||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  22536752 agggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 22536653  T
Q  560 cgcagatcgtgacacgattt 579  Q
    | ||||||||||||||||||    
T  22536652 cacagatcgtgacacgattt 22536633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 25077706 - 25077933
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||||||||||||||| |||    
T  25077706 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattg-gaggtgccgtgagctagggttg 25077804  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
     |||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25077805 taggggtgcaaat-cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25077903  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  25077904 gacgcaaatcgtgacacga-ttgggaaaatc 25077933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 25135675 - 25135902
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  | |||||||||||||||| |||    
T  25135675 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattg-gaggtgccgtgagctagggttg 25135773  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
     |||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25135774 taggggtgcaaat-cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25135872  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  25135873 gacgcaaatcgtgacacga-ttgggaaaatc 25135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 359 - 579
Target Start/End: Original strand, 29719964 - 29720188
Alignment:
Q  359 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 457  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||  |    
T  29719964 gtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct 29720063  T
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | |||||||||    
T  29720064 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggac 29720163  T
Q  557 ggacgca--gatcgtgacacgattt 579  Q
    ||| |||   |||||||||||||||    
T  29720164 ggatgcaccaatcgtgacacgattt 29720188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 238 - 358
Target Start/End: Original strand, 1240078 - 1240198
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240078 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 1240177  T
Q  338 aaaatcgtgccacgattggat 358  Q
    |||||||||||||||||||||    
T  1240178 aaaatcgtgccacgattggat 1240198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 373 - 577
Target Start/End: Complemental strand, 24136470 - 24136266
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 472  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||| |||||| | ||||||||||||| ||||||||||| || ||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttgcagggtgccaaatc 24136371  T
Q  473 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgac 572  Q
    |||||||||| | || |||||||||||||||  | ||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||| ||||||||    
T  24136370 gtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtgac 24136271  T
Q  573 acgat 577  Q
    |||||    
T  24136270 acgat 24136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 6747043 - 6747164
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6747043 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 6747142  T
Q  337 aaaaatcgtgccacgattggat 358  Q
    |||| |||||||||||||||||    
T  6747143 aaaagtcgtgccacgattggat 6747164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 360 - 585
Target Start/End: Complemental strand, 27450409 - 27450185
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  27450409 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27450310  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | ||    
T  27450309 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 27450211  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    |||| |||||||||||||||||||||    
T  27450210 cgcaaatcgtgacacgatttgggaaa 27450185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 360 - 585
Target Start/End: Complemental strand, 27445566 - 27445342
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  27445566 tgttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27445467  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | ||    
T  27445466 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 27445368  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    |||| |||||||||||||||||||||    
T  27445367 cgcaaatcgtgacacgatttgggaaa 27445342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 238 - 358
Target Start/End: Original strand, 6744801 - 6744921
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6744801 tgtgagagttaatttaaaatcagaattctggagaatcgtgccacgatggagaaacttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 6744900  T
Q  338 aaaatcgtgccacgattggat 358  Q
    |||||||||||||||||||||    
T  6744901 aaaatcgtgccacgattggat 6744921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 360 - 563
Target Start/End: Complemental strand, 9789809 - 9789605
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | |||||||||||||||| |||| ||||     
T  9789709 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtttcttgcgacga 9789610  T
Q  559 acgca 563  Q
    |||||    
T  9789609 acgca 9789605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 360 - 563
Target Start/End: Complemental strand, 18442233 - 18442029
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | ||||||||||| | |||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | |||||||||||||||| |||||||||     
T  18442133 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacga 18442034  T
Q  559 acgca 563  Q
    |||||    
T  18442033 acgca 18442029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 360 - 563
Target Start/End: Original strand, 26177466 - 26177670
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || ||||||||||||   || |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| |||||||||||    
T  26177566 cagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgg 26177665  T
Q  559 acgca 563  Q
    |||||    
T  26177666 acgca 26177670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 358 - 585
Target Start/End: Complemental strand, 43599320 - 43599093
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggt 456  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||  ||| |||||||||||| |    
T  43599320 tgtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtt 43599221  T
Q  457 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| |    
T  43599220 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 43599122  T
Q  557 ggacgcagatcgtgacacgatttgggaaa 585  Q
     |||||| |||||||||||||||||||||    
T  43599121 agacgcaaatcgtgacacgatttgggaaa 43599093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 358 - 585
Target Start/End: Complemental strand, 43604812 - 43604585
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggt 456  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||  ||| |||||||||||| |    
T  43604812 tgtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtt 43604713  T
Q  457 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| |    
T  43604712 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 43604614  T
Q  557 ggacgcagatcgtgacacgatttgggaaa 585  Q
     |||||| |||||||||||||||||||||    
T  43604613 agacgcaaatcgtgacacgatttgggaaa 43604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 358 - 585
Target Start/End: Complemental strand, 43610304 - 43610077
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggt 456  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||  ||| |||||||||||| |    
T  43610304 tgtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtt 43610205  T
Q  457 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| |    
T  43610204 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 43610106  T
Q  557 ggacgcagatcgtgacacgatttgggaaa 585  Q
     |||||| |||||||||||||||||||||    
T  43610105 agacgcaaatcgtgacacgatttgggaaa 43610077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 10529638 - 10529522
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10529638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatcgagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgga 10529539  T
Q  338 aaaatcgtgccacgatt 354  Q
    |||||||||||||||||    
T  10529538 aaaatcgtgccacgatt 10529522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 360 - 544
Target Start/End: Complemental strand, 30631948 - 30631764
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||    
T  30631948 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 30631849  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||  || || |||||||||||||| || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||    
T  30631848 aggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 30631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 4409796 - 4409917
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4409796 ttgtgaaagttaacttaaaatcagagttctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 4409895  T
Q  337 aaaaatcgtgccacgattggat 358  Q
    |||||||||||||| |||||||    
T  4409896 aaaaatcgtgccacaattggat 4409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 360 - 538
Target Start/End: Original strand, 29722152 - 29722332
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||  ||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctg 29722251  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataagga 538  Q
    || ||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | |||||||    
T  29722252 catggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 372 - 563
Target Start/End: Original strand, 26170370 - 26170561
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | ||||||||||| || |    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaat 26170469  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgca 563  Q
    |||||||||||   || |||||||||||  ||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||    
T  26170470 cgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgca 26170561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 575
Target Start/End: Original strand, 1456638 - 1456852
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| || |    
T  1456638 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttac 1456737  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||| | ||||||||| ||| | ||||||| | ||    
T  1456738 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttgggtcaga 1456836  T
Q  560 cgcagatcgtgacacg 575  Q
     ||| |||||||||||    
T  1456837 tgcaaatcgtgacacg 1456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 29752390 - 29752266
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  459 cagggtgcaaattcgtgacacgatt 483  Q
    |||||||| || ||||| |||||||    
T  29752290 cagggtgccaaatcgtggcacgatt 29752266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 37223063 - 37222912
Alignment:
Q  54 atactatgcttgttagaataagtttataacaaattcgatgaaatctggtgcatagcacctttcctgtatatagtatgattttatatataccattgaaaat 153  Q
    ||||||||||||||||||| |||||| ||||||||  ||||| |||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||| |    
T  37223063 atactatgcttgttagaatgagtttaaaacaaatttaatgaattctggtacatagcacctttcctgtatatggtatgattttatacatacaattgaaagt 37222964  T
Q  154 gagagaaattacagtggaatcaatagtcattttagaaccgcctttgagggaat 206  Q
    |||||||||||| | |||||||||||| ||||||||||| ||| |||||||||    
T  37222963 gagagaaattac-gaggaatcaatagtaattttagaaccacctctgagggaat 37222912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 40222413 - 40222529
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||| |||| ||    
T  40222413 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattctgaagcagtcacagg 40222512  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  40222513 aaaaatcgtgccacgat 40222529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 360 - 562
Target Start/End: Original strand, 16407641 - 16407844
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||| | | ||||||||||| | |||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | |||||||| |||||| ||||||||||     
T  16407741 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttgggacgt 16407840  T
Q  559 acgc 562  Q
    ||||    
T  16407841 acgc 16407844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 39854226 - 39854337
Alignment:
Q  240 tgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 339  Q
    |||||||||||||||||| ||||||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39854226 tgagagttaacttaaaattagaattctggagaatcgtgtcatgatagagaagtttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 39854325  T
Q  340 aatcgtgccacg 351  Q
    ||||||| ||||    
T  39854326 aatcgtgtcacg 39854337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 42237954 - 42238069
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || |||| ||||||||    
T  42237954 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattttgaagcagtcactgga 42238053  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||||||||||||||    
T  42238054 aaaatcgtgccacgat 42238069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 581
Target Start/End: Complemental strand, 29751724 - 29751523
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||  |||||||||||| |||||||||||||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||||                     |||||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  29751624 cagggtgccaaatcgtgacacgatt---------------------gtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 29751546  T
Q  559 acgcagatcgtgacacgatttgg 581  Q
    ||||| |||||||||||||||||    
T  29751545 acgcaaatcgtgacacgatttgg 29751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 527
Target Start/End: Original strand, 29402550 - 29402717
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||  |  ||| |||||||| ||||    
T  29402550 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgc 29402649  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatc 527  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||    
T  29402650 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 29402717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 544
Target Start/End: Complemental strand, 15045279 - 15045096
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||||||| || ||||    
T  15045279 tgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgc 15045181  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||| |||||||||  | |||||||||||||    
T  15045180 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtc 15045096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 360 - 562
Target Start/End: Original strand, 16409077 - 16409280
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | || |||||||| | |||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    || ||||| || | |||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| | ||||||||     
T  16409177 caaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattgggacgt 16409276  T
Q  559 acgc 562  Q
    ||||    
T  16409277 acgc 16409280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 484
Target Start/End: Complemental strand, 15465125 - 15465000
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | |||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  459 cagggtgcaaattcgtgacacgattt 484  Q
    |||||||| || ||||||||||||||    
T  15465025 cagggtgccaaatcgtgacacgattt 15465000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 585
Target Start/End: Complemental strand, 43592811 - 43592648
Alignment:
Q  422 atcgtgacacgatttcg-gggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 520  Q
    ||||||||||||||||  ||| |||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||    
T  43592811 atcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 43592712  T
Q  521 aagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaa 585  Q
    |||||||| | ||||||||||||| | ||||||| | |||||| |||||||||||||||||||||    
T  43592711 aagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgacacgatttgggaaa 43592648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 28807083 - 28807292
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 465  Q
    |||| |||||||||| |||||||||||||||| | ||||||| ||||||||||  ||||||||||||| | | | |||||||||| | ||| ||||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatct-gagatgccgtgagccaagtttgcagggtg 28807181  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 565  Q
    |||| ||||| |||||| | || ||||||||||||||||  |||||||| | ||||||||||  | |||||||||||||   ||| ||||| |  |||||    
T  28807182 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc-aacctggggaccgttgcaga 28807280  T
Q  566 tcgtgacacgat 577  Q
    ||||||||||||    
T  28807281 tcgtgacacgat 28807292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 37217055 - 37216936
Alignment:
Q  54 atactatgcttgttagaataagtttataacaaattcgatgaaatctggtgcatagcacctttcctgtatatagtatgattttatatataccattgaaaat 153  Q
    ||||||||||||||||||| |||||| ||||||||  ||||| |||||| |||||||||||||||| || | | ||||||||| |||||||||| ||||     
T  37217055 atactatgcttgttagaatgagtttaaaacaaatttaatgaattctggttcatagcacctttcctgcatttggaatgattttaaatataccattcaaaaa 37216956  T
Q  154 gagagaaattacagtggaat 173  Q
    || |||||||||||||||||    
T  37216955 gaaagaaattacagtggaat 37216936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 2298528 - 2298443
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||    
T  2298528 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgactgttgaagcaagattctg 2298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 22672503 - 22672619
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | | ||||| ||||||||||||| ||||||  | | | |||||    
T  22672503 ttgtgagagttaacttaaaattagaattctggagaatcgtgccacgatggaaaagcattgcgccacaattgttgaagcaagattctgagggagttactgg 22672602  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||  ||||||||||||    
T  22672603 aaatttcgtgccacgat 22672619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 35385963 - 35385879
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  35385963 ttgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 35385879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 372 - 484
Target Start/End: Original strand, 36931856 - 36931968
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||| | | || |||||||| | ||||||||||| || |    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttgcagggtgccaaat 36931955  T
Q  472 cgtgacacgattt 484  Q
    |||||||||||||    
T  36931956 cgtgacacgattt 36931968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 358 - 524
Target Start/End: Original strand, 9352805 - 9352972
Alignment:
Q  358 tgtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggt 456  Q
    |||||||||||| | ||||||||||||||| || |||||||| ||||||||||| ||||| ||| ||||||||||||||| |   ||||||||||| | |    
T  9352805 tgtgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtt 9352904  T
Q  457 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||||||||  || ||||| |||||||  |  |||||||||||||||  | ||||||||| |||||||    
T  9352905 tgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 25452145 - 25452229
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||    
T  25452145 ttgtgagagttaacttaaaattagaaatatggagaatcgtgccacgatggagaagcatcgcgccacgattgatgaagcaagattc 25452229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 25445219 - 25445302
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||| ||||    
T  25445219 tgtgagagttaacttaaaattagaaatctggagaatcgtaccatgatggagaagcatcgcgccacgattgatgaagcaagattc 25445302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 543
Target Start/End: Original strand, 37556137 - 37556308
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg--ttgcagggtgcaaa 469  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||| | | | |||||||||| | |  |||  ||  |||||    
T  37556137 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatct-gagatgccgtgagccaagttttgatggaggcaaa 37556235  T
Q  470 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggt 543  Q
     ||||| |||||| | || |||| |||||||||||  |||||||||| ||||||||||  | ||||||||||||    
T  37556236 -tcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 543
Target Start/End: Original strand, 37560959 - 37561130
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg--ttgcagggtgcaaa 469  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    ||||||||||||| | | | |||||||||| | |  |||  ||  |||||    
T  37560959 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatct-gagatgccgtgagccaagttttgatggaggcaaa 37561057  T
Q  470 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggt 543  Q
     ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | ||||||||||||    
T  37561058 -tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 581
Target Start/End: Complemental strand, 38219947 - 38219806
Alignment:
Q  442 tgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactg 541  Q
    ||||||||||| | ||| ||||||| || |||||||||||| | || |||| ||||||||||  | ||||||||| ||||||| ||| | ||||||||||    
T  38219947 tgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactg 38219848  T
Q  542 gtcgttccttgggacggacg--cagatcgtgacacgatttgg 581  Q
    ||||| ||||| |||| |||  |  |||||||||||||||||    
T  38219847 gtcgtaccttgtgacgtacgttccaatcgtgacacgatttgg 38219806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 1170470 - 1170547
Alignment:
Q  244 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||| || | |||||||| ||||    
T  1170470 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacaatggctgaagcaagattc 1170547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 31180830 - 31180773
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31180830 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 33768764 - 33768555
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33768764 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33768667  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33768666 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33768568  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  33768567 atcgtgacacgat 33768555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 33791896 - 33791687
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33791896 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33791799  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33791798 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33791700  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  33791699 atcgtgacacgat 33791687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 43592854 - 43592797
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43592854 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 544
Target Start/End: Complemental strand, 2785955 - 2785778
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  2785955 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 2785858  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  2785857 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 2785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 585
Target Start/End: Complemental strand, 31180787 - 31180624
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||  |||| |||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   || |||| |||||||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgtta 31180688  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat-ttgggaaa 585  Q
    ||||||  | |||||||||||||   ||||||| | |||||| ||||||||| ||| ||||||||    
T  31180687 agtatcactgataaggactggtc-aaccttgggtcagacgcaaatcgtgacatgatcttgggaaa 31180624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 577
Target Start/End: Complemental strand, 35388169 - 35388079
Alignment:
Q  489 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtgacacgat 577  Q
    |||| ||||||||||  | ||||||||||||||||||||||| ||||||||||||| | |||||||||| |||  || |||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgat 35388079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 14520846 - 14520796
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14520846 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 353
Target Start/End: Complemental strand, 17841816 - 17841706
Alignment:
Q  243 gagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactggaaaaa 341  Q
    ||||||| |||||||||| | ||||||||| |||| ||||||||||||||  | || |||||||||| || ||| || ||| ||||| ||| |||||||     
T  17841816 gagttaatttaaaatcaggaatctggagaaacgtgtcacgatggagaagcaacatgtcacgattgtt-aaacaagatcctgaagcaagtcattggaaaat 17841718  T
Q  342 tcgtgccacgat 353  Q
    ||||||||||||    
T  17841717 tcgtgccacgat 17841706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 31179934 - 31179883
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggag 288  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||    
T  31179934 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggag 31179883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 409  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 21684970 - 21684921
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  21684970 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 21684921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 34479973 - 34479924
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  34479973 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 34479924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 2174680 - 2174728
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  2174680 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 2174728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 25921992 - 25921944
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  25921992 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 25921944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 31396497 - 31396564
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 434  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  31396497 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 31396564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 403
Target Start/End: Complemental strand, 43625648 - 43625605
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaa 403  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||    
T  43625648 tgttgatattggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 12083658 - 12083708
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||| |||||| |||| ||||||||||| ||||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 11916457 - 11916502
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  11916457 cttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 34477633 - 34477584
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||   ||||| ||||||||| ||||||||    
T  34477633 ttgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatgg 34477584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 4236374 - 4236418
Alignment:
Q  242 agagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  4236374 agagttaacttaaaatcagatttctgcagaattgtggcacgatgg 4236418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 39797849 - 39797897
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| | ||||||| ||||||||    
T  39797849 tgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatgg 39797897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-107; HSPs: 78)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 360 - 585
Target Start/End: Complemental strand, 16579101 - 16578876
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579101 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 16579002  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16579001 agggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16578902  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    ||||||||||||||||||||||||||    
T  16578901 cgcagatcgtgacacgatttgggaaa 16578876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 16616279 - 16616504
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616279 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 16616378  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16616379 agggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16616478  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    ||||||||||||||||||||||||||    
T  16616479 cgcagatcgtgacacgatttgggaaa 16616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 16554454 - 16554679
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  16554454 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16554553  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16554554 agggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16554653  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    ||||||||||||||||||||||||||    
T  16554654 cgcagatcgtgacacgatttgggaaa 16554679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 16631010 - 16631235
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  16631010 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16631109  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  16631110 agggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 16631209  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
    ||||||||||||||||||||||||||    
T  16631210 cgcagatcgtgacacgatttgggaaa 16631235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 359 - 588
Target Start/End: Original strand, 25420796 - 25421024
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||  |||||||||||||| ||    
T  25420796 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcgga-tgccgtgagctagggtt 25420894  T
Q  458 gcaggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25420895 gcaggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 25420993  T
Q  557 ggacgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||||| ||||||||| || |||||||||||    
T  25420994 ggacgcaaatcgtgacatga-ttgggaaaatc 25421024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 368 - 578
Target Start/End: Original strand, 27647476 - 27647686
Alignment:
Q  368 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgca 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgca 27647575  T
Q  468 aattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatc 567  Q
    || ||||| |||||||  |  |||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||||||  | |||||||||    
T  27647576 aaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtcgtttcttgggtggtacgcagatc 27647675  T
Q  568 gtgacacgatt 578  Q
    |||||||||||    
T  27647676 gtgacacgatt 27647686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 34166666 - 34166885
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  34166666 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 34166764  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34166765 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 34166863  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    | ||||| ||||||||||||||    
T  34166864 gtacgcaaatcgtgacacgatt 34166885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 368 - 578
Target Start/End: Original strand, 13150857 - 13151068
Alignment:
Q  368 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttgcaggg-tg 465  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||||||| ||    
T  13150857 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttgcaggggtg 13150955  T
Q  466 caaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  13150956 caaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 13151054  T
Q  565 atcgtgacacgatt 578  Q
    ||||||||||||||    
T  13151055 atcgtgacacgatt 13151068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 6026834 - 6027061
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  || || |||||||||||||| ||||| | |||||||| |||    
T  6026834 tgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtgc-gagagctagggttg 6026932  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  6026933 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacg 6027031  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  6027032 gacgcaaatcgtgacacga-ttgggaaaatc 6027061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 6136547 - 6136320
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||| |||    
T  6136547 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcgga-tgccgtgagctagggttg 6136449  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||   ||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6136448 caggggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 6136349  T
Q  559 acgcagatcgtgacacgatttgggaaaatc 588  Q
    | ||| |||||||||| | |||||||||||    
T  6136348 aagcaaatcgtgacac-aattgggaaaatc 6136320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 360 - 578
Target Start/End: Complemental strand, 33342688 - 33342469
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||| |||||||||  |||||||||||||| |||    
T  33342688 tgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcgga-tgccgtgagctagggttg 33342590  T
Q  459 caggg-tgcaaattcgtgacacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| ||||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33342589 caggggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 33342491  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  33342490 ggacgcaaatcgtgacacgatt 33342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 34164444 - 34164663
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| |||||||||  ||||||||| |||| |||    
T  34164444 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcgga-tgccgtgagttagggttg 34164542  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34164543 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 34164641  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  34164642 ggacgcaaatcgtgacacgatt 34164663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 422 - 585
Target Start/End: Original strand, 16652759 - 16652922
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtta 16652858  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaa 585  Q
    ||||||||| |||||||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  16652859 agtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgatttgggaaa 16652922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 26084724 - 26084842
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26084724 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 26084823  T
Q  337 aaaaatcgtgccacgattg 355  Q
    |||||||||||||||||||    
T  26084824 aaaaatcgtgccacgattg 26084842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 360 - 559
Target Start/End: Original strand, 411685 - 411886
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||| |||||| |||||||||||||||  ||    
T  411685 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtctg 411784  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | ||||||||||    
T  411785 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacg 411884  T
Q  558 ga 559  Q
    ||    
T  411885 ga 411886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 5674242 - 5674447
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||| ||||| | | ||||||||||| | ||||||||||| || |    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaat 5674341  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtga 571  Q
    |||||||| || | || |||||||||||||||  ||||||||||||||||||||||| | ||||||||||||| | |||||||||| ||||| |||||||    
T  5674342 cgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtga 5674441  T
Q  572 cacgat 577  Q
    ||||||    
T  5674442 cacgat 5674447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 1230768 - 1230652
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1230768 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgg 1230669  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||| ||||||||||    
T  1230668 aaaaattgtgccacgat 1230652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 360 - 527
Target Start/End: Original strand, 30125018 - 30125185
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  30125018 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 30125117  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatc 527  Q
    |||  || || ||||| |||||||| || |||||||||||||||   |||||||||||||||||||||    
T  30125118 aggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 26064755 - 26064873
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  26064755 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcacttt 26064854  T
Q  337 aaaaatcgtgccacgattg 355  Q
    |||| ||||| ||||||||    
T  26064855 aaaattcgtgtcacgattg 26064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 242 - 358
Target Start/End: Complemental strand, 22343331 - 22343215
Alignment:
Q  242 agagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaa 341  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  22343331 agagttaacttaaaatcagaattctggagaatcaagccacgatggagaagcttcgtgccacgattgttgaagcaaaactctggagcattcattggaaaaa 22343232  T
Q  342 tcgtgccacgattggat 358  Q
    |||||||||||||||||    
T  22343231 tcgtgccacgattggat 22343215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 373 - 579
Target Start/End: Complemental strand, 2172090 - 2171882
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 472  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || ||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatc 2171991  T
Q  473 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtg 570  Q
    |||||||||| | || ||||||||||||||| || ||||||||||||||||| |||   |||||||| |||||| ||||| |||| |||  |  ||||||    
T  2171990 gtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttgtgacgtacgtaccaatcgtg 2171891  T
Q  571 acacgattt 579  Q
    |||||||||    
T  2171890 acacgattt 2171882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 357 - 557
Target Start/End: Complemental strand, 22709648 - 22709447
Alignment:
Q  357 atgtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg 455  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||| ||||| | ||||||||||||| | | |||| |||||| |     
T  22709648 atgtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggt 22709549  T
Q  456 ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 555  Q
    ||||||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||    
T  22709548 ttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtga 22709449  T
Q  556 cg 557  Q
    ||    
T  22709448 cg 22709447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 355
Target Start/End: Complemental strand, 28241860 - 28241744
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||    
T  28241860 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaaagttctgg-gcaaacactgga 28241762  T
Q  338 aaaatcgtgccacgattg 355  Q
    ||||||||||||||||||    
T  28241761 aaaatcgtgccacgattg 28241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 360 - 555
Target Start/End: Complemental strand, 3073343 - 3073147
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | ||||||||||| |  |     
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtcta 3073244  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 555  Q
    |||||||| || |||||||||||||   | |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||| | ||||||||    
T  3073243 cagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 3073147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 360 - 585
Target Start/End: Complemental strand, 11857567 - 11857343
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| ||||    
T  11857567 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 11857468  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||||||| |  | ||||||||| |||   ||||||| | |     
T  11857467 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtc-aaccttgggtccgt 11857369  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
     ||| |||||||||||||||||||||    
T  11857368 tgcaaatcgtgacacgatttgggaaa 11857343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 14741926 - 14742142
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  | |||||||||| ||||    
T  14741926 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgc 14742025  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||  | ||||||||| |||   ||||||| | |     
T  14742026 aggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-aaccttgggtccgt 14742124  T
Q  560 cgcagatcgtgacacgat 577  Q
     |||||||||||||||||    
T  14742125 tgcagatcgtgacacgat 14742142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 22352387 - 22352266
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||  |||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  22352387 ttgtgagagttaacttaaaatctaaattctagagaatcgtgctacaatggagaagcttcgtgccacgattgttgaatcaaaattctggagcattcactgg 22352288  T
Q  337 aaaaatcgtgccacgattggat 358  Q
    |||||| |||||||||||||||    
T  22352287 aaaaattgtgccacgattggat 22352266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 483 - 588
Target Start/End: Original strand, 25421014 - 25421118
Alignment:
Q  483 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttggg 582  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  25421014 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatga-ttggg 25421112  T
Q  583 aaaatc 588  Q
    ||||||    
T  25421113 aaaatc 25421118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 22010189 - 22010405
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  ||||| || ||| ||||    
T  22010189 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgc 22010288  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  22010289 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 22010387  T
Q  560 cgcagatcgtgacacgat 577  Q
     ||| |||||||||||||    
T  22010388 tgcaaatcgtgacacgat 22010405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 360 - 485
Target Start/End: Complemental strand, 6097986 - 6097860
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 6097887  T
Q  459 cagggtgcaaattcgtgacacgatttg 485  Q
    |||||||| || |||||||||||||||    
T  6097886 cagggtgctaaatcgtgacacgatttg 6097860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 422 - 578
Target Start/End: Complemental strand, 5266610 - 5266454
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||| |||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 5266511  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatt 578  Q
    ||||||||| ||||||||||||| | |||||  ||||||||| ||||||||||||||    
T  5266510 agtatccttgataaggactggtcataccttgaaacggacgcaaatcgtgacacgatt 5266454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 17695383 - 17695297
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  17695383 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 17695297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 544
Target Start/End: Complemental strand, 6439083 - 6438899
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| |||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  6439083 tgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 6438985  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    | || |||| | ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  6438984 ctggatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 6438899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 26887754 - 26887639
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | |||  |||||||    
T  26887754 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgga 26887655  T
Q  338 aaaatcgtgccacgat 353  Q
    ||  ||||||||||||    
T  26887654 aatttcgtgccacgat 26887639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 484
Target Start/End: Original strand, 26253589 - 26253714
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||| ||||| | | | ||||||| ||| | |    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttag 26253688  T
Q  459 cagggtgcaaattcgtgacacgattt 484  Q
    |||||||| || ||||||||||||||    
T  26253689 cagggtgccaaatcgtgacacgattt 26253714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 13878379 - 13878495
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| |||||||| |||||||||| ||||  | | |   |||||    
T  13878379 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccatgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgg 13878478  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  13878479 aaaaatcgtgccacgat 13878495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 13883127 - 13883211
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  13883127 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 13883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 25466431 - 25466347
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct 322  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  25466431 tgtgagagttaacttaaaatcagaaatctagagaatcatgccacgatggagaagcatcgtgccacaattgttgaagcaagattct 25466347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 31249244 - 31249160
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  31249244 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 31249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 35201856 - 35201772
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  35201856 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 35201772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 26642829 - 26642944
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||   ||||| |||||||||||| ||| |||||| |||| ||||||||    
T  26642829 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactgga 26642928  T
Q  338 aaaatcgtgccacgat 353  Q
    ||  |||||| |||||    
T  26642929 aacttcgtgcaacgat 26642944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 26748795 - 26748910
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||   ||||| |||||||||||| ||| |||||| |||| ||||||||    
T  26748795 tgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagcagtcactgga 26748894  T
Q  338 aaaatcgtgccacgat 353  Q
    ||  |||||| |||||    
T  26748895 aacttcgtgcaacgat 26748910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 30975228 - 30975145
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  30975228 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 30975145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 30981667 - 30981584
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  30981667 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 30981584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 30987831 - 30987748
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  30987831 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 30987748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 34151828 - 34151931
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 458  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||||| || |||||    
T  34151828 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc-ggatgccgtgagttagggttg 34151926  T
Q  459 caggg 463  Q
    |||||    
T  34151927 caggg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 35209091 - 35209007
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| ||| |||||||| |||||||||| ||||    
T  35209091 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacaatggagaagcatcgcgccacgatggttgaagcaagattc 35209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 16785572 - 16785687
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| || |||| ||| |||||||| |||||||||| ||||  | | |  |||||||    
T  16785572 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatcgaaaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgga 16785671  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||| ||||||||||    
T  16785672 aaaattgtgccacgat 16785687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 25941330 - 25941400
Alignment:
Q  251 ttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  25941330 ttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 25941400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 16652716 - 16652773
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16652716 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 13468036 - 13467920
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | | ||||||| | | |||||||||||||||  |||||||||||||||||||||| || | | ||||| ||||| |    
T  13468036 tgtgagagttaacttaaaatcaggaatttggagaaacataccacgatggagaagcaacgtgccacgattgttgaagcaagatccagaagcaagtcactag 13467937  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||| ||||||||||||    
T  13467936 aaaattcgtgccacgat 13467920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 16839323 - 16839114
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  16839323 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 16839226  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||||||||| |  ||||    
T  16839225 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttgggaccgttgcag 16839127  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  16839126 atcgtgacacgat 16839114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 524
Target Start/End: Complemental strand, 23896944 - 23896792
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| || ||||||||  |||||||||||||||||||| ||||||||||||||| |   |  |||||| | | ||||||||||  || |    
T  23896944 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaat 23896845  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||||  ||||||| |  |||||||||||||||  | ||||||||| |||||||    
T  23896844 cgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 422 - 577
Target Start/End: Original strand, 14737128 - 14737282
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||  |  |||||||||||| |||||||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 14737227  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat 577  Q
    ||||||  | ||||||||| |||   ||||||| | |  |||||||||||||||||    
T  14737228 agtatcactgataaggacttgtc-aaccttgggtccgttgcagatcgtgacacgat 14737282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 5266654 - 5266596
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5266654 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 14737084 - 14737142
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14737084 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 456 - 577
Target Start/End: Original strand, 28155167 - 28155287
Alignment:
Q  456 ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggga 555  Q
    |||||||||||||| ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | |||||||||||||   ||| ||||    
T  28155167 ttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc-aacctgggga 28155265  T
Q  556 cggacgcagatcgtgacacgat 577  Q
    | |  |||||||||||||||||    
T  28155266 ccgttgcagatcgtgacacgat 28155287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 33329940 - 33330149
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  ||||||||||||  |||| | ||||||||| | || |||| ||      
T  33329940 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacga--tcggagatgccgtgagccaagtttgctggaa 33330037  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33330038 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33330136  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  33330137 atcgtgacacgat 33330149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 33215498 - 33215545
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  33215498 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgat 33215545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 33215534 - 33215593
Alignment:
Q  294 tcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgat 353  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||    
T  33215534 tcgtgccacgattgttgaagaaagattctgaagcagtcactggaaaaatcgtgccacgat 33215593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 33335437 - 33335646
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||  | |||||| |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33335437 attggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33335534  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  33335535 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 33335633  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  33335634 atcgtgacacgat 33335646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 6005999 - 6005790
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||| ||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||| ||||| | ||| || ||      
T  6005999 attggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccatgagccaagtttgctggaa 6005902  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  6005901 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcag 6005803  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  6005802 atcgtgacacgat 6005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 579
Target Start/End: Complemental strand, 6097877 - 6097785
Alignment:
Q  489 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgca--gatcgtgacacgattt 579  Q
    |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||| |||||| |||||   |||||||||||||||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattt 6097785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 15533221 - 15533145
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggag-aatcgtgccacgatggagaagcttcgtgccacgattgttgaag 313  Q
    |||||||||||||||||||||||| | |||  || ||||||||||||||||||||||  ||||||||||| |||||||    
T  15533221 ttgtgagagttaacttaaaatcagga-tctacagaaatcgtgccacgatggagaagcaacgtgccacgatggttgaag 15533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 14507716 - 14507668
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  14507716 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 14507668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 415
Target Start/End: Original strand, 28155097 - 28155145
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 415  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155097 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 544
Target Start/End: Complemental strand, 5343959 - 5343880
Alignment:
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  5343959 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 5343880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 5344057 - 5343990
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 434  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||| |||||||| |  |||||||||||||    
T  5344057 attggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 5016976 - 5017026
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  5016976 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 31085953 - 31086003
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  31085953 attggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 15541679 - 15541625
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggag-aatcgtgccacgatggagaagc 292  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||||||||    
T  15541679 tgtgagagttaacttaaaatcaggatt-tgcagaaatcgtgccacgatggagaagc 15541625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 417
Target Start/End: Original strand, 5571748 - 5571806
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||  ||||||||||||||||| | ||| |||| || ||||||||||||||||||    
T  5571748 gtgttgaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 26066612 - 26066566
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  26066612 ttgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacga 26066566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 33308684 - 33308730
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  33308684 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 33308730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 33310953 - 33310999
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  33310953 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 33310999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 524
Target Start/End: Original strand, 5756983 - 5757116
Alignment:
Q  391 aagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaa 490  Q
    ||||| || ||||| ||||||||||| ||| |||||||||| |||| |   || |||||| | | ||||||||||  || |||||  ||||||| |  ||    
T  5756983 aagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaa 5757082  T
Q  491 atcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||||||||||||  | ||||||||| |||||||    
T  5757083 atcgtgacacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 412  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 26068882 - 26068837
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  26068882 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 26068837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 3e-96; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 355 - 588
Target Start/End: Complemental strand, 18392785 - 18392553
Alignment:
Q  355 ggatgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctag 454  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||  | |||||||||||||||    
T  18392785 ggatctgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattg-gaggtgccgtgagctag 18392687  T
Q  455 g-ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgg 553  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18392686 ggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgg 18392587  T
Q  554 gacggacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||||||| |||||||||||| |||||||||||    
T  18392586 gacggacgcaaatcgtgacacga-ttgggaaaatc 18392553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 360 - 578
Target Start/End: Complemental strand, 32060888 - 32060670
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  32060888 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgga-tgccgtgagctagggttg 32060790  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32060789 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 32060691  T
Q  558 gacgcagatcgtgacacgatt 578  Q
    |||||| ||||||||||||||    
T  32060690 gacgcaaatcgtgacacgatt 32060670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 6592921 - 6592694
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  6592921 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcgga-tgccgtgagctagggttg 6592823  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6592822 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6592724  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  6592723 gacgcaaatcgtgacacga-ttgggaaaatc 6592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 20343500 - 20343719
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  20343500 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 20343599  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
     || |||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  20343600 cggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 20343699  T
Q  560 cgcagatcgtgacacgattt 579  Q
    ||||||||||||||||||||    
T  20343700 cgcagatcgtgacacgattt 20343719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 6595137 - 6594910
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  6595137 tgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcgga-tgccgtgagctagggttg 6595039  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6595038 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6594940  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  6594939 gacgcaaatcgtgacacga-ttgggaaaatc 6594910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 359 - 581
Target Start/End: Original strand, 24789425 - 24789648
Alignment:
Q  359 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 457  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||    
T  24789425 gtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagttt 24789524  T
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||| || ||||| |||||| | || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||  |    
T  24789525 gcagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttg 24789624  T
Q  558 gacgcagatcgtgacacgatttgg 581  Q
     ||||| ||| |||||||||||||    
T  24789625 tacgcaaatcttgacacgatttgg 24789648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 1562587 - 1562360
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |  |    | | ||      
T  1562587 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtgtttctttttttttgttttt 1562488  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
     ||||   || ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  1562487 tgggttttaaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacgga 1562388  T
Q  560 cgcagatcgtgacacgatttgggaaaatc 588  Q
    |||| |||||||||||| |||||||||||    
T  1562387 cgcaaatcgtgacacga-ttgggaaaatc 1562360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 360 - 578
Target Start/End: Complemental strand, 21640423 - 21640205
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  21640423 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 21640324  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||||||| |||||||||  | ||||||||||||| | |||||| |||||    
T  21640323 aggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacgga 21640224  T
Q  560 cgcagatcgtgacacgatt 578  Q
    |||| ||||||||||||||    
T  21640223 cgcaaatcgtgacacgatt 21640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 359 - 577
Target Start/End: Complemental strand, 2058605 - 2058388
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| |||    
T  2058605 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagctagtttg 2058507  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  2058506 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 2058407  T
Q  559 acgcagatcgtgacacgat 577  Q
    ||||| |||||||||||||    
T  2058406 acgcaaatcgtgacacgat 2058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 18389246 - 18389117
Alignment:
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18389147  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  18389146 gacgcaaatcgtgacacga-ttgggaaaatc 18389117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 359 - 578
Target Start/End: Original strand, 20357027 - 20357246
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||    
T  20357027 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttg 20357126  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || ||||| |||||| | || ||||||||||| |||   |||||||||||||||||||||||| |||||||| ||||   ||||||| | |    
T  20357127 caggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtcag 20357226  T
Q  559 acgcagatcgtgacacgatt 578  Q
    ||||| |||||| |||||||    
T  20357227 acgcaaatcgtggcacgatt 20357246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 40946076 - 40946194
Alignment:
Q  240 tgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 339  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40946076 tgagagttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 40946175  T
Q  340 aatcgtgccacgattggat 358  Q
    ||||||| |||||||||||    
T  40946176 aatcgtgtcacgattggat 40946194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 372 - 579
Target Start/End: Complemental strand, 43504708 - 43504499
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || |    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 43504609  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgca--gatcgt 569  Q
    |||||||||||   || |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||| || |||   |||||    
T  43504608 cgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacagatgcaccaatcgt 43504509  T
Q  570 gacacgattt 579  Q
    ||||||||||    
T  43504508 gacacgattt 43504499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 372 - 557
Target Start/End: Complemental strand, 21646630 - 21646445
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || |    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 21646531  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||||| | ||||||||||||||||||  | ||||||||||||||||||||||| ||||| ||||||| | ||||||||||    
T  21646530 cgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacg 21646445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 358 - 557
Target Start/End: Original strand, 39730931 - 39731131
Alignment:
Q  358 tgtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggt 456  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |    
T  39730931 tgtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtt 39731030  T
Q  457 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    |||||||||| || |||||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| |||||||||    
T  39731031 tgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 39731130  T
Q  557 g 557  Q
    |    
T  39731131 g 39731131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 12406857 - 12406630
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| ||||    
T  12406857 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 12406758  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    | |  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  12406757 aagacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 12406659  T
Q  560 cgcagatcgtgacacgatttgggaaaatc 588  Q
     ||| |||||||||||||||||| |||||    
T  12406658 tgcaaatcgtgacacgatttggggaaatc 12406630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 403 - 577
Target Start/End: Original strand, 1532947 - 1533121
Alignment:
Q  403 atcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacga 502  Q
    |||||||||||| ||||| ||||||||| ||||| | |||||| |||||||| ||||||||||| || |||||||||||| | || ||||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacga 1533046  T
Q  503 tcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat 577  Q
    | ||||||||| |||||||||||||||| ||||||||||||  | |||||||||  || || |||||||||||||    
T  1533047 ttgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgat 1533121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 18409399 - 18409201
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||||| | ||||||||||||| | |||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || || ||||||||| | |  |||||||||||||||  | ||||||||| ||||||| ||| | ||||||||||||||| ||||| ||||    
T  18409299 cagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacg 18409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 18414275 - 18414077
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||| |||||||| | ||||||||||||| | |||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| || || |||||||||||| | || ||||||| |||||||  | ||||||||| ||||||| ||| | ||||||||||||||| ||||| ||||    
T  18414175 cagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacg 18414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 359 - 577
Target Start/End: Complemental strand, 4873722 - 4873505
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  ||||| || ||| |||    
T  4873722 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagatagtttg 4873623  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || ||||| |||||| | || |||||||||||| ||   |||||||||||||||||||||  | ||||||||| ||| ||||||||| | |    
T  4873622 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtc-ttccttgggtccg 4873524  T
Q  559 acgcagatcgtgacacgat 577  Q
      ||| |||||||||||||    
T  4873523 ttgcaaatcgtgacacgat 4873505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 360 - 552
Target Start/End: Original strand, 48408398 - 48408591
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 48408497  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttg 552  Q
    |||||||| || |||||||||||| | |  |||||||||||||||    ||||||||||||||||| ||    ||||||||||||||| |||||    
T  48408498 cagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttg 48408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 7465030 - 7464944
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  7465030 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 7464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 544
Target Start/End: Original strand, 21811751 - 21811923
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaat 470  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||||||| | | | |||||||||| | ||| ||||||||||||     
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatct-gagatgccgtgagcaatgtttgcagggtgcaaaa 21811849  T
Q  471 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | |||||||||||||    
T  21811850 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtc 21811923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 24023831 - 24024035
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||  |  || | ||||||| |||||||  || || |    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaat 24023930  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtga 571  Q
    |||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||   ||| ||||| |  |||||||||||    
T  24023931 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtga 24024029  T
Q  572 cacgat 577  Q
    ||||||    
T  24024030 cacgat 24024035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 372 - 557
Target Start/End: Complemental strand, 25767527 - 25767348
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    |||||||||||||||||||||       ||||||||||||| | ||||| ||||||||||||||||| | ||||||||||| | ||||||||||| || |    
T  25767527 cttcaaatttgtggtctggaaa------gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 25767434  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||||||| || |||||||||||||||  | ||||||||||||||||| ||    |||||||| |||||| ||||| ||||    
T  25767433 cgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtgacg 25767348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 8378950 - 8378864
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  8378950 ttgtgagagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 8378864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 360 - 462
Target Start/End: Complemental strand, 12397492 - 12397390
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||  |  |||||||||||| ||||    
T  12397492 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgc 12397393  T
Q  460 agg 462  Q
    |||    
T  12397392 agg 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 30246641 - 30246727
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||    
T  30246641 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcattgcgccacgattgttgaagcaagattctg 30246727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 34547373 - 34547288
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  34547373 tgtgagagttaacttaaaatcagaaatctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctg 34547288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 44513057 - 44512972
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  44513057 tgtgagagttaacttaaaatcaaaattctggagaattgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 44512972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 7074439 - 7074523
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  7074439 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgtgccacgatggttgaagcaagattc 7074523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 25405045 - 25405129
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  25405045 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 25405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 7069433 - 7069516
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  7069433 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 7069516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 31109070 - 31109287
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagct-aggtt 457  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||   ||||| || |||| || ||    
T  31109070 tgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc-aagtgcctgtaagctaagttt 31109168  T
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||  || || ||||| |||||| | || |||||||||||||||   |||||||||| |||||||||   | ||||||||| ||| | ||||||| |     
T  31109169 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtc-tgccttggggcc 31109267  T
Q  558 gacgcagatcgtgacacgat 577  Q
    |  |||||||||||||||||    
T  31109268 gttgcagatcgtgacacgat 31109287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 25351005 - 25351083
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  25351005 tgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaa 25351083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 25356699 - 25356777
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  25356699 tgtgggagttaacttaaaatcagaaatttggagaatcgtgccacgatggagaagcatcgtgccacgattgttggagcaa 25356777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 48457476 - 48457535
Alignment:
Q  294 tcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgat 353  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48457476 tcgtgccacgattgttgaagcaaaattctagagcaatcactggaaaaatcgtgccacgat 48457535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 244 - 310
Target Start/End: Original strand, 25409809 - 25409875
Alignment:
Q  244 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttg 310  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  25409809 agttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttg 25409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 3320573 - 3320496
Alignment:
Q  244 agttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  3320573 agttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 3320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 44144438 - 44144325
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||||||||||| |  |||||||||||||||||| ||| || ||| ||||| ||||| |    
T  44144438 tgtgagagttaacttaaaatcaggaatctagagaaacgtgccacgatggagaaacaacgtgccacgattgttgaaacaagatcctgaagcaagtcactag 44144339  T
Q  337 aaaaatcgtgccac 350  Q
    |||| |||||||||    
T  44144338 aaaattcgtgccac 44144325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 524
Target Start/End: Complemental strand, 2479947 - 2479795
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| || |||||||| ||||| ||||||||||||||| |||||||||||||||     ||||||||||| | ||||||||||  || |    
T  2479947 cttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttgcagggtgtcaaat 2479848  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||| |||||||| |  ||||||| |||||||  | ||||||| | |||||||    
T  2479847 cgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagt 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 524
Target Start/End: Complemental strand, 47264254 - 47264102
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||| |   || |||||||| | ||| ||||||  || |    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttgtagggtgtcaaat 47264155  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||| ||| |||  |  |||||||||||||||  | ||||||||| |||||||    
T  47264154 cgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagt 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 3325331 - 3325244
Alignment:
Q  235 acttgtgaga-gttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||| |||||||||||||||||| |||| || ||||||||||||||||||||| |||  ||||||| |||||||||| ||||    
T  3325331 acttgtgagaagttaacttaaaatcagaaatctgaagcatcgtgccacgatggagaagcatcgcaccacgatggttgaagcaagattc 3325244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 48457441 - 48457487
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48457441 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 48457487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 18390562 - 18390506
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 416  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18390562 tgttgagattgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 44847632 - 44847696
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 436  Q
    ||||||||||||||| |  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  44847632 cttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 21983859 - 21983761
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtg 465  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    ||||||||||||||| |   || |||||||| | ||||||||||    
T  21983859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttgcagggtg 21983761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 1532897 - 1532945
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 420  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgg 1532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 2120592 - 2120638
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  2120592 tgtgagagttaacttaaaatcagaattctggagtatcgcgccacgat 2120638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 544
Target Start/End: Original strand, 24265684 - 24265861
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 465  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  24265684 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 24265782  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  24265783 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 24265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 3878322 - 3878370
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  3878322 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 3878370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 21989518 - 21989454
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 436  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||    |||||||||||||||    
T  21989518 cttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 588
Target Start/End: Complemental strand, 12397376 - 12397278
Alignment:
Q  489 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |  ||| |||||||||||||||||| |||||    
T  12397376 aaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtgacacgatttggggaaatc 12397278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 16880653 - 16880444
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 465  Q
    |||| ||||||||| ||||| ||||||| ||| | ||||||| ||||||||||  |||||||||||| |  |||  || ||||| |||| |||| ||  |    
T  16880653 attgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacga-tcagggaggcagtgagcctagtttgctggaag 16880555  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 565  Q
    |||| ||||| |||||| | || |||| ||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||| ||||| |  |||||    
T  16880554 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctggggaccgttgcaga 16880456  T
Q  566 tcgtgacacgat 577  Q
    ||||||||||||    
T  16880455 tcgtgacacgat 16880444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 16885508 - 16885299
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 465  Q
    |||| ||||||||| ||||| ||||||| ||| | ||||||| ||||||||||  |||||||||||| |  |||  || ||||| |||| |||| ||  |    
T  16885508 attgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacga-tcagggaggcagtgagcctagtttgctggaag 16885410  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 565  Q
    |||| ||||| |||||| | || |||| ||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||| ||||| |  |||||    
T  16885409 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aacctggggaccgttgcaga 16885311  T
Q  566 tcgtgacacgat 577  Q
    ||||||||||||    
T  16885310 tcgtgacacgat 16885299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 544
Target Start/End: Original strand, 24260926 - 24261005
Alignment:
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  24260926 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 24261005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 80005 - 79955
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||| | ||||||||||| ||||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 42006316 - 42006432
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggag-aatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactg 335  Q
    |||||||||||||||||||||||  || ||||| ||||||  |||| ||||||||   |||||||||||| ||||| ||| || ||| ||||| ||||||    
T  42006316 tgtgagagttaacttaaaatcag-gttttggagaaatcgtctcacgttggagaagtaacgtgccacgattattgaaacaagatcctgaagcaagtcactg 42006414  T
Q  336 gaaaaatcgtgccacgat 353  Q
     |||||||||| ||||||    
T  42006415 aaaaaatcgtggcacgat 42006432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 40837261 - 40837213
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  40837261 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 40837213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 434
Target Start/End: Original strand, 24260828 - 24260895
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 434  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||    
T  24260828 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 1047504 - 1047458
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  1047504 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 1047458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 436
Target Start/End: Complemental strand, 4509369 - 4509335
Alignment:
Q  402 aatcgtgacacgattttggtatcgtgacacgattt 436  Q
    ||||||||||||||||||| |||||||||||||||    
T  4509369 aatcgtgacacgattttgggatcgtgacacgattt 4509335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 436
Target Start/End: Complemental strand, 4511211 - 4511177
Alignment:
Q  402 aatcgtgacacgattttggtatcgtgacacgattt 436  Q
    ||||||||||||||||||| |||||||||||||||    
T  4511211 aatcgtgacacgattttgggatcgtgacacgattt 4511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 6431467 - 6431501
Alignment:
Q  402 aatcgtgacacgattttggtatcgtgacacgattt 436  Q
    ||||||||||||||||||| |||||||||||||||    
T  6431467 aatcgtgacacgattttgggatcgtgacacgattt 6431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 26804344 - 26804393
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||  ||||||||| ||||||||    
T  26804344 ttgtgagagttaacttaaaatcaggtttctacagaatcgtggcacgatgg 26804393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 418  Q
    ||||||||||| || ||||||||||| ||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 1e-95; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 355 - 588
Target Start/End: Original strand, 9035998 - 9036230
Alignment:
Q  355 ggatgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctag 454  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9035998 ggatatgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctag 9036097  T
Q  455 gttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggg 554  Q
    ||||||||||||||||||||| ||| |||| |  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  9036098 gttgcagggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttggg 9036197  T
Q  555 acggacgcagatcgtgacacgatttgggaaaatc 588  Q
        |||||||||||||||||| |||||||||||    
T  9036198 tgttacgcagatcgtgacacga-ttgggaaaatc 9036230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 44203218 - 44203445
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||| |||    
T  44203218 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagctagggttg 44203316  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44203317 caggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 44203415  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  44203416 gacgcaaatcgtgacacga-ttgggaaaatc 44203445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 360 - 581
Target Start/End: Complemental strand, 20622821 - 20622599
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||  ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||||  || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||  |     
T  20622721 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggt 20622622  T
Q  559 acgcagatcgtgacacgatttgg 581  Q
    ||||| |||||| || |||||||    
T  20622621 acgcaaatcgtggcatgatttgg 20622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 40281958 - 40282179
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | ||||||||||    
T  40282058 cagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacg 40282157  T
Q  558 gacgca--gatcgtgacacgat 577  Q
    || |||   |||||||||||||    
T  40282158 gatgcaccaatcgtgacacgat 40282179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 21053540 - 21053760
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||  |||    
T  21053540 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatgc 21053639  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    | ||||| || |||||||||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| | ||||||||||||| | ||||| |||||    
T  21053640 aaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgagacgg 21053739  T
Q  559 acgca--gatcgtgacacgat 577  Q
    | |||   |||||||||||||    
T  21053740 atgcaccaatcgtgacacgat 21053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 9986785 - 9987005
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||||| ||||||||||||| |  ||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctg 9986884  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||| |||| || |||||||||||||| || |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||| | |||||||||||    
T  9986885 cagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacgg 9986984  T
Q  559 acgca--gatcgtgacacgat 577  Q
    | |||   |||||||||||||    
T  9986985 atgcaccaatcgtgacacgat 9987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 2617279 - 2617394
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |    
T  2617279 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagtttcgtgccacgattgttgaagcaaaattctggagcactcact-g 2617377  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  2617378 aaaaatcgtgccacgat 2617394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 19360912 - 19361134
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | |||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| |||   |||||||| |||||| ||||| ||||     
T  19361012 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgt 19361111  T
Q  559 acg--cagatcgtgacacgattt 579  Q
    |||  |  |||||||||||||||    
T  19361112 acgtaccaatcgtgacacgattt 19361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 357 - 522
Target Start/End: Original strand, 19365765 - 19365931
Alignment:
Q  357 atgtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg 455  Q
    ||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| |     
T  19365765 atgtgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggt 19365864  T
Q  456 ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaa 522  Q
    ||||||||||| || |||||||||||| | || |||||||||||||||  | |||||||||||||||    
T  19365865 ttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 51764990 - 51765212
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||| | ||||||||||| | |||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 51765089  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||| | ||||| ||||     
T  51765090 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgtgacgt 51765189  T
Q  559 acg--cagatcgtgacacgattt 579  Q
    |||  |  |||||||||||||||    
T  51765190 acgtaccaatcgtgacacgattt 51765212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 39446082 - 39445866
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | ||||||||| | || |||    
T  39446082 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtttg 39445984  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || ||||| |||||| | || ||||| ||||||||||  |||||||||||||||||||||  | |||||||||||||   ||| ||||| |    
T  39445983 caggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtc-aacctggggaccg 39445885  T
Q  559 acgcagatcgtgacacgat 577  Q
      |||||||||||||||||    
T  39445884 ttgcagatcgtgacacgat 39445866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 44023377 - 44023593
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  44023377 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 44023475  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    | || |||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |    
T  44023476 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccg 44023574  T
Q  559 acgcagatcgtgacacgat 577  Q
      |||||||||||||||||    
T  44023575 ttgcagatcgtgacacgat 44023593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 360 - 484
Target Start/End: Original strand, 24202251 - 24202376
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  459 cagggtgcaaattcgtgacacgattt 484  Q
    |||||||| || ||||||||||||||    
T  24202351 cagggtgccaaatcgtgacacgattt 24202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 544
Target Start/End: Complemental strand, 41391173 - 41391002
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||||||| || |||||||  || || |    
T  41391173 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaat 41391075  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| |||||| | || ||||||||||| |||   ||||||||||| |||||||||  | |||||||||||||    
T  41391074 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtc 41391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 422 - 577
Target Start/End: Original strand, 24793709 - 24793864
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 24793808  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgat 577  Q
    ||||||||| |||||||||||||   ||||||| | |||||| |||||||||||||    
T  24793809 agtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgat 24793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 25439406 - 25439615
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 465  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||||| | | ||||||||| | || ||||||| ||    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggatg 25439504  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 565  Q
    |||| ||||| |||||| | || ||||||||||||||||  |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  |||||    
T  25439505 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc-aacctggggactgttgcaga 25439603  T
Q  566 tcgtgacacgat 577  Q
    ||||||||||||    
T  25439604 tcgtgacacgat 25439615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 2393813 - 2393699
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct-ggagcaatcactg 335  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  || | |||||||    
T  2393813 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttcacgccacgattgttgaagcaagattctatgatc-atcactg 2393715  T
Q  336 gaaaaatcgtgccacg 351  Q
     |||||||||||||||    
T  2393714 taaaaatcgtgccacg 2393699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 544
Target Start/End: Original strand, 1054514 - 1054698
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||| || | ||||||||||| | || |||    
T  1054514 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacga-ttggaggtgccgtgagccaagtttg 1054612  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  1054613 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 1054698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 236 - 355
Target Start/End: Complemental strand, 2401728 - 2401609
Alignment:
Q  236 cttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct-ggagcaatcact 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||  || |  |||||    
T  2401728 cttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcttttcgccacgattgttgaagcaagattctatgatc-gtcact 2401630  T
Q  335 ggaaaaatcgtgccacgattg 355  Q
    | |||||||||||||||||||    
T  2401629 gaaaaaatcgtgccacgattg 2401609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 9521367 - 9521450
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  9521367 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 9521450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 25444599 - 25444808
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 465  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| |  ||||||||||||||| | | ||||||||| | || ||| ||| ||    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttgtaggatg 25444697  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcaga 565  Q
    |||| ||||| |||||| | || ||||||||||||||||  |||||||| | ||||||||||  | |||||||||||||   ||| ||||| |  |||||    
T  25444698 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc-aacctagggaccgttgcaga 25444796  T
Q  566 tcgtgacacgat 577  Q
    ||||||||||||    
T  25444797 tcgtgacacgat 25444808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 13450034 - 13449969
Alignment:
Q  293 ttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgattggat 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13450034 ttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgattggat 13449969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 360 - 524
Target Start/End: Original strand, 13604095 - 13604260
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| | | || |||||||| | |||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||| |||  || |||||||||||||| |   |||||||||| |||  | ||||||||| |||||||    
T  13604195 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 21353857 - 21353772
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  21353857 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 21353772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 25133681 - 25133797
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||||  |||||||||||||||||||||| || ||  ||||| ||| |||    
T  25133681 tgtgagagttaacttaaaatcaggaatctggagaaacgtgtcacgatggagaagcaacgtgccacgattgttgaagcaagatcctaaagcaagtcattgg 25133780  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  25133781 aaaaatcgtgccacgat 25133797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 577
Target Start/End: Original strand, 24786905 - 24787042
Alignment:
Q  440 ggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggac 539  Q
    ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||    
T  24786905 ggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 24787004  T
Q  540 tggtcgttccttgggacggacgcagatcgtgacacgat 577  Q
    |||||   ||||||| | |||||| |||||||||||||    
T  24787005 tggtcaaaccttgggtcagacgcaaatcgtgacacgat 24787042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 2232261 - 2232377
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||| |||||||| |||||||||| ||||  | | |   |||||    
T  2232261 ttgtgagagttaacttaaaatcagaaatctggagcatcatgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagctactgg 2232360  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  2232361 aaaaatcgtgccacgat 2232377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 9526116 - 9526195
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||    
T  9526116 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaa 9526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 23689384 - 23689313
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgtt 309  Q
    |||||||||||||||||||||| || ||| ||||||| ||||||||||||||||| ||| ||||||||||||    
T  23689384 tgtgagagttaacttaaaatcaaaaatctagagaatcatgccacgatggagaagcatcgcgccacgattgtt 23689313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 24793664 - 24793723
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24793664 tgtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 422 - 544
Target Start/End: Complemental strand, 41398778 - 41398657
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||| | | |||||||||| || |||||||  || || ||||| |||||| | || |||||||||||||||   ||||||||||| |||    
T  41398778 atcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  522 agtatccttaataaggactggtc 544  Q
    |||||| || |||||||||||||    
T  41398679 agtatcattgataaggactggtc 41398657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 13599017 - 13598967
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13599017 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 21536125 - 21536170
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 41398809 - 41398764
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  41398809 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 13461392 - 13461333
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggag-aatcgtgccacgatggagaagcttcgt 297  Q
    ||||||||||||||||||||||| || ||| || |||||||||||||||||||||||||||    
T  13461392 tgtgagagttaacttaaaatcaggat-ctgcaggaatcgtgccacgatggagaagcttcgt 13461333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 20291280 - 20291328
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  20291280 tgtgagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 20291328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 577
Target Start/End: Original strand, 24202379 - 24202450
Alignment:
Q  508 aaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtgacacgat 577  Q
    ||||||||||||||||||||||| ||||||||||||| |  ||||||||| |||  || |||||||||||||    
T  24202379 aaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgat 24202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 37070378 - 37070334
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 6822774 - 6822823
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  6822774 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 6822823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 13761576 - 13761625
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  13761576 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 13761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 436
Target Start/End: Original strand, 26644381 - 26644450
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 436  Q
    |||| ||| ||||||||||| ||||||||||| | |||||||| |||||||||  ||||| |||||||||    
T  26644381 attggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 51752103 - 51752152
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  51752103 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 51752152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 544
Target Start/End: Original strand, 43988054 - 43988133
Alignment:
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  43988054 gcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 43988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 20302197 - 20302235
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcg 275  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  20302197 ttgtgagagttaacttaaaatcagatttctgcagaatcg 20302235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 47177077 - 47177123
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  47177077 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 47177123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 47179427 - 47179473
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  47179427 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 47179473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 3282318 - 3282273
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||||  ||||||||||  |||||||||||||||||    
T  3282318 cttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 13659897 - 13659840
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  13659897 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  376 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 51749778 - 51749826
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||   ||||| ||||||||| ||||||||    
T  51749778 tgtgagagttaacttaaaatcaagtttctgcagaatcgtggcacgatgg 51749826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 3e-93; HSPs: 119)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 360 - 581
Target Start/End: Original strand, 6716085 - 6716306
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6716085 tgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 6716184  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  6716185 agggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 6716284  T
Q  560 cgcagatcgtgacacgatttgg 581  Q
    ||| ||||||||||||||||||    
T  6716285 cgcggatcgtgacacgatttgg 6716306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 3617034 - 3617261
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  3617034 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgga-tgccgtgagctagggttg 3617132  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  3617133 caggggtgcaaat-cgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacg 3617231  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  3617232 gacgcaaatcgtgacacga-ttgggaaaatc 3617261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 359 - 588
Target Start/End: Original strand, 54634709 - 54634937
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  54634709 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagttg 54634808  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||  |     
T  54634809 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcttttcttgggtggt 54634908  T
Q  559 acgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||| ||| |||||||| |||||||||||    
T  54634909 acgcaaatcatgacacga-ttgggaaaatc 54634937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 25637013 - 25637240
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| | |||||||| |||    
T  25637013 tgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgc-gagagctagggttg 25637111  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| |||||||  || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25637112 caggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25637210  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  25637211 gacgcaaatcgtgacacga-ttgggaaaatc 25637240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 10055805 - 10056024
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10055805 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10055903  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10055904 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10056002  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  10056003 ggacgcaaatcgtgacacgatt 10056024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 10066915 - 10067134
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10066915 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10067013  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10067014 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10067112  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  10067113 ggacgcaaatcgtgacacgatt 10067134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 358 - 588
Target Start/End: Complemental strand, 4601330 - 4601100
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-t 456  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||| |    
T  4601330 tgtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcgga-tgccgtgagctagggt 4601232  T
Q  457 tgcaggg-tgcaaattcgtgacacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggg 554  Q
    ||||||| ||||||| |||| ||||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4601231 tgcaggggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 4601133  T
Q  555 acggacgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||||||| |||||||||||| |||||||||||    
T  4601132 acggacgcaaatcgtgacacga-ttgggaaaatc 4601100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 10058027 - 10058246
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10058027 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10058125  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10058126 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10058224  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    | ||||| ||||||||||||||    
T  10058225 gtacgcaaatcgtgacacgatt 10058246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 10060249 - 10060468
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10060249 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10060347  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10060348 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10060446  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    | ||||| ||||||||||||||    
T  10060447 gtacgcaaatcgtgacacgatt 10060468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 10062471 - 10062690
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10062471 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10062569  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10062570 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10062668  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    | ||||| ||||||||||||||    
T  10062669 gtacgcaaatcgtgacacgatt 10062690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 10064693 - 10064912
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  10064693 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 10064791  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10064792 caggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10064890  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    | ||||| ||||||||||||||    
T  10064891 gtacgcaaatcgtgacacgatt 10064912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 4599107 - 4598879
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||| |||    
T  4599107 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcgga-tgccgtgagctagggttg 4599009  T
Q  459 caggg-tgcaaattcgtgacacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| ||||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4599008 caggggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4598910  T
Q  557 ggacgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||||| |||||||||||| |||||||||||    
T  4598909 ggacgcaaatcgtgacacga-ttgggaaaatc 4598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 358 - 578
Target Start/End: Original strand, 10208776 - 10208997
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-t 456  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||| |||| |    
T  10208776 tgtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggt 10208874  T
Q  457 tgcaggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggg 554  Q
    ||||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  10208875 tgcaggggtgcaaat-cgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttggg 10208973  T
Q  555 acggacgcagatcgtgacacgatt 578  Q
    ||||||||| ||||||||||||||    
T  10208974 acggacgcaaatcgtgacacgatt 10208997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 422 - 588
Target Start/End: Original strand, 45282628 - 45282793
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 45282727  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||||||| |||||||||||||||| ||||||  | |||||||||||||||||| |||||||||||    
T  45282728 agtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacga-ttgggaaaatc 45282793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 10210978 - 10211206
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||| |||| |||    
T  10210978 tgttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttagga-tgccgtgagttagggttg 10211076  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| |||||||| ||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10211077 caggggtgcaaat-cgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10211175  T
Q  557 ggacgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||||| |||||||||||| |||||||||||    
T  10211176 ggacgcaaatcgtgacacga-ttgggaaaatc 10211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 8478002 - 8477785
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  8478002 tgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 8477903  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
     || ||| || ||||| |||||| | || ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| | |||||||  | |    
T  8477902 tggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgta 8477803  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||||||||||    
T  8477802 cgcaaatcgtgacacgat 8477785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 40372256 - 40372473
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  40372256 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 40372355  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | ||| || |||||    
T  40372356 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacgga 40372455  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||| ||||||    
T  40372456 cgcaaatcgtgccacgat 40372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 51727543 - 51727427
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51727543 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 51727444  T
Q  338 aaaatcgtgccacgatt 354  Q
    |||||||||||||||||    
T  51727443 aaaatcgtgccacgatt 51727427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 422 - 580
Target Start/End: Original strand, 6718331 - 6718489
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtta 6718430  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatttg 580  Q
    ||||||||| |||||||||||||||| ||||||  | |||| |||||||||||||||||    
T  6718431 agtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgacacgatttg 6718489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 4308819 - 4308698
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4308819 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaagcaaaattctagagcaatcactgg 4308720  T
Q  337 aaaaatcgtgccacgattggat 358  Q
    ||||||||||||||||||||||    
T  4308719 aaaaatcgtgccacgattggat 4308698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 43225827 - 43225942
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43225827 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgctacgattgttgaagcaaaattctggagcaatcactgga 43225926  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||||||||||||||    
T  43225927 aaaatcgtgccacgat 43225942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 360 - 580
Target Start/End: Complemental strand, 7167882 - 7167662
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||  ||||||||||||||| ||||    
T  7167882 tgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgc 7167783  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | ||||||| | ||    
T  7167782 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcaga 7167683  T
Q  560 cgcagatcgtgacacgatttg 580  Q
    |||| ||||||||||||||||    
T  7167682 cgcaaatcgtgacacgatttg 7167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 236 - 358
Target Start/End: Complemental strand, 25690895 - 25690773
Alignment:
Q  236 cttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactg 335  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25690895 cttgtgagagttaacttaaaatcagaattctgatgaatcgtgccacgatggagaagcttcgtgccacgattgttgaagaaaaattctggagcaatcactg 25690796  T
Q  336 gaaaaatcgtgccacgattggat 358  Q
    |||||||||||||| ||||||||    
T  25690795 gaaaaatcgtgccatgattggat 25690773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 237 - 358
Target Start/End: Complemental strand, 35918487 - 35918366
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35918487 ttgtgagagttaacttaaaatcagaattatggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagtaatcactgg 35918388  T
Q  337 aaaaatcgtgccacgattggat 358  Q
    |||||||||  |||||||||||    
T  35918387 aaaaatcgtagcacgattggat 35918366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 360 - 563
Target Start/End: Original strand, 800685 - 800889
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    | |||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | ||||||| |||||||| |||||||||     
T  800785 cggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtcgtttcttgggacga 800884  T
Q  559 acgca 563  Q
    |||||    
T  800885 acgca 800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 238 - 358
Target Start/End: Complemental strand, 27101797 - 27101677
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||    
T  27101797 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagttttgtgccatgattgttgaagcaaaattctggaacaatcactgga 27101698  T
Q  338 aaaatcgtgccacgattggat 358  Q
    |||||||||||||||||||||    
T  27101697 aaaatcgtgccacgattggat 27101677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 238 - 352
Target Start/End: Complemental strand, 9605150 - 9605035
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9605150 tgtgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaagtttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 9605051  T
Q  338 -aaaatcgtgccacga 352  Q
     |||||||||||||||    
T  9605050 aaaaatcgtgccacga 9605035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 22172662 - 22172886
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||    
T  22172662 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 22172761  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||||| |||  | |||||||||||||   ||||||  | |     
T  22172762 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtc-aaccttggttccgt 22172860  T
Q  560 cgcagatcgtgacacgatttgggaaa 585  Q
     ||| |||||||||||||||||||||    
T  22172861 tgcaaatcgtgacacgatttgggaaa 22172886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 239 - 358
Target Start/End: Original strand, 29956218 - 29956337
Alignment:
Q  239 gtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaa 338  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  29956218 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcatcggaa 29956317  T
Q  339 aaatcgtgccacgattggat 358  Q
    |||| |||| ||||||||||    
T  29956318 aaattgtgctacgattggat 29956337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 239 - 358
Target Start/End: Original strand, 30005373 - 30005492
Alignment:
Q  239 gtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaa 338  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  30005373 gtgagagttaacttaaaatcagaattctggataatcgtgtcacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcatcggaa 30005472  T
Q  339 aaatcgtgccacgattggat 358  Q
    |||| |||| ||||||||||    
T  30005473 aaattgtgctacgattggat 30005492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 28501152 - 28501377
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  28501152 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28501251  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||   | || ||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||| | ||||||||| |||   ||||||| | ||    
T  28501252 aggacaccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtcaga 28501350  T
Q  560 cgcagatcgtgacacgat-ttgggaaa 585  Q
    |||| ||| ||||||||| ||||||||    
T  28501351 cgcaaatcatgacacgatcttgggaaa 28501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 360 - 581
Target Start/End: Complemental strand, 23198530 - 23198306
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||| | | ||||||||||| | |||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || ||||||||||||||||   ||||||||||||||    ||||||||||||||||| |||   ||||||||||||||| ||||| ||||     
T  23198430 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacgt 23198331  T
Q  559 acg--cagatcgtgacacgatttgg 581  Q
    |||  |  |||||||||||||||||    
T  23198330 acgtaccaatcgtgacacgatttgg 23198306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 376 - 581
Target Start/End: Original strand, 27352097 - 27352302
Alignment:
Q  376 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtg 475  Q
    ||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||  ||||||||||||| | ||||||    | || |||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcagaacaccaaatcgtg 27352196  T
Q  476 acacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacg 575  Q
     |||||| | || |||||||||||||||   |||||||||||||||| ||||  | ||||||||||||| | |||||||||||||||| |||||||||||    
T  27352197 gcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgacacg 27352296  T
Q  576 atttgg 581  Q
    ||||||    
T  27352297 atttgg 27352302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 1306604 - 1306406
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||| |||||||||||||||| |||||||||||| || ||||| ||||||||||||||||| |||| |||||||| | |||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| |||   |||||||| |||||| ||||| ||||    
T  1306504 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 1306406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 28503319 - 28503544
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||    
T  28503319 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28503418  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
     ||  || || ||||| |||||| | || |||||||||||| ||   |||||||||||||||||||||| | ||||||||| |||   ||||||| | ||    
T  28503419 tggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtcaga 28503517  T
Q  560 cgcagatcgtgacacgat-ttgggaaa 585  Q
    |||| ||||||||||||| ||||||||    
T  28503518 cgcaaatcgtgacacgatcttgggaaa 28503544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 360 - 552
Target Start/End: Complemental strand, 23200729 - 23200536
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||| ||||||| | |||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttg 552  Q
    |||||||| || ||||||||||||||||   ||||||||||||||    ||||||||||||||||| |||   ||||||||||||||| |||||    
T  23200629 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttg 23200536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 18657029 - 18656812
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtg-agctaggttg 458  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||| ||| || |||    
T  18657029 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttg 18656930  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |    
T  18656929 caggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccg 18656831  T
Q  559 acgcagatcgtgacacgat 577  Q
      |||||||||||||||||    
T  18656830 ttgcagatcgtgacacgat 18656812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 406 - 579
Target Start/End: Original strand, 2671111 - 2671284
Alignment:
Q  406 gtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcg 505  Q
    ||||||||||||||| ||||||||| ||||||  ||||||||||||||| ||||||| ||| || ||||| |||||| | || |||||||||||||||      
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattt 2671210  T
Q  506 tgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgattt 579  Q
     |||||||||||||||||||||||| ||||||||||||| | |||||||  | ||||| |||||||||||||||    
T  2671211 agaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattt 2671284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 360 - 485
Target Start/End: Complemental strand, 7782712 - 7782586
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||| ||||||| | |||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  459 cagggtgcaaattcgtgacacgatttg 485  Q
    |||||||| || |||||||||||||||    
T  7782612 cagggtgccaaatcgtgacacgatttg 7782586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 524
Target Start/End: Original strand, 33386136 - 33386302
Alignment:
Q  359 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 457  Q
    ||||||||||| | |||||||||||||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | ||    
T  33386136 gtgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 33386235  T
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||||||||| || |||||||||||||| |   ||||||||||||||  | ||||||||| |||||||    
T  33386236 gcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 524
Target Start/End: Original strand, 26928080 - 26928245
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |   ||||||||||| | |||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 26928179  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||||||| || ||||||||| || | |   ||||||||||||||  | |||||||||||||||||    
T  26928180 cagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagt 26928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 16461852 - 16461968
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||  | | ||  |||||    
T  16461852 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgg 16461951  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  16461952 aaaaatcgtgccacgat 16461968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 422 - 573
Target Start/End: Original strand, 8738585 - 8738736
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  8738585 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 8738684  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgaca 573  Q
    ||||||||| ||||||||||||| | |||||| ||||||||| |||||||||    
T  8738685 agtatccttgataaggactggtcataccttggaacggacgcaaatcgtgaca 8738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 422 - 573
Target Start/End: Original strand, 9090823 - 9090974
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  9090823 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 9090922  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgaca 573  Q
    ||||||||| ||||||||||||| | |||||| ||||||||| |||||||||    
T  9090923 agtatccttgataaggactggtcataccttggaacggacgcaaatcgtgaca 9090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 20031883 - 20031765
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggag-aagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcact 334  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||   ||||||||||||||||||||| |||||| || || |||||    
T  20031883 ttgtgagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaaagcaatgtgccacgattgttgaagcaagattctgaaggaagtcact 20031784  T
Q  335 ggaaaaatcgtgccacgat 353  Q
    |||||||||||||||||||    
T  20031783 ggaaaaatcgtgccacgat 20031765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 10949811 - 10949694
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactg 335  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||  |||||||||||||||||| ||| || ||| ||||| ||||||    
T  10949811 ttgtgagagttaacttaaaatcaggaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactg 10949712  T
Q  336 gaaaaatcgtgccacgat 353  Q
    ||||| ||||||||||||    
T  10949711 gaaaattcgtgccacgat 10949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 524
Target Start/End: Complemental strand, 37726299 - 37726134
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||| | | ||||||||||| | |||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggtttg 37726200  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||||||  || |||||||||||||| |   ||||||||||||||  | ||||||| | |||||||    
T  37726199 cagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagt 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 22627695 - 22627580
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 336  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||  ||||||||||||||||||| ||||| ||| || | |||||    
T  22627695 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatctcgccacgattgttgaagcaagattct-gaggaagctactgg 22627597  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  22627596 aaaaatcgtgccacgat 22627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 47878682 - 47878598
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  47878682 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 47878598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 5858195 - 5858282
Alignment:
Q  236 cttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  5858195 cttgtgagagttaacttaaaatcaggaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 5858282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 54192896 - 54192975
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  54192896 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaa 54192975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 29914484 - 29914401
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  29914484 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 29914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 29963637 - 29963554
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  29963637 tgtgggagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 29963554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 10595542 - 10595456
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | | | ||||||||||||||||||| ||||||    
T  10595542 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaaacattgcgccacgattgttgaagcaagattctg 10595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 524
Target Start/End: Original strand, 37408036 - 37408200
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||| ||| ||||||||||||||| |  |||||||||||| | |||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    |||||||  || ||||| ||||| ||| | |||||||||||||||  | ||||||| | |||||||    
T  37408136 cagggtgtcaaatcgtggcacga-ttgtgtaaatcgtgacacgattttcaaacttgttggttaagt 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 54188160 - 54188237
Alignment:
Q  239 gtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  54188160 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaa 54188237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 11079169 - 11079285
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||  ||||||||||||||| ||  || || ||| ||||| |||||||    
T  11079169 tgtgagagttaacttaaaatcagtaatctggagaaacgtgccacgatggagaagcaacgtgccacgattgtttaaaaaagatcctgaagcaagtcactgg 11079268  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||| ||||||||||||    
T  11079269 aaaattcgtgccacgat 11079285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 10208531 - 10208452
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| ||||||||||    
T  10208531 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaa 10208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 358 - 524
Target Start/End: Complemental strand, 27453583 - 27453416
Alignment:
Q  358 tgtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggt 456  Q
    |||||||||||| | |||||||||||||||||| |||| ||| ||||| ||||||||| ||||| ||||||||||||||| | | ||||||||||| | |    
T  27453583 tgtgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtt 27453484  T
Q  457 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    || ||||||| || |||||||| ||||  |   ||||||||||||||  | ||||||||| |||||||    
T  27453483 tgtagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagt 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 6718288 - 6718345
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 45282585 - 45282642
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282585 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 27762557 - 27762441
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | |||| |||| |||||||||||||||||||  |||||||||||||||||| ||| || ||| | ||| |||||||    
T  27762557 tgtgagagttaacttaaaatcaggaatctgaagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaaacaagtcactgg 27762458  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||| | ||||||||||    
T  27762457 aaaatttgtgccacgat 27762441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 10100622 - 10100543
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||| |||||||| ||||||||||    
T  10100622 ttgtgagagttaacttaaaatcagaaatctagagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaa 10100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 10896654 - 10896732
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagca 315  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| ||| |||||||||| |||||||    
T  10896654 ttgtgagagttaacttaaaatcagaaatatggagtatcgtgccacgatggagaagcatcgcgccacgattgctgaagca 10896732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 47883412 - 47883299
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | | ||||||| |||||||||||||||||||  |||| ||||||||||||| ||| || |||  |||| |||||||    
T  47883412 tgtgagagttaacttaaaatcaggaatttggagaaacgtgccacgatggagaagcaacgtgtcacgattgttgaaacaagatcctgatgcaagtcactgg 47883313  T
Q  337 aaaaatcgtgccac 350  Q
    |||| |||||||||    
T  47883312 aaaattcgtgccac 47883299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 2672431 - 2672635
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaaa 469  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||||||  |||| | ||||| ||| | || |||| ||  |||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga--tcggagatgccgggagccaagtttgctggaagcaaa 2672528  T
Q  470 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgt 569  Q
     ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  |||||||||    
T  2672529 atcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aacctggggaccgttgcagatcgt 2672627  T
Q  570 gacacgat 577  Q
    ||||||||    
T  2672628 gacacgat 2672635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 10094599 - 10094515
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||| | |||||| |||||||||| ||||    
T  10094599 ttgtgagagttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgtcacgatggttgaagcaagattc 10094515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 10201485 - 10201401
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||| ||| |||||||| |||||||||| ||||    
T  10201485 ttgtgagatttaacttaaaatcagaaatctggagtatcgttccacgatggagaagcatcgcgccacgatggttgaagcaagattc 10201401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 43228067 - 43228131
Alignment:
Q  294 tcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgattggat 358  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  43228067 tcgtgccacgactgttgaagcaaaatcctggagcaatcacgggaaaaatcgtgccacgattggat 43228131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 10901397 - 10901463
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacg 303  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||    
T  10901397 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacg 10901463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 422 - 581
Target Start/End: Complemental strand, 32143884 - 32143723
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||| | | ||||||||||||| ||||||||||| || |||||||||||| | |   ||||||||||||||  | ||||||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgtta 32143785  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgca--gatcgtgacacgatttgg 581  Q
    ||| | |   |||||||| |||||| ||||| |||| ||| |   |||||||||||||||||    
T  32143784 agttttcaagataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttgg 32143723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 4535261 - 4535347
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||  | ||||||||||| |  ||||||||||||||  |||||||||||||||||| ||| ||||||    
T  4535261 ttgtgagagttaacttaaaatcatgaatctggagaatcatatcacgatggagaagcaacgtgccacgattgttgaaacaagattctg 4535347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 43228031 - 43228077
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43228031 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 43228077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 353
Target Start/End: Complemental strand, 48390725 - 48390635
Alignment:
Q  264 tctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactggaaaaatcgtgccacgat 353  Q
    |||||||||  ||| ||||||||||||||  |||||||| ||||||||||||| ||||||||| || |||||||||||||||||| |||||    
T  48390725 tctggagaaatgtgtcacgatggagaagcaacgtgccacaattgttgaagcaagattctggaggaagtcactggaaaaatcgtgctacgat 48390635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 10613293 - 10613224
Alignment:
Q  254 aaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||||| ||||||    
T  10613293 aaatcagaaatctggagaatcgtgccacgatggagaaacatcgcaccacgattgttgaagcaagattctg 10613224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 2676587 - 2676791
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaaa 469  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  ||||||||||||  |||| | || || ||| | || |||| ||  |||||    
T  2676587 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga--tcggagatgtcgggagccaagtttgctggaagcaaa 2676684  T
Q  470 ttcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagatcgt 569  Q
     ||||| |||||| | || |||||||||||||||   |||||||||| |||||| |||  | |||||||||||||   ||| ||||| |  |||||||||    
T  2676685 atcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtc-aacctggggaccgttgcagatcgt 2676783  T
Q  570 gacacgat 577  Q
    ||||||||    
T  2676784 gacacgat 2676791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 411
Target Start/End: Original strand, 8738540 - 8738593
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 411  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  8738540 tgtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgaca 8738593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 411
Target Start/End: Original strand, 9090778 - 9090831
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 411  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  9090778 tgtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgaca 9090831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 32143928 - 32143868
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  369 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 27974446 - 27974493
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27974446 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 36029709 - 36029658
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 418  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttt 36029658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 544
Target Start/End: Complemental strand, 8512820 - 8512643
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 465  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  8512820 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 8512722  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  8512721 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 8512643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 21711818 - 21711768
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21711818 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 422 - 524
Target Start/End: Original strand, 27986001 - 27986103
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| || |||||||||||||  |   ||||||||||||||  | ||||||||| ||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggtta 27986100  T
Q  522 agt 524  Q
    |||    
T  27986101 agt 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 6302984 - 6303032
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  6302984 tgtgagagttaacttaaaatcagaaatctggagcatcgcgccacgatgg 6303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 7782603 - 7782535
Alignment:
Q  489 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacg 7782535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 27543946 - 27543994
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  27543946 tgtgagagttaacttaaaatcagaaatttggagtatcgtgccacgatgg 27543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 544
Target Start/End: Complemental strand, 32476066 - 32475887
Alignment:
Q  365 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg-caggg 463  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||   || | || |||||| | |||  | |      
T  32476066 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggag-gcagtgagccaagttctctgaa 32475968  T
Q  464 tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
     ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  32475967 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 32475887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 544
Target Start/End: Complemental strand, 32480924 - 32480745
Alignment:
Q  365 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg-caggg 463  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| |  |||||||||||||   || | || |||||| | |||  | |      
T  32480924 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggag-gcagtgagccaagttctctgaa 32480826  T
Q  464 tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
     ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  32480825 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 32480745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 25388617 - 25388668
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggag 288  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||    
T  25388617 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatggag 25388668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 544
Target Start/End: Complemental strand, 8517700 - 8517523
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 465  Q
    |||| ||||||||| ||||| | | ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  8517700 attgacttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 8517602  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  8517601 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 8517523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 27985971 - 27986017
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 39032025 - 39032075
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  39032025 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 5191374 - 5191419
Alignment:
Q  239 gtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  5191374 gtgagagttaacttaaaatcagatttctgcagaatcgtggcacgat 5191419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 7606964 - 7606915
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  7606964 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatgg 7606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 22114843 - 22114794
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  22114843 ttgtgagagttaacttaaaatcaggtttctgtagaatcgtggcacgatgg 22114794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 38210064 - 38210112
Alignment:
Q  235 acttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  38210064 acttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 38210112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 40735015 - 40735063
Alignment:
Q  369 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||||||| |||| ||||||  |||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 418
Target Start/End: Complemental strand, 40845280 - 40845220
Alignment:
Q  359 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 418  Q
    ||||||||||| |||||||||||| || | ||| ||||||| |||||||||||||||||||    
T  40845280 gtgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 45882659 - 45882734
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 313  Q
    ||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  45882659 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 45882734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 410
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgac 410  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  1730916 attggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 18162405 - 18162520
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctgga-gaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc-tggagcaa-tcact 334  Q
    ||||||||||||||||||||||| | |||| |  ||||||||||||||  ||||||  ||||||||||| |||||||  |  ||| || ||||| |||||    
T  18162405 tgtgagagttaacttaaaatcagga-tctgcataaatcgtgccacgataaagaagcaacgtgccacgatggttgaag--attttcgtgaagcaagtcact 18162501  T
Q  335 ggaaaaatcgtgccacgat 353  Q
    |||||||||||||||||||    
T  18162502 ggaaaaatcgtgccacgat 18162520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 38002494 - 38002569
Alignment:
Q  241 gagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||| | ||||||||| |||| || |||||| ||||  | || || ||||||||||||||    
T  38002494 gagagttaacttaaaatcagtaatctggagaaacgtgtcatgatggataagcaacatgtcatgattgttgaagcaa 38002569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 6066291 - 6066241
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggag 288  Q
    |||||||||||||||||||||||  ||||| ||||| ||| ||||||||||    
T  6066291 tgtgagagttaacttaaaatcaggtttctgcagaattgtggcacgatggag 6066241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 27038658 - 27038608
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| |||||| |||||||| ||||| ||||| ||||||||||||||||||    
T  27038658 attggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 40592252 - 40592302
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| |||||    
T  40592252 attggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||| ||||||||||| || |||||||| ||||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 50493676 - 50493722
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  50493676 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgat 50493722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 53896754 - 53896708
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||    
T  53896754 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgat 53896708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 16498637 - 16498694
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  16498637 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 18097423 - 18097374
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| | ||||||| ||||||||    
T  18097423 ttgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatgg 18097374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 18099708 - 18099659
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| | ||||||| ||||||||    
T  18099708 ttgtgagagttaacttaaaatcaggtttctgcaaaatcgtggcacgatgg 18099659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 35777163 - 35777208
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||| ||| ||||| ||||||||| |||||    
T  35777163 tgtgagagttaacttaaaattagatttctgcagaatcgtggcacga 35777208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 3859317 - 3859365
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| | ||||||| ||||||||    
T  3859317 tgtgagagttaacttaaaatcaggtttctgcataatcgtggcacgatgg 3859365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 6e-88; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 3439088 - 3439314
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3439088 tgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 3439187  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  | |    
T  3439188 agggtgcaaaatcgtgacacgatttggg-aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggta 3439286  T
Q  560 cgcagatcgtgacacgatttgggaaaatc 588  Q
    |||| |||||| ||||| |||||||||||    
T  3439287 cgcatatcgtggcacga-ttgggaaaatc 3439314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 358 - 578
Target Start/End: Original strand, 15290141 - 15290362
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-t 456  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||||  ||||||||| |||| |    
T  15290141 tgtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcgga-tgccgtgagttagggt 15290239  T
Q  457 tgcaggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggg 554  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15290240 tgcaggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttggg 15290338  T
Q  555 acggacgcagatcgtgacacgatt 578  Q
    ||||||||| ||||||||||||||    
T  15290339 acggacgcaaatcgtgacacgatt 15290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 358 - 578
Target Start/End: Original strand, 15470510 - 15470731
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-t 456  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||||  ||||||||| |||| |    
T  15470510 tgtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcgga-tgccgtgagttagggt 15470608  T
Q  457 tgcaggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttggg 554  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15470609 tgcaggggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttggg 15470707  T
Q  555 acggacgcagatcgtgacacgatt 578  Q
    ||||||||| ||||||||||||||    
T  15470708 acggacgcaaatcgtgacacgatt 15470731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 360 - 578
Target Start/End: Complemental strand, 42575909 - 42575690
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||| |||| |||    
T  42575909 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcgga-tgccgtgagttagggttg 42575811  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  42575810 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggac 42575712  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  42575711 ggacgcaaatcgtgacacgatt 42575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 4759534 - 4759751
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| ||||    
T  4759534 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgc 4759633  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | |||||| |||||    
T  4759634 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacgga 4759733  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||||||||||    
T  4759734 cgcaaatcgtgacacgat 4759751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 33037287 - 33037505
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  33037287 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 33037386  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||||||| |||||||||  | ||||||||||||| | |||||| |||||    
T  33037387 aggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacgga 33037486  T
Q  560 cgcagatcgtgacacgatt 578  Q
    |||| ||||||||||||||    
T  33037487 cgcaaatcgtgacacgatt 33037505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 359 - 577
Target Start/End: Complemental strand, 30656283 - 30656065
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||    
T  30656283 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttg 30656184  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| |||||||||||||   ||||||| | |    
T  30656183 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcag 30656084  T
Q  559 acgcagatcgtgacacgat 577  Q
    ||||| |||||||||||||    
T  30656083 acgcaaatcgtgacacgat 30656065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 360 - 581
Target Start/End: Original strand, 18852627 - 18852848
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  18852627 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 18852726  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | ||||||| | ||    
T  18852727 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcaga 18852826  T
Q  560 cgcagatcgtgacacgatttgg 581  Q
    ||||||||||||||||||||||    
T  18852827 cgcagatcgtgacacgatttgg 18852848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 36980014 - 36979797
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  36980014 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 36979915  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | |||||||  | |    
T  36979914 aggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgta 36979815  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||||||||||    
T  36979814 cgcaaatcgtgacacgat 36979797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 360 - 580
Target Start/End: Original strand, 18870021 - 18870241
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  | || |||||||||| ||||    
T  18870021 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgc 18870120  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||||||| | ||||||| | ||    
T  18870121 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcaga 18870220  T
Q  560 cgcagatcgtgacacgatttg 580  Q
    |||||||||||||||||||||    
T  18870221 cgcagatcgtgacacgatttg 18870241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 1261428 - 1261611
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 472  Q
    |||||||||||||| ||||||||||  ||||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||| ||||||||||| || ||    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatc 1261527  T
Q  473 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    |||||||||| | || |||||||||||||||  | ||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  1261528 gtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggac 1261611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 359 - 563
Target Start/End: Original strand, 2627317 - 2627522
Alignment:
Q  359 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 457  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | | ||||||||| | ||    
T  2627317 gtgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggttt 2627416  T
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||| ||||| || |||||||||||||| || |||||||||||||||    ||||||||||||||||| ||| | ||||||| |||||||| |||| ||||    
T  2627417 gcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtcgtttcttgtgacg 2627516  T
Q  558 gacgca 563  Q
     |||||    
T  2627517 tacgca 2627522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 360 - 544
Target Start/End: Original strand, 10683739 - 10683923
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  10683739 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 10683838  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||    
T  10683839 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 10683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 422 - 578
Target Start/End: Original strand, 25689604 - 25689759
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||  || ||||||| |||||||||||||||||||||||||    
T  25689604 atcgtgacacgatttcggg-tgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatt 578  Q
    ||||||||| ||||||||||||||||||||||   | || || ||||||||||||||    
T  25689703 agtatccttgataaggactggtcgttccttggtttgtacacaaatcgtgacacgatt 25689759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 367 - 578
Target Start/End: Complemental strand, 6311928 - 6311718
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgc 466  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||  ||    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgc 6311829  T
Q  467 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcagat 566  Q
     || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| |||   ||||||| | || ||| ||    
T  6311828 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtc-aaccttgggtcagatgcaaat 6311730  T
Q  567 cgtgacacgatt 578  Q
    ||||||||||||    
T  6311729 cgtgacacgatt 6311718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 7289427 - 7289653
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 458  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||  ||| ||| |||||||| |||    
T  7289427 tgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagtttg 7289526  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || |||||||||||| | ||||||||||||||||||   |||||||||||||||||||||| | ||||||||| ||| | ||||||  | |    
T  7289527 caggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttggatcag 7289625  T
Q  559 acgcagatcgtgacacgat-ttgggaaa 585  Q
    | ||| ||||||||||||| ||||||||    
T  7289626 atgcaaatcgtgacacgatcttgggaaa 7289653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 246 - 353
Target Start/End: Complemental strand, 22685197 - 22685090
Alignment:
Q  246 ttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgt 345  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  22685197 ttaacttaaaatcagaattctgaagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaaccaaaattctggagcaatcactggaaaaattgt 22685098  T
Q  346 gccacgat 353  Q
    ||||||||    
T  22685097 gccacgat 22685090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 26288517 - 26288319
Alignment:
Q  360 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | | ||||||||||| | |||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26288418  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || ||||||||| || | || |||||||||||| ||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  26288417 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 26288319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 26301774 - 26301576
Alignment:
Q  360 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | | ||||||||||| | |||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26301675  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || ||||||||| || | || |||||||||||| ||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  26301674 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 26301576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 26313768 - 26313570
Alignment:
Q  360 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | | ||||||||||| | |||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26313669  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || ||||||||| || | || |||||||||||| ||  | ||||||||||||||||| ||| | ||||||||||||||| ||||| ||||    
T  26313668 cagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacg 26313570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 39784325 - 39784541
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  39784325 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 39784423  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    | || |||||| ||||| |||||| | || |||||||||||||||   |||||||| | ||||||||||  | |||||||||||||   ||| ||||| |    
T  39784424 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc-aacctggggaccg 39784522  T
Q  559 acgcagatcgtgacacgat 577  Q
      |||||||||||||||||    
T  39784523 ttgcagatcgtgacacgat 39784541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 483
Target Start/End: Original strand, 31042908 - 31043032
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| | |||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  459 cagggtgcaaattcgtgacacgatt 483  Q
    |||||||| || |||||||||||||    
T  31043008 cagggtgccaaatcgtgacacgatt 31043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 360 - 540
Target Start/End: Original strand, 25327664 - 25327844
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||  |  || ||||||||| ||||    
T  25327664 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgc 25327763  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggact 540  Q
    |||  || || || || |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||    
T  25327764 aggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 25327844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 21033519 - 21033637
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    ||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||  || || |||| |||||||    
T  21033519 ttgtgagagttaacttaaaatctaaaaactggagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagtttgtgaagcagtcactgg 21033618  T
Q  337 aaaaatcgtgccacgattg 355  Q
    |||||||||||||| ||||    
T  21033619 aaaaatcgtgccacaattg 21033637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 353
Target Start/End: Original strand, 3275955 - 3276068
Alignment:
Q  241 gagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactggaaa 339  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||| |||||| || || ||||| ||||    
T  3275955 gagagttaacttaaaatcagaaatctggagaaacgtgccacgatggagaagcaatgtgccacgattgttgaagcaagattctgaaggaagtcacttgaaa 3276054  T
Q  340 aatcgtgccacgat 353  Q
    ||||||||||||||    
T  3276055 aatcgtgccacgat 3276068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 9021638 - 9021553
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||    
T  9021638 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctg 9021553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 29555318 - 29555232
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||    
T  29555318 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaagattctg 29555232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 355
Target Start/End: Complemental strand, 23180091 - 23179974
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||| | |||||||||| ||| ||||||  |   ||||||||    
T  23180091 tgtgagagttaacttaaaatcaggaatctggagaatcgtgctacgatggagaagcatcgtgctatgattgttgaaacaagattctgaggtcgtcactgga 23179992  T
Q  338 aaaatcgtgccacgattg 355  Q
    ||||||||| ||||||||    
T  23179991 aaaatcgtgtcacgattg 23179974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 4813019 - 4812935
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  4813019 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 4812935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 372 - 524
Target Start/End: Complemental strand, 7412939 - 7412787
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||  |   ||||||||||| | ||||||||||  || |    
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttgcagggtgtcaaat 7412840  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||||  || |||| |  |||||||||||||||  | ||||||||| |||||||    
T  7412839 cgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 25684295 - 25684379
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  25684295 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 25684379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 16757776 - 16757661
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||| |||||||| |||||||||| ||||  | | |   ||||||    
T  16757776 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgga 16757677  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||||||||||||||    
T  16757676 aaaatcgtgccacgat 16757661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 590465 - 590549
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||  |||||| ||| ||||||||||||||||||| ||||    
T  590465 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgataaagaagcatcgcgccacgattgttgaagcaagattc 590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 422 - 578
Target Start/End: Original strand, 10688661 - 10688816
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||  ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 10688760  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgatt 578  Q
    ||||||  ||||||||||| |||   ||||||| | || ||| ||||||||||||||    
T  10688761 agtatcactaataaggacttgtc-aaccttgggtcagatgcaaatcgtgacacgatt 10688816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 28332283 - 28332367
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| | |||||||| ||||    
T  28332283 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattc 28332367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 28895152 - 28895268
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||| |||||||||||| | |||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||  | | |   |||||    
T  28895152 ttgtgagacttaacttaaaataaaaattttggagaatcgtgccacgatgtagaagcatcgcgccacgattgttgaagcaagattcctgggaagctactgg 28895251  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  28895252 aaaaatcgtgccacgat 28895268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 28327561 - 28327644
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| | |||||||| ||||    
T  28327561 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggctgaagcaagattc 28327644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 25689561 - 25689618
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25689561 tgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 16753053 - 16752937
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||| |||| || ||| |||||||| |||||||||| ||||  | | |   |||||    
T  16753053 ttgtgagacttaacttaaaatcagaaatctggagcatcgtgccacgatagagaggcatcgcgccacgatggttgaagcaagattcctgggaagctactgg 16752954  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  16752953 aaaaatcgtgccacgat 16752937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 10688618 - 10688675
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10688618 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 577
Target Start/End: Complemental strand, 35745971 - 35745762
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||| |  |||||||||||||  ||| | |||||||||| | ||| |  ||      
T  35745971 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgttggaa 35745874  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |  ||||    
T  35745873 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtc-aacctggggaccgttgcag 35745775  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  35745774 atcgtgacacgat 35745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 5701959 - 5702009
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5701959 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 4456620 - 4456575
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 43079344 - 43079392
Alignment:
Q  235 acttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  43079344 acttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 43079392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 18812667 - 18812713
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  18812667 ttgtgagagttaacttaaaatcaggtttctgaagaatcgtggcacga 18812713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 43081721 - 43081767
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  43081721 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 43081767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 18810483 - 18810528
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  18810483 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 18810528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 23799105 - 23799149
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||||||||||| || |||||||| |||||||| |||||||||    
T  23799105 ttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 163; Significance: 9e-87; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 5859 - 6087
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||  | |||||||||||||||| |||    
T  5859 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattg-gaggtgccgtgagctagggttg 5957  T
Q  459 cagggtgcaaattcgtgacacgatt-tgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5958 cagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6057  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  6058 gacgcaaatcgtgacacga-ttgggaaaatc 6087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 8392982 - 8393207
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  8392982 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8393080  T
Q  459 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    || ||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||| || ||||||  |    
T  8393081 caggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggtgg 8393179  T
Q  558 gacgcagatcgtgacacgatttgggaaa 585  Q
     |||||||||||||||||||||||||||    
T  8393180 tacgcagatcgtgacacgatttgggaaa 8393207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 8395191 - 8395416
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  8395191 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8395289  T
Q  459 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    || ||||||||| ||||  |||||||||||||||||||||||| |||  |||||||||||||||||||||| | |||||||||||||||| ||||||  |    
T  8395290 caggggtgcaaa-tcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtgg 8395388  T
Q  558 gacgcagatcgtgacacgatttgggaaa 585  Q
     |||||||||||||||||||||||||||    
T  8395389 tacgcagatcgtgacacgatttgggaaa 8395416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 7122267 - 7122494
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||    
T  7122267 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcgga-tgccgtgagctagggttg 7122365  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7122366 caggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 7122464  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  7122465 gacgcaaatcgtgacacga-ttgggaaaatc 7122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 5135649 - 5135868
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  5135649 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 5135747  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5135748 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5135846  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  5135847 ggacgcaaatcgtgacacgatt 5135868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 360 - 578
Target Start/End: Original strand, 5137875 - 5138094
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| |||    
T  5137875 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcgga-tgccgtgagttagggttg 5137973  T
Q  459 caggg-tgcaaattcgtgacacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||||| ||||||| |||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  5137974 caggggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5138072  T
Q  557 ggacgcagatcgtgacacgatt 578  Q
    ||||||| ||||||||||||||    
T  5138073 ggacgcaaatcgtgacacgatt 5138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 24742577 - 24742360
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  24742577 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 24742478  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| | ||| || |||||    
T  24742477 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacgga 24742378  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||| ||||||    
T  24742377 cgcaaatcgtgccacgat 24742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 360 - 552
Target Start/End: Original strand, 7124489 - 7124681
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 458  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  7124489 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 7124587  T
Q  459 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttg 552  Q
    || ||||||||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  7124588 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttg 7124681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 360 - 563
Target Start/End: Complemental strand, 31495902 - 31495698
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||| | |||||||||||||||| |||||||||     
T  31495802 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacga 31495703  T
Q  559 acgca 563  Q
    |||||    
T  31495702 acgca 31495698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 359 - 585
Target Start/End: Complemental strand, 51521051 - 51520826
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  || |||||||||||| |||    
T  51521051 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttg 51520952  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || ||||| |||||| | || ||||| |||||||||   |||||||||||||||||||||| | |||||||||| || | ||||||| | |    
T  51520951 caggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatc-taccttgggtcag 51520853  T
Q  559 acgcagatcgtgacacgatttgggaaa 585  Q
    ||||| |||||||||||||||||||||    
T  51520852 acgcaaatcgtgacacgatttgggaaa 51520826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 238 - 358
Target Start/End: Original strand, 47868195 - 47868315
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  47868195 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgaagaagcttcgtgtcaccattgttgaagcaaaattttggagcaatcactgga 47868294  T
Q  338 aaaatcgtgccacgattggat 358  Q
    |||||||||||||||||||||    
T  47868295 aaaatcgtgccacgattggat 47868315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 6764654 - 6764769
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6764654 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcattgga 6764753  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||| ||||||||||    
T  6764754 aaaattgtgccacgat 6764769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 2485390 - 2485278
Alignment:
Q  240 tgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2485390 tgagagttaacttaaaatcaga-ttcaggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 2485292  T
Q  340 aatcgtgccacgat 353  Q
    ||||||||||||||    
T  2485291 aatcgtgccacgat 2485278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 242 - 358
Target Start/End: Complemental strand, 8631958 - 8631842
Alignment:
Q  242 agagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaa 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||    
T  8631958 agagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggaacaatcactaaaaaaa 8631859  T
Q  342 tcgtgccacgattggat 358  Q
    |||||||| ||||||||    
T  8631858 tcgtgccaagattggat 8631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 360 - 585
Target Start/End: Original strand, 56141511 - 56141737
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | || | |||||||||| ||||    
T  56141511 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgc 56141610  T
Q  460 agggtg-caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||  | |||| ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||| | ||||||||||||| | ||||||| | |    
T  56141611 aggacgccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcag 56141709  T
Q  559 acgcagatcgtgacacgat-ttgggaaa 585  Q
    | ||| ||||||||||||| ||||||||    
T  56141710 atgcaaatcgtgacacgatcttgggaaa 56141737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 13992879 - 13992681
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | || |||||||| | |||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||||| || |||||||||||||||  | ||||||||||||||||| | | | ||||||||||||| | ||||| ||||    
T  13992779 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacg 13992681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 359 - 581
Target Start/End: Original strand, 28467976 - 28468201
Alignment:
Q  359 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt 457  Q
    ||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||| ||||||||| | | ||||||||||| | ||    
T  28467976 gtgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggttt 28468075  T
Q  458 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||| || |||||||||||| | ||||||||||||||||||  | ||||||||||||||||| ||  | ||||||||||||||| ||||| ||||    
T  28468076 gcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgacg 28468175  T
Q  558 gacg--cagatcgtgacacgatttgg 581  Q
     |||  || |||||||||||| ||||    
T  28468176 tacgtacaaatcgtgacacgacttgg 28468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 9223899 - 9224115
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| ||||    
T  9223899 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 9223998  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  9223999 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 9224097  T
Q  560 cgcagatcgtgacacgat 577  Q
     |||||||||||||||||    
T  9224098 tgcagatcgtgacacgat 9224115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 9228686 - 9228902
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |  |||||||||| | ||||    
T  9228686 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgc 9228785  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  9228786 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 9228884  T
Q  560 cgcagatcgtgacacgat 577  Q
     |||||||||||||||||    
T  9228885 tgcagatcgtgacacgat 9228902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 5733247 - 5733030
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtg-agctaggttg 458  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||| ||| || |||    
T  5733247 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttg 5733148  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    ||||  || || |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||   ||| ||||| |    
T  5733147 caggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccg 5733049  T
Q  559 acgcagatcgtgacacgat 577  Q
      |||||||||||||||||    
T  5733048 ttgcagatcgtgacacgat 5733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 422 - 579
Target Start/End: Complemental strand, 29761196 - 29761039
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 29761097  T
Q  522 agtatccttaataaggactggtcgttccttgggacggacgcagatcgtgacacgattt 579  Q
    ||||||||| ||||||||||||| | |||||| ||||||||| |||||| ||||||||    
T  29761096 agtatccttgataaggactggtcataccttggtacggacgcaaatcgtggcacgattt 29761039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 4884530 - 4884646
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||  |||| |||||||    
T  4884530 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcaacgtgtcacgattgttgaagcaagattctaaagcagtcactgg 4884629  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||| ||||||||||    
T  4884630 aaaaattgtgccacgat 4884646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 360 - 544
Target Start/End: Complemental strand, 18856309 - 18856125
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  18856309 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 18856211  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    | || |||||| ||||| || ||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  18856210 ctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 18856125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 544
Target Start/End: Complemental strand, 3814605 - 3814422
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |   |||| ||| || ||||    
T  3814605 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgc 3814506  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    | |  || || ||||| ||||||||||| |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  3814505 aagacgccaaatcgtgtcacgatttggg-aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 3814422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 8528918 - 8529033
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actgg 336  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||| ||| || | |||||    
T  8528918 tgtgagagttaacttaaaatcagatttctggagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattct-gaggaagctactgg 8529016  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  8529017 aaaaatcgtgccacgat 8529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 367 - 544
Target Start/End: Original strand, 45347324 - 45347501
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 465  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| || | | ||||||||| | || |||| || ||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacga-ttagagatgccgtgagccaagtttgctggatg 45347422  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  45347423 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 45347501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 16489001 - 16489086
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  16489001 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 16489086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 18586615 - 18586731
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatc-actg 335  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||| ||| || | ||||    
T  18586615 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattct-gaggaagctactg 18586713  T
Q  336 gaaaaatcgtgccacgat 353  Q
    ||||||| ||||||||||    
T  18586714 gaaaaattgtgccacgat 18586731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 40636868 - 40636953
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  40636868 tgtgagagttaacttaaaatcagaattttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 40636953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 16689472 - 16689358
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||| || |||||||||||||||  || || |||| ||||||||    
T  16689472 tgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagc-tcgttccgcgattgttgaagcaagtttttgaagcagtcactgga 16689374  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||||||||||||||    
T  16689373 aaaatcgtgccacgat 16689358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 15316629 - 15316715
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||    
T  15316629 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctg 15316715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 31300073 - 31300159
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||    
T  31300073 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctg 31300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 15311993 - 15312078
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct 322  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||    
T  15311993 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcaccacgattgttgaagcaagattct 15312078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 323
Target Start/End: Original strand, 15830817 - 15830898
Alignment:
Q  242 agagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||    
T  15830817 agagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctg 15830898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 484
Target Start/End: Original strand, 31985127 - 31985252
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||| |||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | | ||||||||||| | |    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagttag 31985226  T
Q  459 cagggtgcaaattcgtgacacgattt 484  Q
    |||||||| || ||||||||||||||    
T  31985227 cagggtgccaaatcgtgacacgattt 31985252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 400 - 540
Target Start/End: Original strand, 18712295 - 18712435
Alignment:
Q  400 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgaca 499  Q
    ||||||||||||||||||||| ||||||||||||||||  |  |||||||||||| |||||||  || || ||||| |||||| | || |||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgaca 18712394  T
Q  500 cgatcgtgaaacttgctcgttaagtatccttaataaggact 540  Q
    ||||   |||||||||||||||||||||  | |||||||||    
T  18712395 cgattcagaaacttgctcgttaagtatcactgataaggact 18712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 11853202 - 11853285
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  11853202 tgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 11853285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 18860521 - 18860446
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 435  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18860521 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 4556588 - 4556511
Alignment:
Q  235 acttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaa 312  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||  | ||||||||||||||||    
T  4556588 acttgtgagagttaacttaaaatctgaaaactggagaatcgtgccacgatggagaagcaacatgccacgattgttgaa 4556511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 25699401 - 25699517
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactgg 336  Q
    ||||||||||||||||||||||| | || | ||||  ||||||||||||||||||  |||||||||||||||||| ||| || ||| ||||| |||||||    
T  25699401 tgtgagagttaacttaaaatcaggaatcagaagaaatgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactgg 25699500  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||| ||||| ||||||    
T  25699501 aaaattcgtgacacgat 25699517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 26086292 - 26086240
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaa 290  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26086292 tgtgagagttaacttaaaatcagaattctagagaatcgtgccacgatggagaa 26086240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 7050803 - 7050728
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaa 312  Q
    |||||||||| | ||||||||||| | ||||||||| ||||||||||| |||||||  ||||||||||||||||||    
T  7050803 ttgtgagagtcagcttaaaatcaggaatctggagaaacgtgccacgatagagaagcaacgtgccacgattgttgaa 7050728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 5148294 - 5148196
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtg 465  Q
    |||| ||||||||||||||| |||||||| || |||||||||||||||||||   | ||||||||||||| |   || |||||||||| ||||||||||    
T  5148294 attggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttgcagggtg 5148196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 420
Target Start/End: Original strand, 8689044 - 8689097
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 420  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8689044 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 29761227 - 29761182
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29761227 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Complemental strand, 5143859 - 5143807
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5143859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 416  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 16631068 - 16631143
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaa-tcgtgccacgatggagaagcttcgtgccacgattgttgaag 313  Q
    |||||||||||||||||||||||  ||||||| || ||||||||||||  ||||||  |||||||||||||||||||    
T  16631068 tgtgagagttaacttaaaatcagg-ttctggaaaaatcgtgccacgattcagaagcaacgtgccacgattgttgaag 16631143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 5268699 - 5268750
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 418  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  5268699 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 6742896 - 6742946
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  6742896 attggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 16622774 - 16622824
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 544
Target Start/End: Original strand, 45356861 - 45356982
Alignment:
Q  423 tcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    |||||||||||||| | | |||||||||| | ||| || || |||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||    
T  45356861 tcgtgacacgattt-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggtta 45356959  T
Q  522 agtatccttaataaggactggtc 544  Q
    ||||||  | |||||||||||||    
T  45356960 agtatcactgataaggactggtc 45356982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 3825113 - 3825064
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  3825113 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtgacacgatgg 3825064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 7941133 - 7941181
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  7941133 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 7941181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 37089910 - 37089866
Alignment:
Q  242 agagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  37089910 agagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 37089866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 38408992 - 38409039
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| ||||||    
T  38408992 ttgtgagagttaacttaaaattagatttctgcagaatcgtggcacgat 38409039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 4569751 - 4569817
Alignment:
Q  284 tggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactggaaaaatcgtgcca 349  Q
    |||||||||  |||||||||||||||||| ||| || ||| ||||| ||||||||||| ||||||||    
T  4569751 tggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactggaaaattcgtgcca 4569817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 16932361 - 16932315
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||    
T  16932361 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 16932315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 51015042 - 51015088
Alignment:
Q  240 tgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||| ||||| ||||||||| || |||||    
T  51015042 tgagagttaacttaaaatcagatttctgcagaatcgtggcatgatgg 51015088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 54867795 - 54867745
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| |||||||| || ||| ||||||||||||||    
T  54867795 attggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 9177035 - 9176990
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  9177035 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 9176990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 16934714 - 16934669
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  16934714 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 16934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 36314716 - 36314761
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 36328925 - 36328970
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 11434769 - 11434817
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||||||  ||||| |||||||||  |||||||    
T  11434769 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggtacgatgg 11434817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 22780953 - 22780913
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtg 277  Q
    ||||||||||||||||||||||||  ||||| |||||||||    
T  22780953 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtg 22780913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 24888594 - 24888638
Alignment:
Q  242 agagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  24888594 agagttaacttaaaatcagatttctgcagaattgtggcacgatgg 24888638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 503
Target Start/End: Original strand, 48142825 - 48142857
Alignment:
Q  471 tcgtgacacgatttgggaaaatcgtgacacgat 503  Q
    ||||||||||||||||||||| |||||||||||    
T  48142825 tcgtgacacgatttgggaaaaacgtgacacgat 48142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 503
Target Start/End: Complemental strand, 52083041 - 52083009
Alignment:
Q  471 tcgtgacacgatttgggaaaatcgtgacacgat 503  Q
    ||||||||||||||||||||| |||||||||||    
T  52083041 tcgtgacacgatttgggaaaaacgtgacacgat 52083009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 503
Target Start/End: Complemental strand, 52094048 - 52094016
Alignment:
Q  471 tcgtgacacgatttgggaaaatcgtgacacgat 503  Q
    ||||||||||||||||||||| |||||||||||    
T  52094048 tcgtgacacgatttgggaaaaacgtgacacgat 52094016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 148; Significance: 8e-78; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 359 - 588
Target Start/End: Complemental strand, 3186 - 2958
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| ||||    
T  3186 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggtt 3088  T
Q  458 gca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggac 556  Q
    ||| ||||||||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  3087 gcaggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggac 2989  T
Q  557 ggacgcagatcgtgacacgatttgggaaaatc 588  Q
    ||||||| |||||||||||| |||||||||||    
T  2988 ggacgcaaatcgtgacacga-ttgggaaaatc 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 3e-77; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 12647967 - 12647740
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||| |||||    
T  12647967 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 12647869  T
Q  459 ca-gggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    || ||||||||| ||||| |||||||  || ||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12647868 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 12647770  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||||| |||||||||||    
T  12647769 gacgcaaatcgtgacacga-ttgggaaaatc 12647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 9295862 - 9296079
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||    
T  9295862 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 9295961  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    ||| ||| || ||||| |||||| | || |||||||||||||||   ||||||||||| |||||||||||| ||||||||||||| | ||||||| ||||    
T  9295962 aggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcgga 9296061  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||||||||||    
T  9296062 cgcaaatcgtgacacgat 9296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 14292125 - 14291908
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| ||||    
T  14292125 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgc 14292026  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   ||||||||||||||||||| |  | ||||||||||||| | |||||||  | |    
T  14292025 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgta 14291926  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||||||||||    
T  14291925 cgcaaatcgtgacacgat 14291908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 11098387 - 11098604
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||||||||||||||| ||||    
T  11098387 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgc 11098486  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | |||||||||||||   |||||||  | |    
T  11098487 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgta 11098586  T
Q  560 cgcagatcgtgacacgat 577  Q
    |||| |||||||||||||    
T  11098587 cgcaaatcgtgacacgat 11098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 372 - 557
Target Start/End: Complemental strand, 25410253 - 25410068
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||| | | ||||||||||| || |    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttgcagggtgccaaat 25410154  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||||||||| | || |||||||||||||||  | ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||    
T  25410153 cgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttgtgacg 25410068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 360 - 563
Target Start/End: Original strand, 6266274 - 6266478
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||| |||||| | ||||||||||| | |||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||||  || |||||||||||||||    |||||| |||||||||| ||| | ||||||| |||||||| |||||||||     
T  6266374 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtcgtttcttgggacga 6266473  T
Q  559 acgca 563  Q
    |||||    
T  6266474 acgca 6266478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 562
Target Start/End: Original strand, 32289148 - 32289351
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || || ||||||||| | |   ||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||     
T  32289248 cagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 32289347  T
Q  559 acgc 562  Q
    ||||    
T  32289348 acgc 32289351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 3492377 - 3492179
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||| ||||||||| ||||| ||||||||||||||| | | ||||||||||| | |||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 3492278  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||| | || |||||||||||||||  ||||||||||||||||||| |||   |||||||| |||||| ||||| ||||    
T  3492277 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 3492179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Complemental strand, 4484923 - 4484725
Alignment:
Q  360 tgttgagattgt-cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||  | ||||||||||||| |||    
T  4484923 tgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtttg 4484824  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||| |     ||||||||||||||    ||||||||||||||||| ||  | ||||||||||||||| ||||||||||    
T  4484823 cagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacg 4484725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 360 - 557
Target Start/End: Original strand, 30832921 - 30833119
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||| || ||||  ||||||||||||||||| | ||||||||||| | |||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    |||||||| || |||||||||||| | || |||||||||||||||  | ||||||||||||||||| |||   |||||||| |||||| ||||| ||||    
T  30833021 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacg 30833119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 5377948 - 5377836
Alignment:
Q  240 tgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 339  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  5377948 tgagagttaacttaaaatcagaattctggagaatcgtgctacgatggagaat-ttcgtgtcacgattgttgaagcaaaattctggagcaatcattggaaa 5377850  T
Q  340 aatcgtgccacgat 353  Q
    ||||||||||||||    
T  5377849 aatcgtgccacgat 5377836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 39811477 - 39811693
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |   |||| ||| || ||||    
T  39811477 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgc 39811576  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | ||||||||| ||| | ||||||| | |     
T  39811577 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtc-tgccttggggccgt 39811675  T
Q  560 cgcagatcgtgacacgat 577  Q
     |||||||||||||||||    
T  39811676 tgcagatcgtgacacgat 39811693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 20050555 - 20050469
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  20050555 ttgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgtgccacgattgttgcagcaagattctg 20050469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 30478665 - 30478751
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  30478665 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 30478751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 360 - 581
Target Start/End: Complemental strand, 40739457 - 40739233
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||| |   ||||||||||| | |||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||| | |   ||| ||||||| ||  | ||||||||||||||||| | |   |||||||| |||||| ||||| ||||     
T  40739357 cagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacgt 40739258  T
Q  559 acgca--gatcgtgacacgatttgg 581  Q
    ||| |   |||||||||||||||||    
T  40739257 acgtatcaatcgtgacacgatttgg 40739233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 22713027 - 22712943
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  22713027 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattc 22712943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 22717757 - 22717641
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgg 336  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||| ||||||||||||||||||| ||||  | | ||  |||||    
T  22717757 ttgtgagagttaacttaaaatcagaaatctgaagtatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattcctgggaaactactgg 22717658  T
Q  337 aaaaatcgtgccacgat 353  Q
    |||||||||||||||||    
T  22717657 aaaaatcgtgccacgat 22717641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 27518152 - 27518066
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  27518152 ttgtgagagttaacttaaaatcaaaattctggagaatcgtgccacgatggagaagcatcgcgccacgatttttgaagcaagattctg 27518066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 12781751 - 12781666
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  12781751 tgtgagagttaacttaaaatcagaaatctggataatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctg 12781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 20055300 - 20055215
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||| ||||||    
T  20055300 tgtgagagttaacttaaaatcagaattctggagaatcatgccacgatggagaagcatcgcaccacgattgttgaagcaagattctg 20055215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 17943209 - 17943285
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 313  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17943209 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 17943285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 2740593 - 2740678
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct 322  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| |||||    
T  2740593 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattct 2740678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 35894771 - 35894686
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctg 323  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||||||| ||| ||||||||||||||||||| ||||||    
T  35894771 tgtgagagttaacttaaaatcagaattctggagaattgtactacgatggagaagcatcgcgccacgattgttgaagcaagattctg 35894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 38190648 - 38190765
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactg 335  Q
    ||||||||||||| |||||||||| | | ||||||| |||||||||||||||||||  |||||||||||||||||| ||| || ||| ||||| ||||||    
T  38190648 ttgtgagagttaatttaaaatcaggaatatggagaaacgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactg 38190747  T
Q  336 gaaaaatcgtgccacgat 353  Q
    ||||| ||||||||||||    
T  38190748 gaaaattcgtgccacgat 38190765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 44310471 - 44310548
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc 437  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  44310471 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 2735857 - 2735941
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  2735857 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 2735941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 32247352 - 32247276
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattt 436  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32247352 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 39686635 - 39686719
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  39686635 ttgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 39686719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 33674936 - 33674821
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||| |||||||||||||||| || ||||  | | |   ||||||    
T  33674936 tgtgagagttaacttaaaatcagaaatctagagaatcgtgccacgatggagaagtatcgcgccacgattgttgaagtaagattcctgggaagctactgga 33674837  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||||||||||||||    
T  33674836 aaaatcgtgccacgat 33674821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 39679698 - 39679781
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  39679698 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 39679781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 238 - 353
Target Start/End: Original strand, 45567062 - 45567177
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||  | |||  |||||||    
T  45567062 tgtgagcgttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggcagacactgga 45567161  T
Q  338 aaaatcgtgccacgat 353  Q
    ||  ||||||||||||    
T  45567162 aatttcgtgccacgat 45567177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 45280468 - 45280404
Alignment:
Q  294 tcgtgccacgattgttgaagcaaaattctggagcaatcactggaaaaatcgtgccacgattggat 358  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  45280468 tcgtgccacgattgttgaagcaaaattctggagcaatcactaaaaaaatcgtgccacgattggat 45280404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 17462088 - 17462171
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||| | |||||||| ||||    
T  17462088 tgtgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccacgatggatgaagcaagattc 17462171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 237 - 353
Target Start/End: Complemental strand, 37171284 - 37171167
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaa-tcactg 335  Q
    ||||||||||||||||||||| || | ||||||||| |||||||||||||||||||  ||||||| |||||||||| ||| || ||| ||||| ||| ||    
T  37171284 ttgtgagagttaacttaaaataaggaatctggagaaacgtgccacgatggagaagcaacgtgccatgattgttgaaacaagatcctgaagcaagtcattg 37171185  T
Q  336 gaaaaatcgtgccacgat 353  Q
     |||| ||||||||||||    
T  37171184 aaaaattcgtgccacgat 37171167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 45280503 - 45280457
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  45280503 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 45280457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 17932328 - 17932373
Alignment:
Q  239 gtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  17932328 gtgagagttaacttaaaatcagaaatctgaagaatcgtgccacgat 17932373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 36757425 - 36757477
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  36757425 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 28258682 - 28258729
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  28258682 cttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 33528105 - 33528155
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  33528105 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 39483493 - 39483443
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 411
Target Start/End: Complemental strand, 20522838 - 20522794
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 411  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  20522838 attggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 27104514 - 27104561
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgat 284  Q
    |||| |||||||||||||||||||| ||||| ||||||||| ||||||    
T  27104514 ttgtaagagttaacttaaaatcagatttctgcagaatcgtggcacgat 27104561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||| || |||| ||||||||||| ||||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 524
Target Start/End: Original strand, 28258713 - 28258815
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||| |   ||||||||||| | ||||||||||  || ||||| ||| |||| |  |||||||||||||||  | ||||||||| ||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggtta 28258812  T
Q  522 agt 524  Q
    |||    
T  28258813 agt 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 19502551 - 19502502
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||||| |||||||||||||||||  ||||| ||||||||| ||||||||    
T  19502551 ttgtgatagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 19502502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 45332675 - 45332630
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacga 283  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||    
T  45332675 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacga 45332630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 503
Target Start/End: Complemental strand, 2334801 - 2334769
Alignment:
Q  471 tcgtgacacgatttgggaaaatcgtgacacgat 503  Q
    ||||||||||||||||||||| |||||||||||    
T  2334801 tcgtgacacgatttgggaaaaacgtgacacgat 2334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 360 - 588
Target Start/End: Complemental strand, 4310 - 4083
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  || |||||||||||||| |||    
T  4310 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttagg-tgccgtgagctagggttg 4212  T
Q  459 caggg-tgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||| ||||||| |||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4211 caggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 4113  T
Q  558 gacgcagatcgtgacacgatttgggaaaatc 588  Q
    |||||| |||||||||| | |||||||||||    
T  4112 gacgcaaatcgtgacac-aattgggaaaatc 4083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 112; Significance: 3e-56; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 9308 - 9087
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||| |||||||| |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||     
T  9208 cagggtgccaaatcgtgacatgatttggg-aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 9110  T
Q  559 acgca--gatcgtgacacgattt 579  Q
    |||||   |||||||||||||||    
T  9109 acgcaccaatcgtgacacgattt 9087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 360 - 577
Target Start/End: Complemental strand, 11753 - 11534
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||  | ||||||||||| | |||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 11654  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || ||||||||||||||||| |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||||| ||||||||||     
T  11653 cagggtgccaaatcgtgacacgatttggg-aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgt 11555  T
Q  559 acgca--gatcgtgacacgat 577  Q
    |||||   |||||||||||||    
T  11554 acgcaccaatcgtgacacgat 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 360 - 579
Target Start/End: Original strand, 17431 - 17653
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| | |||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 17530  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgg 558  Q
    |||||||| || |||||||||||| | || ||||||||||| |||  | ||||||||||||||||||||||| ||||||| ||||||| ||||| ||||     
T  17531 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttgtgacgt 17630  T
Q  559 acg--cagatcgtgacacgattt 579  Q
    |||  |  |||||||||||||||    
T  17631 acgttccaatcgtgacacgattt 17653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 353
Target Start/End: Complemental strand, 1349 - 1234
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1349 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcattgga 1250  T
Q  338 aaaatcgtgccacgat 353  Q
    ||||| ||||||||||    
T  1249 aaaattgtgccacgat 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 373 - 579
Target Start/End: Original strand, 21953 - 22161
Alignment:
Q  373 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattc 472  Q
    |||||||||||||||||||||||||| ||||||| |||| || ||||| ||||||||||||||||| ||||||||||||||| |||||||  || || ||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatc 22052  T
Q  473 gtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacg--cagatcgtg 570  Q
    |||||||||| | || ||||||||||||||| || ||||||||||||||||||||  | |||||||| |||||| ||||| |||| |||  |  ||||||    
T  22053 gtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttgtgacgtacgtaccaatcgtg 22152  T
Q  571 acacgattt 579  Q
    |||||||||    
T  22153 acacgattt 22161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 355
Target Start/End: Complemental strand, 42022 - 41906
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactgga 337  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||    
T  42022 tgtgagagttaacttaaaatcagaattctgaagaatcgtgccacgatggagaagcttcgtgccacgattgttggagcaaagttctgg-gcaaacactgga 41924  T
Q  338 aaaatcgtgccacgattg 355  Q
    ||||||||||||||||||    
T  41923 aaaatcgtgccacgattg 41906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 360 - 588
Target Start/End: Original strand, 3337 - 3564
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||  ||||||||||||||||  |  |||||||||||| |||     
T  3337 tgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttga 3436  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    |||  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| |||   ||| ||||| |     
T  3437 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtc-aacctggggaccgt 3535  T
Q  560 cgcagatcgtgacacgatttgggaaaatc 588  Q
     ||||||||||||||||| | ||||||||    
T  3536 tgcagatcgtgacacgatctaggaaaatc 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 360 - 544
Target Start/End: Complemental strand, 945 - 761
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 458  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| || | ||||||||||| | || |||    
T  945 tgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 847  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    | || |||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  846 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 577
Target Start/End: Original strand, 34554 - 34770
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 459  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||  |  ||||| || | | ||||    
T  34554 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttgc 34653  T
Q  460 agggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacgga 559  Q
    | |  || || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| ||| | ||||||| | |     
T  34654 atgacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgt 34752  T
Q  560 cgcagatcgtgacacgat 577  Q
     |||||||||||||||||    
T  34753 tgcagatcgtgacacgat 34770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 1107 - 1192
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattct 322  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  1107 ttgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattct 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 357 - 484
Target Start/End: Original strand, 7908 - 8036
Alignment:
Q  357 atgtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg 455  Q
    ||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||| | |     
T  7908 atgtgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggt 8007  T
Q  456 ttgcagggtgcaaattcgtgacacgattt 484  Q
    ||||||||||| || ||||||||||||||    
T  8008 ttgcagggtgccaaatcgtgacacgattt 8036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 15976 - 16054
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15976 tgtgagagttaacttaaaatcagaaatctggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaa 16054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 400 - 557
Target Start/End: Original strand, 523 - 680
Alignment:
Q  400 gaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgaca 499  Q
    ||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||| ||||||||||| || |||||||||||| | |   ||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgaca 622  T
Q  500 cgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacg 557  Q
    ||||  | ||| ||||||||||||| |||   ||| ||||||||||| ||||| ||||    
T  623 cgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacg 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 66; Significance: 7e-29; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 360 - 524
Target Start/End: Original strand, 132752 - 132917
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 458  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| | | || |||||||| | |||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  459 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||| |||  || |||||||||||||| |   |||||||||| |||  | ||||||||| |||||||    
T  132852 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 224510 - 224576
Alignment:
Q  255 aatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||| ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  224510 aatcagaaatctggagtatcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattc 224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 6302 - 6252
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6302 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 3110 - 3060
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||||||||    
T  3110 attggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 417
Target Start/End: Complemental strand, 149658 - 149601
Alignment:
Q  360 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  149658 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 358 - 435
Target Start/End: Original strand, 1707 - 1784
Alignment:
Q  358 tgtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatt 435  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1707 tgtgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 17497 - 17413
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattc 321  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||    
T  17497 ttgtgagagttaacttaaaatcagaaatctggagtatcgtgccacgatagagaagcatcgcgccacgattgttgaagcaagattc 17413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 188753 - 188675
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaa 316  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  188753 tgtgagagttaacttaaaattagaaatctggagaatcgtgctacgatggagaagcatcgcgccacgattgttgaagcaa 188675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 30795 - 30908
Alignment:
Q  240 tgagagttaacttaaaatcagaattctggagaatcgtgccacgatggagaagcttcgtgccacgattgttgaagcaaaattctggagcaatcactggaaa 339  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||| ||| |||||||||| ||||  | | |   ||||||||    
T  30795 tgagagttaacttaaaatcagaaatctggagcatcgtgccacgatggagaagcatcgcgccaggatggttgaagcaagattcctgggaagctactggaaa 30894  T
Q  340 aatcgtgccacgat 353  Q
    ||||||||||||||    
T  30895 aatcgtgccacgat 30908  T

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Target: scaffold0510 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 372 - 524
Target Start/End: Original strand, 1096 - 1248
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    ||||||||||||||| || ||||||||  |||||||||||||||||||| ||||||||||||||| |   |  |||||| | | ||||||||||  || |    
T  1096 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaat 1195  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||||  ||||||| |  |||||||||||||||  | ||||||||| |||||||    
T  1196 cgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

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Target: scaffold0665 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 540
Target Start/End: Complemental strand, 8230 - 8112
Alignment:
Q  422 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 521  Q
    ||||||||||||||||  |  |||||||||||| |||||||  || || ||||| |||||| | ||||||||||||||||||   |||||||||||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 8131  T
Q  522 agtatccttaataaggact 540  Q
    ||||||  | |||||||||    
T  8130 agtatcactgataaggact 8112  T

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Target: scaffold0665; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 417
Target Start/End: Complemental strand, 8274 - 8216
Alignment:
Q  359 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 417  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8274 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

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Target: scaffold0087 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 524
Target Start/End: Original strand, 43447 - 43599
Alignment:
Q  372 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaatt 471  Q
    |||||||||| |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||| |   || |||||||| | || |||||||  || |    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtttacagggtgtcaaat 43546  T
Q  472 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 524  Q
    ||||  ||||||| |  ||||||||||| |||  | ||||||||| |||||||    
T  43547 cgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagt 43599  T

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Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 36332 - 36384
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  36332 attggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

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Target: scaffold0259 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 1746 - 1955
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 464  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  1746 attgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 1843  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||||||||| |  ||||    
T  1844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcag 1942  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  1943 atcgtgacacgat 1955  T

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Target: scaffold0028 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 148451 - 148660
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 464  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  148451 attgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 148548  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||| ||  | |||||||||||||   ||||||||| |  ||||    
T  148549 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcag 148647  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  148648 atcgtgacacgat 148660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 544
Target Start/End: Original strand, 13791 - 13968
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 465  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  13791 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 13889  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  13890 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 13968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 577
Target Start/End: Original strand, 18671 - 18880
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 464  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| | |||||| |  |||||||||||||  ||| | | | |||||||| ||| || ||      
T  18671 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagaggcagtgagctaagtttgctggaa 18768  T
Q  465 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtcgttccttgggacggacgcag 564  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||| ||||||||  |||| ||||| |  |||     
T  18769 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtc-atcctggggaccgttgcaa 18867  T
Q  565 atcgtgacacgat 577  Q
    |||||||||||||    
T  18868 atcgtgacacgat 18880  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 544
Target Start/End: Original strand, 176457 - 176634
Alignment:
Q  367 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 465  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  176457 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 176555  T
Q  466 caaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttaataaggactggtc 544  Q
    |||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  | |||||||||||||    
T  176556 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 176634  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 419
Target Start/End: Complemental strand, 45804 - 45744
Alignment:
Q  360 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 419  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 28940 - 28989
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  28940 ttgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatgg 28989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 69834 - 69785
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||| |||||||||||||||||||| ||||| ||||||||| ||||||||    
T  69834 ttgtaagagttaacttaaaatcagatttctgcagaatcgtggcacgatgg 69785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 73545 - 73496
Alignment:
Q  237 ttgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatgg 286  Q
    |||| |||||||||||||||||||| || || ||||||||| ||||||||    
T  73545 ttgtaagagttaacttaaaatcagatttatgcagaatcgtggcacgatgg 73496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 120569 - 120609
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgc 278  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  120569 tgtgagagttaacttaaaatcagaaatctggagtatcgtgc 120609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 13054 - 13007
Alignment:
Q  238 tgtgagagttaacttaaaatcagaattctggagaatcgtgccacgatg 285  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||||    
T  13054 tgtgagagttaacttaaaatcaggtttctgcagaatcgtggcacgatg 13007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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