View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_low_80 (Length: 285)
Name: NF16077_low_80
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_low_80 |
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Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18098053 - 18097789
Alignment:
| Q |
1 |
atgcaaatgtgacacaaacaatgattgcactaacaagctttcatgaactataataatataaatccaattgaaaattatagcacatgattttgtacgaact |
100 |
Q |
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| T |
18098053 |
atgcaaatgtgacacaaacaatgattgcactaacaagctttcatgaactataataatataaatccaattgaaaattatagcacatgattttgtacgaact |
18097954 |
T |
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| Q |
101 |
ctatgggggcagctacacacttgtttactcattttaagtcactcacttacaagtgaaaatctttacacttactatgtgatgtaagacaagctatacaatg |
200 |
Q |
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| T |
18097953 |
ctatgggggcagctacacacttgtttactcattttaagtcactcacttacaagtgaaaatctttacacttactatgtgatgtaagacaagctatacaatg |
18097854 |
T |
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| Q |
201 |
aactttattgaggaaatttatcaaacatgtggtatgcgtaaaataggtagaacaataacttgatc |
265 |
Q |
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| T |
18097853 |
aactttattgaggaaatttatcaaacatgtggtatgcgtaaaataggtagaacaataacttgatc |
18097789 |
T |
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