View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_low_82 (Length: 279)
Name: NF16077_low_82
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_low_82 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 35 - 263
Target Start/End: Original strand, 36367873 - 36368102
Alignment:
| Q |
35 |
aaacttaaagttggtagagtgtgtttggtttggtatttaatccaaactcacgtccaattgtgttattgtcgtggtttcatgaagctaataaaactactaa |
134 |
Q |
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| T |
36367873 |
aaacttaaagttggtagagtgtgtttggtttggtatttaatccaaactcacgtccaattgtgttattgtcgtggtttcatgaagctaataaaactactaa |
36367972 |
T |
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| Q |
135 |
acttctacatgaacatgaaaatgttgccgtgaaaacttgcctcagaaccaaacatataccaagttgaaagatatttgaatcaaaagctttcaagtgatg- |
233 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36367973 |
acttctacatgaacatgaaaatgttgccgtgaaaacttgcctcagaaccaaacatataccaagttgaaagatatttgaatcaaaagctttcaagtgatgt |
36368072 |
T |
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| Q |
234 |
tttgcataacataattcaattcccattttt |
263 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
36368073 |
tttgcataacataattcaattcccattttt |
36368102 |
T |
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