View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16078_low_2 (Length: 818)

Name: NF16078_low_2
Description: NF16078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16078_low_2
NF16078_low_2
[»] chr4 (83 HSPs)
chr4 (48-802)||(50426879-50427633)
chr4 (158-301)||(7444348-7444492)
chr4 (158-270)||(35777693-35777805)
chr4 (158-300)||(7852508-7852650)
chr4 (158-270)||(8297871-8297983)
chr4 (158-302)||(45900111-45900255)
chr4 (158-298)||(51834914-51835054)
chr4 (170-305)||(47995696-47995831)
chr4 (170-304)||(37440838-37440972)
chr4 (29-148)||(10733777-10733896)
chr4 (29-148)||(10947546-10947665)
chr4 (29-149)||(6257631-6257751)
chr4 (160-272)||(50341859-50341971)
chr4 (29-148)||(10739764-10739883)
chr4 (29-148)||(10953533-10953652)
chr4 (47-149)||(50168226-50168328)
chr4 (29-149)||(26957230-26957350)
chr4 (29-149)||(48160572-48160692)
chr4 (29-149)||(48166791-48166911)
chr4 (158-313)||(24175350-24175504)
chr4 (168-299)||(37138127-37138258)
chr4 (47-149)||(17627201-17627303)
chr4 (170-272)||(34391699-34391801)
chr4 (158-259)||(27953046-27953146)
chr4 (158-303)||(31174612-31174757)
chr4 (170-297)||(24229613-24229740)
chr4 (179-298)||(31429298-31429417)
chr4 (158-273)||(41462049-41462164)
chr4 (170-256)||(49084408-49084495)
chr4 (51-149)||(26971981-26972079)
chr4 (192-301)||(8261142-8261251)
chr4 (192-301)||(8274559-8274668)
chr4 (407-672)||(10739360-10739617)
chr4 (407-672)||(10953129-10953386)
chr4 (29-120)||(24287600-24287691)
chr4 (158-272)||(20394638-20394750)
chr4 (158-272)||(49400612-49400726)
chr4 (170-267)||(53014203-53014300)
chr4 (407-672)||(24287868-24288125)
chr4 (170-300)||(25115228-25115357)
chr4 (362-670)||(6257228-6257540)
chr4 (170-308)||(13585217-13585351)
chr4 (227-301)||(23605630-23605704)
chr4 (192-299)||(36702818-36702921)
chr4 (515-672)||(10733267-10733417)
chr4 (515-672)||(10947036-10947186)
chr4 (407-640)||(33458320-33458545)
chr4 (47-149)||(35177421-35177527)
chr4 (586-672)||(49976638-49976725)
chr4 (51-149)||(44832041-44832139)
chr4 (49-119)||(49976234-49976304)
chr4 (207-301)||(51291135-51291228)
chr4 (169-298)||(31690394-31690521)
chr4 (167-272)||(42222964-42223069)
chr4 (200-275)||(37060590-37060666)
chr4 (586-677)||(50168644-50168736)
chr4 (597-682)||(3769629-3769715)
chr4 (362-465)||(10733572-10733686)
chr4 (362-465)||(10947341-10947455)
chr4 (242-302)||(11875382-11875441)
chr4 (47-146)||(19686747-19686849)
chr4 (169-268)||(51736365-51736462)
chr4 (362-454)||(26957034-26957138)
chr4 (586-640)||(33461446-33461501)
chr4 (410-465)||(33461612-33461667)
chr4 (586-640)||(48161010-48161065)
chr4 (586-640)||(48167229-48167284)
chr4 (231-277)||(24396259-24396305)
chr4 (512-672)||(26963362-26963513)
chr4 (407-468)||(44831836-44831897)
chr4 (53-117)||(4632012-4632076)
chr4 (242-302)||(7628042-7628102)
chr4 (362-406)||(48160784-48160828)
chr4 (362-406)||(48167003-48167047)
chr4 (170-217)||(23605974-23606021)
chr4 (407-454)||(35177678-35177725)
chr4 (158-253)||(37383766-37383860)
chr4 (158-196)||(8260202-8260240)
chr4 (158-196)||(8273620-8273658)
chr4 (51-93)||(33461797-33461839)
chr4 (362-404)||(50168420-50168461)
chr4 (187-256)||(14031347-14031416)
chr4 (158-251)||(39195740-39195832)
[»] chr7 (66 HSPs)
chr7 (158-302)||(28770477-28770621)
chr7 (158-296)||(27123274-27123412)
chr7 (158-303)||(21727367-21727512)
chr7 (158-306)||(44537341-44537489)
chr7 (29-149)||(22742356-22742476)
chr7 (158-300)||(35496537-35496679)
chr7 (38-149)||(26383291-26383402)
chr7 (407-672)||(351668-351924)
chr7 (51-149)||(5849165-5849263)
chr7 (170-304)||(7653588-7653722)
chr7 (158-312)||(43234790-43234943)
chr7 (158-299)||(28663104-28663244)
chr7 (158-302)||(35731287-35731430)
chr7 (158-298)||(39320948-39321088)
chr7 (29-149)||(3811595-3811715)
chr7 (29-149)||(3817737-3817857)
chr7 (362-672)||(28420980-28421293)
chr7 (29-149)||(35152955-35153075)
chr7 (195-310)||(14651344-14651459)
chr7 (362-640)||(20238775-20239057)
chr7 (29-149)||(338994-339114)
chr7 (29-149)||(351400-351520)
chr7 (29-120)||(28421414-28421505)
chr7 (38-149)||(35148435-35148546)
chr7 (407-670)||(3811192-3811447)
chr7 (407-670)||(3817334-3817589)
chr7 (170-275)||(25886182-25886287)
chr7 (158-270)||(43224081-43224193)
chr7 (59-146)||(26380751-26380838)
chr7 (52-151)||(30219499-30219598)
chr7 (169-298)||(3692888-3693018)
chr7 (170-308)||(9718950-9719084)
chr7 (535-672)||(339379-339509)
chr7 (29-120)||(5979631-5979723)
chr7 (29-148)||(8824424-8824542)
chr7 (182-301)||(10200593-10200711)
chr7 (535-670)||(42767318-42767446)
chr7 (38-117)||(43539617-43539696)
chr7 (171-297)||(35923474-35923596)
chr7 (168-240)||(18801050-18801122)
chr7 (57-133)||(18666928-18667006)
chr7 (512-670)||(26383611-26383762)
chr7 (207-302)||(8920665-8920760)
chr7 (170-301)||(26239504-26239635)
chr7 (170-268)||(32051330-32051426)
chr7 (518-640)||(35148057-35148173)
chr7 (170-273)||(40753938-40754040)
chr7 (241-304)||(47754468-47754531)
chr7 (407-465)||(339261-339319)
chr7 (170-300)||(37158321-37158450)
chr7 (214-270)||(48488172-48488228)
chr7 (193-292)||(34117843-34117942)
chr7 (175-262)||(42936024-42936109)
chr7 (170-237)||(44592878-44592945)
chr7 (407-465)||(15843828-15843886)
chr7 (407-465)||(15860937-15860995)
chr7 (165-251)||(27337704-27337790)
chr7 (207-297)||(36973386-36973476)
chr7 (241-298)||(19559908-19559965)
chr7 (407-456)||(35148238-35148287)
chr7 (308-360)||(43539709-43539762)
chr7 (242-302)||(17157731-17157791)
chr7 (301-360)||(35152903-35152963)
chr7 (535-642)||(5979225-5979325)
chr7 (586-640)||(22741978-22742033)
chr7 (242-301)||(46116899-46116957)
[»] chr5 (70 HSPs)
chr5 (158-302)||(18229564-18229708)
chr5 (158-300)||(30104804-30104946)
chr5 (158-300)||(30501103-30501246)
chr5 (158-300)||(30541446-30541589)
chr5 (29-149)||(30384810-30384930)
chr5 (158-299)||(16667257-16667398)
chr5 (158-310)||(17692262-17692413)
chr5 (29-149)||(41296892-41297012)
chr5 (36-149)||(20499758-20499871)
chr5 (38-149)||(14609753-14609864)
chr5 (161-271)||(9276573-9276683)
chr5 (362-672)||(12686200-12686513)
chr5 (362-672)||(12692302-12692615)
chr5 (158-302)||(34899099-34899242)
chr5 (158-304)||(112446-112592)
chr5 (407-670)||(28525409-28525664)
chr5 (52-149)||(7389974-7390071)
chr5 (29-120)||(12686634-12686725)
chr5 (29-120)||(12692736-12692827)
chr5 (47-149)||(8706813-8706915)
chr5 (51-149)||(28525812-28525910)
chr5 (407-670)||(28531505-28531760)
chr5 (51-149)||(28531908-28532006)
chr5 (158-275)||(7719204-7719321)
chr5 (169-296)||(15720078-15720204)
chr5 (29-120)||(32094677-32094768)
chr5 (407-672)||(30772163-30772422)
chr5 (158-273)||(2918587-2918703)
chr5 (170-270)||(8221134-8221234)
chr5 (158-297)||(5815038-5815177)
chr5 (29-149)||(30771896-30772013)
chr5 (362-586)||(20499963-20500197)
chr5 (170-297)||(3140826-3140953)
chr5 (29-108)||(32097489-32097568)
chr5 (158-251)||(40530448-40530541)
chr5 (213-273)||(7968445-7968505)
chr5 (542-670)||(41297292-41297413)
chr5 (586-672)||(14610200-14610287)
chr5 (49-131)||(19066551-19066634)
chr5 (172-267)||(39558764-39558859)
chr5 (586-670)||(7389571-7389656)
chr5 (53-142)||(26318676-26318765)
chr5 (158-277)||(13480018-13480138)
chr5 (49-148)||(19060200-19060300)
chr5 (512-640)||(32094213-32094333)
chr5 (586-640)||(24054386-24054441)
chr5 (158-272)||(8208179-8208293)
chr5 (407-481)||(14610050-14610124)
chr5 (407-455)||(19066342-19066390)
chr5 (301-360)||(20499863-20499923)
chr5 (158-270)||(23117221-23117332)
chr5 (301-360)||(41297004-41297064)
chr5 (241-304)||(5758644-5758707)
chr5 (362-454)||(7389778-7389882)
chr5 (586-640)||(32097014-32097069)
chr5 (253-300)||(40530125-40530172)
chr5 (158-297)||(41047986-41048125)
chr5 (158-259)||(18963812-18963914)
chr5 (407-471)||(19059985-19060049)
chr5 (362-406)||(41297104-41297148)
chr5 (66-105)||(25408435-25408474)
chr5 (606-672)||(30384399-30384466)
chr5 (242-300)||(31672495-31672553)
chr5 (407-465)||(32094441-32094499)
chr5 (407-465)||(32097242-32097300)
chr5 (362-404)||(32097315-32097357)
chr5 (50-112)||(33021321-33021383)
chr5 (415-465)||(41297172-41297222)
chr5 (586-662)||(16215205-16215282)
chr5 (242-303)||(29342401-29342462)
[»] chr1 (70 HSPs)
chr1 (158-302)||(2864143-2864285)
chr1 (158-297)||(47187789-47187927)
chr1 (158-303)||(38748683-38748827)
chr1 (29-149)||(44409613-44409733)
chr1 (47-149)||(27954792-27954894)
chr1 (29-149)||(31051157-31051277)
chr1 (29-149)||(31057657-31057777)
chr1 (158-298)||(39150582-39150721)
chr1 (158-303)||(43396976-43397123)
chr1 (51-149)||(38152384-38152482)
chr1 (158-299)||(34409734-34409874)
chr1 (49-149)||(33458336-33458436)
chr1 (38-149)||(8093272-8093383)
chr1 (29-120)||(25275502-25275593)
chr1 (29-120)||(25381991-25382082)
chr1 (29-120)||(25387958-25388049)
chr1 (29-120)||(50305810-50305901)
chr1 (362-672)||(25387525-25387839)
chr1 (158-302)||(44829272-44829415)
chr1 (29-112)||(1077857-1077940)
chr1 (158-301)||(7212773-7212910)
chr1 (161-300)||(45640550-45640688)
chr1 (158-273)||(39156261-39156380)
chr1 (407-672)||(34739867-34740124)
chr1 (362-670)||(25381558-25381870)
chr1 (51-149)||(34739621-34739719)
chr1 (158-299)||(4851210-4851350)
chr1 (164-301)||(44329602-44329739)
chr1 (200-304)||(6883088-6883192)
chr1 (169-305)||(14746159-14746295)
chr1 (182-273)||(31889186-31889278)
chr1 (158-302)||(8794416-8794561)
chr1 (47-133)||(4280172-4280258)
chr1 (49-119)||(24927225-24927295)
chr1 (158-300)||(30822741-30822882)
chr1 (158-268)||(32562350-32562459)
chr1 (158-303)||(34232672-34232813)
chr1 (169-246)||(38491232-38491309)
chr1 (158-266)||(48022351-48022459)
chr1 (586-672)||(50306240-50306327)
chr1 (178-295)||(44329484-44329601)
chr1 (362-455)||(1078069-1078174)
chr1 (587-670)||(1078276-1078360)
chr1 (158-262)||(40460725-40460829)
chr1 (168-302)||(3982275-3982408)
chr1 (49-112)||(24964168-24964231)
chr1 (586-640)||(31058095-31058150)
chr1 (407-481)||(8093050-8093124)
chr1 (170-258)||(8365515-8365603)
chr1 (169-297)||(18432920-18433048)
chr1 (158-268)||(39914604-39914711)
chr1 (29-92)||(12184080-12184143)
chr1 (586-640)||(31051595-31051650)
chr1 (170-249)||(52917087-52917165)
chr1 (170-300)||(2994937-2995065)
chr1 (156-213)||(8043878-8043935)
chr1 (158-275)||(42791131-42791248)
chr1 (512-672)||(44409997-44410148)
chr1 (187-251)||(604444-604508)
chr1 (301-360)||(31057769-31057829)
chr1 (590-640)||(27955216-27955267)
chr1 (250-304)||(34046448-34046500)
chr1 (407-466)||(44409882-44409941)
chr1 (362-397)||(50306022-50306057)
chr1 (586-659)||(12183618-12183692)
chr1 (407-465)||(31051426-31051484)
chr1 (535-640)||(8092899-8092997)
chr1 (228-301)||(14758629-14758701)
chr1 (253-310)||(36321580-36321637)
chr1 (261-294)||(39156235-39156268)
[»] chr8 (75 HSPs)
chr8 (158-300)||(42636330-42636472)
chr8 (170-303)||(27801187-27801320)
chr8 (158-310)||(28207624-28207776)
chr8 (159-310)||(1135162-1135313)
chr8 (158-298)||(33013045-33013184)
chr8 (170-301)||(4384099-4384229)
chr8 (51-149)||(42033432-42033530)
chr8 (169-301)||(37427199-37427333)
chr8 (29-149)||(10699642-10699762)
chr8 (29-149)||(39727711-39727831)
chr8 (29-149)||(39735965-39736085)
chr8 (362-670)||(5542183-5542495)
chr8 (47-146)||(14417592-14417691)
chr8 (158-297)||(2258058-2258197)
chr8 (159-298)||(3146037-3146178)
chr8 (158-300)||(33949515-33949656)
chr8 (38-120)||(42993455-42993537)
chr8 (158-302)||(12829835-12829977)
chr8 (362-670)||(32890713-32891025)
chr8 (29-120)||(32896625-32896716)
chr8 (158-299)||(1369824-1369965)
chr8 (51-149)||(10705473-10705571)
chr8 (158-296)||(36355925-36356058)
chr8 (29-149)||(5542587-5542708)
chr8 (29-117)||(36818585-36818673)
chr8 (29-120)||(32890501-32890592)
chr8 (362-670)||(32896837-32897149)
chr8 (47-112)||(9934914-9934979)
chr8 (536-672)||(9935288-9935417)
chr8 (29-149)||(22220154-22220274)
chr8 (171-298)||(24695760-24695886)
chr8 (172-268)||(35901945-35902041)
chr8 (158-302)||(16723169-16723301)
chr8 (164-297)||(12954734-12954867)
chr8 (586-670)||(36819022-36819107)
chr8 (362-640)||(14417766-14418047)
chr8 (38-148)||(1883264-1883375)
chr8 (158-251)||(167857-167950)
chr8 (586-670)||(14799439-14799524)
chr8 (586-670)||(42993027-42993112)
chr8 (158-259)||(37813410-37813509)
chr8 (158-268)||(12684490-12684600)
chr8 (170-274)||(884428-884532)
chr8 (587-670)||(7771284-7771368)
chr8 (165-241)||(17081394-17081470)
chr8 (362-456)||(22219956-22220062)
chr8 (178-250)||(3520822-3520894)
chr8 (234-302)||(26750626-26750694)
chr8 (407-471)||(42033682-42033746)
chr8 (159-251)||(2888729-2888825)
chr8 (610-672)||(39727341-39727404)
chr8 (415-481)||(39735751-39735818)
chr8 (49-116)||(45365390-45365457)
chr8 (407-481)||(42993207-42993281)
chr8 (230-300)||(45197449-45197519)
chr8 (179-304)||(12782798-12782922)
chr8 (39-100)||(17954129-17954190)
chr8 (301-360)||(10699754-10699814)
chr8 (542-586)||(22219817-22219861)
chr8 (241-309)||(32959776-32959844)
chr8 (187-259)||(33067531-33067603)
chr8 (409-465)||(36818855-36818911)
chr8 (301-341)||(39727679-39727719)
chr8 (302-360)||(5542535-5542594)
chr8 (586-632)||(10700080-10700127)
chr8 (160-218)||(2250356-2250414)
chr8 (415-465)||(10699919-10699969)
chr8 (407-465)||(10705719-10705777)
chr8 (174-259)||(2072381-2072465)
chr8 (175-220)||(5588977-5589022)
chr8 (170-259)||(9735309-9735398)
chr8 (407-456)||(9935160-9935209)
chr8 (261-294)||(31264971-31265004)
chr8 (261-294)||(37426393-37426426)
chr8 (415-468)||(39727525-39727578)
[»] chr3 (73 HSPs)
chr3 (362-672)||(10244355-10244669)
chr3 (362-676)||(11839742-11840060)
chr3 (362-672)||(10238233-10238547)
chr3 (29-149)||(10761077-10761197)
chr3 (29-149)||(10769396-10769516)
chr3 (29-149)||(24643917-24644037)
chr3 (38-146)||(53071681-53071789)
chr3 (362-670)||(42191243-42191555)
chr3 (362-670)||(42197185-42197497)
chr3 (407-670)||(49151493-49151748)
chr3 (407-670)||(49157560-49157815)
chr3 (29-149)||(38449490-38449610)
chr3 (29-149)||(11846403-11846524)
chr3 (29-149)||(23138843-23138963)
chr3 (29-149)||(30051527-30051647)
chr3 (29-149)||(38455977-38456097)
chr3 (29-120)||(11840181-11840272)
chr3 (29-120)||(26429873-26429964)
chr3 (29-120)||(42191676-42191767)
chr3 (29-120)||(42197618-42197709)
chr3 (158-300)||(42845974-42846112)
chr3 (158-300)||(12086727-12086869)
chr3 (362-670)||(38455573-38455885)
chr3 (51-149)||(49151247-49151345)
chr3 (51-149)||(49157314-49157412)
chr3 (174-298)||(29083865-29083990)
chr3 (29-149)||(8331400-8331520)
chr3 (362-672)||(8331612-8331925)
chr3 (29-149)||(28964493-28964613)
chr3 (170-302)||(51351289-51351421)
chr3 (29-120)||(10238668-10238759)
chr3 (29-120)||(10244790-10244881)
chr3 (29-120)||(17056247-17056338)
chr3 (29-120)||(55003857-55003948)
chr3 (47-149)||(34300069-34300171)
chr3 (362-670)||(38449086-38449398)
chr3 (407-668)||(17055818-17056071)
chr3 (407-672)||(30051123-30051380)
chr3 (407-670)||(10760673-10760928)
chr3 (158-303)||(48180132-48180277)
chr3 (512-640)||(34300482-34300603)
chr3 (535-670)||(10766894-10767022)
chr3 (47-149)||(12109094-12109195)
chr3 (50-120)||(17601989-17602059)
chr3 (173-297)||(16662992-16663115)
chr3 (158-298)||(24791497-24791638)
chr3 (170-267)||(40673446-40673543)
chr3 (77-149)||(46656341-46656413)
chr3 (585-676)||(48128064-48128156)
chr3 (535-670)||(11846086-11846214)
chr3 (158-272)||(39551848-39551961)
chr3 (29-98)||(9586490-9586559)
chr3 (158-250)||(49362368-49362460)
chr3 (179-273)||(26900014-26900109)
chr3 (586-640)||(28964919-28964974)
chr3 (362-465)||(10769189-10769304)
chr3 (37-149)||(8474561-8474674)
chr3 (362-456)||(26429646-26429752)
chr3 (536-640)||(17593335-17593432)
chr3 (170-250)||(52638173-52638252)
chr3 (227-274)||(26143167-26143214)
chr3 (586-640)||(53069107-53069162)
chr3 (586-672)||(55003433-55003520)
chr3 (407-465)||(13837555-13837613)
chr3 (180-269)||(47638917-47639006)
chr3 (407-586)||(13444939-13445120)
chr3 (229-273)||(41309842-41309886)
chr3 (178-241)||(26143090-26143153)
chr3 (241-300)||(45529084-45529143)
chr3 (179-237)||(45988253-45988310)
chr3 (47-108)||(2982694-2982755)
chr3 (175-220)||(22730530-22730575)
chr3 (301-342)||(24643884-24643925)
[»] chr2 (68 HSPs)
chr2 (158-275)||(19890178-19890295)
chr2 (158-273)||(1334875-1334990)
chr2 (158-273)||(9448945-9449059)
chr2 (29-149)||(35439797-35439917)
chr2 (362-670)||(13455924-13456236)
chr2 (362-670)||(13461865-13462177)
chr2 (29-149)||(28683371-28683491)
chr2 (29-149)||(31001989-31002109)
chr2 (158-298)||(31452313-31452452)
chr2 (362-672)||(35084697-35085014)
chr2 (362-672)||(35090670-35090987)
chr2 (51-149)||(31007989-31008087)
chr2 (51-149)||(35442259-35442357)
chr2 (51-149)||(44717232-44717330)
chr2 (156-301)||(4762347-4762492)
chr2 (29-149)||(30964940-30965060)
chr2 (29-120)||(13455712-13455803)
chr2 (29-120)||(13461653-13461744)
chr2 (158-297)||(15505544-15505683)
chr2 (29-120)||(35085135-35085226)
chr2 (29-120)||(36750027-36750118)
chr2 (47-149)||(19879225-19879327)
chr2 (47-120)||(35091108-35091181)
chr2 (156-273)||(41933129-41933246)
chr2 (29-149)||(13150116-13150236)
chr2 (169-297)||(31017275-31017403)
chr2 (407-672)||(36750296-36750553)
chr2 (158-273)||(34904779-34904894)
chr2 (29-119)||(23283856-23283946)
chr2 (29-148)||(23343176-23343297)
chr2 (170-273)||(19514883-19514986)
chr2 (51-149)||(7771613-7771711)
chr2 (535-672)||(28682966-28683096)
chr2 (176-275)||(29239238-29239336)
chr2 (158-269)||(38533864-38533974)
chr2 (170-268)||(20064923-20065020)
chr2 (170-274)||(9173696-9173801)
chr2 (301-360)||(31651356-31651416)
chr2 (362-632)||(44716866-44717140)
chr2 (586-640)||(13149739-13149794)
chr2 (158-237)||(14295628-14295707)
chr2 (587-672)||(35438730-35438816)
chr2 (535-640)||(31002385-31002483)
chr2 (535-640)||(31008363-31008461)
chr2 (302-360)||(19879320-19879379)
chr2 (586-640)||(30965379-30965434)
chr2 (407-466)||(35438924-35438983)
chr2 (158-269)||(38533341-38533451)
chr2 (407-465)||(13149904-13149962)
chr2 (170-300)||(37993090-37993220)
chr2 (158-267)||(5524461-5524570)
chr2 (242-303)||(21004794-21004855)
chr2 (407-456)||(28683174-28683223)
chr2 (407-464)||(29034702-29034759)
chr2 (222-302)||(3655708-3655788)
chr2 (301-360)||(11048929-11048989)
chr2 (301-360)||(31002101-31002161)
chr2 (241-297)||(35443460-35443516)
chr2 (263-302)||(3882720-3882759)
chr2 (586-672)||(23343612-23343699)
chr2 (536-567)||(30965337-30965368)
chr2 (241-311)||(28453357-28453425)
chr2 (173-250)||(11944888-11944964)
chr2 (407-456)||(19879480-19879529)
chr2 (407-456)||(23343435-23343484)
chr2 (241-302)||(24792072-24792133)
chr2 (88-149)||(29832877-29832938)
chr2 (516-561)||(35438825-35438870)
[»] scaffold0036 (1 HSPs)
scaffold0036 (158-298)||(62491-62631)
[»] chr6 (53 HSPs)
chr6 (362-672)||(8650824-8651138)
chr6 (158-273)||(17215674-17215789)
chr6 (178-302)||(32823697-32823821)
chr6 (169-297)||(7421683-7421811)
chr6 (29-149)||(21770991-21771111)
chr6 (29-149)||(30906007-30906127)
chr6 (158-259)||(1840983-1841084)
chr6 (29-149)||(8651230-8651350)
chr6 (29-120)||(4580777-4580868)
chr6 (29-120)||(25343240-25343331)
chr6 (29-120)||(25353826-25353917)
chr6 (182-272)||(31855078-31855168)
chr6 (29-149)||(21191296-21191417)
chr6 (29-149)||(17581217-17581337)
chr6 (51-149)||(6096945-6097044)
chr6 (416-668)||(21190891-21191135)
chr6 (47-149)||(21197467-21197570)
chr6 (158-297)||(28874399-28874538)
chr6 (47-149)||(21783752-21783854)
chr6 (202-303)||(30801785-30801886)
chr6 (158-297)||(2864878-2865016)
chr6 (174-303)||(5446625-5446752)
chr6 (170-299)||(30739611-30739740)
chr6 (515-672)||(32035307-32035457)
chr6 (586-672)||(8662802-8662889)
chr6 (515-670)||(21782776-21782924)
chr6 (66-149)||(31756645-31756728)
chr6 (170-268)||(2692427-2692524)
chr6 (362-670)||(4580344-4580656)
chr6 (158-271)||(19293446-19293559)
chr6 (362-456)||(21770796-21770900)
chr6 (169-273)||(1479084-1479187)
chr6 (200-303)||(2884129-2884235)
chr6 (158-273)||(9762803-9762918)
chr6 (362-640)||(25354036-25354317)
chr6 (512-672)||(31756236-31756389)
chr6 (158-264)||(3766277-3766383)
chr6 (29-141)||(13007328-13007441)
chr6 (170-273)||(27778766-27778868)
chr6 (586-640)||(25343675-25343730)
chr6 (158-305)||(34231916-34232061)
chr6 (158-300)||(1371130-1371270)
chr6 (158-251)||(26669292-26669385)
chr6 (49-148)||(12801965-12802065)
chr6 (50-149)||(1105947-1106046)
chr6 (512-567)||(17581620-17581675)
chr6 (586-672)||(18778634-18778721)
chr6 (407-465)||(25343506-25343564)
chr6 (407-466)||(21197249-21197308)
chr6 (362-406)||(21783615-21783661)
chr6 (362-406)||(21789838-21789884)
chr6 (158-303)||(9301908-9302053)
chr6 (587-640)||(17581678-17581732)
[»] scaffold0185 (3 HSPs)
scaffold0185 (49-149)||(5600-5700)
scaffold0185 (415-468)||(5834-5887)
scaffold0185 (586-636)||(5974-6025)
[»] scaffold0363 (2 HSPs)
scaffold0363 (47-146)||(1028-1127)
scaffold0363 (362-640)||(672-953)
[»] scaffold1114 (2 HSPs)
scaffold1114 (47-149)||(694-796)
scaffold1114 (304-360)||(791-848)
[»] scaffold0440 (2 HSPs)
scaffold0440 (51-149)||(1614-1712)
scaffold0440 (407-672)||(1215-1472)
[»] scaffold0268 (1 HSPs)
scaffold0268 (182-298)||(20215-20330)
[»] scaffold0012 (3 HSPs)
scaffold0012 (29-149)||(173316-173436)
scaffold0012 (586-672)||(172911-172998)
scaffold0012 (407-481)||(173094-173168)
[»] scaffold0208 (4 HSPs)
scaffold0208 (29-120)||(12008-12099)
scaffold0208 (362-586)||(6347-6582)
scaffold0208 (29-120)||(6135-6226)
scaffold0208 (362-586)||(12220-12455)
[»] scaffold0419 (1 HSPs)
scaffold0419 (158-297)||(1065-1204)
[»] scaffold0064 (1 HSPs)
scaffold0064 (47-149)||(13904-14006)
[»] scaffold0236 (1 HSPs)
scaffold0236 (515-672)||(5523-5673)
[»] scaffold0003 (1 HSPs)
scaffold0003 (158-273)||(103640-103755)
[»] scaffold0004 (1 HSPs)
scaffold0004 (162-246)||(335866-335950)
[»] scaffold0085 (1 HSPs)
scaffold0085 (47-117)||(38059-38129)
[»] scaffold0119 (1 HSPs)
scaffold0119 (158-251)||(1408-1501)
[»] scaffold1444 (2 HSPs)
scaffold1444 (170-246)||(950-1026)
scaffold1444 (182-245)||(1723-1786)


Alignment Details
Target: chr4 (Bit Score: 462; Significance: 0; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 48 - 802
Target Start/End: Original strand, 50426879 - 50427633
Alignment:
Q  48 aataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatta 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||  |||||||||||||||||    
T  50426879 aataataattatattagttatttatcaagtgtgagccttaattgattagtgatcaaattaagtaataaagttattaaattttcaatgagataattaatta 50426978  T
Q  148 aagggttttgtttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  50426979 aagggttttgtttaagcatctcaaatttagtaattattcttttgaaaagtcaactattacaatttccaatgcaatcaacacacaacttttcattaaaaat 50427078  T
Q  248 ttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaatatttaattaattggtatggacccaatgagtgatgtct 347  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  50427079 ttactatttaaagtgtttaaagagtgccacaggggcactcgttaacattttccttaattaaatatttaattaattggtatggatccaatgagtaatgtct 50427178  T
Q  348 agatgacccattagagaggctatggtccccaatacacggtacacggcaaaactctctctaagagaagttgaggcataaatgtaccggttgagtaagaatc 447  Q
     |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50427179 ggatgacccattagagaggctatggtccccagtacaccgtacacggtaaaactctctctaagagaagttgaggcataaatgtaccggttgagtaagaacc 50427278  T
Q  448 aaatcagccatcgctaaccctgttctttgtttcatatatcacctctcc------------gtttatggttgatgaatgttgagagggcttccatgaacac 535  Q
    ||| ||  | ||||||||  |||||||||||||  |||||||||||||            || ||||||||||||||||||||||||||||||||||| |    
T  50427279 aaaccaatcgtcgctaactttgttctttgtttc--atatcacctctccttaatacgacatgtgtatggttgatgaatgttgagagggcttccatgaacgc 50427376  T
Q  536 tttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcatttcaatgttttgtt 635  Q
    | ||| ||||||||||||||||||||||||||  ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  50427377 tatatccaggtattcctaataccctaattcttaatcttcttgataaatcaataaattaaacatgtcgtacatccgatcataatcatttcaatgttttgat 50427476  T
Q  636 tgctttcattgttaattcataattgttaaacatgtttcatgtttttaataagacatgtatttattctctt--aagatttaacgtgttgtatttttagggt 733  Q
    ||||| || | |||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||               
T  50427477 tgcttccactattaattcatagttgctaagcatgtttcatgtttttaataagacctgtatttattctcttaaaagatttaacgtgttgt----------- 50427565  T
Q  734 tggattcaaatcaacaacttttgatttagctgtattgaa--agatcgcttagtgcaaatggcaaaaacttt 802  Q
       ||||||||| ||||||||||||||||||||||||||  |||||  | |||||||||||||||||||||    
T  50427566 ---attcaaatccacaacttttgatttagctgtattgaaagagatctttcagtgcaaatggcaaaaacttt 50427633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 7444492 - 7444348
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaa-gtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattt 256  Q
    |||||||||| |||||||||||||||| ||||| |||| ||| ||||||||||||| ||||||| |||| |||||||||||| |||||||||||  ||||    
T  7444492 tttaagcatcccaaatttagtaattatacttttaaaaaagtcaactattacaattttcaatgcattcaatacacaacttttctttaaaaacttagtattt 7444393  T
Q  257 aaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    |||||| |||||||||||| | || ||||||||||||||||||||    
T  7444392 aaagtgtttaaagagtgtctcgggagcactcgttaacatttccct 7444348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 35777805 - 35777693
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||| |||| |||||||||||||||||||||| ||||||  |||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||    
T  35777805 tttaaccatcccaaatttagtaattattcttttaaaaagttaactattacaatttctaatgcattcaatacacaacttttcattaaaaacttaccattta 35777706  T
Q  258 aagtgcttaaaga 270  Q
    |||||||||||||    
T  35777705 aagtgcttaaaga 35777693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 7852650 - 7852508
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||||||||||||||||| |||| |  ||||||||||||| ||||||| | || ||||||||||||||||||||||||| |||||    
T  7852650 tttaagcatcctaaatttagtaattattcttttaaaaaattaactattacaattttcaatgcatttaatacacaacttttcattaaaaacttactattta 7852551  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    |||||||||||||||| | | | |||||||||||| |||||||    
T  7852550 aagtgcttaaagagtgccccggtggcactcgttaatatttccc 7852508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 8297871 - 8297983
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||| |||| |||||| |||||||||||||||||| |||||    
T  8297871 tttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattcaatacacaatttttcattaaaaacttactattta 8297970  T
Q  258 aagtgcttaaaga 270  Q
    |||||||||||||    
T  8297971 aagtgcttaaaga 8297983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 45900255 - 45900111
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||||||| ||||||||||||  |||||| ||||| ||||||||||||||| |||| ||||||||||||||   |||||||| | |||    
T  45900255 tttaagcatcctaaatttagcaattattcttttataaagtcaactatcacaatttccaatgcattcaatacacaacttttcatatgaaacttactaatta 45900156  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||||||||||||| | | ||||||||||||||||||||||||    
T  45900155 aagtgcttaaagagtgcccccggggcactcgttaacatttccctt 45900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 158 - 298
Target Start/End: Original strand, 51834914 - 51835054
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||||||| |||||||||||| ||||||| ||||||| ||||||||||||| | || |||||||||||||||||||| |||| |||||    
T  51834914 tttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaatttactattta 51835013  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    ||||| |||||||||||| | ||  ||||||||||||||||    
T  51835014 aagtgtttaaagagtgtctcgggaacactcgttaacatttc 51835054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 170 - 305
Target Start/End: Complemental strand, 47995831 - 47995696
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||||||||| |||||| ||||||  | ||||||||||| ||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  47995831 aaatttagtaattactcttttaaaaagttaattattacaattttcaatgcattcaatacataacttttcattaaaaacttacaatttaaagtgcttaaag 47995732  T
Q  270 agtgtcacaggggcactcgttaacatttcccttaat 305  Q
    || ||| ||||| |||| |||||||||| |||||||    
T  47995731 agagtctcagggacacttgttaacattttccttaat 47995696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 170 - 304
Target Start/End: Original strand, 37440838 - 37440972
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||||||||||| |||| ||||||| ||||||||||||| |||||   |||| ||| || ||||||||| ||| |||||||||||||| |||||||    
T  37440838 aaatttagtaattattattttaaaaagtcaactattacaattttcaatgtgttcaatacataatttttcattataaatttaccatttaaagtacttaaag 37440937  T
Q  270 agtgtcacaggggcactcgttaacatttcccttaa 304  Q
    |||||| || |||||||||||||||||||||||||    
T  37440938 agtgtctcaagggcactcgttaacatttcccttaa 37440972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 10733896 - 10733777
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  10733896 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 10733797  T
Q  129 ctaatgagataattaattaa 148  Q
    |||||  |||||||||||||    
T  10733796 ctaattggataattaattaa 10733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 10947665 - 10947546
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  10947665 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 10947566  T
Q  129 ctaatgagataattaattaa 148  Q
    |||||  |||||||||||||    
T  10947565 ctaattggataattaattaa 10947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 6257751 - 6257631
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| || ||||||| ||||    
T  6257751 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaagctattagattt 6257652  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  6257651 ctaattggataattaattaaa 6257631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 50341971 - 50341859
Alignment:
Q  160 taagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaa 259  Q
    |||||||  |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||| ||||||||||||||| |||| |||| || ||||    
T  50341971 taagcattccaaatttagtaattattcttttaaaaagtcaactattacaatttccaacgcattcaatacacaacttttcatttaaaatttactatataaa 50341872  T
Q  260 gtgcttaaagagt 272  Q
    |||||||||||||    
T  50341871 gtgcttaaagagt 50341859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 10739883 - 10739764
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  10739883 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 10739784  T
Q  129 ctaatgagataattaattaa 148  Q
    || ||  |||||||||||||    
T  10739783 ctgattggataattaattaa 10739764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 10953652 - 10953533
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  10953652 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 10953553  T
Q  129 ctaatgagataattaattaa 148  Q
    || ||  |||||||||||||    
T  10953552 ctgattggataattaattaa 10953533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 50168226 - 50168328
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||| | |||| ||||||||||||||||| |||||||||  |||||||||||    
T  50168226 taataataattatattagctatttatcaattgtgagtcttaattgattagtggtcaaatcaagtaacaaggctattagatttctaattggataattaatt 50168325  T
Q  147 aaa 149  Q
    |||    
T  50168326 aaa 50168328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 26957350 - 26957230
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||||||||| ||| |||||| ||||    
T  26957350 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagccttaattaattagtgatcaaattaagtaataagactattagattt 26957251  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  26957250 ctaattggataattaattaaa 26957230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 48160572 - 48160692
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  48160572 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 48160671  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  48160672 ctaattggataattaattaaa 48160692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 48166791 - 48166911
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  48166791 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 48166890  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  48166891 ctaattggataattaattaaa 48166911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 24175504 - 24175350
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||||||| ||||||||| ||||||  |||||||||||||  |||||| | || |||||||||||| |  |||||||||||||||    
T  24175504 tttaagcatcctaaatttagtaaatattctttt-aaaagtaaactattacaattttaaatgcatttaatacacaacttttcgtacaaaacttaccattta 24175406  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaatatt 313  Q
    |||||||||||||||| | |  |||||||  ||||||||||||| || ||||||||    
T  24175405 aagtgcttaaagagtgccccgagggcacttcttaacatttccctaaaataaatatt 24175350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 37138258 - 37138127
Alignment:
Q  168 tcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaa 267  Q
    |||||||||| || ||||||||| ||||||| ||||||| ||||||||||||| |||| |||||||||||||| || ||||| | | ||||| |||||||    
T  37138258 tcaaatttagcaactattcttttaaaaagtcaactattataatttccaatgcactcaatacacaacttttcataaagaactttctaattaaattgcttaa 37138159  T
Q  268 agagtgtcacaggggcactcgttaacatttcc 299  Q
    |||||||| | |  ||||||||||||||||||    
T  37138158 agagtgtcccggaagcactcgttaacatttcc 37138127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 17627303 - 17627201
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||||||||||||||| |||||||| | |||||| || |||||||||||||||||||||||||| ||| |||||| ||||| ||| ||||||||||||    
T  17627303 taataataattatattagctatttatcgattgtgagtctgaattgattagtgattaaattaagtaataagcctattagatttccaattagataattaatt 17627204  T
Q  147 aaa 149  Q
    |||    
T  17627203 aaa 17627201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 34391801 - 34391699
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||||||||||||||||  ||||||   |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| ||||| ||||||    
T  34391801 aaatttagtaattattcttttataaagtcagttattacaatttccaatgcaatcaatacacaactttttattaaaaacttactattttaagtgtttaaag 34391702  T
Q  270 agt 272  Q
    |||    
T  34391701 agt 34391699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 27953146 - 27953046
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||||||||||||||| ||||| |||| ||||||  ||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||    
T  27953146 tttaagcatctcaaatttagta-ttattattttaaaaagttaactattacaattttcaatgcattcaatacacaacttttcgttaaaaacttaccattta 27953048  T
Q  258 aa 259  Q
    ||    
T  27953047 aa 27953046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 31174757 - 31174612
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||| |||||| |||||||||||||| ||||||  ||| ||||||||| ||||  | |||  |||||||||||||||||||| ||| ||||||    
T  31174757 tttaagcatctaaaattttgtaattattcttttaaaaagttaactgttacaattttcaatatattcattacacaacttttcattaaaaatttatcattta 31174658  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    ||||  ||||||| | || |||  ||||||||||||||||||||||    
T  31174657 aagtatttaaagaatatcccagaagcactcgttaacatttccctta 31174612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 24229740 - 24229613
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||||||||||||||||| ||||||  | ||| ||||||| ||||||| | || |||||| ||||||||||||||||   |||||||||||||||||    
T  24229740 aaatttagtaattattctttttaaaagtaaattatcacaattttcaatgcatttaatacacaatttttcattaaaaactttttatttaaagtgcttaaag 24229641  T
Q  270 agtgtcacaggggcactcgttaacattt 297  Q
    |||||| | || |||| |||||||||||    
T  24229640 agtgtctcgggagcacccgttaacattt 24229613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 31429298 - 31429417
Alignment:
Q  179 aattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcaca 278  Q
    |||||||||||| |||| || ||||||||||||||||||||| |||| ||||||||||||||| ||||||||| | |||||||||||||| | |||||      
T  31429298 aattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttcatttaaaacttactaattaaagtgcttaaaaaatgtcatg 31429397  T
Q  279 ggggcactcgttaacatttc 298  Q
    |  ||||||| |||||||||    
T  31429398 gaagcactcgataacatttc 31429417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 41462049 - 41462164
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | | ||||||||||||||||||| ||||||| ||||||||||||||  ||||| | || ||| || |||||||||||||||||| |||||    
T  41462049 tttaagcattttatatttagtaattattcttttaaaaagtcaactattacaatttcttatgcatttaatacataatttttcattaaaaacttactattta 41462148  T
Q  258 aagtgcttaaagagtg 273  Q
    || |||||||||||||    
T  41462149 aaatgcttaaagagtg 41462164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 49084495 - 49084408
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaa-tcaacacacaacttttcattaaaaacttaccattt 256  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||    
T  49084495 aaatttagtaattattcttttaaaaagtcaactattacaattttcaatgaaattcaatacacaacttttcattaaaaacttaccattt 49084408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 26972079 - 26971981
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||| | |||| ||||| |||||||||  ||||||||||||||    
T  26972079 aataattatattagctatttatcaattgtgagtcttaattgattagtgatcaaattaagtgataaggatattagatttctaattggataattaattaaa 26971981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 8261142 - 8261251
Alignment:
Q  192 aaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgtta 291  Q
    ||||||| ||| ||||||||| ||||||| | || ||| ||||||||||||||||||||| ||||||||||||| ||||||| | ||| | |||||||||    
T  8261142 aaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgcttgaagagtgccccagagacactcgtta 8261241  T
Q  292 acatttccct 301  Q
    ||||||||||    
T  8261242 acatttccct 8261251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 8274559 - 8274668
Alignment:
Q  192 aaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgtta 291  Q
    ||||||| ||| ||||||||| ||||||| | || ||| ||||||||||||||||||||| ||||||||||||| ||||||| | ||| | |||||||||    
T  8274559 aaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtgcttgaagagtgccccagagacactcgtta 8274658  T
Q  292 acatttccct 301  Q
    ||||||||||    
T  8274659 acatttccct 8274668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 672
Target Start/End: Complemental strand, 10739617 - 10739360
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  10739617 aagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcaaatcatctcctctctttggttatcg 10739518  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||   ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  10739517 ttgttga----tgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 10739430  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | |||||||||||||||| |||||||||||||||||||    | || ||||||||||||| |||||||||    
T  10739429 agatccgatcataatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttt 10739360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 672
Target Start/End: Complemental strand, 10953386 - 10953129
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  10953386 aagagaatttgaggcataaaggtatcggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcaaatcatctcctctctttggttatcg 10953287  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||   ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  10953286 ttgttga----tgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 10953199  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | |||||||||||||||| |||||||||||||||||||    | || ||||||||||||| |||||||||    
T  10953198 agatccgatcataatcatgttcaatgttttgtttgcttctgctattgattcataattgttgaacatgttt 10953129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 24287600 - 24287691
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||||| |||||||    
T  24287600 ttatgtgggcaaatatcgtaataataattatattagctatttataaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 24287691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 20394638 - 20394750
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||| || |||| ||| |  |||||||||||||||| |||||||    
T  20394638 tttaagcatcccaaatttagtaattattcttttaaaaagtgaactattacaatttccaatacattcaataca-acattttcattaaaaactt-ccattta 20394735  T
Q  258 aagtgcttaaagagt 272  Q
    || || |||||||||    
T  20394736 aaatgtttaaagagt 20394750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 49400612 - 49400726
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||||||||||||||||| |||| || ||||||||||||||||||| | | || |||| ||||||||||||||  ||   |||||    
T  49400612 tttaagcatcctaaatttagtaattattcttttaaaaaatcaactattacaatttccaatgtatttaatacacgacttttcattaaaattttgttattta 49400711  T
Q  258 aagtgcttaaagagt 272  Q
    |||||||||||||||    
T  49400712 aagtgcttaaagagt 49400726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 53014300 - 53014203
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaa 267  Q
    |||||||||||||||  |||| |||| |  |||||||||||||||||| || |||| ||||||||||| ||||||||| |||||||||||||||||||    
T  53014300 aaatttagtaattatctttttaaaaaattaactattacaatttccaatacattcaatacacaactttttattaaaaacataccatttaaagtgcttaa 53014203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 407 - 672
Target Start/End: Original strand, 24287868 - 24288125
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  24287868 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcg 24287967  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| ||| |    |||||||| | |||||   ||||| ||||||||||||||||||||||||||  |  ||||||||||||||        | |||||||    
T  24287968 ttgttgatt----agagggctgctatgaaagttttatccaggtattcctaataccctaattcttaataaccttgataaatcaa--------acatgtcgt 24288055  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | || ||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  24288056 agatacgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 24288125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 25115357 - 25115228
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgctt-aaa 268  Q
    |||||||||||||||| |||| ||||||  ||||||||||||||||||||| | || ||||||||||| | ||||||||||| |||||||||| || |||    
T  25115357 aaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaacttttta-taaaaacttactatttaaagtgtttaaaa 25115259  T
Q  269 gagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||| | | ||| ||| ||||||||||||||    
T  25115258 gagtg-cccggggacacacgttaacatttccc 25115228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 6257540 - 6257228
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  6257540 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 6257441  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| |||| |  |  |||| |||| |||    |||||||||| | | |||  |||||| |||||    
T  6257440 atcagccgccgctaactctattgtgtgtttcagatcatctcctcactttggttatcgttgttga----tgagagggctgctacgaaagctttatccaggt 6257345  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||    |||||||||||||||        | |||| ||| |||||||||||||||| ||||||||||||||||||| |  |    
T  6257344 attcctaatatcctaattcttaacatccttgataaatcaa--------acatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 6257253  T
Q  646 gttaattcataattgttaaacatgt 670  Q
    ||| ||| || |||||| |||||||    
T  6257252 gttgatttatgattgttgaacatgt 6257228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 13585351 - 13585217
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||| ||||||| |||||||||    ||| ||||||||| ||||| | |||  ||| ||||||||||  |||||||||||||||||||||||||||    
T  13585351 aaatttagaaattattattttcaaaa----actgttacaattttcaatgtattcattacataacttttcatataaaacttaccatttaaagtgcttaaag 13585256  T
Q  270 agtgtcacaggggcactcgttaacatttccc-ttaattaa 308  Q
    ||||||  | || |||||||||||||||||| ||||||||    
T  13585255 agtgtctga-ggacactcgttaacatttcccattaattaa 13585217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 23605704 - 23605630
Alignment:
Q  227 acacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| || | | | |||||||||||||||||||    
T  23605704 acacaacttttcattaaaaacttaccatttaaagtgcttaaaaagtatcccggagacactcgttaacatttccct 23605630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 192 - 299
Target Start/End: Original strand, 36702818 - 36702921
Alignment:
Q  192 aaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgtta 291  Q
    ||||||| | ||||||||||| ||||||| |||| |||||| |||||||||||||||||    ||||||||||||||||||||| | | || ||||||||    
T  36702818 aaaagtcaattattacaattttcaatgcattcaatacacaatttttcattaaaaactta----ttaaagtgcttaaagagtgtcccggaggaactcgtta 36702913  T
Q  292 acatttcc 299  Q
    ||||||||    
T  36702914 acatttcc 36702921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 515 - 672
Target Start/End: Complemental strand, 10733417 - 10733267
Alignment:
Q  515 tgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatca 614  Q
    |||||||||| || ||||   ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||    
T  10733417 tgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatca 10733326  T
Q  615 taatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||| ||||||||||| ||||||| |  | || ||||||||||||| |||||||||    
T  10733325 taatcatgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttt 10733267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 515 - 672
Target Start/End: Complemental strand, 10947186 - 10947036
Alignment:
Q  515 tgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatca 614  Q
    |||||||||| || ||||   ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||    
T  10947186 tgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatca 10947095  T
Q  615 taatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||| ||||||||||| ||||||| |  | || ||||||||||||| |||||||||    
T  10947094 taatcatgttcaatgttttatttgcttccgctattgattcataattgttgaacatgttt 10947036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 407 - 640
Target Start/End: Complemental strand, 33458545 - 33458320
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatata---tcacctctccgtttatgg 503  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||  ||||||| || || | ||||||| ||    ||| ||||  | |||| |    
T  33458545 aagagaacttgaggcataaaggtatcggttgagaaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcg 33458446  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| | | |||  |||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  33458445 ttgttga----tgagagggctgctaagaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 33458358  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    | |||||||||||||||| |||||| ||||||||||||    
T  33458357 agatccgatcataatcatgttcaatattttgtttgctt 33458320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 35177421 - 35177527
Alignment:
Q  47 taataataattatattagttatttatcaagtgtga----gccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataatt 142  Q
    |||||||||||||||||| |||||||||| | |||    || |||||||||||||||| ||||||||||| |||||| |||  |||||||| ||||||||    
T  35177421 taataataattatattagatatttatcaattatgaacgagcattaattgattagtgatcaaattaagtaataaggctgttagttttctaattagataatt 35177520  T
Q  143 aattaaa 149  Q
    | |||||    
T  35177521 atttaaa 35177527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 586 - 672
Target Start/End: Original strand, 49976638 - 49976725
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||  | |  ||||||||||||| || ||||||    
T  49976638 ataaatcaaacatgtcgtagatccgatcataatcatattcaatgttttgtttgctttcgctatcgattcataattgttgaatatgttt 49976725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 44832139 - 44832041
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||||||||||||||||||||| | |    |||| |||||||||||| ||||||||||| |||| ||| | |||| |||| |||||||||||||||    
T  44832139 aataattatattagttatttatcaattatagatcttagttgattagtgatcaaattaagtaataaggttataagatttttaattagataattaattaaa 44832041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 49976234 - 49976304
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct 119  Q
    |||||||||||||||| ||||||| || |  ||||||||||||||||||||| ||||||||||| ||||||    
T  49976234 ataataattatattagctatttattaatttggagccttaattgattagtgatcaaattaagtaataaggct 49976304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 51291135 - 51291228
Alignment:
Q  207 caatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    |||||||||||||||| ||  |||||  |||||| |||| |||||||||| | |||||||||||||| | | |||||||||||||||||||||||    
T  51291135 caatttccaatgcaataaatgcacaaactttcat-aaaatcttaccattttaggtgcttaaagagtgcccccggggcactcgttaacatttccct 51291228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 298
Target Start/End: Original strand, 31690394 - 31690521
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||| |||||||| |||  ||||||| ||| || |||||| ||||||| | || |||||||||||||| | ||| |||| |||||||||| ||||     
T  31690394 caaatttattaattattattta-aaaagtcaactgttgcaattttcaatgcattgaatacacaacttttcataagaaatttactatttaaagtgtttaag 31690492  T
Q  269 gagtgtcacaggggcactcgttaacatttc 298  Q
    ||||||| |  |||||||||||||||||||    
T  31690493 gagtgtc-cgagggcactcgttaacatttc 31690521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 272
Target Start/End: Original strand, 42222964 - 42223069
Alignment:
Q  167 ctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgctta 266  Q
    |||||||||||||| ||||  ||| ||||  | ||||||| ||||| ||||||| |||| |||||| |||| ||||||||||||||| || |||| ||||    
T  42222964 ctcaaatttagtaactatttatttaaaaaaccaactattataattttcaatgcattcaatacacaattttttattaaaaacttaccactttaagtactta 42223063  T
Q  267 aagagt 272  Q
    ||||||    
T  42223064 aagagt 42223069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 37060590 - 37060666
Alignment:
Q  200 actattacaatttccaatgcaatcaacacacaactttt-cattaaaaacttaccatttaaagtgcttaaagagtgtc 275  Q
    ||||||| ||||| ||||||||| || ||| || |||| ||||||||||||||||||||||||||||||| ||||||    
T  37060590 actattataattttcaatgcaattaatacataattttttcattaaaaacttaccatttaaagtgcttaaaaagtgtc 37060666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 586 - 677
Target Start/End: Original strand, 50168644 - 50168736
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgtttcatgt 677  Q
    |||||||||| |||||||| || ||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| ||| ||||| ||||    
T  50168644 ataaatcaaacatgtcgtatattcgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacgtgttttatgt 50168736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 682
Target Start/End: Original strand, 3769629 - 3769715
Alignment:
Q  597 atgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgtttcatgttttta 682  Q
    |||||||| |||||||||||||||| |||||||||||||||||||  ||| || |||||||||| || ||||| ||| ||| |||||    
T  3769629 atgtcgtagatccgatcataatcatgttcaatgttttgtttgcttaaattattgattcataattattgaacatattttatgatttta 3769715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 10733686 - 10733572
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| ||| |||||||| ||||| |||    
T  10733686 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaa 10733588  T
Q  450 atcagccatcgctaac 465  Q
    ||||||| ||||||||    
T  10733587 atcagccgtcgctaac 10733572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 10947455 - 10947341
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| ||| |||||||| ||||| |||    
T  10947455 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaatttgaggcataaaggtatcggttgaggaagaaccaa 10947357  T
Q  450 atcagccatcgctaac 465  Q
    ||||||| ||||||||    
T  10947356 atcagccgtcgctaac 10947341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 11875441 - 11875382
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  11875441 aaaaaattaccatttaaagt-cttaaagagtgtctcagggacactcgttaacattttcctt 11875382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 19686849 - 19686747
Alignment:
Q  47 taataataattatat---tagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataatta 143  Q
    |||||||||||||||   ||| |||||||| | |||| | ||||||||||||||||| ||||||| ||| ||| || |||||||| |||| | |||||||    
T  19686849 taataataattatataattagctatttatcgattgtgtgtcttaattgattagtgatcaaattaaataataagactgttaaatttataataaaataatta 19686750  T
Q  144 att 146  Q
    |||    
T  19686749 att 19686747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 51736365 - 51736462
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||||| |||| || | || ||||||||||| |  ||||||||| |||||  ||||||||||    
T  51736365 caaatttagcaattattcttttaaaaagtcaactattataattttcaatacattgaatacacaacttttaa--aaaaacttatcatttggagtgcttaaa 51736462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 26957138 - 26957034
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  26957138 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 26957039  T
Q  450 atcag 454  Q
    |||||    
T  26957038 atcag 26957034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 33461501 - 33461446
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||| ||||||||| |||||||||||||||||||    
T  33461501 ataaatcaaacatgtcgtaaatccgaccataatcatgttcaatgttttgtttgctt 33461446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 410 - 465
Target Start/End: Complemental strand, 33461667 - 33461612
Alignment:
Q  410 agaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  33461667 agaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaac 33461612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 48161010 - 48161065
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| ||||||||||||| || |||||||||||||||||||    
T  48161010 ataaatcaaacatgtcgtagatccgatcataattatgttcaatgttttgtttgctt 48161065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 48167229 - 48167284
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| ||||||||||||| || |||||||||||||||||||    
T  48167229 ataaatcaaacatgtcgtagatccgatcataattatgttcaatgttttgtttgctt 48167284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 24396259 - 24396305
Alignment:
Q  231 aacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcac 277  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||    
T  24396259 aacttttcatataaaacttaccatttaaagtacttaaagagtgtcac 24396305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 672
Target Start/End: Complemental strand, 26963513 - 26963362
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccga 611  Q
    ||||||||||||| |||| ||  |||||| ||||||||||||||||  ||||||||  | |||||||||||||||        | |||||||| |||||     
T  26963513 tgttgagagggctaccataaaagctttatccaggtattcctaatac--taattcttgatatccttgataaatcaa--------acatgtcgtagatccgt 26963424  T
Q  612 tcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||| | || ||||||||||||||||||| |  | || ||||||||| ||| |||||||||    
T  26963423 tcatacttatgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttt 26963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 468
Target Start/End: Complemental strand, 44831897 - 44831836
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccct 468  Q
    ||||||| ||||||||||||  ||||||||||| ||||| || ||||||| |||||||||||    
T  44831897 aagagaacttgaggcataaaaataccggttgaggaagaaccacatcagccgtcgctaaccct 44831836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 4632012 - 4632076
Alignment:
Q  53 taattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaagg 117  Q
    ||||||||||||||||||||||| |   || |||||||||||||| || ||||||||||| ||||    
T  4632012 taattatattagttatttatcaatttgaagtcttaattgattagtaatcaaattaagtaataagg 4632076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 7628042 - 7628102
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||| ||||| |||||||  ||||||||||| | | ||||||||||||||||||||||||    
T  7628042 aaaaagttaccttttaaaggtcttaaagagtgccccgggggcactcgttaacatttccctt 7628102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 48160784 - 48160828
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct 406  Q
    |||||||||||||||||||| || ||||||||||| |||||||||    
T  48160784 agaggctatggtccccaatataccgtacacggcaatactctctct 48160828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 48167003 - 48167047
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct 406  Q
    |||||||||||||||||||| || ||||||||||| |||||||||    
T  48167003 agaggctatggtccccaatataccgtacacggcaatactctctct 48167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 23606021 - 23605974
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaat 217  Q
    ||||||||||||||||||||| ||||||  | ||||||||||||||||    
T  23606021 aaatttagtaattattcttttaaaaagttaattattacaatttccaat 23605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 35177678 - 35177725
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcag 454  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||||    
T  35177678 aagagaacttgaggcataaatgtatcggttgagaaataatcaaatcag 35177725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 37383860 - 37383766
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttacca 253  Q
    ||||||||||  ||||||||||||||||| ||| |||| || ||  ||| || |||||||||| |||| | ||||||||| |||||||| ||||||    
T  37383860 tttaagcatccaaaatttagtaattattc-tttaaaaaatcaaccgttataacttccaatgcattcaatatacaactttttattaaaaatttacca 37383766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 8260202 - 8260240
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaag 196  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  8260202 tttaagcatcccaaatttagtaattattcttttaaaaag 8260240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 8273620 - 8273658
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaag 196  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  8273620 tttaagcatcccaaatttagtaattattcttttaaaaag 8273658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 33461839 - 33461797
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgat 93  Q
    |||||||||||||| |||||||||| ||||||||||| |||||    
T  33461839 aataattatattagctatttatcaattgtgagccttagttgat 33461797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 362 - 404
Target Start/End: Original strand, 50168420 - 50168461
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctct 404  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  50168420 agaggctatggtccccaatacaccgtacac-gcaaaactctct 50168461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 14031416 - 14031347
Alignment:
Q  187 ttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattt 256  Q
    |||| ||||||| || |||||||| | ||||||| |||| | ||||||||||||  ||||||||||||||    
T  14031416 tttttaaaagtcaacaattacaatattcaatgcattcaatatacaacttttcatataaaacttaccattt 14031347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 39195832 - 39195740
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    |||||| |||| |||||||||| || || |||  ||| ||| ||||||||||||| ||||||| | || ||||||||||||||  |||||||||    
T  39195832 tttaaggatcttaaatttagtatttttt-tttaaaaaggtcaactattacaattttcaatgcattgaatacacaacttttcatataaaacttac 39195740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 3e-47; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 28770477 - 28770621
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  28770477 tttaagcatcccaaaattagtaattattcttttgaaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaacttactattta 28770576  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
     ||||||||||||||||  | | ||||||||||||||||||||||    
T  28770577 gagtgcttaaagagtgttccggaggcactcgttaacatttccctt 28770621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 27123274 - 27123412
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||||| | |  |||||||||||| ||||||||||||||||||    
T  27123274 tttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaacttaccattta 27123373  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatt 296  Q
    |||||||||||||||| | | ||||||||||||||||||    
T  27123374 aagtgcttaaagagtgccccgggggcactcgttaacatt 27123412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 21727512 - 21727367
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| || |||| |||||| | || |||||||||||| |||||     
T  21727512 tttaagcatctccaatttagtaattattcttttaaaaagtcaactattacaatttccaatacattcaatacacaaatatttattaaaaacttatcatttg 21727413  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    |||||||||||||||| | ||  |||||||||||||||||||||||    
T  21727412 aagtgcttaaagagtgccccaaaggcactcgttaacatttccctta 21727367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 158 - 306
Target Start/End: Original strand, 44537341 - 44537489
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| || ||||||||||||||||||| ||||||| ||||||| |||||||| || |   || ||| ||||||||||||||||||||| |||||    
T  44537341 tttaagcatcccatatttagtaattattcttttaaaaagtcaactattataatttccattgtatataatacataacttttcattaaaaacttactattta 44537440  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaatt 306  Q
    |||||||||||||||| | | ||||||||||||||||||||||||||||    
T  44537441 aagtgcttaaagagtgccccgggggcactcgttaacatttcccttaatt 44537489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 22742476 - 22742356
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  22742476 ttatgtaggcaaataccgtaacaataattatattagttatttatcaactgtgagccttagttgattagtgataaaattaagtaataaggctattagattt 22742377  T
Q  129 ctaatgagataattaattaaa 149  Q
    ||||| |||||||||||||||    
T  22742376 ctaattagataattaattaaa 22742356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 35496679 - 35496537
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||||||| |||  |||| ||||||| ||||||||||||| ||||||| |||  |||||| ||||||||||||||||||||||||    
T  35496679 tttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccattta 35496580  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||| |||||||||| | | ||||||||||||||||||||||    
T  35496579 aagtgtttaaagagtgccccgggggcactcgttaacatttccc 35496537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 26383291 - 26383402
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgaga 137  Q
    |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||    
T  26383291 caaatatcataataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagatttctaattgga 26383390  T
Q  138 taattaattaaa 149  Q
    ||||||||||||    
T  26383391 taattaattaaa 26383402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 407 - 672
Target Start/End: Original strand, 351668 - 351924
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctcc-gtttatggt 504  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||  ||||||| || || | ||||||| || ||| |||||   | |||| ||    
T  351668 aagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcctcttttggttatcgt 351767  T
Q  505 tgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgta 604  Q
    || |||    |||||||||| || ||||  |||||| ||||||||||||||| ||||||||||  | |||||||||||||||        | ||||||||    
T  351768 tgttga----tgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgta 351855  T
Q  605 catccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
     |||||||||||||||| ||||||||||||||||||| |  |||| ||||||||||||| |||||||||    
T  351856 gatccgatcataatcatgttcaatgttttgtttgcttccgctgttgattcataattgttgaacatgttt 351924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 5849165 - 5849263
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  5849165 aataattatattagttatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 5849263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 170 - 304
Target Start/End: Original strand, 7653588 - 7653722
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||| || ||||||||| ||||||| ||||||| |||||||||| || |||  |||||||||||||||||||||||||  ||||||||||||||||    
T  7653588 aaatttagcaactattcttttaaaaagtcaactattataatttccaattcattcattacacaacttttcattaaaaacttactttttaaagtgcttaaag 7653687  T
Q  270 agtgtcacaggggcactcgttaacatttcccttaa 304  Q
    |||||| | || | |||||||||||||| ||||||    
T  7653688 agtgtcccgggagaactcgttaacattttccttaa 7653722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 158 - 312
Target Start/End: Original strand, 43234790 - 43234943
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  | ||||||||||||||||||| |||| |  |||||||||||||||| | || |||| ||| |||||||||||||||| |||| |||||    
T  43234790 tttaagcatcctatatttagtaattattcttttaaaaaataaactattacaatttccattacattcaatacataacttttcattaaaaatttactattta 43234889  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaatat 312  Q
    |||||||||||||||| | |  |||||||||||||||||||||| || |||||||    
T  43234890 aagtgcttaaagagtg-cccgagggcactcgttaacatttccctaaactaaatat 43234943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 28663244 - 28663104
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  || ||||| |||||||||||| ||||||| ||||||||||||| ||||||| |||| |||||| |||||||||||| ||||| |||||    
T  28663244 tttaagcatcataactttag-aattattcttttaaaaagtcaactattacaattttcaatgcattcaatacacaatttttcattaaaaccttactattta 28663146  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcc 299  Q
    |||||||||||||||| | | | |||| ||||||||||||||    
T  28663145 aagtgcttaaagagtgccccggaggcattcgttaacatttcc 28663104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 35731287 - 35731430
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  ||||||||  || ||||||||| ||||||| ||||||||||||||||||||| | || ||||||||||| || || ||||||| | |||    
T  35731287 tttaagcataccaaatttaacaactattcttttaaaaagtcaactattacaatttccaatgcacttaatacacaactttttataaagaacttactaatta 35731386  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||||||||||||| | | ||||||||||||||||||||||||    
T  35731387 aagtgcttaaagagtg-cccgggggcactcgttaacatttccctt 35731430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 158 - 298
Target Start/End: Complemental strand, 39321088 - 39320948
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  ||||||||  |||||||||||| ||||||| ||||||||||||| ||||| | |||| ||||||||||| || |||||||||| | |||    
T  39321088 tttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaattttcaatgtattcaatacacaacttttaataaaaaacttactaatta 39320989  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    |||||||||||||||||| ||  | ||||||||||||||||    
T  39320988 aagtgcttaaagagtgtctcaaagacactcgttaacatttc 39320948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 3811715 - 3811595
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  3811715 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 3811616  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  3811615 ctaattggataattaattaaa 3811595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 3817857 - 3817737
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  3817857 ttatgtaggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatgaaattaagtaataaggctattagattt 3817758  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  3817757 ctaattggataattaattaaa 3817737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 28421293 - 28420980
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  28421293 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 28421195  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  28421194 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgccttgaaagctttatccaggt 28421099  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  28421098 attcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 28421007  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||| ||||||||| |||||||||    
T  28421006 attgatttataattgttgaacatgttt 28420980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 35153075 - 35152955
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||  ||||    
T  35153075 ttatgtgggcaaatatcgtaacaataattatattagatatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattcgattt 35152976  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  35152975 ctaattggataattaattaaa 35152955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 14651459 - 14651344
Alignment:
Q  195 agtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaaca 294  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||||||| ||| |||| |||||||||||||||| | |  |||||||||||||||    
T  14651459 agtcaactgttacaatttccaatgcaatcattacacaacttttcattaaaaacctactattttaagtgcttaaagagtgccccgagggcactcgttaaca 14651360  T
Q  295 tttcccttaattaaat 310  Q
    |||||||  |||||||    
T  14651359 tttccctatattaaat 14651344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 362 - 640
Target Start/End: Original strand, 20238775 - 20239057
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  20238775 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 20238874  T
Q  450 atcagccatcgctaaccctgttctttgtttcatata---tcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| ||    ||| ||||  | |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  20238875 atcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttattgttgttga----tgagagggctgccttgaaagctttatccaggt 20238970  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||||||||||||||  | ||||||        |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  20238971 attcctaataccctaattcttaatatccttg--------ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 20239057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 338994 - 339114
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||| ||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  338994 ttatgtgggcaaatatcataacaataattatattagctatttatcaattgtcagccttagttgattagtgatcaaattaagtaataaggctattagattt 339093  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||| ||||||||    
T  339094 ctaattggataaataattaaa 339114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 351400 - 351520
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||| ||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  351400 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtcagccttagttgattagtgatcaaattaagtaataaggctattagattt 351499  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||| ||||||||    
T  351500 ctaattggataaataattaaa 351520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 28421505 - 28421414
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  28421505 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 28421414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 35148546 - 35148435
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgaga 137  Q
    |||||| | ||| |||||||||||||| |||||||||| | ||||||||| |||||||||||| ||||||||||| |||||||||  |||||||||  ||    
T  35148546 caaatatcgtaacaataattatattagctatttatcaattatgagccttagttgattagtgatcaaattaagtaataaggctattggatttctaattgga 35148447  T
Q  138 taattaattaaa 149  Q
    ||||||||||||    
T  35148446 taattaattaaa 35148435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 407 - 670
Target Start/End: Complemental strand, 3811447 - 3811192
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgtt--tatgg 503  Q
    ||||||| |||||||||||| |||| ||||||| ||||| ||||||||||  ||||||| || || | ||||||| || |||  |||||  ||  ||| |    
T  3811447 aagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctcttttgttatcg 3811348  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||| | || ||||  |||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  3811347 ttgttga----tgagagggttgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 3811260  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  3811259 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 3811192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 407 - 670
Target Start/End: Complemental strand, 3817589 - 3817334
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| |||| ||||||| ||||| ||||||||||  ||||||| || || | ||||||| || |||  |||||  |  |||| |    
T  3817589 aagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctctttggttatcg 3817490  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||| | || ||||  |||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  3817489 ttgttga----tgagagggttgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 3817402  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  3817401 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 3817334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 275
Target Start/End: Original strand, 25886182 - 25886287
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||| ||||||||| ||  |||||| ||||||||||||| |||| || | || ||||||||||||||  |||||||||||||||||||| ||||||    
T  25886182 aaatttagaaattattctcttagaaagtcaactattacaattttcaatacatttaatacacaacttttcatataaaacttaccatttaaagtgtttaaag 25886281  T
Q  270 agtgtc 275  Q
    ||||||    
T  25886282 agtgtc 25886287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 43224193 - 43224081
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||| ||||  ||||||||||| ||||||| ||| ||||||||||||||| |   || ||||||||||||||||||||||| | |||||    
T  43224193 tttaagcatcctaaaattagatattattcttttaaaaagtcaactgttacaatttccaatgtatgtaatacacaacttttcattaaaaacttgctattta 43224094  T
Q  258 aagtgcttaaaga 270  Q
    |||||||||||||    
T  43224093 aagtgcttaaaga 43224081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 26380751 - 26380838
Alignment:
Q  59 tattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||| |||||||||| |||||||||  |||||||||||    
T  26380751 tattagctatttatcaattgtgagccttagttgattagtgatcaaattaaataataaggctattagatttctaattggataattaatt 26380838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 30219598 - 30219499
Alignment:
Q  52 ataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaagg 151  Q
    ||||| ||| ||||||||||| || |||||||||||||||||||||||| ||||||||| | || | ||||| ||||||||| ||||| |||||||||||    
T  30219598 ataataatagtagttatttattaattgtgagccttaattgattagtgatcaaattaagttataaagttattagatttctaattagatagttaattaaagg 30219499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 169 - 298
Target Start/End: Original strand, 3692888 - 3693018
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcat-taaaaacttaccatttaaagtgcttaa 267  Q
    ||||||||| |||||||||||| |||| || ||||||||||||||||||||| |||| |||||| |||||||  |||||||||| | ||||| | |||||    
T  3692888 caaatttagcaattattcttttaaaaaatcaactattacaatttccaatgcactcaatacacaatttttcataaaaaaacttactaattaaaatacttaa 3692987  T
Q  268 agagtgtcacaggggcactcgttaacatttc 298  Q
    |||||| | | |   ||||||||||||||||    
T  3692988 agagtgccccggaaacactcgttaacatttc 3693018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 9719084 - 9718950
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||| ||||||| |||||||||    ||| ||||||||| ||||| | |||  ||| ||||||||||  |||||||||||||||||||||||||||    
T  9719084 aaatttagaaattattattttcaaaa----actgttacaattttcaatgtattcattacataacttttcatataaaacttaccatttaaagtgcttaaag 9718989  T
Q  270 agtgtcacaggggcactcgttaacatttccc-ttaattaa 308  Q
    ||||||  | || |||||||||||||||||| ||||||||    
T  9718988 agtgtctga-ggacactcgttaacatttcccattaattaa 9718950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 535 - 672
Target Start/End: Original strand, 339379 - 339509
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||    
T  339379 ctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttg 339470  T
Q  634 tttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||| |  | || ||||||||||||| |||||||||    
T  339471 tttgcttccgctattgattcataattgttgaacatgttt 339509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 5979723 - 5979631
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgag-ccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| |  ||| |||||||||||||||||| ||||||||||| |||||||    
T  5979723 ttatgtgggcaaatatcgtaataataattatattagttatttatcaatttagagcccttaattgattagtgatcaaattaagtaataaggcta 5979631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 8824424 - 8824542
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| ||| |||||||||||||||| |||||||||| |||||| |||||||||||| ||||  ||||| |||| |||| ||||| ||||    
T  8824424 ttatgtaggcaaatatctttataataattatattagctatttatcaattgtgaggcttaattgattaatgatcgaattaggtaataaggatattagattt 8824523  T
Q  129 ctaatgagataattaattaa 148  Q
    ||  | ||||||||||||||    
T  8824524 ct-tttagataattaattaa 8824542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 10200593 - 10200711
Alignment:
Q  182 tattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggg 281  Q
    ||||||||| ||||||| ||  |||||||||| |||||| | || ||| ||||||  || ||||||||| |||||||||||||||||||||||||    |    
T  10200593 tattcttttaaaaagtcaaccgttacaatttcaaatgcattaaatacataactttctat-aaaaacttatcatttaaagtgcttaaagagtgtcatgaag 10200691  T
Q  282 gcactcgttaacatttccct 301  Q
    ||||||||||||||||||||    
T  10200692 gcactcgttaacatttccct 10200711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 535 - 670
Target Start/End: Complemental strand, 42767446 - 42767318
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||| ||||||||||||||||||||||  | |||||||||||||||        |||||||||| |||||||||||||||| |||||| |||||    
T  42767446 ctttatccagatattcctaataccctaattcttaatatccttgataaatcaa--------atatgtcgtagatccgatcataatcatgttcaatattttg 42767355  T
Q  634 tttgctttcattgttaattcataattgttaaacatgt 670  Q
    ||||||| |  | || ||||||||||||| |||||||    
T  42767354 tttgcttccgctattgattcataattgttgaacatgt 42767318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 43539617 - 43539696
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaagg 117  Q
    |||||| | ||| ||||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||| ||||    
T  43539617 caaatatcgtaaaaataattatattaattatttatcatttgtgagccttaattgattagtgatcaaattaagtaataagg 43539696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 171 - 297
Target Start/End: Complemental strand, 35923596 - 35923474
Alignment:
Q  171 aatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaaga 270  Q
    |||||||| ||||||||||| |||| |  ||||||||||||||||||||| |||    | ||||||||| ||||||||||  |||||||||| |||||||    
T  35923596 aatttagtcattattctttttaaaaataaactattacaatttccaatgcattca----ataacttttcaataaaaacttattatttaaagtgtttaaaga 35923501  T
Q  271 gtgtcacaggggcactcgttaacattt 297  Q
    ||||  | | | |||||||||||||||    
T  35923500 gtgttccggagacactcgttaacattt 35923474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 18801050 - 18801122
Alignment:
Q  168 tcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcat 240  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||| |||| |||| || ||||||||||||||    
T  18801050 tcaaatttagcaattactcttttcaaaagtcaactattacaattttcaatacaatgaatacacaacttttcat 18801122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 18667006 - 18666928
Alignment:
Q  57 tatattagttatttatcaagtgtgagcctta--attgattagtgattaaattaagtaacaaggctattaaatttctaat 133  Q
    |||||||||||||||||||  ||||||||||  |||||| |||||| ||||||||||| |||||||||| |||||||||    
T  18667006 tatattagttatttatcaaccgtgagccttataattgataagtgatcaaattaagtaataaggctattagatttctaat 18666928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 512 - 670
Target Start/End: Original strand, 26383611 - 26383762
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccga 611  Q
    ||||||||||||| |||| ||  ||| ||  ||||||||||||||||||||||||| || | |||||||||||||        | |||||||| ||||||    
T  26383611 tgttgagagggctgccatcaaagcttcatcaaggtattcctaataccctaattcttagtatgcttgataaatcaa--------acatgtcgtagatccga 26383702  T
Q  612 tcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    |||| ||||| |||||| ||||||||| ||   ||||| ||||||||||||| |||||||    
T  26383703 tcatgatcatgttcaatattttgtttgtttctgttgttgattcataattgttgaacatgt 26383762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 302
Target Start/End: Complemental strand, 8920760 - 8920665
Alignment:
Q  207 caatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||||||||||| | |  ||| |||||||||  ||||| ||||| |||||||  ||||||||||| | ||||| ||||||||||||||||||||    
T  8920760 caatttccaatgcattgattacataacttttcaaaaaaaaattaccttttaaaggtcttaaagagtgccccagggccactcgttaacatttccctt 8920665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 26239635 - 26239504
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||| |||||||||||  ||||||  ||  ||| | ||||||||||| | || | |||| |||||||||||||||||| |||||||||| ||||||    
T  26239635 aaatttagcaattattctttcaaaaagttaacgtttatagtttccaatgcattgaatatacaatttttcattaaaaacttactatttaaagtgtttaaag 26239536  T
Q  270 agtgtcacaggggcactcgttaacatttccct 301  Q
    |||  |  ||  ||||| ||||||||||||||    
T  26239535 agtaccctagaagcacttgttaacatttccct 26239504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 32051426 - 32051330
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||||||||||| |||| ||||||| ||||| ||||||| ||  ||| |||| | |  | |||||||||||||||||| ||||||||||||||||    
T  32051426 aaatttagtaattatttttttgaaaagtcaactatgacaattttcatagcattcaatata--atttttcattaaaaacttactatttaaagtgcttaaa 32051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 640
Target Start/End: Complemental strand, 35148173 - 35148057
Alignment:
Q  518 gagggcttccatgaacactttatacaggtattcctaataccc-taattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcata 616  Q
    ||||||| |||||||  |||||| |||||||||||||||||| ||||||||  | |||||||||||||||        |  ||||||| |||||||||||    
T  35148173 gagggctaccatgaaagctttatccaggtattcctaatacccctaattcttaatatccttgataaatcaa--------acgtgtcgtagatccgatcata 35148082  T
Q  617 atcat-ttcaatgttttgtttgctt 640  Q
    ||||| |||||||||||||||||||    
T  35148081 atcatgttcaatgttttgtttgctt 35148057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 40754040 - 40753938
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||| |||||||| |||  |||| || ||||||||| |||| ||| || | || |||||||||||||||||||||||| |||||||| || ||||||    
T  40754040 aaatttaataattattttttaaaaaaatcaactattacattttc-aatacatttaatacacaacttttcattaaaaacttatcatttaaaatgtttaaag 40753942  T
Q  270 agtg 273  Q
    ||||    
T  40753941 agtg 40753938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 47754531 - 47754468
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaa 304  Q
    |||||| |||| ||||||||  ||||||||||| | ||||||||||||||||||||||||||||    
T  47754531 taaaaatttactatttaaaggtcttaaagagtgccccaggggcactcgttaacatttcccttaa 47754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 339261 - 339319
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  339261 aagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaac 339319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 37158450 - 37158321
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||||||||||| |||| ||||||| ||||||||||||| ||||||| | || ||| || |||| || ||||| |||  |||||||||| || ||     
T  37158450 aaatttagtaattattattttaaaaagtcaactattacaattttcaatgcagtgaatacataattttttataaaaaatttattatttaaagtg-ttcaaa 37158352  T
Q  270 agtgtcacaggggcactcgttaacatttccc 300  Q
    || ||  | ||||||| ||||||||||||||    
T  37158351 agagtgcccggggcacgcgttaacatttccc 37158321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 48488228 - 48488172
Alignment:
Q  214 caatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaaga 270  Q
    ||||||| | || ||| |||||||||||||||||||| |||||||||||||||||||    
T  48488228 caatgcattgaatacataacttttcattaaaaacttatcatttaaagtgcttaaaga 48488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 34117942 - 34117843
Alignment:
Q  193 aaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaa 292  Q
    |||||| |||||||| |||||||||||  | |  | |||| |||| |||||||||||| |||||||| |||||||||||||||   | ||||||||||||    
T  34117942 aaagtcaactattacgatttccaatgcgttaattatacaattttttattaaaaacttatcatttaaaatgcttaaagagtgtcctggaggcactcgttaa 34117843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 42936024 - 42936109
Alignment:
Q  175 tagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtg 262  Q
    |||||||||||||||| |||| || ||||||||||||| ||||||| | || |||||| |||||||| ||||||| | ||||||||||    
T  42936024 tagtaattattcttttaaaaaatcaactattacaattt-caatgcatttaatacacaatttttcatt-aaaacttgctatttaaagtg 42936109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 44592878 - 44592945
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaactttt 237  Q
    ||||||| ||||||||||||| ||||||  ||||||||||||| ||||| | |||| |||||||||||    
T  44592878 aaatttaataattattcttttaaaaagttaactattacaattttcaatgtattcaatacacaactttt 44592945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 15843828 - 15843886
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||||||||| |||||| ||||| ||||||||||  |||||||    
T  15843828 aagagaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaac 15843886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 15860937 - 15860995
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||||||||| |||||| ||||| ||||||||||  |||||||    
T  15860937 aagagaacttgaggcataaatgtaccagttgaggaagaaccaaatcagccgccgctaac 15860995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 27337704 - 27337790
Alignment:
Q  165 atctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    ||||||||||||  |||||||||||  |||| || ||||||||| ||| |||| || | || |||||||||||||| ||||||||||    
T  27337704 atctcaaatttaacaattattctttaaaaaaatcaactattacagtttacaatacattaaatacacaacttttcataaaaaacttac 27337790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 36973386 - 36973476
Alignment:
Q  207 caatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    |||||||||||||||| || | |||| ||||||| ||||| |||| |||||||   |||||||||||||  || ||||||| |||||||||    
T  36973386 caatttccaatgcaataaatatacaaattttcataaaaaaattactatttaaaacccttaaagagtgtcctagaggcactcattaacattt 36973476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 19559965 - 19559908
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    ||||||||||| ||| |  || ||||||||||| ||||||||||||||||||||||||    
T  19559965 taaaaacttactattaatggttcttaaagagtggcacaggggcactcgttaacatttc 19559908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 456
Target Start/End: Complemental strand, 35148287 - 35148238
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagcc 456  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||    
T  35148287 aagagaatttgaggcataaaggtaccggttgaggaagaaccaaatcagcc 35148238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 43539709 - 43539762
Alignment:
Q  308 aatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    |||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||    
T  43539709 aatatttaattaattgatatggactcaatgagtggatgtctggatgacccatta 43539762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 17157791 - 17157731
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||| ||||| |||||||  ||||||||||| | | ||||||||||||||||||||||||    
T  17157791 aaaaagttaccttttaaaggtcttaaagagtgcctcgggggcactcgttaacatttccctt 17157731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 35152963 - 35152903
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||    
T  35152963 ttaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccatta 35152903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 642
Target Start/End: Complemental strand, 5979325 - 5979225
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||||||||||||||    |||||        ||||||||||| |||||||| |||| ||||||||||| ||||||  ||||    
T  5979325 ctttatccaggtattcctaataccctaattcttaacatcctt--------aataaatcaaacatgtcgtagatccaatcataatcatgttcaatagtttg 5979234  T
Q  634 tttgctttc 642  Q
    |||||||||    
T  5979233 tttgctttc 5979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 22742033 - 22741978
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||    
T  22742033 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttcagtttgctt 22741978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 46116957 - 46116899
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    ||||||||||||||||| || ||||||||||| | ||||||||||||||| |||| ||||    
T  46116957 aaaaacttaccatttaaggtccttaaagagtg-cccaggggcactcgttagcattcccct 46116899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 7e-45; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 18229708 - 18229564
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||||||| ||||||  |||||||||||||||||| || |||| | |||| ||||||||||||||||||||||||    
T  18229708 tttaagcatcccaaatttagtaattattcttttaaaaagttaactattacaatttccaatacattcaataaacaatttttcattaaaaacttaccattta 18229609  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||||||||||||||| | |  |||||||||||||||||||||    
T  18229608 aagtgcttaaagagtgtcccggaagcactcgttaacatttccctt 18229564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 300
Target Start/End: Original strand, 30104804 - 30104946
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||| |||| |||| ||||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  30104804 tttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaacttaccactta 30104903  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||| ||||||||||   | |||||||| |||||||||||||    
T  30104904 aagtgtttaaagagtgctccgggggcactagttaacatttccc 30104946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 30501246 - 30501103
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||| || |||| ||||||||||||||| ||||||||| |||||    
T  30501246 tttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactattta 30501147  T
Q  258 aagtgcttaaagagtgtcac-aggggcactcgttaacatttccc 300  Q
    ||||||||||  |||| | |  ||||||||||||||||||||||    
T  30501146 aagtgcttaacaagtgccccggggggcactcgttaacatttccc 30501103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 30541589 - 30541446
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||| || |||| ||||||||||||||| ||||||||| |||||    
T  30541589 tttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactattta 30541490  T
Q  258 aagtgcttaaagagtgtcac-aggggcactcgttaacatttccc 300  Q
    ||||||||||  |||| | |  ||||||||||||||||||||||    
T  30541489 aagtgcttaacaagtgccccggggggcactcgttaacatttccc 30541446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 30384930 - 30384810
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| ||||||||   |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||| |||||||||  ||||    
T  30384930 ttatgtggacaaatattgtaataataattatattagctatttatcagttgtgagccttaattgattagtgattaaattaagtaataaggctattggattt 30384831  T
Q  129 ctaatgagataattaattaaa 149  Q
    ||||| |||||||||||||||    
T  30384830 ctaattagataattaattaaa 30384810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 16667398 - 16667257
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||| ||||||||||||| ||||||| | |||||||||||||||| || |||| |||||| |||||||||||||||||| |||||    
T  16667398 tttaagcatcacaaatttaataattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaatttttcattaaaaacttactattta 16667299  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcc 299  Q
    ||||||||||| |||||    | | |||||||||||||||||    
T  16667298 aagtgcttaaaaagtgttctggagacactcgttaacatttcc 16667257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 17692262 - 17692413
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||||||||||||||||| || ||||||| ||| ||||||||| ||||||||| |  ||||||||||||||||||||| ||| ||||     
T  17692262 tttaagcatcctaaatttagtaattattctcttaaaaagtcaactgttacaattttcaatgcaattactacacaacttttcattaaaaacctactatttt 17692361  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaat 310  Q
    |||||||||||||||  | | |||||||||||||||||||||||  |||||||    
T  17692362 aagtgcttaaagagt-acccgggggcactcgttaacatttccctatattaaat 17692413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 41296892 - 41297012
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  41296892 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 41296991  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  41296992 ctaattggataattaattaaa 41297012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 20499758 - 20499871
Alignment:
Q  36 gacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatga 135  Q
    |||||||| | |||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||| ||| |||||| ||||||| | |    
T  20499758 gacaaatatcgtaataataattatattagctatttatcaattgtgagtcttaattgattagtgatcaaattaagtaataagactattagatttctagtaa 20499857  T
Q  136 gataattaattaaa 149  Q
    ||||||||||||||    
T  20499858 gataattaattaaa 20499871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 14609753 - 14609864
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgaga 137  Q
    |||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||  |||||| ||||||| | |||    
T  14609753 caaatatcgtaataataattatattagttacttatcaattgtgagccttaattgattagtgatcaaattaagtaataaaactattagatttctagtaaga 14609852  T
Q  138 taattaattaaa 149  Q
    ||||||||||||    
T  14609853 taattaattaaa 14609864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 9276683 - 9276573
Alignment:
Q  161 aagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaag 260  Q
    ||||||| ||||||||||||||||| |||| |||| || ||||||| ||||| ||||||| |||| ||| ||||||||||||||||||||| ||||||||    
T  9276683 aagcatcccaaatttagtaattatttttttaaaaaatcaactattataattttcaatgcattcaatacataacttttcattaaaaacttactatttaaag 9276584  T
Q  261 tgcttaaagag 271  Q
    |||||||||||    
T  9276583 tgcttaaagag 9276573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 12686513 - 12686200
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  12686513 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 12686415  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  12686414 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgccttgaaagctttatccaggt 12686319  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  12686318 attcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 12686227  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||| ||||||||| |||||||||    
T  12686226 attgatttataattgttgaacatgttt 12686200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 12692615 - 12692302
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  12692615 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 12692517  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  12692516 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgccttgaaagctttatccaggt 12692421  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  12692420 attcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 12692329  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||| ||||||||| |||||||||    
T  12692328 attgatttataattgttgaacatgttt 12692302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 34899242 - 34899099
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| ||||| |||||||||||||||| ||||| | | |||||||||||| |||||| | || | | ||||||||||| ||||||||| |||||    
T  34899242 tttaagcatcccaaatatagtaattattcttttaaaaagacaattattacaatttctaatgcatttaatatataacttttcatttaaaacttactattta 34899143  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||| |||||||||| | | || |||||||||||||||||||||    
T  34899142 aagtgtttaaagagtg-ccctggtgcactcgttaacatttccctt 34899099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 158 - 304
Target Start/End: Complemental strand, 112592 - 112446
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||  |||||||| ||||| | | || |||||| ||||||||||||| ||   |||||    
T  112592 tttaagcatcataaaattagtaattattcttttgaaaagtcaactgatacaattttcaatgtatttaatacacaatttttcattaaaaatttgttattta 112493  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaa 304  Q
    |||||||||||||||||| | |||||||||||||||| || ||||||    
T  112492 aagtgcttaaagagtgtccccggggcactcgttaacagtttccttaa 112446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 407 - 670
Target Start/End: Complemental strand, 28525664 - 28525409
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    |||||||  ||||||||||| |||||||||||| ||||||||||||||||| |||| || || || | ||||||| || ||| ||||||  |  |||| |    
T  28525664 aagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagatcatctcctctctttggttatcg 28525565  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||  |||||| ||||||||| ||||||||||||||||  | |||||        ||||||||||| |||||||    
T  28525564 ttgttga----tgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatcctt--------aataaatcaaacatgtcgt 28525477  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  28525476 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 28525409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 7390071 - 7389974
Alignment:
Q  52 ataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  7390071 ataattatattagctatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 7389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 12686725 - 12686634
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  12686725 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 12686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 12692827 - 12692736
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  12692827 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 12692736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 8706915 - 8706813
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||||||||||||||| |||||||||| |||| | ||||||||||||||||| ||||||||| | ||| | |||||||||||||| |||||||| |||    
T  8706915 taataataattatattagctatttatcaactgtgggtcttaattgattagtgatcaaattaagtgataagacgattaaatttctaattagataatttatt 8706816  T
Q  147 aaa 149  Q
    |||    
T  8706815 aaa 8706813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 28525910 - 28525812
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||| ||| |||||||||  ||||||||||||||    
T  28525910 aataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctgttagatttctaattggataattaattaaa 28525812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 407 - 670
Target Start/End: Complemental strand, 28531760 - 28531505
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    |||||||  ||||||||||| |||| ||||||| ||||||||||||||||| |||| || || || | ||||||| || ||| ||||||  |  |||| |    
T  28531760 aagagaacgtgaggcataaaggtactggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagatcatctcctctctttggttatcg 28531661  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||  |||||| ||||||||| ||||||||||||||||  | |||||        ||||||||||| |||||||    
T  28531660 ttgttga----tgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatcctt--------aataaatcaaacatgtcgt 28531573  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  28531572 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 28531505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 28532006 - 28531908
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||| ||| |||||||||  ||||||||||||||    
T  28532006 aataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctgttagatttctaattggataattaattaaa 28531908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 7719204 - 7719321
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  || |||||  |||||||||||| |||| || ||||||||||||||||||  | |||| ||||||||||||||||||||||||  |||||    
T  7719204 tttaagcataccatatttaaaaattattcttttaaaaaatcaactattacaatttccaatatattcaatacacaacttttcattaaaaacttattattta 7719303  T
Q  258 aagtgcttaaagagtgtc 275  Q
    ||||||||||| ||||||    
T  7719304 aagtgcttaaaaagtgtc 7719321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 15720078 - 15720204
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    ||||||||  |||||||||||| ||||||| ||||||||||||||||||| | | || |||||||||||||| || ||||||| | |||||||| |||||    
T  15720078 caaatttatcaattattcttttaaaaagtcaactattacaatttccaatgaacttaatacacaacttttcataaagaacttactaattaaagtgtttaaa 15720177  T
Q  269 gagtgtcacaggggcactcgttaacatt 296  Q
    |||||| || ||| | ||||||||||||    
T  15720178 gagtgt-actgggacgctcgttaacatt 15720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 32094768 - 32094677
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  32094768 ttatgtgggcaaatatcgtaataataattatattaactatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 32094677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 407 - 672
Target Start/End: Original strand, 30772163 - 30772422
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccct--gttctttgtttcatatatcacctctccgtttatggt 504  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||  ||||||||||  ||| | ||||||| ||  || | | || | | | ||    
T  30772163 aagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgccgctaaccctttgttgtgtgtttcagat--catcacaccttctcttgt 30772260  T
Q  505 tgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgta 604  Q
    | ||   ||||||||||||| |||| || ||||||| |||||| |||||||||||||||||||  | ||||||        |||||||||| |||| ||     
T  30772261 ttattgttgttgagagggctgccataaaaactttatccaggtaatcctaataccctaattcttaatatccttg--------ataaatcaaacatgttgtc 30772352  T
Q  605 catccgatcataatcat-ttcaatg-ttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
     |||||||||||||||| |||| || |||||||||||| || |||| |||||||||| || |||||||||    
T  30772353 gatccgatcataatcatgttcattgtttttgtttgcttccactgtttattcataattattgaacatgttt 30772422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 2918703 - 2918587
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaa-cttaccattt 256  Q
    ||||||||| ||||||||| |||||||| |||  ||| ||| ||||||| ||||||||||||| | || ||||||||||||||||||||  |||| ||||    
T  2918703 tttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcatttaatacacaacttttcattaaaaattttacaattt 2918604  T
Q  257 aaagtgcttaaagagtg 273  Q
    ||| |||||||||||||    
T  2918603 aaaatgcttaaagagtg 2918587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 8221134 - 8221234
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||| ||||||||| || ||||||| |||||||||| || ||||||| |||| |||||| |||| ||||||||||||| ||||||| |||||||||    
T  8221134 aaatttagcaattattctcttaaaaagtcaactattacaactttcaatgcattcaatacacaattttttattaaaaacttactatttaaaatgcttaaag 8221233  T
Q  270 a 270  Q
    |    
T  8221234 a 8221234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 297
Target Start/End: Complemental strand, 5815177 - 5815038
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||| || ||||||||||||||||| ||| |||| |  ||||  |||||||||||| || |||||| ||| |||||||||||||||||||   ||     
T  5815177 tttaagcaccttaaatttagtaattattcatttaaaaatttaactaccacaatttccaatacattcaacatacatcttttcattaaaaacttactgcttt 5815078  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    |||||||||||||||| | ||   ||||||||||||||||    
T  5815077 aagtgcttaaagagtgccccaaaagcactcgttaacattt 5815038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 30771896 - 30772013
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |   |||||  |||||||||||||||||||||||| ||||||||||| |||||||| || |||    
T  30771896 ttatgtgggcaaatatcgtaataataattatattagct---tatcagttgtgagccttaattgattagtgatcaaattaagtaataaggctataaagttt 30771992  T
Q  129 ctaatgagataattaattaaa 149  Q
    || ||  ||||||||||||||    
T  30771993 cttattggataattaattaaa 30772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 362 - 586
Target Start/End: Original strand, 20499963 - 20500197
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |            ||||||| |||||||||||||||||||||| || ||||| |||    
T  20499963 agaggctatggtccccaatacaccgtacacggcaaaactctctgttctctccatttgaagagaacttgaggcataaatgtaccggttaaggaagaaccaa 20500062  T
Q  450 atcagccatcgctaaccctgttctttgtttcatatatc--acctctccgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggta 547  Q
    |||| ||   ||||||| | || ||||||||| ||  |    ||||| |||||| ||||    |||||||||||||| |||| ||   ||||| ||||||    
T  20500063 atcaaccgctgctaaccttcttgtttgtttcagatcgcctttctctctgtttatcgttg----atgttgagagggctgccataaaagttttatccaggta 20500158  T
Q  548 ttcctaataccctaattctttgtctccttgataaatcaa 586  Q
    || ||||||| ||||||||| || |||||||||||||||    
T  20500159 tttctaatactctaattcttagtatccttgataaatcaa 20500197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 3140826 - 3140953
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||| |||| || | || | ||||||||| ||| ||||||||  |||||||||| ||||||    
T  3140826 aaatttaataattattcttttaaaaagtcaactattacaattttcaattcatttaatatacaactttttatttaaaacttattatttaaagtgtttaaag 3140925  T
Q  270 agtgtcacaggggcactcgttaacattt 297  Q
     ||||| | ||  ||||| |||||||||    
T  3140926 tgtgtcccgggaacactcattaacattt 3140953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 32097568 - 32097489
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaa 108  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||    
T  32097568 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattggttagtgatcaaattaa 32097489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 40530541 - 40530448
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    ||||| ||||||| |||||||||||||| |||| ||||||  ||||| |||||||| ||| || |||| |||||||| ||||||||||||||||    
T  40530541 tttaaacatctcatatttagtaattattattttaaaaagttaactatcacaatttctaattcattcaatacacaactattcattaaaaacttac 40530448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 7968445 - 7968505
Alignment:
Q  213 ccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtg 273  Q
    |||||||| | || ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7968445 ccaatgcatttaatacacaacttttcattaaaaacttactatttaaagtgcttaaagagtg 7968505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 670
Target Start/End: Original strand, 41297292 - 41297413
Alignment:
Q  542 caggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    ||||||||||||||||||||||||||| | |||||||||||||||        | |||||||| ||||||||||||| || |||||||||||||||||||    
T  41297292 caggtattcctaataccctaattctttatatccttgataaatcaa--------acatgtcgtagatccgatcataattatgttcaatgttttgtttgctt 41297383  T
Q  641 tcattgttaattcataattgttaaacatgt 670  Q
        | || ||||||||||||| |||||||    
T  41297384 ctgctattgattcataattgttgaacatgt 41297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 586 - 672
Target Start/End: Original strand, 14610200 - 14610287
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||| |||||||| |||||||||||||||| ||||||| ||| ||||||| |  | |||||||||||||||| |||||||||    
T  14610200 ataaatcaaacatgtcgtaaatccgatcataatcatgttcaatggtttatttgcttccgctattaattcataattgttgaacatgttt 14610287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 19066634 - 19066551
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggc-tattaaatttcta 131  Q
    ||||||||||||||| |||||| ||||    ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  19066634 ataataattatattaattatttgtcaatctggagccttaattgattagtgatcaaattaagtaacaaggcttattagatttcta 19066551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 39558859 - 39558764
Alignment:
Q  172 atttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaa 267  Q
    ||||||||||||||| ||| |||| || ||| ||||||||||||||||| |  | |||| |||||||| ||||||||||| ||||||| |||||||    
T  39558859 atttagtaattattcatttaaaaattcaactgttacaatttccaatgcatttgatacacgacttttcaataaaaacttactatttaaaatgcttaa 39558764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 586 - 670
Target Start/End: Complemental strand, 7389656 - 7389571
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    |||||||||| |||||||  |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  7389656 ataaatcaaacatgtcgtggatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 7389571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 26318765 - 26318676
Alignment:
Q  53 taattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataatt 142  Q
    |||||||||||||||| |||||| | |||| ||||||||||||||||||||||||| ||| || | ||||| |||| || | ||||||||    
T  26318765 taattatattagttatctatcaattctgagacttaattgattagtgattaaattaattaataaagatattagatttttatttagataatt 26318676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 277
Target Start/End: Original strand, 13480018 - 13480138
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaag-tcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattt 256  Q
    ||||||||| |||||||||||||||||| |||  ||||  |  ||||||| ||||| ||||||| |||| ||||||  ||| |||||||| |||  ||||    
T  13480018 tttaagcatttcaaatttagtaattattttttaaaaaaaattaactattataattttcaatgcattcaatacacaatattttattaaaaatttattattt 13480117  T
Q  257 aaagtgcttaaagagtgtcac 277  Q
    |||||| ||||||||||||||    
T  13480118 aaagtggttaaagagtgtcac 13480138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 19060300 - 19060200
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggc-tattaaatttctaatgagataattaatta 147  Q
    |||||||||||||||| ||||| |||| |  ||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| | |||  ||||||||    
T  19060300 ataataattatattagctatttgtcaatttggagacttaattgattagtgatcaaattaagtaataaggcttattagatttctatttagaatattaatta 19060201  T
Q  148 a 148  Q
    |    
T  19060200 a 19060200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 512 - 640
Target Start/End: Complemental strand, 32094333 - 32094213
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccga 611  Q
    ||||||||||||| | |||||  |||||| ||||||||||||||||| ||||||||  | |||||||||||||||        | |||||||| |||| |    
T  32094333 tgttgagagggctgctatgaaagctttattcaggtattcctaatacc-taattcttaatatccttgataaatcaa--------acatgtcgtagatccta 32094243  T
Q  612 tcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||||||||||||||    
T  32094242 tcataatcatgttcaatgttttgtttgctt 32094213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 24054386 - 24054441
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  24054386 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 24054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 8208179 - 8208293
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | ||||||   |||||||||||| ||||||| | |||||||||||  |||||| |||  ||| ||||||||||  |||||||| ||||||    
T  8208179 tttaagcattttaaatttgaaaattattcttttaaaaagtcaattattacaatttttaatgcattcattacataacttttcatataaaacttatcattta 8208278  T
Q  258 aagtgcttaaagagt 272  Q
    | ||| |||||||||    
T  8208279 atgtgtttaaagagt 8208293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 481
Target Start/End: Original strand, 14610050 - 14610124
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttca 481  Q
    ||||||| || ||||||||| |||||||||||| ||||| ||||||||||  |||||||||| || |||||||||    
T  14610050 aagagaactttaggcataaaagtaccggttgaggaagaaccaaatcagccgccgctaacccttttgtttgtttca 14610124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 455
Target Start/End: Complemental strand, 19066390 - 19066342
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagc 455  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||||||    
T  19066390 aagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagc 19066342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 20499863 - 20499923
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||| |||| |||||||    
T  20499863 ttaattaaatatttaattaattgatatggactcaatgagtggatgtctggatggcccatta 20499923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 23117332 - 23117221
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | |||||||| | |||||||||| ||| ||  || ||||||||||||||| || | || ||| || |||||||||||||||||| |||||    
T  23117332 tttaagcattttaaatttagcagttattctttttaaa-gttaacaattacaatttccaatacatttaatacataatttttcattaaaaacttactattta 23117234  T
Q  258 aagtgcttaaaga 270  Q
    || || |||||||    
T  23117233 aaatgattaaaga 23117221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 41297004 - 41297064
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||  ||||||||||||    
T  41297004 ttaattaaatatttaattaattgatatggactcaatgagtggatgtccggatgacccatta 41297064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 241 - 304
Target Start/End: Original strand, 5758644 - 5758707
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaa 304  Q
    ||||||||||||||||||||| |||||| |||| | | |||||||||||||  |||||||||||    
T  5758644 taaaaacttaccatttaaagtccttaaaaagtgccccgggggcactcgttagtatttcccttaa 5758707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 7389882 - 7389778
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||| ||||||| || |||||||||||||||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  7389882 agaggctatggttcccaatatactgtacacggcaaaactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 7389783  T
Q  450 atcag 454  Q
    |||||    
T  7389782 atcag 7389778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 32097069 - 32097014
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||||||||||||||    
T  32097069 ataaatcaaacatgtcgtagatcctatcataatcatgttcaatgttttgtttgctt 32097014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 40530172 - 40530125
Alignment:
Q  253 atttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||    
T  40530172 atttaaagtgcttaaaaagtgtctcaagggcactcgttaacatttccc 40530125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 41047986 - 41048125
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||||||| ||||||| |||| ||| ||  | ||||| ||||||||||||| | ||  ||||  |||||||||||||||  ||||||     
T  41047986 tttaagcatcataaatttagcaattatttttttaaaaggttaattattataatttccaatgcattaaatgcacactttttcattaaaaactacccatttt 41048085  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    |||| |||||||||| ||   | ||||| |||||||||||    
T  41048086 aagtacttaaagagtatcctggaggcacccgttaacattt 41048125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 18963812 - 18963914
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaactt-accattt 256  Q
    |||||| ||||| ||||||||||||||||||   ||||||  ||||||||||||| ||||||| | || |||||| |||| || ||||| || |||||||    
T  18963812 tttaagaatctcgaatttagtaattattcttgagaaaagttaactattacaattttcaatgcattaaatacacaattttttataaaaaaattaaccattt 18963911  T
Q  257 aaa 259  Q
    |||    
T  18963912 aaa 18963914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 19060049 - 19059985
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgtt 471  Q
    ||||||| |||||||||||| ||||| |||||| ||||| ||||||||||  |||||||| ||||    
T  19060049 aagagaacttgaggcataaaagtaccagttgaggaagaaccaaatcagccgccgctaaccgtgtt 19059985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 41297104 - 41297148
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct 406  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||    
T  41297104 agaggctatggtccccaatacaccgtacacgacaatactctctct 41297148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 25408474 - 25408435
Alignment:
Q  66 tatttatcaagtgtgagccttaattgattagtgattaaat 105  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  25408474 tatttatcaattgtgagccttaattgattagtgatcaaat 25408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 672
Target Start/End: Complemental strand, 30384466 - 30384399
Alignment:
Q  606 atccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||||||| | ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  30384466 atccgatcataatcgtgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 30384399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 31672495 - 31672553
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||| ||||| |||||||  ||||||||||| | | ||||||||||||||||||||||    
T  31672495 aaaaagttaccttttaaaggtcttaaagagtgccccgggggcactcgttaacatttccc 31672553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 32094499 - 32094441
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||| ||||  |||||||    
T  32094499 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaattagccgccgctaac 32094441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 32097300 - 32097242
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| |||||||||||| |||||  |||||||||  |||||||    
T  32097300 aagagaacttgaggcataaaggtaccggttgaggaagaactaaatcagccgccgctaac 32097242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 362 - 404
Target Start/End: Complemental strand, 32097357 - 32097315
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctct 404  Q
    ||||||||||||||||||||||| |||||||| || |||||||    
T  32097357 agaggctatggtccccaatacaccgtacacggaaatactctct 32097315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 33021383 - 33021321
Alignment:
Q  50 taataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaa 112  Q
    |||||||||||||| ||||||||||| | ||||  || ||||||||||||| |||| ||||||    
T  33021383 taataattatattaattatttatcaactatgagatttgattgattagtgatcaaataaagtaa 33021321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 41297172 - 41297222
Alignment:
Q  415 ttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    |||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  41297172 ttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 41297222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 662
Target Start/End: Complemental strand, 16215282 - 16215205
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgtt 662  Q
    |||||||||| || ||||| |||| ||||||||||| || |||||||||||||||| |  | || |||||||||||||    
T  16215282 ataaatcaaacatttcgtagatccaatcataatcatgttaaatgttttgtttgcttccgctattgattcataattgtt 16215205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 29342401 - 29342462
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    ||||| ||||| |||||||  |||||| |||| | | |||||||||||||||||||||||||    
T  29342401 aaaaagttaccttttaaaggtcttaaaaagtgccccgggggcactcgttaacatttccctta 29342462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 4e-40; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 2864143 - 2864285
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||| |||| || |||||| |||||||||||  ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  2864143 tttaaacatcccatatttaggaattattcttta-aaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaacttactattta 2864241  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||||||||||||| | | ||||||||||||||||||||||||    
T  2864242 aagtgcttaaagagtg-ctccggggcactcgttaacatttccctt 2864285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 158 - 297
Target Start/End: Complemental strand, 47187927 - 47187789
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||| ||| |||| || ||||||| ||||||||||||| |||| ||| || |||||||||||||||||||||||     
T  47187927 tttaagcatcccaaatttagtaattattcatttaaaaaatcaactattataatttccaatgcattcaatacataatttttcattaaaaacttaccatttt 47187828  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    ||||| |||||||||||||| |||  ||||||||||||||    
T  47187827 aagtgtttaaagagtgtcac-gggatactcgttaacattt 47187789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 38748827 - 38748683
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  ||||||||| |||||||||||| ||||||| ||||||| ||||| ||||||| |||| |||||||||||||| || ||||||| | |||    
T  38748827 tttaagcataccaaatttagaaattattcttttaaaaagtcaactattataattttcaatgcactcaatacacaacttttcataaataacttactaatta 38748728  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    |||||||||||||||| |   |||||||||||||||||||||||||    
T  38748727 aagtgcttaaagagtg-cctgggggcactcgttaacatttccctta 38748683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 44409613 - 44409733
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||  |||    
T  44409613 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgattaaattaggtaataaggctattaggttt 44409712  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  44409713 ctaattggataattaattaaa 44409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 27954792 - 27954894
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||  |||||||||||    
T  27954792 taatactaattatattagttatttatcaattgtgaggcttaattgattagtgatcaaattaagtaataaggctattagatttctaatttgataattaatt 27954891  T
Q  147 aaa 149  Q
    |||    
T  27954892 aaa 27954894  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 31051157 - 31051277
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  31051157 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 31051256  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  31051257 ctaattggataattaattaaa 31051277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 31057657 - 31057777
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  31057657 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 31057756  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  31057757 ctaattggataattaattaaa 31057777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 158 - 298
Target Start/End: Original strand, 39150582 - 39150721
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||||||||||||||| | ||||||| ||||||||||||| ||||||| |||| ||| || |||||||||||| ||||| | |||    
T  39150582 tttaagcatcctaaatttagtaattattcttgtaaaaagtcaactattacaatttacaatgcattcaatacataaattttcattaaaatcttactagtta 39150681  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    |||||||||||||||| | | |||||||||  |||||||||    
T  39150682 aagtgcttaaagagtg-cccgggggcactctataacatttc 39150721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 43397123 - 43396976
Alignment:
Q  158 tttaagcatctcaaatttagtaattattc--ttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatt 255  Q
    ||||||||||  |||||||||||||||    |||| ||||||| ||||||| ||||||||||||| | || ||||||||||||||||||||||||| |||    
T  43397123 tttaagcatcctaaatttagtaattatatatttttaaaaagtcaactattataatttccaatgcatttaatacacaacttttcattaaaaacttactatt 43397024  T
Q  256 taaagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    ||||||| |||| |||||   |  ||||||||||||||||||||||||    
T  43397023 taaagtgtttaacgagtgcgccgagggcactcgttaacatttccctta 43396976  T

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Target: chr1; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 38152482 - 38152384
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||||||||| ||||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  38152482 aataattatattaattatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 38152384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 34409734 - 34409874
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | ||||||||||||| || ||||  ||| || | ||||| ||||||||||||| |||| |||||  ||||||||||||||||||||||||    
T  34409734 tttaagcattttaaatttagtaattttttttttttaaaatcaattattataatttccaatgcattcaatacacat-ttttcattaaaaacttaccattta 34409832  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcc 299  Q
    |||||| |||||| |||| |||  ||||||||||||||||||    
T  34409833 aagtgcataaagaatgtcccagaagcactcgttaacatttcc 34409874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 33458436 - 33458336
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaa 148  Q
    |||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||  ||||||||| ||||    
T  33458436 ataatagttatattggttatttatcaattgtgagccttaattgattagtgatcaaattaagtaataatgctattagatttctaactagataattacttaa 33458337  T
Q  149 a 149  Q
    |    
T  33458336 a 33458336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 8093383 - 8093272
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgaga 137  Q
    ||||| || ||| ||||||||||||||||||||||||| |||||| |||| ||||||| | || ||||||||||| |||||||||| |||||||||  ||    
T  8093383 caaatgccgtaacaataattatattagttatttatcaattgtgagtcttagttgattaataatcaaattaagtaataaggctattagatttctaattgga 8093284  T
Q  138 taattaattaaa 149  Q
    ||||||||||||    
T  8093283 taattaattaaa 8093272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 25275593 - 25275502
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  25275593 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 25275502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 25382082 - 25381991
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  25382082 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 25381991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 25388049 - 25387958
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  25388049 ttatgtgggcaaatatcgtaataataattatattatttatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 25387958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 50305810 - 50305901
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  50305810 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 50305901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 25387839 - 25387525
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  25387839 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 25387740  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    ||||||||||    | ||  |||||| |||||    
T  25387739 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgtttttaaagctttatccaggt 25387644  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  25387643 attcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 25387552  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||||||| ||||| |||||||||    
T  25387551 attgattcatatttgttgaacatgttt 25387525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 44829272 - 44829415
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||||||||||||||||  ||| ||| |||||||||||||  ||| || |||| ||||||||||| ||| ||||||||||  |||    
T  44829272 tttaagcatcccaaatttagtaattattctttaaaaaggtcaactattacaatttttaatacattcaatacacaactttttatt-aaaacttaccgatta 44829370  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||| ||||||||||||| | |   |||||||||| |||||||||    
T  44829371 aagtacttaaagagtgtcccggaaacactcgttaatatttccctt 44829415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 1077857 - 1077940
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaa 112  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  1077857 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaa 1077940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 158 - 301
Target Start/End: Original strand, 7212773 - 7212910
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| |||||||||||||||||||| ||||| ||||||  || |||||||||||||||||| |     |||||||||| ||| ||||||||| |||||    
T  7212773 tttaagtatctcaaatttagtaattatacttttaaaaagttaacaattacaatttccaatgcatt-----cacaactttttatttaaaacttacaattta 7212867  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    ||||| |||||||||||| || |  ||||| |||||||||||||    
T  7212868 aagtgtttaaagagtgtctca-gaacactcattaacatttccct 7212910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 161 - 300
Target Start/End: Original strand, 45640550 - 45640688
Alignment:
Q  161 aagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaag 260  Q
    ||||||| ||||||||  || ||||||||  ||||||| | ||||| ||||| ||||||| |||  |||||| ||||||| |||||||||| |||||||     
T  45640550 aagcatcccaaatttaagaactattctttcaaaaagtcaattattataattttcaatgcattcattacacaa-ttttcatcaaaaacttactatttaaaa 45640648  T
Q  261 tgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||||||||||||| | ||| ||||||||||||||||||    
T  45640649 tgcttaaagagtgtctcggggacactcgttaacatttccc 45640688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 39156261 - 39156380
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaa----cttttcattaaaaacttacca 253  Q
    ||||||||||  ||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| ||||||     |||| |||||||| ||||||    
T  39156261 tttaagcatcaaaaatttagtaattattcttttaaaaagtcaactactacaatttccaatgcattcaatacacaattttttttttattaaaaatttacca 39156360  T
Q  254 tttaaagtgcttaaagagtg 273  Q
    ||||||||| ||||| ||||    
T  39156361 tttaaagtgtttaaaaagtg 39156380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 407 - 672
Target Start/End: Original strand, 34739867 - 34740124
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||| || || | ||||||| || ||   |||||  |  |||| |    
T  34739867 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcattttctctctttggttatcg 34739966  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||   ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  34739967 ttgttga----tgagagggctgccttgaaaggtttattcaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 34740054  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||| | |||||||||    
T  34740055 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgatgaacatgttt 34740124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 25381870 - 25381558
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  25381870 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 25381771  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    ||||||||||   |  ||  |||||| |||||    
T  25381770 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgttacaaaagctttatccaggt 25381675  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||| ||||||||        | || ||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  25381674 attcctaataccctaattcttaatatccttggtaaatcaa--------acatttcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 25381583  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||||| ||||| |||||||    
T  25381582 attgattcatagttgttgaacatgt 25381558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 34739621 - 34739719
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| ||||||| || || | |||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||| ||||||||    
T  34739621 aataattatattagctatttataaattgagggccttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataaataattaaa 34739719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 4851350 - 4851210
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| |||| ||||  |||||||||||  ||||||| |||||||||||||| |||||| | |  || ||||||||||| || ||||||| | |||    
T  4851350 tttaagcatgtcaattttaaaaattattcttta-aaaagtcaactattacaatttcaaatgcacttactacccaacttttcataaagaacttactaatta 4851252  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcc 299  Q
    ||||||||||||||| || ||| || | ||||||||||||||    
T  4851251 aagtgcttaaagagtatcccagaggtattcgttaacatttcc 4851210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 164 - 301
Target Start/End: Original strand, 44329602 - 44329739
Alignment:
Q  164 catctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgc 263  Q
    ||||||| ||||| ||||||||||||| ||||||| ||||||| ||||| ||||||| |||| ||| || |||| | ||||||||| | ||||||||||     
T  44329602 catctcatatttaataattattcttttaaaaagtcaactattataattttcaatgcattcaatacataattttttactaaaaactttctatttaaagtgt 44329701  T
Q  264 ttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    ||||||| ||||   |   |||||||||||||||||||    
T  44329702 ttaaagaatgtcgtggaaacactcgttaacatttccct 44329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 304
Target Start/End: Complemental strand, 6883192 - 6883088
Alignment:
Q  200 actattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcc 299  Q
    |||||||||||||| |||||| |||  ||| ||||||||||  |||| ||| ||||||||||| ||||||||| || ||  |||||||||||||||||||    
T  6883192 actattacaatttcaaatgcattcattacataacttttcatataaaatttatcatttaaagtgtttaaagagtatctcaaaggcactcgttaacatttcc 6883093  T
Q  300 cttaa 304  Q
    |||||    
T  6883092 cttaa 6883088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 14746295 - 14746159
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    ||||||||| ||||||| | || |||| || ||| ||| ||||| |||||| || || ||||||||||||||  | ||||||| | ||||||||||| ||    
T  14746295 caaatttagcaattattttcttaaaaaatcaactgttataattttcaatgctatgaatacacaacttttcatatagaacttactaattaaagtgcttgaa 14746196  T
Q  269 gagtgtcacaggggcactcgttaacatttcccttaat 305  Q
    ||||| | | ||||||||||||||||||| |||||||    
T  14746195 gagtgcctcgggggcactcgttaacattttccttaat 14746159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 273
Target Start/End: Original strand, 31889186 - 31889278
Alignment:
Q  182 tattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaactttt-cattaaaaacttaccatttaaagtgcttaaagagtg 273  Q
    |||| |||| ||||||| |||||||| ||||| |||||| | || ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  31889186 tattttttttaaaagtcaactattacgatttctaatgcatttaatacacaactttttcattaaaaacttaccatttaaaatgcttaaagagtg 31889278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 8794416 - 8794561
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcat--taaaaacttaccatt 255  Q
    ||||||||||  ||||||||||||||||||||| ||||||| ||||||| ||||| ||||||| || | ||||||||||| ||   ||||| |||| | |    
T  8794416 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattataattttcaatgcactccatacacaactttttataaaaaaaatttactaat 8794515  T
Q  256 taaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||| |||||||| || | | | | ||||||||||||||||||||    
T  8794516 taaagtacttaaagattg-ctctgagacactcgttaacatttccctt 8794561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 4280258 - 4280172
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaat 133  Q
    |||||||||||||||||  |||||||||| ||||| |||||||||||||||||| ||||||||||| |||  ||||| || ||||||    
T  4280258 taataataattatattaactatttatcaattgtgaaccttaattgattagtgatcaaattaagtaataagattattagatatctaat 4280172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 24927295 - 24927225
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct 119  Q
    |||||||||||||||| |||||||||| |  ||| ||||||||||||||||| ||||||||||||||||||    
T  24927295 ataataattatattagctatttatcaatttggagtcttaattgattagtgatcaaattaagtaacaaggct 24927225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 30822882 - 30822741
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| || |||||||||||||||||||| || ||||||  | ||||||||||| || |||| | || |||||| || |   |||||| ||||||||||    
T  30822882 tttaaggatttcaaatttagtaattattctcttaaaaagttaattattacaattttcattgcattgaaaacacaatttatttataaaaatttaccattta 30822783  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||||||||||| |||| | ||| |||| |||||||||||||    
T  30822782 aagtgcttaaagattgtc-cggggacacttgttaacatttccc 30822741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 32562459 - 32562350
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| |||| |||||||||||||||| |||| |||| || ||||||||||||| ||||||| | || |||||| |||| | ||||||||||| |||||    
T  32562459 tttaagaatctaaaatttagtaattattattttaaaaattcaactattacaattttcaatgcagtgaatacacaatttttta-taaaaacttactattta 32562361  T
Q  258 aagtgcttaaa 268  Q
    ||||| |||||    
T  32562360 aagtgtttaaa 32562350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 34232813 - 34232672
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaact-taccattt 256  Q
    ||||||||||   ||||||| |||||||||||| ||||||| ||||||||||||| ||||||  |||| ||||||||     ||||||| |  || ||||    
T  34232813 tttaagcatccttaatttagcaattattcttttaaaaagtcaactattacaattttcaatgctttcaatacacaact-----ttaaaaagtcaactattt 34232719  T
Q  257 aaagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    || |||||||||||||||  |  ||||||||||||||||||||||||    
T  34232718 aaggtgcttaaagagtgttccgagggcactcgttaacatttccctta 34232672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 38491232 - 38491309
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaa 246  Q
    ||||||||||||||||| | || ||||||| ||||||||||||| ||||||| |||| |||||| |||||||||||||    
T  38491232 caaatttagtaattattatgttaaaaagtcaactattacaatttacaatgcattcaatacacaatttttcattaaaaa 38491309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 48022459 - 48022351
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| || |||||||||||||| |||| ||||||  |||||| |||||| ||||||| |||| ||| |  |||| ||||||||||||| |||||    
T  48022459 tttaagcatcccatatttagtaattattgttttaaaaagttaactattgcaattttcaatgcattcaatacatatttttttattaaaaacttactattta 48022360  T
Q  258 aagtgctta 266  Q
    || ||||||    
T  48022359 aaatgctta 48022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 586 - 672
Target Start/End: Original strand, 50306240 - 50306327
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  50306240 ataaatcaaacatgtcgtagatccgattataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 50306327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 295
Target Start/End: Original strand, 44329484 - 44329601
Alignment:
Q  178 taattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcac 277  Q
    ||||||||||||| ||||||| | ||||| ||||| || |||| | || | | ||||||| |||||||| ||   ||||||||||||||||||||||||     
T  44329484 taattattcttttaaaaagtcaattattataattttcagtgcatttaatatataactttttattaaaaattttatatttaaagtgcttaaagagtgtcat 44329583  T
Q  278 aggggcactcgttaacat 295  Q
     ||||||||||| |||||    
T  44329584 gggggcactcgtaaacat 44329601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 1078069 - 1078174
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  1078069 agaggctatggtccccaatacaccgtacacggcaatactctctcttctcaccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 1078168  T
Q  450 atcagc 455  Q
    ||||||    
T  1078169 atcagc 1078174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 587 - 670
Target Start/End: Original strand, 1078276 - 1078360
Alignment:
Q  587 taaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |  | || ||| ||||||||| |||||||    
T  1078276 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattaataattgttgaacatgt 1078360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 40460829 - 40460725
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||| ||||||||| ||| |||| || | ||||||| ||||||||  | |||| | |||| |||||||||||||||||| |||||    
T  40460829 tttaagcatccaaaatttaataattattcatttaaaaaatcaattattacagtttccaatttattcaatatacaatttttcattaaaaacttactattta 40460730  T
Q  258 aagtg 262  Q
    |||||    
T  40460729 aagtg 40460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 302
Target Start/End: Original strand, 3982275 - 3982408
Alignment:
Q  168 tcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaa 267  Q
    |||||||||||||||||| ||   ||||||| ||||||| |||||  |||||| | || | ||||||||| | |||||| |||| |||||||||| ||||    
T  3982275 tcaaatttagtaattatttttagaaaaagtcaactattataatttataatgcattgaatagacaactttt-aataaaaatttactatttaaagtgtttaa 3982373  T
Q  268 agagtgtcacagg-ggcactcgttaacatttccctt 302  Q
    |||||| ||| || | ||||||||||||||||||||    
T  3982374 agagtg-caccggagacactcgttaacatttccctt 3982408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 24964231 - 24964168
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaa 112  Q
    |||||||||||||||| |||||||||| |   |||||||||||||||||||| |||||||||||    
T  24964231 ataataattatattagctatttatcaatttgaagccttaattgattagtgatcaaattaagtaa 24964168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 31058095 - 31058150
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  31058095 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 31058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 8093124 - 8093050
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttca 481  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||||  ||| |||||||||    
T  8093124 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaacctagttgtttgtttca 8093050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 8365515 - 8365603
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaa 258  Q
    ||||||| ||||||||||||| |||| || ||||||||||| | ||||||| |||| |||  | |||||| ||||||||||| ||||||    
T  8365515 aaatttaataattattcttttaaaaaatcaactattacaatcttcaatgcattcaatacatcatttttcaataaaaacttactatttaa 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 18433048 - 18432920
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||||||||||||||||| ||| ||  ||| |||||||||  |||| | |||| | ||||||||||||||| || |||  |||||||  |||||||    
T  18433048 caaatttagtaattattcttttaaaatgttaactgttacaatttttaatgtattcaatatacaacttttcattaagaatttaatatttaaacggcttaaa 18432949  T
Q  269 gagtgtcacaggggcactcgttaacattt 297  Q
    || |  | ||||| |||||||||| ||||    
T  18432948 gattacctcagggacactcgttaatattt 18432920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 39914711 - 39914604
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  ||||||||  |||| ||||||| ||||||| ||||||||||||| ||||||| |||| ||   |||||| || |||||| ||| | |||    
T  39914711 tttaagcataccaaatttaacaattgttcttttaaaaagtcaactattacaattttcaatgcactcaatac---acttttaataaaaaacctactaatta 39914615  T
Q  258 aagtgcttaaa 268  Q
    |||||||||||    
T  39914614 aagtgcttaaa 39914604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 12184143 - 12184080
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattga 92  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| |  |||||||||||||    
T  12184143 ttatgtgggcaaatatcgtaataataattatattagttatttatcaatttagagccttaattga 12184080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 31051595 - 31051650
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||||||||||||||    
T  31051595 ataaatcaaacatgtcgtagatccaatcataatcatgttcaatgttttgtttgctt 31051650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 52917087 - 52917165
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaactt 249  Q
    |||||||| ||||||||||| ||||||||| |||||| |||||||||| || | ||||||||  ||||||| ||||||||    
T  52917087 aaatttagcaattattcttt-caaaagtcgtctattagaatttccaatacattgaacacacagtttttcataaaaaactt 52917165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 2995065 - 2994937
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||||||||||| |||| ||||||  ||||||| ||||| ||||    | || ||||||||||| | ||||||||||| |||||||||| |||||     
T  2995065 aaatttagtaattattattttaaaaagtaaactattataattttcaattttgtaaatacacaacttttta-taaaaacttactatttaaagtgtttaaa- 2994968  T
Q  270 agtgtcacaggggcactcgttaacatttccc 300  Q
    || ||  | ||||||| ||||||||||||||    
T  2994967 agagtgccgggggcacgcgttaacatttccc 2994937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 8043878 - 8043935
Alignment:
Q  156 tgtttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttc 213  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||| ||||| ||||    
T  8043878 tgtttaagcatcctaaatttaataattattcttttaaaaagtcgactgttacagtttc 8043935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 42791248 - 42791131
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||| |||||||  ||||||| |||| ||||||| ||||| || ||||  |||||| |||| ||||| ||||| ||  |||| |||| |||||    
T  42791248 tttaagcatcttaaatttaacaattatttttttaaaaagtcaactatcactattttaaatgcattcaatacacagctttttatataaaatttactattta 42791149  T
Q  258 aagtgcttaaagagtgtc 275  Q
    || | |||||| ||||||    
T  42791148 aaatacttaaaaagtgtc 42791131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 672
Target Start/End: Original strand, 44409997 - 44410148
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccga 611  Q
    ||||||||||||| |||| ||  |||||| |||||||||||||||  |||||||||  | ||||||        |||||||||| |||||||| |||||     
T  44409997 tgttgagagggctgccataaaagctttatccaggtattcctaata--ctaattcttgatatccttg--------ataaatcaaacatgtcgtagatccgt 44410086  T
Q  612 tcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||| | || ||||||||||||||||||| |  | || ||||||||| ||| |||||||||    
T  44410087 tcatatttatgttcaatgttttgtttgcttccgctattgattcataatcgttgaacatgttt 44410148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 604508 - 604444
Alignment:
Q  187 ttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    |||| ||||||| | ||||| ||||||||||||| |||| |||||| |||||||||| |||||||    
T  604508 ttttaaaaagtcaattattataatttccaatgcactcaatacacaatttttcattaagaacttac 604444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 31057769 - 31057829
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||    
T  31057769 ttaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccatta 31057829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 640
Target Start/End: Original strand, 27955216 - 27955267
Alignment:
Q  590 atcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||| |||| ||| |||||||||||||||| |||||||||||||||||||    
T  27955216 atcaaacatgttgtagatccgatcataatcatgttcaatgttttgtttgctt 27955267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 34046448 - 34046500
Alignment:
Q  250 accatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaa 304  Q
    |||||||  |||||||||||||||||   ||||||||||||||||||||||||||    
T  34046448 accattttgagtgcttaaagagtgtcc--ggggcactcgttaacatttcccttaa 34046500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 466
Target Start/End: Original strand, 44409882 - 44409941
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaacc 466  Q
    ||||||| |||||||||||| |||| ||||||| ||||| ||||||||||  ||||||||    
T  44409882 aagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaacc 44409941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 397
Target Start/End: Original strand, 50306022 - 50306057
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaa 397  Q
    ||||||||||||||||||||||| ||||||||||||    
T  50306022 agaggctatggtccccaatacaccgtacacggcaaa 50306057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 586 - 659
Target Start/End: Complemental strand, 12183692 - 12183618
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataatt 659  Q
    |||||||||| |||||||| |||| |||||||| || |||||| |||||||||||| || | || ||||||||||    
T  12183692 ataaatcaaacatgtcgtagatccaatcataattatgttcaatattttgtttgcttccactattgattcataatt 12183618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 31051426 - 31051484
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| ||||||||| || ||||| ||||||||||  |||||||    
T  31051426 aagagaacttgaggcataaaggtaccggttaaggaagaaccaaatcagccgccgctaac 31051484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 640
Target Start/End: Complemental strand, 8092997 - 8092899
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||| |||||| |||||||  | |||||||||||||||        | ||||| || |||||||||||||||| |||||||||||     
T  8092997 ctttatccaggtattcctcatacccaaattcttaatatccttgataaatcaa--------acatgtcatagatccgatcataatcatgttcaatgtttta 8092906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 14758629 - 14758701
Alignment:
Q  228 cacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    ||||| ||||||| ||||| |||| ||||||||| |||||||||||||    | ||||||||||||||||||||    
T  14758629 cacaatttttcat-aaaaatttactatttaaagtccttaaagagtgtccttagagcactcgttaacatttccct 14758701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 36321637 - 36321580
Alignment:
Q  253 atttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaat 310  Q
    ||||| ||| ||||||||||| | || || ||||||||||||||||||| ||||||||    
T  36321637 atttatagtccttaaagagtgccccaaggacactcgttaacatttccctaaattaaat 36321580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 39156268 - 39156235
Alignment:
Q  261 tgcttaaagagtgtcacaggggcactcgttaaca 294  Q
    ||||||||||||||| ||||||||||||||||||    
T  39156268 tgcttaaagagtgtctcaggggcactcgttaaca 39156235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 7e-39; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 42636472 - 42636330
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| ||||||||||||||||| ||   ||||||| ||||||||||||| ||||||| | || |||||||||||||||||||||||||||||||    
T  42636472 tttaagcatcccaaatttagtaattattattcaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattta 42636373  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||||||||||||||   | || |||||||||||||||||||    
T  42636372 aagtgcttaaagagtgctccgggagcactcgttaacatttccc 42636330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 27801320 - 27801187
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||  ||||||||||| ||||||||||||| |||||||||||||||||    
T  27801320 aaatttagtaattattcttttaaaaagtcaactattacaattttcaatgcattcattacacaactttttattaaaaacttactatttaaagtgcttaaag 27801221  T
Q  270 agtgtcacaggggcactcgttaacatttccctta 303  Q
    |||  | || | ||||||||||||||||||||||    
T  27801220 agtaccccaagagcactcgttaacatttccctta 27801187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 28207624 - 28207776
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| ||||||||  ||| |||||||| ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  28207624 tttaagcatcccaaatttaacaataattcttttaaaaagtcaactattacaatttccaatgcattcaatacacaacttttcattaaaaactttccattta 28207723  T
Q  258 aa-gtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaat 310  Q
    || ||||||||||||||| |  |||  |||||||||||||||||||||| ||||    
T  28207724 aaggtgcttaaagagtgt-aaggggatactcgttaacatttcccttaataaaat 28207776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 159 - 310
Target Start/End: Original strand, 1135162 - 1135313
Alignment:
Q  159 ttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaa 258  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||| | |||| | |||||||||| |||||||||||||||||||    
T  1135162 ttaagcatctcgaatttagtaattattcttttaaaaagtcaactattacaattttcaatgtattcaatatacaacttttccttaaaaacttaccatttaa 1135261  T
Q  259 agtgcttaaagagtg-tcacaggggcactcgttaacatttcccttaattaaat 310  Q
    |||| |||||||||| ||  |  ||||||||||||||||||| ||||||||||    
T  1135262 agtgtttaaagagtgctctga-cggcactcgttaacatttcctttaattaaat 1135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 158 - 298
Target Start/End: Original strand, 33013045 - 33013184
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  ||||||||  |||||||||||| ||||||| ||||||||||||||||||| | |||| |||||||||||||| || ||||||| | |||    
T  33013045 tttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaatttccaatgtactcaatacacaacttttcataaagaacttactaatta 33013144  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    |||||||||||||||| | |||| |||||||||||||||||    
T  33013145 aagtgcttaaagagtg-cccaggagcactcgttaacatttc 33013184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 170 - 301
Target Start/End: Complemental strand, 4384229 - 4384099
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||| |||| ||||||| |||||||||||| ||| ||||||||||||||||||    
T  4384229 aaatttagtaattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaac-tttcattaaaaatttatcatttaaagtgcttaaag 4384131  T
Q  270 agtgtcacaggggcactcgttaacatttccct 301  Q
    |||||| |  |  ||||||||||| |||||||    
T  4384130 agtgtcccgagaacactcgttaacgtttccct 4384099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 42033432 - 42033530
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||| |||||||||||||||    
T  42033432 aataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggttattagatttctaattagataattaattaaa 42033530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 169 - 301
Target Start/End: Original strand, 37427199 - 37427333
Alignment:
Q  169 caaatttagtaattattcttttcaaaag---tcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgctt 265  Q
    |||||||||||||||||||||| ||||    || | ||||||||||| ||||| |||||| || |||||||||||||||| |||||||||||||||||||    
T  37427199 caaatttagtaattattcttttaaaaaaaaatcaattattacaattttcaatgtaatcaatactcaacttttcattaaaatcttaccatttaaagtgctt 37427298  T
Q  266 aaagagtgtcacaggggcactcgttaacatttccct 301  Q
    |||||||||| | | |||||||||||||||||||||    
T  37427299 aaagagtgtc-cggaggcactcgttaacatttccct 37427333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 10699642 - 10699762
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||| ||||    
T  10699642 ttatgtgggcaaatatcgtaacaataattatactagttatttatcaattgtgagccttaattgattagtgatcaaattaagtaattaggctattagattt 10699741  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  10699742 ctaattggataattaattaaa 10699762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 39727831 - 39727711
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| |||||||||||||||    
T  39727831 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagacttagttgattagtgatcaaattaagtaataaggctattaaattt 39727732  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  39727731 ctaattggataattaattaaa 39727711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 39736085 - 39735965
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| |||||||| | ||| |||||||||||||| |||||||||| ||||||| ||| |||||||||||| ||||||||||| |||||||||| ||||    
T  39736085 ttatgtggacaaatatcgtaacaataattatattagctatttatcaattgtgagcattagttgattagtgatcaaattaagtaataaggctattagattt 39735986  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  39735985 ctaattggataattaattaaa 39735965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 5542495 - 5542183
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  5542495 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 5542396  T
Q  450 atcagccatcgctaaccctgttctttgtttcatata---tcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| ||    || |||||  | |||| |||| |||    |||||||||| || ||||  ||||||  ||||    
T  5542395 atcagccgccgctaactctattgtgtgtttcagatcatctcccctctttggttatcgttgttga----tgagagggctgccttgaaagctttatctaggt 5542300  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  5542299 attcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 5542208  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||||||||||| |||||||    
T  5542207 attgattcataattgttgaacatgt 5542183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 14417592 - 14417691
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||| |||||||||| |||||||||  |||||||||||    
T  14417592 taataataattatattagttatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaatt 14417691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 158 - 297
Target Start/End: Complemental strand, 2258197 - 2258058
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||| ||||||||||||| ||||||  |  ||||||||||  |||| | | || ||||||||||||||| |||||||||||||||    
T  2258197 tttaagcatcccaaatttaataattattcttttaaaaagttaatcattacaatttttaatgtatttaatacacaacttttcatttaaaacttaccattta 2258098  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    ||||||||||||| |||| | || ||||||| ||||||||    
T  2258097 aagtgcttaaagattgtcccgggtgcactcgataacattt 2258058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 159 - 298
Target Start/End: Original strand, 3146037 - 3146178
Alignment:
Q  159 ttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatg----caatcaacacacaacttttcattaaaaacttaccat 254  Q
    ||||||||| || ||||||||||||||||||| ||||||  |||||||||||||||||||    || ||||  |||| | ||||||||||||||||| ||    
T  3146037 ttaagcatcccatatttagtaattattcttttaaaaagttaactattacaatttccaatgcattcattcaatgcacaccgtttcattaaaaacttactat 3146136  T
Q  255 ttaaagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||    
T  3146137 ttaaagtgcttaaagagtgtc-cgggggcactc-ttaacatttc 3146178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 33949656 - 33949515
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | ||||||||||| |||| |||| |||| || |||||||||||||| |||||| |||| |||||||||||||| || ||||||| | |||    
T  33949656 tttaagcatattaaatttagtaagtattgttttaaaaattcaactattacaatttcaaatgcactcaatacacaacttttcataaataacttactaatta 33949557  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||| |||||||||||| | |||||||| ||||| |||||||    
T  33949556 aagtgtttaaagagtgtctc-ggggcacttgttaatatttccc 33949515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 42993537 - 42993455
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  42993537 caaatatcgtaataataattatattagttatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 42993455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 12829977 - 12829835
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||| ||||||| |||||||| |||| ||||||| | ||||||||||  ||||||| |||| | | || ||||||||||||||||||||||||    
T  12829977 tttaagcatctaaaatttaataattattattttaaaaagtctattattacaattaacaatgcattcaatatataatttttcattaaaaacttaccattta 12829878  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||||||||| |||||    || |||||||||||||||||||||    
T  12829877 aagtgcttaaa-agtgt-ttgggagcactcgttaacatttccctt 12829835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 362 - 670
Target Start/End: Original strand, 32890713 - 32891025
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  32890713 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 32890812  T
Q  450 atcagccatcgctaaccctgttctttgtttcatata---tcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| ||    ||| ||||  | |||| |||| |||    |||||||| | || ||||  |||||| |||||    
T  32890813 atcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttattgttgttga----tgagagggttgccttgaaagctttatccaggt 32890908  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||| ||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  32890909 attcctaataccctaattcttaatatccttggtaaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 32891000  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||||||||||| |||||||    
T  32891001 attgattcataattgttgaacatgt 32891025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 32896625 - 32896716
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  32896625 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 32896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 1369965 - 1369824
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||||||| |||||||||||| ||||||| ||||| ||||||||||||||| |||| | | ||||||||||  ||||||||  | |||    
T  1369965 tttaagcatcctaaatttagcaattattcttttaaaaagtcaactatcacaatttccaatgcattcaatagataacttttcatataaaacttattaatta 1369866  T
Q  258 aagtgcttaaagagtgtcacagg-ggcactcgttaacatttcc 299  Q
    |||||||||||||||||| ||||  ||||| ||||||||||||    
T  1369865 aagtgcttaaagagtgtc-caggaagcacttgttaacatttcc 1369824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 10705473 - 10705571
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||  |||||| |||||||||   |||||||||||||    
T  10705473 aataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaaactattagatttctaattgaataattaattaaa 10705571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 36356058 - 36355925
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| ||| |||||| ||||||||||||||| ||||     ||||| ||||||| |||||| | || |||||||||||||||||||||||||||||||    
T  36356058 tttaagaatcccaaattaagtaattattcttttaaaaa-----ctattgcaatttctaatgcatttaatacacaacttttcattaaaaacttaccattta 36355964  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatt 296  Q
    |||| |||||| |||||| ||   |||||||||||||||    
T  36355963 aagtacttaaatagtgtcccacatgcactcgttaacatt 36355925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 5542708 - 5542587
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct-attaaatt 127  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||| ||| || |||| |||    
T  5542708 ttatgtgggcaaatatcgtaataataattatattagttatttatcaatttagagccttaattgattagtgatcaaattaagtaataagactaattagatt 5542609  T
Q  128 tctaatgagataattaattaaa 149  Q
    ||||||  ||||| ||||||||    
T  5542608 tctaattggataaataattaaa 5542587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 36818585 - 36818673
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaagg 117  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  36818585 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataagg 36818673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 32890501 - 32890592
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||    
T  32890501 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgacccttaattgattagtgatcaaattaagtaataaggcta 32890592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 362 - 670
Target Start/End: Original strand, 32896837 - 32897149
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  32896837 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 32896936  T
Q  450 atcagccatcgctaaccctgttctttgtttcatata---tcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| ||    ||| ||||  | |||| |||| |||    |||||||| |  | ||||  |||||| |||||    
T  32896937 atcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttattgttgttga----tgagagggttgtcttgaaagctttatccaggt 32897032  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||| ||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  32897033 attcctaataccctaattcttaatatccttggtaaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 32897124  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||||||||||| |||||||    
T  32897125 attgattcataattgttgaacatgt 32897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 9934914 - 9934979
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaa 112  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  9934914 taataataattatattagttatttatcaattgtgagtcttaattgattagtgatcaaattaagtaa 9934979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 536 - 672
Target Start/End: Original strand, 9935288 - 9935417
Alignment:
Q  536 tttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgt 634  Q
    ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| |||||||||||||    
T  9935288 tttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatattcaatgttttgt 9935379  T
Q  635 ttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||| |  | || ||||||||||||| |||||||||    
T  9935380 ttgcttccgctattgattcataattgttgaacatgttt 9935417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 22220274 - 22220154
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||| ||||||||| ||||||||||  || ||||||| |||||||||||| ||||||||||| |||| ||||| ||||    
T  22220274 ttatgtgggcaaatatcgtaacaatagttatattagctatttatcaatcgtaagccttagttgattagtgatcaaattaagtaataagggtattagattt 22220175  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  22220174 ctaattggataattaattaaa 22220154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 171 - 298
Target Start/End: Original strand, 24695760 - 24695886
Alignment:
Q  171 aatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgctt-aaag 269  Q
    ||||||||||||||| |||| ||||||| |||||||||||||| |||||| | || ||||||||||| ||| ||||||||| |||||||||| || ||||    
T  24695760 aatttagtaattattattttaaaaagtcaactattacaatttctaatgcagtgaatacacaactttttatt-aaaacttactatttaaagtgtttaaaag 24695858  T
Q  270 agtgtcacaggggcactcgttaacatttc 298  Q
    ||||||  |||||||| | ||||||||||    
T  24695859 agtgtc-taggggcacgcattaacatttc 24695886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 172 - 268
Target Start/End: Original strand, 35901945 - 35902041
Alignment:
Q  172 atttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    ||||| |||||||| |||| ||||||| | ||||||||||||||||||| |||| ||| ||||||||||||||||||||  ||||||| ||||||||    
T  35901945 atttaataattatttttttaaaaagtcaattattacaatttccaatgcattcaatacagaacttttcattaaaaacttattatttaaaatgcttaaa 35902041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 158 - 302
Target Start/End: Complemental strand, 16723301 - 16723169
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| ||||||| |||||||||||||| |||| || |||| |||||||| |||| || |||||||||||||          ||  |||||||||    
T  16723301 tttaagcatcccaaattttgtaattattcttttaaaaaatcaactaatacaattttcaatacattcaacacacaact----------aa--taccattta 16723214  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||    
T  16723213 aagtgcttaaaaagtgtctcgggggcactcgttaacatttccctt 16723169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 12954734 - 12954867
Alignment:
Q  164 catctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgc 263  Q
    |||||||||||||||||||||| |||| |||| || ||||||| ||||| ||||  | | || |||||| |||||| |||||| ||| |||||||||| |    
T  12954734 catctcaaatttagtaattattttttttaaaaatcaactattataattttcaatagatttaatacacaatttttcaataaaaatttatcatttaaagtac 12954833  T
Q  264 ttaaagagtgtcacaggggcactcgttaacattt 297  Q
     ||||||||||| | | | |||||||||||||||    
T  12954834 ataaagagtgtctcggagacactcgttaacattt 12954867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 586 - 670
Target Start/End: Original strand, 36819022 - 36819107
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| || | || ||||||||||||| |||||||    
T  36819022 ataaatcaaacatgtcgtagatccgatcataatcatattcaatgttttgtttgcttccactattgattcataattgttgaacatgt 36819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 640
Target Start/End: Original strand, 14417766 - 14418047
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  14417766 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaacgtaccggttgaggaagaaccaa 14417864  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||  || || | ||||||| || |||  |||||  |  |||| || | ||| |    |||||||| | |||||  |||||| |||||    
T  14417865 atcagccgccgctaaaactattgtgtgtttcagatcatcttctctctttggttatcgtcgttgatt----agagggctgctatgaaagctttatccaggt 14417960  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| |||||||||||||||||||    
T  14417961 attcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 14418047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 1883375 - 1883264
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggc-tattaaatttctaatgag 136  Q
    |||||| | |||||||||||||||||| |||||||||| |  |||||||| |||||||||||| ||||||||||| ||||| ||||| ||||||| | ||    
T  1883375 caaatatcgtaataataattatattagctatttatcaatttggagccttacttgattagtgatcaaattaagtaataaggcttattagatttctatttag 1883276  T
Q  137 ataattaattaa 148  Q
    |  |||||||||    
T  1883275 aatattaattaa 1883264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 167950 - 167857
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    |||||| ||||||||||||  |||||||||||| ||||||| ||||||| ||||||||||||| | |  ||| ||||||||||| |||||||||    
T  167950 tttaagtatctcaaatttaaaaattattcttttaaaaagtcaactattataatttccaatgcatttattacataacttttcatttaaaacttac 167857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 586 - 670
Target Start/End: Complemental strand, 14799524 - 14799439
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  14799524 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 14799439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 586 - 670
Target Start/End: Complemental strand, 42993112 - 42993027
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  42993112 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 42993027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 37813509 - 37813410
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaa-gtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattt 256  Q
    |||||| ||| |||||||||||||||||||||| |||| ||| || |||||||||||||||||| | || ||||||||||||||   |||||||| ||||    
T  37813509 tttaaggatcccaaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcat---aaacttactattt 37813413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 12684600 - 12684490
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  |||||||| ||||||||||||  || | || |||||||||||||| |||||| |||  ||| ||||||| |||||||| |||  |||||    
T  12684600 tttaagcattccaaatttaataattattctttcaaagaatcaactattacaatttctaatgcattcattacaaaacttttaattaaaaatttattattta 12684501  T
Q  258 aagtgcttaaa 268  Q
    |||||||||||    
T  12684500 aagtgcttaaa 12684490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 274
Target Start/End: Original strand, 884428 - 884532
Alignment:
Q  170 aaatttagtaattattcttttcaaaag-tcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    ||||||||||||||||||| | ||||  || | ||||||||||| ||||| | | || |||||| |||||||||||||||| | ||||||||||||||||    
T  884428 aaatttagtaattattcttataaaaaaatcaattattacaattttcaatg-atttaatacacaatttttcattaaaaactttcaatttaaagtgcttaaa 884526  T
Q  269 gagtgt 274  Q
    ||||||    
T  884527 gagtgt 884532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 587 - 670
Target Start/End: Original strand, 7771284 - 7771368
Alignment:
Q  587 taaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |  | || ||| ||||||||| |||||||    
T  7771284 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgt 7771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 17081470 - 17081394
Alignment:
Q  165 atctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcatt 241  Q
    ||||||||||||| ||||||| |||  ||||||| |||||||||||||| |||||||| ||  ||||||||||||||    
T  17081470 atctcaaatttagcaattattttttaaaaaagtcaactattacaatttctaatgcaatgaatgcacaacttttcatt 17081394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 22220062 - 22219956
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  22220062 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 22219963  T
Q  450 atcagcc 456  Q
    |||||||    
T  22219962 atcagcc 22219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 3520894 - 3520822
Alignment:
Q  178 taattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaactta 250  Q
    ||||||||||||| |||| || ||||||||| |||  |||||| |||| ||| ||||||||||||||||||||    
T  3520894 taattattcttttaaaaaatcaactattacagtttttaatgcattcaatacataacttttcattaaaaactta 3520822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 26750626 - 26750694
Alignment:
Q  234 ttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||||||||| ||||| |||||||||||||||||||||   |  | |||||||||||||||||||||    
T  26750626 ttttcattaaaatcttactatttaaagtgcttaaagagtgctccgagcgcactcgttaacatttccctt 26750694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 471
Target Start/End: Original strand, 42033682 - 42033746
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgtt 471  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  |||||||| ||||    
T  42033682 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaaccgtgtt 42033746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 2888825 - 2888729
Alignment:
Q  159 ttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatg----caatcaacacacaacttttcattaaaaacttac 251  Q
    ||||||||| || |||||||||||||| |||| ||||||  ||||||| |||||||||||    || ||||  |||||| |||||||||||||||||    
T  2888825 ttaagcatcccatatttagtaattatttttttaaaaagttaactattataatttccaatgcattcattcaatgcacaacgtttcattaaaaacttac 2888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 610 - 672
Target Start/End: Complemental strand, 39727404 - 39727341
Alignment:
Q  610 gatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||||| ||||||||||||||||||| | || || ||||||||||||| |||||||||    
T  39727404 gatcataatcatgttcaatgttttgtttgcttccgttattgattcataattgttgaacatgttt 39727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 39735818 - 39735751
Alignment:
Q  415 ttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccc-tgttctttgtttca 481  Q
    |||||||||||||||||| ||| || ||||||||||||||||  ||||||||| |||| |||||||||    
T  39735818 ttgaggcataaatgtaccagttaaggaagaatcaaatcagccgccgctaacccttgttgtttgtttca 39735751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 45365390 - 45365457
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaag 116  Q
    |||||||||||||||||||| |||||  | |||| ||| |||||||||||||| |||||| |||||||    
T  45365390 ataataattatattagttatctatcatatatgagtcttgattgattagtgattgaattaactaacaag 45365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 42993281 - 42993207
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttca 481  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||| || || | |||||||    
T  42993281 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 42993207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 45197449 - 45197519
Alignment:
Q  230 caacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||||||||| ||||| |||| |||||| ||| ||||||||||||   | ||||||||||||||||||||    
T  45197449 caacttttcataaaaaatttactatttaatgtgtttaaagagtgtcctggaggcactcgttaacatttccc 45197519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 304
Target Start/End: Original strand, 12782798 - 12782922
Alignment:
Q  179 aattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcaca 278  Q
    |||||||||||  |||||| || |||| | |||||||||||||| ||||||||  |||||| |||| | |||||| ||| ||| |||||  | |||| |     
T  12782798 aattattctttaaaaaagttgaatatttcgatttccaatgcaattaacacacacattttca-taaatatttaccacttatagtccttaactaatgtccct 12782896  T
Q  279 ggggcactcgttaacatttcccttaa 304  Q
    |||||||| |||||||||| ||||||    
T  12782897 ggggcactagttaacattttccttaa 12782922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 17954129 - 17954190
Alignment:
Q  39 aaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgat 100  Q
    ||||| ||| |||||||||||||||| |||||||||| |  ||| |||||||||||||||||    
T  17954129 aaatatctttataataattatattagctatttatcaatttggagacttaattgattagtgat 17954190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 10699754 - 10699814
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||    
T  10699754 ttaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccatta 10699814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 586
Target Start/End: Complemental strand, 22219861 - 22219817
Alignment:
Q  542 caggtattcctaataccctaattctttgtctccttgataaatcaa 586  Q
    ||||||||||||||||||||||||||  | |||||||||||||||    
T  22219861 caggtattcctaataccctaattcttaatatccttgataaatcaa 22219817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 32959844 - 32959776
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaa 309  Q
    ||||||||||| ||| ||  ||||||||||||| |||| || |||||||||| ||||| ||||||||||    
T  32959844 taaaaacttactattaaagatgcttaaagagtgccacatggacactcgttaatatttctcttaattaaa 32959776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 33067531 - 33067603
Alignment:
Q  187 ttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaa 259  Q
    |||| ||||||| | ||||||||| || |||||| |||| ||| ||||||||||| ||||||||| |||||||    
T  33067531 ttttaaaaagtcaattattacaatgtctaatgcattcaatacaaaacttttcatttaaaacttactatttaaa 33067603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 36818855 - 36818911
Alignment:
Q  409 gagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||| |||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  36818855 gagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 36818911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 39727719 - 39727679
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagtg 341  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  39727719 ttaattaaatatttaattaattgatatggactcaatgagtg 39727679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 5542594 - 5542535
Alignment:
Q  302 taattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    |||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||    
T  5542594 taattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccatta 5542535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 632
Target Start/End: Original strand, 10700080 - 10700127
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgtttt 632  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||    
T  10700080 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 2250356 - 2250414
Alignment:
Q  160 taagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatg 218  Q
    |||||||| |||||||| ||||||||||||| ||||||| || |||| ||||| |||||    
T  2250356 taagcatcccaaatttaataattattcttttaaaaagtcaaccattataattttcaatg 2250414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 10699919 - 10699969
Alignment:
Q  415 ttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    |||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  10699919 ttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 10699969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 10705719 - 10705777
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| || || |||||| |||||||||||| ||||||||||||||||  |||||||    
T  10705719 aagagaacttaagccataaaggtaccggttgaggaagaatcaaatcagccgccgctaac 10705777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 2072381 - 2072465
Alignment:
Q  174 ttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaa 259  Q
    ||||||||||||||||| ||||||| || ||||||| ||| ||| || | || ||| || ||||||| |||| |||||||||||||    
T  2072381 ttagtaattattcttttaaaaagtcaaccattacaacttctaatacatttaatacataa-ttttcataaaaatcttaccatttaaa 2072465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 5588977 - 5589022
Alignment:
Q  175 tagtaattattcttttcaaaagtcgactattacaatttccaatgca 220  Q
    |||||||||||||||| ||||||| ||||||| ||||| |||||||    
T  5588977 tagtaattattcttttaaaaagtcaactattataattttcaatgca 5589022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 9735398 - 9735309
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaa 259  Q
    ||||||| |||||||| |||  ||||||| |||||||  | || |||| || | || |||||||||||||||||||| ||| ||||||||    
T  9735398 aaatttaataattattttttaaaaaagtcaactattatgactttcaatacatttaatacacaacttttcattaaaaatttatcatttaaa 9735309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 9935160 - 9935209
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagcc 456  Q
    ||||||| |||||||||||| |||||| ||||| ||||| ||||||||||    
T  9935160 aagagaacttgaggcataaaggtaccgattgaggaagaaccaaatcagcc 9935209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 31265004 - 31264971
Alignment:
Q  261 tgcttaaagagtgtcacaggggcactcgttaaca 294  Q
    ||||||||||||| ||||||||||||||||||||    
T  31265004 tgcttaaagagtgccacaggggcactcgttaaca 31264971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 294
Target Start/End: Complemental strand, 37426426 - 37426393
Alignment:
Q  261 tgcttaaagagtgtcacaggggcactcgttaaca 294  Q
    ||||||||||||||| ||||||||||||||||||    
T  37426426 tgcttaaagagtgtcccaggggcactcgttaaca 37426393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 468
Target Start/End: Complemental strand, 39727578 - 39727525
Alignment:
Q  415 ttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccct 468  Q
    |||||||||||| |||||||||||| ||||| |||||||||   ||||||||||    
T  39727578 ttgaggcataaaggtaccggttgaggaagaaccaaatcagcagccgctaaccct 39727525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 3e-35; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 10244669 - 10244355
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| ||||||||||||||||||||||||| ||||| |||    
T  10244669 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaatgtaccggttgaggaagaaccaa 10244570  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | |||||||||| ||| ||||||  |  |||| |||| |||    ||||||||||  | ||||  |||||| |||||    
T  10244569 atcagccgccgctaactctattgtgtgtttcatatcatctcctctctttggttatcgttgttga----tgagagggctgtcttgaaagctttatccaggt 10244474  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  10244473 attcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 10244382  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||||||||||||| |||||||||    
T  10244381 attgattcataattgttgaacatgttt 10244355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 362 - 676
Target Start/End: Complemental strand, 11840060 - 11839742
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  11840060 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 11839961  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  11839960 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgccttgaaagctttatccaggt 11839865  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  11839864 attcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 11839773  T
Q  646 gttaattcataattgttaaacatgtttcatg 676  Q
     || ||||||||||||| ||||||| |||||    
T  11839772 attgattcataattgttgaacatgtatcatg 11839742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 10238547 - 10238233
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| ||||||||||||||||||||||||| ||||| |||    
T  10238547 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaatgtaccggttgaggaagaaccaa 10238448  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat---atcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||||||   |||  ||||  | |||| |||| |||    ||||||||||  | ||||  |||||| |||||    
T  10238447 atcagccgccgctaactctattgtgtgtttcatatcatatcctctctttggttatcgttgttga----tgagagggctgtcttgaaagctttatccaggt 10238352  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||  | |||||||||||||||        | |||||||| ||| |||||||||||| ||||||||||||||||||| |  |    
T  10238351 attcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatctgatcataatcatgttcaatgttttgtttgcttccgct 10238260  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||||||||||||| |||||||||    
T  10238259 attgattcataattgttgaacatgttt 10238233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 10761197 - 10761077
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  10761197 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 10761098  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  10761097 ctaattggataattaattaaa 10761077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 10769516 - 10769396
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  10769516 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagattt 10769417  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  10769416 ctaattggataattaattaaa 10769396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 24644037 - 24643917
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||| |||||||||||||||| |||||| |||| |||||||||||| |||||||||||||||||||||| ||||    
T  24644037 ttatgtgggcaaatatcctaacaataattacattagttatttatcaattgtgagtcttagttgattagtgatcaaattaagtaacaaggctattagattt 24643938  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  24643937 ctaattggataattaattaaa 24643917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 53071789 - 53071681
Alignment:
Q  38 caaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgaga 137  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||    
T  53071789 caaatatcataacaataattatattagttatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagatttctaattgga 53071690  T
Q  138 taattaatt 146  Q
    |||||||||    
T  53071689 taattaatt 53071681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 42191555 - 42191243
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  42191555 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 42191456  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||| ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  42191455 atcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttga----tgagagggctgccttgaaagctttatccaggt 42191360  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatca-tttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  |  |||||        |||||||||| |||||||| |||||||||||||||  ||||||||||||||||||| |  |    
T  42191359 attcctaataccctaattcttaatacccttg--------ataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgct 42191268  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||| ||||||| |||||||    
T  42191267 attgattcacaattgttgaacatgt 42191243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 42197497 - 42197185
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  42197497 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 42197398  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||| ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  42197397 atcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttga----tgagagggctgccttgaaagctttatccaggt 42197302  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatca-tttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  |  |||||        |||||||||| |||||||| |||||||||||||||  ||||||||||||||||||| |  |    
T  42197301 attcctaataccctaattcttaatacccttg--------ataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgct 42197210  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||| ||||||| |||||||    
T  42197209 attgattcacaattgttgaacatgt 42197185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 407 - 670
Target Start/End: Original strand, 49151493 - 49151748
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    |||||||  ||||||||||| |||||||||||| ||||||||||||||||| ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  49151493 aagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatcg 49151592  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||  |||||| ||||||||| ||||||||||||||||  | |||||        ||||||||||| |||||||    
T  49151593 ttgttga----tgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatcctt--------aataaatcaaacatgtcgt 49151680  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  49151681 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 49151748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 407 - 670
Target Start/End: Original strand, 49157560 - 49157815
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    |||||||  ||||||||||| |||||||||||| ||||||||||||||||| ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  49157560 aagagaacgtgaggcataaaggtaccggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatcg 49157659  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||  |||||| ||||||||| ||||||||||||||||  | |||||        ||||||||||| |||||||    
T  49157660 ttgttga----tgagagggctgccttgaaagctttatccaggtattcataataccctaattcttaatatcctt--------aataaatcaaacatgtcgt 49157747  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||    
T  49157748 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgt 49157815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 38449610 - 38449490
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| |||||||||| ||||    
T  38449610 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataaggctattagattt 38449511  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  38449510 ctaattggataattaattaaa 38449490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 11846524 - 11846403
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct-attaaatt 127  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| |  |||||||||| |||||||||| ||||||||||| |||||| |||| |||    
T  11846524 ttatgtgggcaaatatcgtaataataattatattagttatttatcaatttagagccttaatggattagtgatcaaattaagtaataaggctaattagatt 11846425  T
Q  128 tctaatgagataattaattaaa 149  Q
    ||||||  ||||||||||||||    
T  11846424 tctaattggataattaattaaa 11846403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 23138963 - 23138843
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| ||| |||||| ||||    
T  23138963 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataagactattagattt 23138864  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  23138863 ctaattggataattaattaaa 23138843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 30051647 - 30051527
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| || | ||||| ||||    
T  30051647 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaagatattagattt 30051548  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  30051547 ctaattggataattaattaaa 30051527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 38456097 - 38455977
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| ||||||  ||| |||||||||||| ||||||||||| |||||||||| ||||    
T  38456097 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagtgttagttgattagtgatcaaattaagtaataaggctattagattt 38455998  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  38455997 ctaattggataattaattaaa 38455977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 11840272 - 11840181
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  11840272 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 11840181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 26429964 - 26429873
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  26429964 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 26429873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 42191767 - 42191676
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  42191767 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 42191676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 42197709 - 42197618
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  42197709 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 42197618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 42846112 - 42845974
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaa-tgcaatcaacacacaacttttcattaaaaacttaccattt 256  Q
    ||||||||||  ||||||||||||||||||||  ||||||| |||||| |||||| ||| |||| |||| |||||||||||||||||||||||| |||||    
T  42846112 tttaagcatcctaaatttagtaattattctttgaaaaagtcaactatttcaattttcaattgcattcaatacacaacttttcattaaaaacttatcattt 42846013  T
Q  257 aaagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    |     ||||||||||||||  || |||||| ||||||||||||    
T  42846012 a-----cttaaagagtgtcatgggagcactccttaacatttccc 42845974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 12086869 - 12086727
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||| ||| ||||||||||||||||||||||| ||||| |  |||||| ||||| || |||| |||| |||||  |||||||||||||||||| ||||     
T  12086869 tttaatcatttcaaatttagtaattattctttttaaaagacatctattataattttcagtgcattcaatacacattttttcattaaaaacttactatttc 12086770  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
     ||| |||||| |||||| |  |||||||||||||||||||||    
T  12086769 gagtacttaaatagtgtcccgagggcactcgttaacatttccc 12086727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 38455885 - 38455573
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  38455885 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 38455786  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| ||  |||  |||||| |||||    
T  38455785 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgcctcgaaagctttatccaggt 38455690  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||| ||| |||||||||||||||| ||||||||||||||||||| |  |    
T  38455689 attcctaataccctaattcttaatatccttgataaatcaa--------acatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 38455598  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||| ||||||||| |||||||    
T  38455597 attgatttataattgttgaacatgt 38455573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 49151247 - 49151345
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||| ||| |||||||||  ||||||||||||||    
T  49151247 aataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctgttagatttctaattggataattaattaaa 49151345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 49157314 - 49157412
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||| ||| |||||||||  ||||||||||||||    
T  49157314 aataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctgttagatttctaattggataattaattaaa 49157412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 29083990 - 29083865
Alignment:
Q  174 ttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttacca-tttaaagtgcttaaagagt 272  Q
    ||||||||||||||||| ||||||  |||||||||||||  |||||| | || ||||||||||||| ||||||||||| | |||||||||||||||||||    
T  29083990 ttagtaattattcttttaaaaagttaactattacaatttttaatgcatttaatacacaacttttcaataaaaacttactattttaaagtgcttaaagagt 29083891  T
Q  273 gtcacaggggcactcgttaacatttc 298  Q
     ||   | ||||||||||||||||||    
T  29083890 atcctggaggcactcgttaacatttc 29083865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 8331400 - 8331520
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| |||||||| | ||| |||||||||||||| |||||||||| ||||  ||||| |||||||||||| ||||||||||| |||| ||| | ||||    
T  8331400 ttatgtggacaaatatcgtaacaataattatattagctatttatcaattgtggaccttagttgattagtgatcaaattaagtaataaggatataagattt 8331499  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  8331500 ctaattggataattaattaaa 8331520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 672
Target Start/End: Original strand, 8331612 - 8331925
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  8331612 agaggctatggtccccaatacactgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 8331710  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||| | || ||| ||||||  |  |||| |||| |||     ||||||||| || ||||  |||||| |||||    
T  8331711 atcagccgccgctaactctattgtgtgttttagatcatctcctctctttggttatcgttgttgac----gagagggctgccttgaaagctttatccaggt 8331806  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  8331807 attcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 8331898  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||| ||||||||| |||||||||    
T  8331899 attgatttataattgttgaacatgttt 8331925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 28964493 - 28964613
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| ||||||| || ||||||||||| |||||||||||| ||||||||||| || | ||||| ||||    
T  28964493 ttatgtgggcaaatatcgtaacaataattatattagctatttataaattgtgagccttagttgattagtgatcaaattaagtaataaagttattagattt 28964592  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  28964593 ctaattggataattaattaaa 28964613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 51351289 - 51351421
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||| ||||||||||||| ||||||  | ||||| |||||||||| || | || |||||| ||||||||||||||||||  ||||||||||||||||    
T  51351289 aaatttaataattattcttttaaaaagtttagtattataatttccaatacatttaatacacaatttttcattaaaaacttactttttaaagtgcttaaag 51351388  T
Q  270 agtgtcacaggggcactcgttaacatttccctt 302  Q
    |||||| |||  |||  ||| ||||||||||||    
T  51351389 agtgtcccagaagcatccgtcaacatttccctt 51351421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 10238759 - 10238668
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||| |||||||    
T  10238759 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgttcaaattaagtaataaggcta 10238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 10244881 - 10244790
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||| |||||||    
T  10244881 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgttcaaattaagtaataaggcta 10244790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 17056338 - 17056247
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  17056338 ttatgtgggcaaatatcgtaataataattatattatctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 17056247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 55003948 - 55003857
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||| |  ||||||||||| ||||||||| ||||||||||| |||||||    
T  55003948 ttatgtggacaaatatcgtaataataattatattagttatttatcaatttagagccttaatttattagtgatcaaattaagtaataaggcta 55003857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 34300069 - 34300171
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||||||||||||||  |||||||||| ||||||  ||||||||||||| ||| |||||||||| ||| ||||||||||| ||||  |||||||||||    
T  34300069 taataataattatattaactatttatcaattgtgagaattaattgattagtaattgaattaagtaataagactattaaatttttaattggataattaatt 34300168  T
Q  147 aaa 149  Q
    |||    
T  34300169 aaa 34300171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 38449398 - 38449086
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  38449398 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 38449299  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| ||  |||   ||||| |||||    
T  38449298 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgcctcgaaagttttatccaggt 38449203  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||| ||| |||||||||||||||| ||||||||||||||||||| |  |    
T  38449202 attcctaataccctaattcttaatatccttgataaatcaa--------acatgttgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 38449111  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||| ||||||||| |||||||    
T  38449110 attgatttataattgttgaacatgt 38449086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 407 - 668
Target Start/End: Complemental strand, 17056071 - 17055818
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||| || || | ||||||| || ||| ||| ||  |  |||  |    
T  17056071 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctatctttggttaccg 17055972  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| ||| |    |||||||| | |||||  |||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  17055971 ttgttgatt----agagggctgctatgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 17055884  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacat 668  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||    
T  17055883 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacat 17055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 407 - 672
Target Start/End: Complemental strand, 30051380 - 30051123
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatgg 503  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||| || || | ||||||| || ||| ||||||   | |||| |    
T  30051380 aagagaacttgaggcataaaggtaccggttgaggaagaatcaaatcagccgtcgctaactctattgtgtgtttcagatcatctcctctctttggttattg 30051281  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    |||  ||    | ||||||||   |||||  |||||| ||||||||||||||||||||||||||  | ||||||        |||||||||| |||||||    
T  30051280 ttgtcga----ttagagggctgtaatgaaagctttatccaggtattcctaataccctaattcttaatatccttg--------ataaatcaaacatgtcgt 30051193  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | ||| ||| |||||||| |||||| |||||||||||| |  | || ||||||||||||| |||||||||    
T  30051192 agatctgattataatcatgttcaatattttgtttgcttccgctattgattcataattgttgaacatgttt 30051123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 407 - 670
Target Start/End: Complemental strand, 10760928 - 10760673
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| |||||||||||| |||| ||||||| ||||| |||||||| |  ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  10760928 aagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcg 10760829  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||||| || ||||  |||||| ||||||||||||||||||||||||||  | |||||||||||        ||||| |||||||    
T  10760828 ttgttga----tgagagggctgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaa--------tcaaacatgtcgt 10760741  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    | |||||||||||||||| ||||||||||| ||||||| |  | || ||| ||||||||| |||||||    
T  10760740 agatccgatcataatcatgttcaatgttttatttgcttccgctattgatttataattgttgaacatgt 10760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 48180277 - 48180132
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| | ||||||  |||||||||||| ||||||| ||||||||||||||||||||| |    || |||| |||||| |||||||||| |||||    
T  48180277 tttaagcatccccaatttaacaattattcttttaaaaagtcaactattacaatttccaatgcattggttacccaacatttcataaaaaacttactattta 48180178  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    ||||| | |||||||||  | | |  | ||||||||||||||||||    
T  48180177 aagtgataaaagagtgttccggagatattcgttaacatttccctta 48180132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 640
Target Start/End: Original strand, 34300482 - 34300603
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccga 611  Q
    ||||||||||| | |||||||  ||| || ||||||||||||||||||||||||||  | ||||| ||||        ||||||||||||||| ||||||    
T  34300482 tgttgagagggttgccatgaaagcttaattcaggtattcctaataccctaattcttaatatcctttataa--------atcaaatatgtcgtagatccga 34300573  T
Q  612 tcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||||||||||||||    
T  34300574 tcataatcatgttcaatgttttgtttgctt 34300603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 535 - 670
Target Start/End: Complemental strand, 10767022 - 10766894
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||| ||||| |||||||||| ||||||||||||    
T  10767022 ctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccggtcataatcatgttcaatgttttg 10766931  T
Q  634 tttgctttcattgttaattcataattgttaaacatgt 670  Q
    ||||||| |  |||| ||| ||||||||| |||||||    
T  10766930 tttgcttccgctgttgatttataattgttgaacatgt 10766894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 12109195 - 12109094
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    ||||||||||| ||||||||||||||||| ||||| | |||||||||||||||| ||||||||| | || | || ||| |||||||| |||||||| |||    
T  12109195 taataataattgtattagttatttatcaattgtgatctttaattgattagtgataaaattaagtgataatgtta-taagtttctaattagataattgatt 12109097  T
Q  147 aaa 149  Q
    |||    
T  12109096 aaa 12109094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 17602059 - 17601989
Alignment:
Q  50 taataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||| | ||||||||||| |||||||    
T  17602059 taataattatattagttatttatcaatttagagccttaattgattagtggtcaaattaagtaataaggcta 17601989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 16662992 - 16663115
Alignment:
Q  173 tttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgctt-aaagag 271  Q
    ||||||||||||| |||| ||||||| |||||||||||| |||||||| | || ||||||||||| | ||||||||||  |||||||||| || ||||||    
T  16662992 tttagtaattattattttaaaaagtcaactattacaattaccaatgcagtgaatacacaacttttta-taaaaacttattatttaaagtgtttaaaagag 16663090  T
Q  272 tgtcacaggggcactcgttaacattt 297  Q
    || | | ||||||| |||||||||||    
T  16663091 tg-ctcgggggcacgcgttaacattt 16663115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 158 - 298
Target Start/End: Original strand, 24791497 - 24791638
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaact---taccat 254  Q
    ||||||||||  |||||||||  |||||||||  ||||||| ||||||||||||| ||||| | |||| ||| ||||||||||||||||||   ||| ||    
T  24791497 tttaagcatcataaatttagtcgttattcttta-aaaagtcaactattacaattttcaatgtattcaatacataacttttcattaaaaacttagtactat 24791595  T
Q  255 ttaaagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    |||||||  ||||||||||||   | ||||||||||||||||||    
T  24791596 ttaaagtatttaaagagtgtc-tggaggcactcgttaacatttc 24791638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 40673446 - 40673543
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaa 267  Q
    ||||||| | ||||||||||| |||| || |||||||||||||| |||  | |||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  40673446 aaatttaatcattattcttttaaaaattcaactattacaatttctaatatattcaatacactacttttctttaaaaacttatcatttaaagtgcttaa 40673543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 46656341 - 46656413
Alignment:
Q  77 tgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||| |||||||||||||||| ||||||||||| || ||||||| |||||||||  ||||||||||||||    
T  46656341 tgtgagctttaattgattagtgatcaaattaagtaataaagctattagatttctaattggataattaattaaa 46656413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 585 - 676
Target Start/End: Complemental strand, 48128156 - 48128064
Alignment:
Q  585 aataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgtttcatg 676  Q
    ||||||||||| |||||||| | |||||||||||||| |||||||||||||||| || |  | || ||||||||||||| |||||||||||||    
T  48128156 aataaatcaaacatgtcgtagaaccgatcataatcatgttcaatgttttgtttgtttccgctattgattcataattgttgaacatgtttcatg 48128064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 670
Target Start/End: Complemental strand, 11846214 - 11846086
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||||||||||||||  | | |||||||||||||        | |||||||| |||||||||||||||| ||||||||||||    
T  11846214 ctttatccaggtattcctaataccctaattcttaatatacttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttg 11846123  T
Q  634 tttgctttcattgttaattcataattgttaaacatgt 670  Q
    ||||||| |  | || ||| ||||||||| |||||||    
T  11846122 tttgcttccgctattgatttataattgttgaacatgt 11846086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 39551961 - 39551848
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||  ||||||||| |||||||||||| |||| || ||||| ||||||| |||| || |||| | |||||||||||| || ||||||| | |||    
T  39551961 tttaagcataccaaatttagcaattattcttttaaaaaatcaactat-acaattttcaatacactcaataaacaacttttcataaagaacttactaatta 39551863  T
Q  258 aagtgcttaaagagt 272  Q
    ||||| |||||||||    
T  39551862 aagtgtttaaagagt 39551848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 9586559 - 9586490
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtg 98  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  9586559 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttagttgattagtg 9586490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 250
Target Start/End: Complemental strand, 49362460 - 49362368
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaactta 250  Q
    ||||| |||| |||||||| ||||||||||||| ||||||  ||||||||||||||||||| | | || | |||| |||| ||||||||||||    
T  49362460 tttaaacatcccaaatttaataattattcttttaaaaagttaactattacaatttccaatgtatttaatatacaattttttattaaaaactta 49362368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 26900109 - 26900014
Alignment:
Q  179 aattattcttttcaaaa-gtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtg 273  Q
    |||||||||||| |||| ||| ||||||||||||| ||||||| | |  ||| ||||||||||  |||| ||||||||||||||| ||||||||||    
T  26900109 aattattcttttaaaaaagtcaactattacaattttcaatgcatttattacataacttttcatataaaatttaccatttaaagtgtttaaagagtg 26900014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 28964919 - 28964974
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  28964919 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 28964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 10769304 - 10769189
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  10769304 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 10769205  T
Q  450 atcagccatcgctaac 465  Q
    |||||||  |||||||    
T  10769204 atcagccgccgctaac 10769189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 8474674 - 8474561
Alignment:
Q  37 acaaataccttaataataattatattagttatttatcaagtgtgagcctt-aattgattagtgattaaattaagtaacaaggctattaaatttctaatga 135  Q
    ||||||| | |||||||||||||||||  | || ||||| |||| ||||| |||||||||||||| ||||||||||| || | ||||| |||| ||||      
T  8474674 acaaatatcgtaataataattatattaacttttaatcaattgtgggcctttaattgattagtgatcaaattaagtaataatgttattagatttataattc 8474575  T
Q  136 gataattaattaaa 149  Q
     |||||||||||||    
T  8474574 aataattaattaaa 8474561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 26429752 - 26429646
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  26429752 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 26429653  T
Q  450 atcagcc 456  Q
    |||||||    
T  26429652 atcagcc 26429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 536 - 640
Target Start/End: Complemental strand, 17593432 - 17593335
Alignment:
Q  536 tttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgt 634  Q
    ||||| ||||||||||||||||||||||||||  | | |||||||||| ||        | |||||||| |||||||||||||||| |||||||||||||    
T  17593432 tttatccaggtattcctaataccctaattcttaatattcttgataaattaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgt 17593341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 52638252 - 52638173
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaactta 250  Q
    |||||||||||||||| |||| ||||| | ||||||||||||||||||||| | || |||||| |||| | ||||||||||    
T  52638252 aaatttagtaattattattttaaaaagccaactattacaatttccaatgcagtgaatacacaatttttta-taaaaactta 52638173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 26143167 - 26143214
Alignment:
Q  227 acacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgt 274  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||    
T  26143167 acacaaattttcattaaaaacttaccatttaaaatgtttaaagagtgt 26143214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 53069162 - 53069107
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| ||||| || |||||||||||||||| |||||||||||||||||||    
T  53069162 ataaatcaaacatgtcatagatccgatcataatcatgttcaatgttttgtttgctt 53069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 672
Target Start/End: Complemental strand, 55003520 - 55003433
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||| ||| |||||||| |||||||||||||||| ||||||||||| |||||||    | || ||||||||||||| |||||||||    
T  55003520 ataaattaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgcttctgctattgattcataattgttgaacatgttt 55003433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 13837555 - 13837613
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  13837555 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 13837613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 47638917 - 47639006
Alignment:
Q  180 attattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||| ||||| ||||||  |||||||||||||  |||||| |||| |||||| ||||||| || ||||||| | ||||| |||||||||    
T  47638917 attatgcttttaaaaagttaactattacaatttttaatgcactcaatacacaatttttcataaagaacttactaattaaaatgcttaaag 47639006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 407 - 586
Target Start/End: Original strand, 13444939 - 13445120
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctcc-----gttta 500  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||  | ||||||||||| | || |||| || ||||| |||||     |||||    
T  13444939 aagagaacttgaggcataaaagtatcggttgaggaagaaccaaatcagccgccactaaccctgttttgtggttcagatcatcacatctcctctttgttta 13445038  T
Q  501 tggttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaa 586  Q
    |||||| |      |||||| |||  ||||||   |||||  |||||||||||||||||||||||||  | |||||||||||||||    
T  13445039 tggttgttac----tgagagagctgtcatgaatgttttatctaggtattcctaataccctaattcttaatatccttgataaatcaa 13445120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 41309886 - 41309842
Alignment:
Q  229 acaacttttcattaaaaacttaccatttaaagtgcttaaagagtg 273  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||    
T  41309886 acaatttttcattaaaaacttatcatttaaagtgtttaaagagtg 41309842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 26143090 - 26143153
Alignment:
Q  178 taattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcatt 241  Q
    ||||||||||||| ||||||| |||||||||||||  |||||| | || |||||| ||||||||    
T  26143090 taattattcttttaaaaagtcaactattacaattttgaatgcatttaatacacaatttttcatt 26143153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 45529143 - 45529084
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||||||||| ||| |  ||||||||||||| || | ||||||||||||||||||||||    
T  45529143 taaaaacttactattaagggtgcttaaagagtatcccgggggcactcgttaacatttccc 45529084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 45988310 - 45988253
Alignment:
Q  179 aattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaactttt 237  Q
    |||||||||||| |||| || |||||||||||||| ||||| || ||||||||||||||    
T  45988310 aattattcttttaaaaaatcaactattacaatttctaatgc-attaacacacaactttt 45988253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 2982755 - 2982694
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaa 108  Q
    ||||||||||||||| |  ||||||||||  | |||||||| |||||||||||| |||||||    
T  2982755 taataataattatataatctatttatcaatagcgagccttatttgattagtgatcaaattaa 2982694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 22730575 - 22730530
Alignment:
Q  175 tagtaattattcttttcaaaagtcgactattacaatttccaatgca 220  Q
    |||||||||||||||| ||||||| ||||||| ||||| |||||||    
T  22730575 tagtaattattcttttaaaaagtcaactattataattttcaatgca 22730530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 24643925 - 24643884
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagtga 342  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||    
T  24643925 ttaattaaatatttaattaattgatatggactcaacgagtga 24643884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 19890295 - 19890178
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||||||||||| | || ||||||||||||||||||||||||  ||||     
T  19890295 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaaacttattatttt 19890196  T
Q  258 aagtgcttaaagagtgtc 275  Q
    ||||||||||||| ||||    
T  19890195 aagtgcttaaagaatgtc 19890178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 1334990 - 1334875
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| |||||||| ||||||||||||  |||| || ||||||||||||||||||||| |||| | |||| ||||||||||||||||| ||||||    
T  1334990 tttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttatcattta 1334891  T
Q  258 aagtgcttaaagagtg 273  Q
    ||||||||||||||||    
T  1334890 aagtgcttaaagagtg 1334875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 9449059 - 9448945
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||| |||||||||||||||||||||||| |||| || ||||||| ||||| |||| || |||| |||||||||||||||||||||||||||||||    
T  9449059 tttaagcaactcaaatttagtaattattcttttaaaaa-tcaactattataattttcaatacattcaatacacaacttttcattaaaaacttaccattta 9448961  T
Q  258 aagtgcttaaagagtg 273  Q
    ||||| ||||||||||    
T  9448960 aagtgtttaaagagtg 9448945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 35439917 - 35439797
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||| ||||    
T  35439917 ttatgtgggcaaatatcgtaacaataattatattcgttatttatcaattgtgagccttgattgattagtgatcaaattaagtaataaggctattagattt 35439818  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  35439817 ctaattggataattaattaaa 35439797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 362 - 670
Target Start/End: Original strand, 13455924 - 13456236
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  13455924 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 13456023  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||| ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  13456024 atcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttga----tgagagggctgccttgaaagctttatccaggt 13456119  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatca-tttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  |  |||||        |||||||||| |||||||| |||||||||||||||  ||||||||||||||||||| |  |    
T  13456120 attcctaataccctaattcttaatacccttg--------ataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgct 13456211  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||| ||||||| |||||||    
T  13456212 attgattcacaattgttgaacatgt 13456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 362 - 670
Target Start/End: Original strand, 13461865 - 13462177
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  13461865 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 13461964  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||| ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  13461965 atcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttga----tgagagggctgccttgaaagctttatccaggt 13462060  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatca-tttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  |  |||||        |||||||||| |||||||| |||||||||||||||  ||||||||||||||||||| |  |    
T  13462061 attcctaataccctaattcttaatacccttg--------ataaatcaaacatgtcgtagatccgatcataatcaggttcaatgttttgtttgcttccgct 13462152  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||| ||||||| |||||||    
T  13462153 attgattcacaattgttgaacatgt 13462177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 28683491 - 28683371
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| ||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  28683491 ttatgtgggcaaatatcgtaacaataattatattagttatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 28683392  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||| ||||||||    
T  28683391 ctaattggataaataattaaa 28683371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 31001989 - 31002109
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| ||||    
T  31001989 ttatgtgggcaaatatcataacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagattt 31002088  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  31002089 ctaattggataattaattaaa 31002109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 158 - 298
Target Start/End: Complemental strand, 31452452 - 31452313
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||| |||| ||| |||||||||||||||||| ||||||| || |||||||||| ||||||| |||| ||||||||||| ||||||||||||| |||||    
T  31452452 tttaaacatcccaagtttagtaattattcttttaaaaagtcaacaattacaattttcaatgcattcaatacacaactttt-attaaaaacttactattta 31452354  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    ||||||||||| | |||  | ||  ||||||||||||||||    
T  31452353 aagtgcttaaataatgttccgggaacactcgttaacatttc 31452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 35085014 - 35084697
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  35085014 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 35084915  T
Q  450 atcagccatcgctaaccctgttc--------tttgtttcatatatcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttata 541  Q
    |||||||  |||||||||| ||         ||||||||| ||  |||||||| |||||| |||||||     |||||||||| |||||||  ||||||     
T  35084914 atcagccgccgctaaccctatttatttattgtttgtttcagat--cacctctctgtttattgttgatgc----tgagagggctgccatgaaagctttatc 35084821  T
Q  542 caggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatca-tttcaatgttttgtttgctt 640  Q
    |||||||||||||||| |||||| ||  | | |||||||||||||        | |||||||| ||||||||||||||| ||||||||||||||||||||    
T  35084820 caggtattcctaatacactaattgttaatattcttgataaatcaa--------acatgtcgtagatccgatcataatcattttcaatgttttgtttgctt 35084729  T
Q  641 tcattgttaattcataattgttaaacatgttt 672  Q
     |  | || ||||||||||||| |||||||||    
T  35084728 ccgctattgattcataattgttgaacatgttt 35084697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 35090987 - 35090670
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  35090987 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 35090888  T
Q  450 atcagccatcgctaaccctgttc--------tttgtttcatatatcacctctccgtttatggttgatgaatgttgagagggcttccatgaacactttata 541  Q
    |||||||  |||||||||| ||         ||||||||| ||  |||||||| |||||| |||||||     |||||||||| |||||||  ||||||     
T  35090887 atcagccgccgctaaccctatttatttattgtttgtttcagat--cacctctctgtttattgttgatgc----tgagagggctgccatgaaagctttatc 35090794  T
Q  542 caggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||||||||| |||||| ||  | | |||||||||||||        | |||||||| |||||||||||||||| |||||||||||||||||||    
T  35090793 caggtattcctaatacactaattgttaatattcttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 35090702  T
Q  641 tcattgttaattcataattgttaaacatgttt 672  Q
     |  | || ||||||||||||| |||||||||    
T  35090701 ccgctattgattcataattgttgaacatgttt 35090670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 31007989 - 31008087
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  31007989 aataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 31008087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 35442357 - 35442259
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||| | |||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  35442357 aataattatattcgctatttatcaattgtgagccttgattgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 35442259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 44717330 - 44717232
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  44717330 aataattatattagctatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 44717232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 156 - 301
Target Start/End: Original strand, 4762347 - 4762492
Alignment:
Q  156 tgtttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatt 255  Q
    |||||||||||| ||||||||||||||||| ||||  |||||| ||||||| ||||| ||||||| |||| |||||| |||| |||||||| |||| |||    
T  4762347 tgtttaagcatcccaaatttagtaattattattttataaagtcaactattataattttcaatgcattcaatacacaattttttattaaaaatttactatt 4762446  T
Q  256 taaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    ||||||| ||||| |||| | || |  || ||||||||||||||||    
T  4762447 taaagtgattaaaaagtgcctcaagaacattcgttaacatttccct 4762492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 30964940 - 30965060
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| ||| |||||| ||||    
T  30964940 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataagactattagattt 30965039  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  30965040 ctaattggataattaattaaa 30965060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 13455712 - 13455803
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  13455712 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 13455803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 13461653 - 13461744
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  13461653 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 13461744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 15505544 - 15505683
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| || ||||||||| ||||||||||||  ||||||  ||||||| ||||| |||| || |||| |||||||||||||||  |||||||| |||||    
T  15505544 tttaagtatttcaaatttaataattattctttcaaaaagtaaactattataattttcaatacattcaatacacaacttttcattccaaacttactattta 15505643  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    ||||| || ||||||| ||||| | |||||||||||||||    
T  15505644 aagtgtttcaagagtgccacagagacactcgttaacattt 15505683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 35085226 - 35085135
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  35085226 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 35085135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 36750027 - 36750118
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  36750027 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 36750118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 19879225 - 19879327
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    ||||||||| |||||||| ||||||| || ||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||| |||||    
T  19879225 taataataactatattagctatttattaattgtgagccttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataaataatt 19879324  T
Q  147 aaa 149  Q
    |||    
T  19879325 aaa 19879327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 35091181 - 35091108
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  35091181 taataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 35091108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 156 - 273
Target Start/End: Original strand, 41933129 - 41933246
Alignment:
Q  156 tgtttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatt 255  Q
    ||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||||||| ||||||| |||  | ||||||||| || ||||| |||| | |    
T  41933129 tgtttaaacatatcaaatttagcaattattcttttaaaaagtcaactattacaattttcaatgcactcagtaaacaactttttataaaaaatttactaat 41933228  T
Q  256 taaagtgcttaaagagtg 273  Q
    ||||||||||||||||||    
T  41933229 taaagtgcttaaagagtg 41933246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 13150236 - 13150116
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||| || ||| ||||||| |||| ||||||||||| |||||||||| ||||    
T  13150236 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgggcattagttgattattgatcaaattaagtaataaggctattagattt 13150137  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  13150136 ctaattggataattaattaaa 13150116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 31017403 - 31017275
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||||||||||||||||  ||||||| | ||||  ||||| ||||||| | || |||||||||||||||||||||||  |||||||||||||||||    
T  31017403 caaatttagtaattattctttaaaaaagtcaaatattttaattttcaatgcatttaatacacaacttttcattaaaaacttttcatttaaagtgcttaaa 31017304  T
Q  269 gagtgtcacaggggcactcgttaacattt 297  Q
    || || | |   |||||||||||||||||    
T  31017303 gaatgccccgaaggcactcgttaacattt 31017275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 672
Target Start/End: Original strand, 36750296 - 36750553
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| ||||||||||||  ||||||||||| ||||| ||||||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  36750296 aagagaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcg 36750395  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| ||| |    |||||||| | |||||   ||||| ||||||||||||||||||||||||||  | |||||||||||||||        | |||||||    
T  36750396 ttgttgatt----agagggctgctatgaaagttttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgt 36750483  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  36750484 agatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 36750553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 34904894 - 34904779
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| |||||| ||||||||||||||||||| |||| || |||||||||||||  |||| | | || ||| || |||||||||| ||||||| |||||    
T  34904894 tttaagtatctcatatttagtaattattcttttaaaaaatcaactattacaatttttaatgaatttaatacaaaatttttcattaataacttacaattta 34904795  T
Q  258 aagtgcttaaagagtg 273  Q
    ||||||||||||||||    
T  34904794 aagtgcttaaagagtg 34904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 23283856 - 23283946
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct 119  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||| |  ||| ||||||||||||||||| ||||||||||| ||||||    
T  23283856 ttatgtggacaaatatcgtaataataattatattagttatttatcaatttggagtcttaattgattagtgatcaaattaagtaataaggct 23283946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 23343176 - 23343297
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggc-tattaaatt 127  Q
    |||||| |||||||| | |||||||||||||||||  |||||||||| |  ||||||||||||||||||||| ||||||||||| ||||| ||||| |||    
T  23343176 ttatgtggacaaatatcataataataattatattaactatttatcaatttggagccttaattgattagtgatcaaattaagtaataaggcttattagatt 23343275  T
Q  128 tctaatgaga-taattaattaa 148  Q
    |||| | ||| |||||||||||    
T  23343276 tctatttagagtaattaattaa 23343297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 170 - 273
Target Start/End: Original strand, 19514883 - 19514986
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||  |||||||||||| ||||||| ||||||| ||||  ||||||||| || | ||||||||||||  ||||||||| |||||||||||||||||    
T  19514883 aaatttaacaattattctttttaaaagtcaactattataattatcaatgcaatgaatatacaacttttcatataaaacttacaatttaaagtgcttaaag 19514982  T
Q  270 agtg 273  Q
    ||||    
T  19514983 agtg 19514986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 7771711 - 7771613
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| ||| || |||| ||||||| |||| ||||||||||| || ||||||| |||||||||  ||||||||||||||    
T  7771711 aataattatattagctatttatcaattgtaagtcttagttgattactgatcaaattaagtaataaagctattagatttctaattggataattaattaaa 7771613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 535 - 672
Target Start/End: Complemental strand, 28683096 - 28682966
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||    
T  28683096 ctttatccaggtattcctaataccctaattcttaataaccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttg 28683005  T
Q  634 tttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||| |  | || ||||||||||||| |||||||||    
T  28683004 tttgcttccgctattgattcataattgttgaacatgttt 28682966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 29239336 - 29239238
Alignment:
Q  176 agtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtc 275  Q
    |||||||||| |||| ||||||| ||||||||||||| ||||||| |||| |||| | ||||||||||| | |||| | |||||||||||||||||||||    
T  29239336 agtaattatt-ttttaaaaagtcaactattacaattttcaatgcattcaatacaccatttttcattaaagatttactaattaaagtgcttaaagagtgtc 29239238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 38533974 - 38533864
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||||||||||||||||||||| |||| || |||| ||||||  |||||| |||||| |||| |||||| ||||| ||| |||||||| ||||     
T  38533974 tttaagcatctcaaatttagtaattatt-ttttaaatagtcaactattgtaatttctaatgcattcaatacacaatttttctttacaaacttactatttc 38533876  T
Q  258 aagtgcttaaag 269  Q
    || |||||||||    
T  38533875 aaatgcttaaag 38533864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 20064923 - 20065020
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| ||||| | | || |||||| |||||| ||||| ||| | ||||||||||||||||    
T  20064923 aaatatagtaattattcttttaaaaagtcaactattacaattttcaatgtattaaatacacaatttttca-taaaacctttctatttaaagtgcttaaa 20065020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 9173801 - 9173696
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatc-aacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||| ||||||| |||| |||| || ||||||||||||| |||| ||||| || |||||| ||||||| |||||||| | | |||||||| |||||    
T  9173801 aaatttagcaattatttttttaaaaaatcaactattacaattttcaatacaatcaaatacacaatttttcataaaaaacttgctaattaaagtgtttaaa 9173702  T
Q  269 gagtgt 274  Q
    ||||||    
T  9173701 gagtgt 9173696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 31651356 - 31651416
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| ||||||    
T  31651356 ttaattaaatatttaattaattgatatggactcaatgagtcgatgtctagatgatccatta 31651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 362 - 632
Target Start/End: Complemental strand, 44717140 - 44716866
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  44717140 agaggctatggtccccaatacaccgtacacggcaatactatctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 44717041  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    |||||| ||| | |  ||  |||||| |||||    
T  44717040 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagagctgctacaaaagctttatccaggt 44716945  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgtttt 632  Q
    |||||||||||||||||||||  | ||||||         ||||||||| |||||||| |||||||||||||||| |||||||||||    
T  44716944 attcctaataccctaattcttaatatccttg--------gtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 44716866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 640
Target Start/End: Complemental strand, 13149794 - 13149739
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  13149794 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 13149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 14295628 - 14295707
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaactttt 237  Q
    |||||| ||| |||||||||||||||||||||| ||| ||  ||||||||||||| ||||||| | || |||||||||||    
T  14295628 tttaagaatcccaaatttagtaattattcttttaaaaggttaactattacaattttcaatgcattgaatacacaactttt 14295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 672
Target Start/End: Complemental strand, 35438816 - 35438730
Alignment:
Q  587 taaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||| |  | || |||||||| |||| |||||||||    
T  35438816 taaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttatttgcttccgctattgattcataactgttgaacatgttt 35438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 535 - 640
Target Start/End: Original strand, 31002385 - 31002483
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||||||||||||||  | | |||||||||||||        | |||||||| |||||||||||||||| |||||| |||||    
T  31002385 ctttattcaggtattcctaataccctaattcttgatattcttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatattttg 31002476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 535 - 640
Target Start/End: Original strand, 31008363 - 31008461
Alignment:
Q  535 ctttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttg 633  Q
    |||||| ||||||||||||||||||||||||||  | | |||||||||||||        | |||||||| |||||||||||||||| |||||| |||||    
T  31008363 ctttattcaggtattcctaataccctaattcttgatattcttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatattttg 31008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 19879320 - 19879379
Alignment:
Q  302 taattaaatatttaattaattggtatggacccaatgagtg-atgtctagatgacccatta 360  Q
    |||||||||||||||||||||| ||| ||| ||||||||| ||||| |||||||||||||    
T  19879320 taattaaatatttaattaattgatattgactcaatgagtgaatgtccagatgacccatta 19879379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 30965379 - 30965434
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||    
T  30965379 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatattttgtttgctt 30965434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 407 - 466
Target Start/End: Complemental strand, 35438983 - 35438924
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaacc 466  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  ||||||||    
T  35438983 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaacc 35438924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 38533451 - 38533341
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||||||||||| ||||| || |||| || |||| ||||||  |||||| |||||| |||| |||||| ||||| ||| ||| |||| ||||     
T  38533451 tttaagcatctcaaatttaataatt-ttattttaaatagtcaactattgtaatttctaatgcattcaatacacaatttttctttacaaaattactatttc 38533353  T
Q  258 aagtgcttaaag 269  Q
    || |||||||||    
T  38533352 aaatgcttaaag 38533341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 13149962 - 13149904
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  13149962 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 13149904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 37993090 - 37993220
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    ||||||| ||| ||||||||  |||| || ||||||||||||| ||||||| | || ||| || |||| |||||||| |||| ||||||| || ||||||    
T  37993090 aaatttaataactattctttcaaaaaatcaactattacaattttcaatgcatttaatacataattttttattaaaaatttactatttaaaatgtttaaag 37993189  T
Q  270 agtgtcacaggggcactcgttaacatttccc 300  Q
    | ||   ||| | ||||| ||||||||||||    
T  37993190 aatgcttcagagacactctttaacatttccc 37993220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 5524461 - 5524570
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||| ||||||||||| |||| ||||||  | |||||||| ||  |||||| ||||  |||||||||| ||| || | |||| |||||    
T  5524461 tttaagcatcctaaatatagtaattatttttttgaaaagttaattattacaacttttaatgcattcaatgcacaactttttatttaagatttactattta 5524560  T
Q  258 aagtgcttaa 267  Q
    ||||||||||    
T  5524561 aagtgcttaa 5524570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 303
Target Start/End: Original strand, 21004794 - 21004855
Alignment:
Q  242 aaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    ||||| ||||||||||||   ||||||||||| | |||||| ||||||||||||||||||||    
T  21004794 aaaaaattaccatttaaaagtcttaaagagtgccccaggggaactcgttaacatttccctta 21004855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 456
Target Start/End: Complemental strand, 28683223 - 28683174
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagcc 456  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||    
T  28683223 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagcc 28683174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 29034702 - 29034759
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaa 464  Q
    ||||||| ||||| |||||| ||||| |||||| ||||||||||||||||| ||||||    
T  29034702 aagagaacttgagacataaaggtaccagttgaggaagaatcaaatcagccaccgctaa 29034759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 3655788 - 3655708
Alignment:
Q  222 tcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    |||| |||||||||||||| || ||||||| | ||||||||   | |||||| | | ||||||||||||||||||||||||    
T  3655788 tcaatacacaacttttcataaagaacttactaattaaagtgtgaagagagtgccccgggggcactcgttaacatttccctt 3655708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 11048989 - 11048929
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||| ||| ||||||| ||||| || ||||||| ||||||||||||    
T  11048989 ttaattaaatatttaattagttgatatggactcaatgggtggatgtctggatgacccatta 11048929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 31002101 - 31002161
Alignment:
Q  301 ttaattaaatatttaattaattggtatggacccaatgagt-gatgtctagatgacccatta 360  Q
    ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||    
T  31002101 ttaattaaatatttaattagttgatatggactcaatgagtggatgtccggatgacccatta 31002161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 35443516 - 35443460
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    ||||||||||| ||| ||||| ||||||||||||  ||| |||||||||||||||||    
T  35443516 taaaaacttacgattaaaagtacttaaagagtgttccagaggcactcgttaacattt 35443460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 3882720 - 3882759
Alignment:
Q  263 cttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  3882720 cttaaagagtgtcccgggggcactcgttaacatttccctt 3882759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 672
Target Start/End: Original strand, 23343612 - 23343699
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||| |||||||| || || ||||| |||| ||||||||||||||||||| |  |||| |||| |||| ||| |||||||||    
T  23343612 ataaatcaaacatgtcgtagattcgttcatattcatgttcaatgttttgtttgcttccgctgttgattcgtaatcgttgaacatgttt 23343699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 567
Target Start/End: Original strand, 30965337 - 30965368
Alignment:
Q  536 tttatacaggtattcctaataccctaattctt 567  Q
    ||||||||||||||||||||||||||||||||    
T  30965337 tttatacaggtattcctaataccctaattctt 30965368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 28453357 - 28453425
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaattaaata 311  Q
    ||||||||||| ||| |||||||||||| |||||| ||||  |||||||||||||||| |||| |||||||    
T  28453357 taaaaacttactattaaaagtgcttaaa-agtgtcccagga-cactcgttaacatttcacttatttaaata 28453425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 11944964 - 11944888
Alignment:
Q  173 tttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaactta 250  Q
    ||||||||||||| ||   ||| ||| ||||||||||||| ||||||| | || ||||||||||||| ||||||||||    
T  11944964 tttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaatacacaacttttca-taaaaactta 11944888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 19879480 - 19879529
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagcc 456  Q
    ||||||| |||||||||||| |||||| ||||  ||||||||||||||||    
T  19879480 aagagaacttgaggcataaaggtaccgattgaagaagaatcaaatcagcc 19879529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 23343435 - 23343484
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagcc 456  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||    
T  23343435 aagagaacttgaggcataaaggtatcggttgaggaagaaccaaatcagcc 23343484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 24792072 - 24792133
Alignment:
Q  241 taaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccctt 302  Q
    ||||||||||| ||| |  || ||||||||||| |  |||||||||||||||||||||||||    
T  24792072 taaaaacttactattaatggttcttaaagagtgccctaggggcactcgttaacatttccctt 24792133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 29832877 - 29832938
Alignment:
Q  88 attgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||||||||| ||||||||||| ||| |||||| | || ||||  ||||||||||||||    
T  29832877 attgattagtgataaaattaagtaataagactattagacttttaattggataattaattaaa 29832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 561
Target Start/End: Complemental strand, 35438870 - 35438825
Alignment:
Q  516 gagagggcttccatgaacactttatacaggtattcctaatacccta 561  Q
    |||| |||| |||||||  |||||||||||||||||||||||||||    
T  35438870 gagacggctgccatgaaagctttatacaggtattcctaatacccta 35438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 158 - 298
Target Start/End: Complemental strand, 62631 - 62491
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||||| |||| ||||||| |||| ||| || |||| ||||||||||||| |||||    
T  62631 tttaagcatctcatatttagtaattattcttttaaaaagtcaactattacgattttcaatgcattcaatacataattttttattaaaaacttactattta 62532  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttc 298  Q
    |||||||||||||||  | | | | ||||||||||||||||    
T  62531 aagtgcttaaagagtaccccggagacactcgttaacatttc 62491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 6e-33; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 362 - 672
Target Start/End: Complemental strand, 8651138 - 8650824
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    |||||||||||||||||||| || ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  8651138 agaggctatggtccccaatataccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 8651039  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  8651038 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgccttgaaagctttatccaggt 8650943  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  8650942 attcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 8650851  T
Q  646 gttaattcataattgttaaacatgttt 672  Q
     || ||||||||||||| |||||||||    
T  8650850 attgattcataattgttgaacatgttt 8650824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 17215789 - 17215674
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | |||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||| | |||| |||| |||||||||||||||||||    
T  17215789 tttaagcatttaaaatttagtaattatttttttaaaaagtcaactattacaattttcaatgcattcaataaacaattttttattaaaaacttaccattta 17215690  T
Q  258 aagtgcttaaagagtg 273  Q
    ||||||||||||||||    
T  17215689 aagtgcttaaagagtg 17215674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 32823697 - 32823821
Alignment:
Q  178 taattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcac 277  Q
    ||||||||||||| ||||||| | ||||||||||| ||||||| |||| |||||||||||||||||||||||   |||||||||||||||||||||   |    
T  32823697 taattattcttttgaaaagtcaattattacaattttcaatgcattcaatacacaacttttcattaaaaacttgttatttaaagtgcttaaagagtgctcc 32823796  T
Q  278 aggggcactcgttaacatttccctt 302  Q
     | ||||||||||||||||||||||    
T  32823797 ggaggcactcgttaacatttccctt 32823821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 7421683 - 7421811
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||||||||||||  ||| ||||||| | ||||||||||| ||||||| | || ||||||||||| | |||||  |||| ||||||||||||||||    
T  7421683 caaatttagtaattatttatttaaaaagtcaaatattacaattttcaatgcatttaatacacaactttttaataaaactttactatttaaagtgcttaaa 7421782  T
Q  269 gagtgtcacaggggcactcgttaacattt 297  Q
    ||||||||||||  |||||||||||||||    
T  7421783 gagtgtcacaggaacactcgttaacattt 7421811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 21771111 - 21770991
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| |||||||| | ||| |||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||  |||||| ||||    
T  21771111 ttatgtggacaaatatcgtaacaataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaaactattagattt 21771012  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||   |||||||||||||    
T  21771011 ctaattgaataattaattaaa 21770991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 30906127 - 30906007
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |  |||| |||||| |||||||||| ||||    
T  30906127 ttatgtgggcaaatatcgtaataataattatattagttatttatcaattgtgagccttagttgattagtaaccaaataaagtaataaggctattagattt 30906028  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  30906027 ctaattggataattaattaaa 30906007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 1840983 - 1841084
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||| | ||||||| ||||||||||||| |||| || ||||||||||||||||||||| |||| ||||||||||| |||||||||||| ||||||    
T  1840983 tttaagcatattaaatttaataattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttaattaaaaacttatcattta 1841082  T
Q  258 aa 259  Q
    ||    
T  1841083 aa 1841084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 8651350 - 8651230
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||| |||||||||||||| |||||||||| |||||| |||| |||||||||||| ||||||||||| ||| |||||| ||||    
T  8651350 ttatgtgggcaaatatcgtaacaataattatattagctatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataagactattagattt 8651251  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  8651250 ctaattggataattaattaaa 8651230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 4580868 - 4580777
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  4580868 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 4580777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 25343240 - 25343331
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  25343240 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgaaccttaattgattagtgattaaattaagtaataaggcta 25343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 25353826 - 25353917
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  25353826 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 25353917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 31855078 - 31855168
Alignment:
Q  182 tattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagt 272  Q
    |||| |||| ||||||| ||||||||||||||||||||| |||| | |||| |||||||||||||||||| ||||||||||||||||||||    
T  31855078 tattattttaaaaagtcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttactatttaaagtgcttaaagagt 31855168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 21191417 - 21191296
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct-attaaatt 127  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||| | |||| |||| |||    
T  21191417 ttatgtgggcaaatatcgtaataataattatattagttatttatcaatttagagccttaattgattagtgatcaaattaagtaatatggctaattagatt 21191318  T
Q  128 tctaatgagataattaattaaa 149  Q
    ||||||  ||||| ||||||||    
T  21191317 tctaattggataaataattaaa 21191296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 17581217 - 17581337
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | |||||||||||||||||  |||||||||| ||||||||| |||||||||||||| ||||||||||| ||| ||||||   ||    
T  17581217 ttatgtgggcaaatatcgtaataataattatattaactatttatcaattgtgagcctcaattgattagtgatcaaattaagtaataagactattatggtt 17581316  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  17581317 ctaattggataattaattaaa 17581337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 6096945 - 6097044
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaa-tgagataattaattaaa 149  Q
    ||||||||||||| |||||| |||| ||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |  ||||||||||||||    
T  6096945 aataattatattacttatttgtcaattgtcagccttacttgattagtgatgaaattaagtaataaggctattaaatttctaattttgataattaattaaa 6097044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 416 - 668
Target Start/End: Complemental strand, 21191135 - 21190891
Alignment:
Q  416 tgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaat 512  Q
    ||||||||||| |||||||||||| ||||| ||||||||||  ||||||| || || | |||||||||| ||| ||||||  |  |||| |||| |||      
T  21191135 tgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcatatcatctcctctctttggttatcgttgttga-- 21191038  T
Q  513 gttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgat 612  Q
      |||||||||| || ||||  |||||| |||||||| |||||||||||||||||  | || ||||||||||||        |||| ||||| |||||||    
T  21191037 --tgagagggctgccttgaaagctttatccaggtatttctaataccctaattcttaatatctttgataaatcaa--------atatatcgtagatccgat 21190948  T
Q  613 cataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacat 668  Q
    ||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||    
T  21190947 cataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacat 21190891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 21197570 - 21197467
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct-attaaatttctaatgagataattaat 145  Q
    ||||||||||||||||||||||||||||| |  ||||||||| ||||||||||| ||||||||||| |||||| |||| |||||||||  ||||| ||||    
T  21197570 taataataattatattagttatttatcaatttagagccttaactgattagtgatcaaattaagtaataaggctaattagatttctaattggataaataat 21197471  T
Q  146 taaa 149  Q
    ||||    
T  21197470 taaa 21197467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 28874399 - 28874538
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||| ||||||||||||||||| |||| || ||||||| ||||||||||||| |||| ||| || ||||||||||||||||   |||||    
T  28874399 tttaagcatcataaaattagtaattattcttttgaaaaatcaactattataatttccaatgcattcaatacaaaatttttcattaaaaacttgttattta 28874498  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    || || ||||||| | || | | |||||||||||||||||    
T  28874499 aaatgtttaaagaatatcccggaggcactcgttaacattt 28874538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 21783854 - 21783752
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||||||||||||||  |||||||||| |||||| |||| | |||||||||| ||||||||||| ||  ||||||||||||||||  |||||||||||    
T  21783854 taataataattatattaactatttatcaattgtgagtcttagtggattagtgatcaaattaagtaataaaactattaaatttctaattggataattaatt 21783755  T
Q  147 aaa 149  Q
    |||    
T  21783754 aaa 21783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 30801785 - 30801886
Alignment:
Q  202 tattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatttccct 301  Q
    ||||| ||||| ||||||| |||| ||||||||||| ||||||||||| | |||||||||||||||||| |||| | |||| |||||||||||||| |||    
T  30801785 tattataattttcaatgcattcaatacacaacttttaattaaaaacttgctatttaaagtgcttaaagaatgtcccgggggtactcgttaacattttcct 30801884  T
Q  302 ta 303  Q
    ||    
T  30801885 ta 30801886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 2864878 - 2865016
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaa-acttaccattt 256  Q
    |||||| || |||||||||| ||||||| ||||||||| |  ||||||||||||| ||||||| | || |||||| ||||||| |||| |||||||||||    
T  2864878 tttaaggatttcaaatttagcaattatt-ttttcaaaaata-actattacaatttacaatgcattaaatacacaatttttcatcaaaaaacttaccattt 2864975  T
Q  257 aaagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    ||| || |||||||||||| | |||||||| ||||||||||    
T  2864976 aaaatgtttaaagagtgtctcgggggcactagttaacattt 2865016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 5446752 - 5446625
Alignment:
Q  174 ttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtg 273  Q
    ||||||||||||||||| || |||| ||| ||||||||| ||||||| ||||  ||| |||||| |||||||| || | ||||||||||| |  ||||||    
T  5446752 ttagtaattattcttttgaatagtcaactgttacaattttcaatgcattcaatgcaccacttttaattaaaaaattgctatttaaagtgc-tcgagagtg 5446654  T
Q  274 tcacaggggcactcgttaacatttccctta 303  Q
    || | |||||||||||||||||||||||||    
T  5446653 tc-cgggggcactcgttaacatttccctta 5446625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 170 - 299
Target Start/End: Original strand, 30739611 - 30739740
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaag 269  Q
    |||||||||||||||||| || ||||||  |||  ||| |||||||||||| |||| |||||| ||||||||||||| ||| ||||| || ||||||||     
T  30739611 aaatttagtaattattctattaaaaagttaactggtacgatttccaatgcattcaatacacaatttttcattaaaaatttatcattttaaatgcttaaaa 30739710  T
Q  270 agtgtcacaggggcactcgttaacatttcc 299  Q
    ||||   || || |||||||||||||||||    
T  30739711 agtggtccatggacactcgttaacatttcc 30739740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 515 - 672
Target Start/End: Complemental strand, 32035457 - 32035307
Alignment:
Q  515 tgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatca 614  Q
    |||||||||| || ||||   ||||| ||||||||||||||||||||||||||  |  ||||||||||||||        | |||||||| |||||||||    
T  32035457 tgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaataaccttgataaatcaa--------acatgtcgtagatccgatca 32035366  T
Q  615 taatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  32035365 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 32035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 586 - 672
Target Start/End: Complemental strand, 8662889 - 8662802
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  8662889 ataaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 8662802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 515 - 670
Target Start/End: Complemental strand, 21782924 - 21782776
Alignment:
Q  515 tgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatca 614  Q
    |||||||||| || ||||  |||||| ||| ||||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||    
T  21782924 tgagagggctgccttgaaagctttatccagctattcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatca 21782833  T
Q  615 taatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgt 670  Q
    ||||||| ||||||||||||||||||| |  | || ||| ||||||||| |||||||    
T  21782832 taatcatgttcaatgttttgtttgcttccgctattgatttataattgttgaacatgt 21782776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 31756728 - 31756645
Alignment:
Q  66 tatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||| |||| | |||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  31756728 tatttatcaattgtgggtcttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 31756645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 2692524 - 2692427
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||| | | || ||||||||||| ||| |||| |||| |||||||||| |||||    
T  2692524 aaatttagtaattattattttaaaaagtcaactattacaatttccaatgaagtgaatacacaactttttatt-aaaatttactatttaaagtgtttaaa 2692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 670
Target Start/End: Complemental strand, 4580656 - 4580344
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  4580656 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 4580557  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || ||   ||||||| || ||| ||||||  |  |||| |||| |||    |||||||| |   |  ||  |||||| |||||    
T  4580556 atcagccgccgctaactctattgcgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggttgttacaaaagctttatccaggt 4580461  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcatt 645  Q
    |||||||||||||||||||||  | |||||| ||||||||        | |||||||| |||||||||||||||| ||||||||||||||||||| |  |    
T  4580460 attcctaataccctaattcttaatatccttggtaaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgcttccgct 4580369  T
Q  646 gttaattcataattgttaaacatgt 670  Q
     || ||||||| ||||| |||||||    
T  4580368 attgattcatagttgttgaacatgt 4580344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 19293559 - 19293446
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  |||||||  ||||||| |||| ||||||  ||||||||||||||| ||||| |||| |  ||||||||||| |||||| ||| | |||    
T  19293559 tttaagcatcctaaatttaacaattattattttaaaaagttaactattacaatttccgatgcactcaataaccaacttttcataaaaaacctactaatta 19293460  T
Q  258 aagtgcttaaagag 271  Q
    ||||||||||||||    
T  19293459 aagtgcttaaagag 19293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 21770900 - 21770796
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct----------aagagaagttgaggcataaatgtaccggttgagtaagaatcaaat 451  Q
    |||||||| |||||||||||||| |||||||||||||||||||||          ||||||| |||||||||||| |||||||||||| ||||| |||||    
T  21770900 agaggctacggtccccaatacaccgtacacggcaaaactctctcttctccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaaat 21770801  T
Q  452 cagcc 456  Q
    |||||    
T  21770800 cagcc 21770796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 273
Target Start/End: Complemental strand, 1479187 - 1479084
Alignment:
Q  169 caaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    ||||||||||||| |||||||| ||||| | | ||| ||||||| ||||||| | || |||||| ||| ||| ||||| |||||||||||||||||||||    
T  1479187 caaatttagtaatcattcttttaaaaaggcaattatgacaattttcaatgcattgaatacacaattttacat-aaaaatttaccatttaaagtgcttaaa 1479089  T
Q  269 gagtg 273  Q
    |||||    
T  1479088 gagtg 1479084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 2884129 - 2884235
Alignment:
Q  200 actattacaatttccaatgcaatcaacacacaacttttcattaaaa---acttaccatttaaagtgcttaaagagtgtcacaggggcactcgttaacatt 296  Q
    ||||||||||||| ||||||| | || |||||| ||||||| ||||   |||||||||||||| || ||||||||||||   |||||||| |||||||||    
T  2884129 actattacaatttacaatgcattaaatacacaatttttcataaaaaaaaacttaccatttaaaatgtttaaagagtgtcttgggggcactagttaacatt 2884228  T
Q  297 tccctta 303  Q
    |||||||    
T  2884229 tccctta 2884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 9762803 - 9762918
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcatt-aaaaacttaccattt 256  Q
    ||||| ||||| |||||||||| || ||||||| ||||||| | ||||| |||||| ||| || |||  ||||||||||||||| ||||| |||||||||    
T  9762803 tttaaacatcttaaatttagtattt-ttcttttaaaaagtcaattattataatttctaatacattcagtacacaacttttcatttaaaaatttaccattt 9762901  T
Q  257 aaagtgcttaaagagtg 273  Q
    |||||| ||||||||||    
T  9762902 aaagtgattaaagagtg 9762918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 362 - 640
Target Start/End: Original strand, 25354036 - 25354317
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  25354036 agaggctatggtccccaatacaccgtacacgacaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 25354135  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||  |  |||| |||| |||    |||||||||| | |  ||  |||||| |||||    
T  25354136 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgctacaaaagctttatccaggt 25354231  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||||||||||||||  | || ||||||||||||        | |||||||| |||||||||||||||| ||||||| |||||||||||    
T  25354232 attcctaataccctaattcttaatatc-ttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgctttgtttgctt 25354317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 672
Target Start/End: Complemental strand, 31756389 - 31756236
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccga 611  Q
    |||||||||||||  ||||||  || ||| ||| ||||| ||||||||||||||||  | |||||||||| ||||        | |||||||| ||||||    
T  31756389 tgttgagagggctgtcatgaaagctctatccagatattcataataccctaattcttaatatccttgataattcaa--------acatgtcgtagatccga 31756298  T
Q  612 tcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | |||||||| ||||||||||| ||||||| | ||||| ||||||||||||| |||||||||    
T  31756297 ttataatcatgttcaatgttttatttgcttccgttgttgattcataattgttgaacatgttt 31756236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 3766277 - 3766383
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||| ||||||| | |||||||||||| ||||||| | |||||||||||  ||| || |||  ||| ||||||||||  |||||||| ||||||    
T  3766277 tttaagcatcccaaatttggaaattattcttttaaaaagtcaattattacaatttataatacattcattacataacttttcatataaaacttatcattta 3766376  T
Q  258 aagtgct 264  Q
    |||||||    
T  3766377 aagtgct 3766383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 13007328 - 13007441
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggct-attaaatt 127  Q
    |||||| |||||| | ||| ||||||||||||||||||||||||||| |  ||||| |||||||||| |||| |||||||  || ||| || ||||||||    
T  13007328 ttatgtagacaaaaaactttataataattatattagttatttatcaatttggagccctaattgattaatgatcaaattaaacaataagactaattaaatt 13007427  T
Q  128 tctaatgagataat 141  Q
    |||| | |||||||    
T  13007428 tctagttagataat 13007441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 273
Target Start/End: Original strand, 27778766 - 27778868
Alignment:
Q  170 aaatttagtaattattcttttcaaaa-gtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaa 268  Q
    |||||||||||||||| |||| |||| ||| || |||| ||||| ||||||| |||| |||||  ||||||| ||||| |||||||||||||||||||||    
T  27778766 aaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaatacacat-ttttcat-aaaaatttaccatttaaagtgcttaaa 27778863  T
Q  269 gagtg 273  Q
    |||||    
T  27778864 gagtg 27778868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 640
Target Start/End: Original strand, 25343675 - 25343730
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  25343675 ataaatcaaaaatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 25343730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 305
Target Start/End: Complemental strand, 34232061 - 34231916
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||| ||||| ||||||| ||||||||||||  ||||    ||| || |||||| ||||| | | || ||||||||||||||||| ||||| | |||||    
T  34232061 tttaaccatcttaaatttaataattattctttaaaaaaaataactgttgcaattttcaatgtatttaatacacaacttttcattaagaactttc-attta 34231963  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttcccttaat 305  Q
    ||| |||||||||||| | | | ||| |||||||||||||||||||||    
T  34231962 aagggcttaaagagtgcccc-gtggctctcgttaacatttcccttaat 34231916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 1371270 - 1371130
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||| || ||||||||| ||||||||||||| ||||||| |||   ||||||| ||||||| | || | || | |||||| ||||||| |||| ||||    
T  1371270 tttaagtatttcaaatttaataattattcttttaaaaagtcaacttccacaattttcaatgcattgaatatacgatttttca-taaaaacctacctttta 1371172  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacatttccc 300  Q
    ||||| || ||||||  ||  ||||||||||||||||||||||    
T  1371171 aagtgttttaagagt-acatcggggcactcgttaacatttccc 1371130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 26669385 - 26669292
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    ||||||||  ||| ||||| ||||||||||||| ||||||| ||||||||||||| || || | | || ||| |||||||||||||||| ||||    
T  26669385 tttaagcacttcatatttaataattattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcattaaaaatttac 26669292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 12802065 - 12801965
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggc-tattaaatttctaatgagataattaatta 147  Q
    |||||||||||||||| ||||| |||| |  ||||||||||||||||||||| || |||||||| || || ||||| ||||||| | |||  ||||||||    
T  12802065 ataataattatattagctatttgtcaatttggagccttaattgattagtgatcaatttaagtaataaagcttattagatttctatttagaatattaatta 12801966  T
Q  148 a 148  Q
    |    
T  12801965 a 12801965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 1105947 - 1106046
Alignment:
Q  50 taataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    ||||||||||||| | |||||||||| ||| ||  ||| |||||||||| | ||||||| | | ||||||||||||||| |||  | |||||||||||||    
T  1105947 taataattatatttgatatttatcaattgtaagttttatttgattagtgttcaaattaaatgataaggctattaaatttttaactacataattaattaaa 1106046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 512 - 567
Target Start/End: Original strand, 17581620 - 17581675
Alignment:
Q  512 tgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctt 567  Q
    |||||||||||||  ||||||  |||||| ||||||||||||||||||||||||||    
T  17581620 tgttgagagggctgtcatgaaagctttatccaggtattcctaataccctaattctt 17581675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 672
Target Start/End: Original strand, 18778634 - 18778721
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||||||||| |||||| ||||||||||||| || ||||| ||||||||||||| |  | || |||||||||| || |||||||||    
T  18778634 ataaatcaaatacgtcgtagatccgatcataattatgttcaacgttttgtttgcttccgctattgattcataattattgaacatgttt 18778721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 407 - 465
Target Start/End: Original strand, 25343506 - 25343564
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaac 465  Q
    ||||||| |||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  25343506 aagagaacttgaggcataaaggtaccggttgaggaagaaccaaatcagccgccgctaac 25343564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 466
Target Start/End: Complemental strand, 21197308 - 21197249
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaacc 466  Q
    ||||||| ||||||||||||  ||||||||||| ||||| ||||||||||  ||||||||    
T  21197308 aagagaacttgaggcataaagataccggttgaggaagaaccaaatcagccgccgctaacc 21197249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 406
Target Start/End: Complemental strand, 21783661 - 21783615
Alignment:
Q  362 agaggctatggt--ccccaatacacggtacacggcaaaactctctct 406  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||    
T  21783661 agaggctatggtgtccccaatacaccgtacacggcaaaactctctct 21783615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 406
Target Start/End: Complemental strand, 21789884 - 21789838
Alignment:
Q  362 agaggctatggt--ccccaatacacggtacacggcaaaactctctct 406  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||    
T  21789884 agaggctatggtgtccccaatacaccgtacacggcaaaactctctct 21789838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 9301908 - 9302053
Alignment:
Q  158 tttaagcatctcaaatttagtaattattc-ttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattt 256  Q
    |||||| |||| ||||||||||||||||| |||| |||| || || ||||  |||||||||||| | || | ||||| ||||| |||||||||  |||||    
T  9301908 tttaaggatcttaaatttagtaattattctttttaaaaaatcaacaattattatttccaatgcattgaatatacaacgtttca-taaaaacttgtcattt 9302006  T
Q  257 aaagtgcttaaagagtgtcacaggggcactcgttaacatttccctta 303  Q
    ||| | | |||||||| || ||| |||||  |||||| |||| ||||    
T  9302007 aaaatacgtaaagagtatcccagaggcacatgttaacctttctctta 9302053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 587 - 640
Target Start/End: Original strand, 17581678 - 17581732
Alignment:
Q  587 taaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    ||||||||| |||||||| |||| || |||||||| |||||||||||||||||||    
T  17581678 taaatcaaacatgtcgtagatcctataataatcatgttcaatgttttgtttgctt 17581732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 69; Significance: 2e-30; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 5600 - 5700
Alignment:
Q  49 ataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaa 148  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | | |||||| |||||||||  |||||||||||||    
T  5600 ataataattatattagttatttatcaattgtgagccttaattgattagtgatcaaattaagtaatatgactattagatttctaattcgataattaattaa 5699  T
Q  149 a 149  Q
    |    
T  5700 a 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 468
Target Start/End: Original strand, 5834 - 5887
Alignment:
Q  415 ttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccct 468  Q
    ||||||||||||||||||||||||| ||||| ||||| || | |||||||||||    
T  5834 ttgaggcataaatgtaccggttgaggaagaaccaaattagtcgtcgctaaccct 5887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 636
Target Start/End: Original strand, 5974 - 6025
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgttt 636  Q
    |||||||||| |||||||| ||||||||||| |||| |||||||||||||||    
T  5974 ataaatcaaacatgtcgtagatccgatcatattcatgttcaatgttttgttt 6025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 68; Significance: 6e-30; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 1127 - 1028
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||| |||||||||| |||||||||  |||||||||||    
T  1127 taataataattatattagttatttatcaattgtgagtcttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaatt 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 640
Target Start/End: Complemental strand, 953 - 672
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  953 agaggctatggtccccaatacaccgtacacggcaaa-ctctctcttctccccatctgaagagaacttgaggcataaacgtaccggttgaggaagaaccaa 855  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||  || || | ||||||| || |||  |||||  |  |||| || | ||| |    |||||||| | |||||  |||||| |||||    
T  854 atcagccgccgctaaaactattgtgtgtttcagatcatcttctctctttggttatcgtcgttgatt----agagggctgctatgaaagctttatccaggt 759  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatcataatcat-ttcaatgttttgtttgctt 640  Q
    |||||||||||||||||||||  | |||||||||||||||        | |||||||| |||||||||||||||| |||||||||||||||||||    
T  758 attcctaataccctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatcataatcatgttcaatgttttgtttgctt 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 694 - 796
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||| ||||  ||| |||||||| |||    
T  694 taataataattatattagttatttatcaattgtgagcctcaattgattagtgatcaaattaagtaataaggctattagatttaaaatcagataattgatt 793  T
Q  147 aaa 149  Q
    |||    
T  794 aaa 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 791 - 848
Alignment:
Q  304 attaaatatttaattaattggtatggacccaatgagtg-atgtctagatgacccatta 360  Q
    ||||||||||||||||| || |||| || ||||||||| |||||||||||||||||||    
T  791 attaaatatttaattaactgatatgtactcaatgagtgaatgtctagatgacccatta 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 63; Significance: 6e-27; HSPs: 2)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 1712 - 1614
Alignment:
Q  51 aataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaattaaa 149  Q
    |||||||||||||| |||||||||| |||| |||||| |||||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||    
T  1712 aataattatattagctatttatcaattgtgggccttagttgattagtgatcaaattaagtaataaggctattagatttctaattggataattaattaaa 1614  T

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Target: scaffold0440; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 407 - 672
Target Start/End: Complemental strand, 1472 - 1215
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttcatat-atcacctctccgt--ttatgg 503  Q
    ||||||| ||||||||||||||||||||||||| || || |||||||| |  ||||||| || || | ||||||| || ||| ||||||  |  |||| |    
T  1472 aagagaacttgaggcataaatgtaccggttgaggaaaaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcg 1373  T
Q  504 ttgatgaatgttgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgt 603  Q
    ||| |||    |||||||| | || ||||  |||||| ||||||||||||||||||||||||||  | |||||||||||||||        | || ||||    
T  1372 ttgttga----tgagagggatgccttgaaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaa--------acatatcgt 1285  T
Q  604 acatccgatcataatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    | |||||||||||||||| ||||||||||||||||||| |    || ||||||||||||| |||||||||    
T  1284 agatccgatcataatcatgttcaatgttttgtttgcttccgcctttgattcataattgttgaacatgttt 1215  T

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Target: scaffold0268 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 182 - 298
Target Start/End: Complemental strand, 20330 - 20215
Alignment:
Q  182 tattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccatttaaagtgcttaaagagtgtcacaggg 281  Q
    ||||||||| ||||||  |||||||||||||| |||||| | || |||||||||||||| ||||||||| |||||||||||||||||||||||||    |    
T  20330 tattcttttaaaaagttaactattacaatttcaaatgcattaaatacacaacttttcat-aaaaacttatcatttaaagtgcttaaagagtgtcatgaag 20232  T
Q  282 gcactcgttaacatttc 298  Q
    |||||||||||||||||    
T  20231 gcactcgttaacatttc 20215  T

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Target: scaffold0012 (Bit Score: 61; Significance: 9e-26; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 173436 - 173316
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaattt 128  Q
    |||||| | |||||| | ||||||||||||||||||  ||||||||| |||| | |||| |||||||||||| ||||||||||| |||||||||| ||||    
T  173436 ttatgtgggcaaatatcgtaataataattatattagcgatttatcaattgtgggtcttagttgattagtgatcaaattaagtaataaggctattagattt 173337  T
Q  129 ctaatgagataattaattaaa 149  Q
    |||||  ||||||||||||||    
T  173336 ctaattggataattaattaaa 173316  T

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Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 586 - 672
Target Start/End: Complemental strand, 172998 - 172911
Alignment:
Q  586 ataaatcaaatatgtcgtacatccgatcataatca-tttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    |||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||| |  | || ||||||||||||  |||||||||    
T  172998 ataaattaaacatgtcgtagatccgatcataatcattttcaatgttttgtttgcttccgctattgattcataattgtagaacatgttt 172911  T

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Target: scaffold0012; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 173168 - 173094
Alignment:
Q  407 aagagaagttgaggcataaatgtaccggttgagtaagaatcaaatcagccatcgctaaccctgttctttgtttca 481  Q
    ||||||| |||||||||||| |||| ||||||| ||||| ||||||||||  ||||||| || || | |||||||    
T  173168 aagagaacttgaggcataaaggtactggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttca 173094  T

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Target: scaffold0208 (Bit Score: 60; Significance: 4e-25; HSPs: 4)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 12008 - 12099
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  12008 ttatgtgggcaaatatcgtaataataattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggcta 12099  T

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Target: scaffold0208; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 362 - 586
Target Start/End: Original strand, 6347 - 6582
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  6347 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 6446  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    |||||||||| || ||||  |||||| |||||    
T  6447 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagagggctgccttgaaagctttatccaggt 6542  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaa 586  Q
    |||||||||| ||||||||||  | |||||||||||||||    
T  6543 attcctaatagcctaattcttaatatccttgataaatcaa 6582  T

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Target: scaffold0208; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 6135 - 6226
Alignment:
Q  29 ttatgttgacaaataccttaataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggcta 120  Q
    |||||| | |||||| | ||||||||||||||||||||||||||||| |   |||||||||||||||||||| ||||||||||| |||||||    
T  6135 ttatgtgggcaaatatcgtaataataattatattagttatttatcaatttaaagccttaattgattagtgatcaaattaagtaataaggcta 6226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 586
Target Start/End: Original strand, 12220 - 12455
Alignment:
Q  362 agaggctatggtccccaatacacggtacacggcaaaactctctct------------aagagaagttgaggcataaatgtaccggttgagtaagaatcaa 449  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||            ||||||| |||||||||||| |||||||||||| ||||| |||    
T  12220 agaggctatggtccccaatacaccgtacacggcaatactctctcttctccccatctgaagagaacttgaggcataaaggtaccggttgaggaagaaccaa 12319  T
Q  450 atcagccatcgctaaccctgttctttgtttcatat-atcacctctc--cgtttatggttgatgaatgttgagagggcttccatgaacactttatacaggt 546  Q
    |||||||  ||||||| || || | ||||||| || ||| ||||||   | |||| |||| |||    ||||||| || || ||||  |||||| ||| |    
T  12320 atcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttga----tgagaggactgccttgaaagctttatccagat 12415  T
Q  547 attcctaataccctaattctttgtctccttgataaatcaa 586  Q
    |||||||||| ||||||||||  | |||||||||||||||    
T  12416 attcctaatagcctaattcttaatatccttgataaatcaa 12455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 158 - 297
Target Start/End: Original strand, 1065 - 1204
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    ||||||||||  ||| ||||||||||||||||| |||| || ||||||| ||||||||||||| |||| ||| || ||||||||||||||||   |||||    
T  1065 tttaagcatcataaaattagtaattattcttttgaaaaatcaactattataatttccaatgcattcaatacaaaatttttcattaaaaacttgttattta 1164  T
Q  258 aagtgcttaaagagtgtcacaggggcactcgttaacattt 297  Q
    || || ||||||| | || | | |||||||||||||||||    
T  1165 aaatgtttaaagaatatcccggaggcactcgttaacattt 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 13904 - 14006
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaaggctattaaatttctaatgagataattaatt 146  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||| ||||||| ||||||||||| ||  |||||| |||| ||||  |||||||||||    
T  13904 taataataattatattagctatttatcaatcgtgagccttaattgactagtgatcaaattaagtaataattctattagatttgtaattggataattaatt 14003  T
Q  147 aaa 149  Q
    |||    
T  14004 aaa 14006  T

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Target: scaffold0236 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 515 - 672
Target Start/End: Original strand, 5523 - 5673
Alignment:
Q  515 tgagagggcttccatgaacactttatacaggtattcctaataccctaattctttgtctccttgataaatcaataaatcaaatatgtcgtacatccgatca 614  Q
    |||||||||| || ||||  |||||| ||||||||||||||| ||||||||||  | |||||||||||||||        | |||||||| |||||||||    
T  5523 tgagagggctgccttgaaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaa--------acatgtcgtagatccgatca 5614  T
Q  615 taatcat-ttcaatgttttgtttgctttcattgttaattcataattgttaaacatgttt 672  Q
    ||||||| ||||||||||||||||||| |  | || ||||||||||||| |||||||||    
T  5615 taatcatgttcaatgttttgtttgcttccgctattgattcataattgttgaacatgttt 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 273
Target Start/End: Complemental strand, 103755 - 103640
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttaccattta 257  Q
    |||||||||||   ||||||||||||||||||| ||||||||| |||||||||||  |||||| |||| | |||| ||||||||||||| |||  ||||     
T  103755 tttaagcatctttgatttagtaattattcttttaaaaagtcgaatattacaatttttaatgcattcaatatacaatttttcattaaaaatttattatttt 103656  T
Q  258 aagtgcttaaagagtg 273  Q
    || |||||||||||||    
T  103655 aaatgcttaaagagtg 103640  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 335950 - 335866
Alignment:
Q  162 agcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaa 246  Q
    |||||| |||||||||||||||||| ||||||||||  | ||||| ||||| ||||| | || | ||||||||||||||||||||    
T  335950 agcatcccaaatttagtaattattcatttcaaaagttaattattataattttcaatgtattcgatacacaacttttcattaaaaa 335866  T

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Target: scaffold0085 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 38059 - 38129
Alignment:
Q  47 taataataattatattagttatttatcaagtgtgagccttaattgattagtgattaaattaagtaacaagg 117  Q
    ||||||||||| ||||||||||||||||| |   | |||||||||| ||||||| ||||||||||||||||    
T  38059 taataataattttattagttatttatcaatttgaaaccttaattgaatagtgatcaaattaagtaacaagg 38129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 1408 - 1501
Alignment:
Q  158 tttaagcatctcaaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaacttac 251  Q
    ||||||||  ||| ||||| ||||||||||||| ||||||| ||||||||||||| || || | | || ||| |||||||||||||||| ||||    
T  1408 tttaagcacttcatatttaataattattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcattaaaaatttac 1501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1444 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 1026 - 950
Alignment:
Q  170 aaatttagtaattattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaaa 246  Q
    |||||||| |||| ||||||| ||||||| ||||||||||||| ||||| | | || ||||| |||||||| |||||    
T  1026 aaatttagcaattgttcttttaaaaagtcaactattacaattttcaatgtattgaatacacatcttttcataaaaaa 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1444; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 1786 - 1723
Alignment:
Q  182 tattcttttcaaaagtcgactattacaatttccaatgcaatcaacacacaacttttcattaaaa 245  Q
    ||||||||| ||||| | ||||||||||||||||||||| | ||  ||||||||||||| ||||    
T  1786 tattcttttaaaaagccaactattacaatttccaatgcattgaatgcacaacttttcataaaaa 1723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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