View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16078_low_7 (Length: 377)

Name: NF16078_low_7
Description: NF16078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16078_low_7
NF16078_low_7
[»] chr2 (3 HSPs)
chr2 (26-306)||(41754526-41754802)
chr2 (28-304)||(3395607-3395877)
chr2 (30-248)||(5789028-5789244)
[»] chr8 (9 HSPs)
chr8 (20-304)||(23141942-23142223)
chr8 (20-306)||(42797432-42797713)
chr8 (20-307)||(13756200-13756476)
chr8 (93-304)||(10901547-10901753)
chr8 (29-209)||(21588990-21589165)
chr8 (261-305)||(41529080-41529124)
chr8 (254-304)||(15278111-15278161)
chr8 (254-304)||(15458480-15458530)
chr8 (261-305)||(18432525-18432569)
[»] chr4 (7 HSPs)
chr4 (21-304)||(50814456-50814733)
chr4 (28-304)||(13228353-13228624)
chr4 (29-209)||(39974599-39974775)
chr4 (29-221)||(49953180-49953374)
chr4 (80-221)||(281679-281816)
chr4 (254-304)||(24183795-24183845)
chr4 (264-304)||(42757967-42758007)
[»] chr3 (9 HSPs)
chr3 (20-304)||(50332073-50332353)
chr3 (29-205)||(12746150-12746321)
chr3 (29-139)||(36095931-36096041)
chr3 (261-305)||(17763829-17763873)
chr3 (261-305)||(19065149-19065193)
chr3 (254-304)||(6435579-6435629)
chr3 (262-304)||(42400680-42400722)
chr3 (261-295)||(50239320-50239354)
chr3 (260-304)||(20788204-20788248)
[»] chr7 (4 HSPs)
chr7 (95-304)||(15721438-15721643)
chr7 (261-306)||(29502513-29502558)
chr7 (261-304)||(17475014-17475057)
chr7 (261-304)||(17578157-17578200)
[»] chr6 (7 HSPs)
chr6 (95-304)||(1594479-1594684)
chr6 (20-100)||(1599542-1599622)
chr6 (28-135)||(26894729-26894835)
chr6 (183-295)||(26894613-26894725)
chr6 (262-304)||(28365452-28365494)
chr6 (263-304)||(20872244-20872285)
chr6 (260-305)||(33350577-33350622)
[»] scaffold0159 (1 HSPs)
scaffold0159 (30-248)||(33401-33617)
[»] chr1 (5 HSPs)
chr1 (28-289)||(43387253-43387509)
chr1 (262-308)||(30002059-30002105)
chr1 (260-305)||(19066029-19066074)
chr1 (260-305)||(19113919-19113964)
chr1 (260-304)||(8313153-8313197)
[»] scaffold0380 (1 HSPs)
scaffold0380 (28-139)||(14347-14458)
[»] chr5 (2 HSPs)
chr5 (29-221)||(33014030-33014218)
chr5 (28-125)||(38016086-38016182)
[»] scaffold0036 (1 HSPs)
scaffold0036 (160-235)||(50473-50548)
[»] scaffold0284 (1 HSPs)
scaffold0284 (260-309)||(3042-3091)
[»] scaffold0119 (1 HSPs)
scaffold0119 (263-308)||(40351-40396)
[»] scaffold0191 (1 HSPs)
scaffold0191 (253-304)||(4817-4868)


Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 26 - 306
Target Start/End: Original strand, 41754526 - 41754802
Alignment:
Q  26 cagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacat 125  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41754526 cagatatgatatcaccattgggacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacat 41754625  T
Q  126 tttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacata 225  Q
     |||||||||||||    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41754626 cttcatccaaaatt----taaagtcttaagtatatgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacata 41754721  T
Q  226 catttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagtat 306  Q
    ||||||||||||||||| |||||||  ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  41754722 catttaatactttacaacattctctcccttaaggatgacgaaattctagcccgtgcttggcacgggtgtccatgctagtat 41754802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 304
Target Start/End: Original strand, 3395607 - 3395877
Alignment:
Q  28 gatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    ||||||||||||||||||  |||||||||| || |||| ||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||    
T  3395607 gatatgatatcaccattggaacttatgggg-agacaacacttgtgtgaatcgacacgttgcagaaagagcaatcacacaagtgaaaatgatgttacattt 3395705  T
Q  128 tcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacataca 227  Q
    ||||||||||||    | ||| ||||| ||| ||| ||  |||| ||||||||  ||||||||||||||||||||||||||| |||| |||||||  |||    
T  3395706 tcatccaaaatt----ttaagacttaagtatatgatttattttttacttatttgttcttcaacctccaatattttatccaatgttgatatttaactgaca 3395801  T
Q  228 tttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
     || |||  | || |||||||||   || |   ||||| ||||| ||||||||||||||||||||||| || |||||    
T  3395802 cttgatatatcac-atattctctccattgaaaatgacgtaattctagcccgtgcttggcacgggtgtccatactagt 3395877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 5789028 - 5789244
Alignment:
Q  30 tatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatc--gacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||| ||||| ||||||||||||| |    
T  5789028 tatgatatcaacattgagacttatgggg-agccaacacttgtgtgaatgatgacacattgcagaaagagcaatcacacaagtgagaatgatgttacatct 5789126  T
Q  128 tcatccaaaattaatttaaagtcttaaatatgtgagttta-ttttcacttatttactcttcaacctccaatattttatccaatattgagatttaacatac 226  Q
    ||||||||    || || ||| ||||| |   | ||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||  ||    
T  5789127 tcatccaa----aacttcaagacttaactgaataagtctatttttcacttatttgttcttcaacctccaatgttttatccaatattgagatttaactgac 5789222  T
Q  227 atttaatactttacaatattct 248  Q
    | || |||| ||||||||||||    
T  5789223 acttgatacattacaatattct 5789244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 23141942 - 23142223
Alignment:
Q  20 ttgaaccagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatg 119  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23141942 ttgaagcagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatg 23142041  T
Q  120 ttacattttcatccaaaattaatttaaagtcttaaatatgtgagttt-attttcacttatttactcttcaacctccaatattttatccaatattgagatt 218  Q
    |||||| |||||||||||||    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23142042 ttacatcttcatccaaaatt----taaagtcttaagtatttgagttttattttcacttatttactcttcaacctccaatattttatccaatattgagatt 23142137  T
Q  219 taacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||||||||||||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  23142138 taacatacatttaatactttaaaatattctctcccttaaggatgacgaaattctagcccgtgcttggcacgggtgtccatgctagt 23142223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 20 - 306
Target Start/End: Original strand, 42797432 - 42797713
Alignment:
Q  20 ttgaaccagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatg 119  Q
    ||||| ||||||||||||||||||||||||||| | || ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42797432 ttgaagcagatatgatatcaccattgagacttacgagg-agcaaacacttgtgtgaatcgacacattgcagaaagagcaatcacacgagtgataatgatg 42797530  T
Q  120 ttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagattt 219  Q
    | |||| |||||||||||||    ||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  42797531 tcacatcttcatccaaaatt----taaagtcttaagtataagagtttattttcacttatttactctccaacctccaatattttatccaatattaagattt 42797626  T
Q  220 aacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagtat 306  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||  ||||||| ||||||||||||||| ||||||||||    
T  42797627 aacatacatttaatactttacaatattctctcccttaaggatgacgaaattttagcccgtacttggcacgggtgtccatgctagtat 42797713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 20 - 307
Target Start/End: Complemental strand, 13756476 - 13756200
Alignment:
Q  20 ttgaaccagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatg 119  Q
    ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  13756476 ttgaagcagatatgatatcaccattgggacttatgtggaagccaacgcttgtgtgaatcgacacattgcagaaagagcaatcacacaagtgataatgatg 13756377  T
Q  120 ttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagattt 219  Q
    |||||| |||||||||||||    ||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13756376 ttacatcttcatccaaaatt----taaagt-------atatgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagattt 13756288  T
Q  220 aacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagtata 307  Q
    |||||| ||||||||||||||||||||||||  ||||  | ||||||||||  ||||||||||||||||||||||| |||||||||||    
T  13756287 aacatatatttaatactttacaatattctctcccttagagatgacgaaattttagcccgtgcttggcacgggtgtccatgctagtata 13756200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 93 - 304
Target Start/End: Original strand, 10901547 - 10901753
Alignment:
Q  93 agagcaatcacacgagtgataatgatgttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacct 192  Q
    ||||||||| ||| ||||| ||||||||||||| |||||||||||||||      | ||||||||| | | ||  |||||| |||| |  ||||||||||    
T  10901547 agagcaatcgcacaagtgaaaatgatgttacatcttcatccaaaattaa------gacttaaatatataatttatttttcatttatatgttcttcaacct 10901640  T
Q  193 ccaatattttatccaatattgagatttaacata-catttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacggg 291  Q
    ||||||||||||||||| ||||||||||||  | || || |||| ||||||||||||||   || ||| ||||||||||| |||||||||||||||| ||    
T  10901641 ccaatattttatccaatgttgagatttaactgaacacttgatacattacaatattctctccattgaggatgacgaaattctagcccgtgcttggcacagg 10901740  T
Q  292 tgtctatgctagt 304  Q
    ||||||| |||||    
T  10901741 tgtctatactagt 10901753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 21588990 - 21589165
Alignment:
Q  29 atatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatttt 128  Q
    |||||||||||||||||  ||||| ||||||| |||| ||||||||| ||||||||||||| ||| | ||| |||||  |||| ||||||||  ||| ||    
T  21588990 atatgatatcaccattggaacttacgggggagacaacacttgtgtgattcgacacattgcagaaaaaacaaccacacaggtgagaatgatgtcgcatctt 21589089  T
Q  129 catccaaaattaatttaaagtcttaaatatgtgagtttatttt-cacttatttactcttcaacctccaatattttatccaat 209  Q
    | | |||    ||||| ||| ||| | ||  ||||||| |||| |||||||||  ||||| |||||||||||||||||||||    
T  21589090 ctttcaa----aattttaaggctttagta--tgagttttttttccacttatttgttcttcgacctccaatattttatccaat 21589165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 41529080 - 41529124
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||    
T  41529080 tgacgaaattctagcccgtgcttggcacgggtgtccatactagta 41529124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 15278111 - 15278161
Alignment:
Q  254 ttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||| |||||||||||| ||||||||||||||||| || || ||||||||    
T  15278111 ttaagtttgacgaaattctagcccgtgcttggcacgagtttccatgctagt 15278161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 15458480 - 15458530
Alignment:
Q  254 ttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||| |||||||||||| ||||||||||||||||| || || ||||||||    
T  15458480 ttaagtttgacgaaattctagcccgtgcttggcacgagtttccatgctagt 15458530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 18432525 - 18432569
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    |||| |||||| ||||||||||||||||||||||| || ||||||    
T  18432525 tgacaaaattctagcccgtgcttggcacgggtgtccatactagta 18432569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 21 - 304
Target Start/End: Complemental strand, 50814733 - 50814456
Alignment:
Q  21 tgaaccagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgt 120  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50814733 tgaagcagatatgatatcaccattgggacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgt 50814634  T
Q  121 tacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagattta 220  Q
    ||||| |||||||||||||    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50814633 tacatcttcatccaaaatt----taaagtcttaagtatgtg--tttattttcacttatttactcttcaacctccaatattttatccaatattgagattta 50814540  T
Q  221 acatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||||||||||||||||||||| |||||||  ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  50814539 acatacatttaatactttacaacattctctcccttaaggatgacgaaattctagcccgtgcttggcacgggtgtccatgctagt 50814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 28 - 304
Target Start/End: Complemental strand, 13228624 - 13228353
Alignment:
Q  28 gatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||| || ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  13228624 gatatgatatcaccattgaaacttatgggg-agccaacacttgtgtgaatcaacgcattgcagaaagagcaatcacacaagtgaaaatgatgttacattt 13228526  T
Q  128 tcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacataca 227  Q
    |||| |||    ||||| ||| |||||  || ||| ||  |||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||   |||    
T  13228525 tcattcaa----aattttaagacttaaggatatgatttatttttcacttatttgttcttcaacctccaatatcttatccaatgttgatatttaagtgaca 13228430  T
Q  228 tttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
     || |||| | ||||||||||||   || |   ||||||||||| ||||||||||||||||||||||| || |||||    
T  13228429 cttgatacatcacaatattctctccattgaaaatgacgaaattctagcccgtgcttggcacgggtgtccatactagt 13228353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 209
Target Start/End: Complemental strand, 39974775 - 39974599
Alignment:
Q  29 atatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatttt 128  Q
    |||||||||||||||||  ||||| ||||||| |||| ||||||||| ||||||||||||| ||| | ||| |||||  |||| ||||||||  ||| ||    
T  39974775 atatgatatcaccattggaacttacgggggagacaacacttgtgtgattcgacacattgcagaaaaaacaaccacacaggtgagaatgatgtcgcatctt 39974676  T
Q  129 catccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaat 209  Q
    | |||||    ||||| ||| ||| | |||| |  ||| ||| |||||||||  ||||| |||||||||||||||||||||    
T  39974675 cttccaa----aattttaaggctttagtatgagtttttttttccacttatttgttcttcgacctccaatattttatccaat 39974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 49953180 - 49953374
Alignment:
Q  29 atatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatttt 128  Q
    ||||||||||||| ||| |||||| ||||||| |||| ||||||||| |||| |||||||| ||| | ||| ||||| ||||| ||||||||  | | ||    
T  49953180 atatgatatcaccgttgggacttacgggggagacaacacttgtgtgattcgaaacattgcagaaaaaacaaccacacaagtgagaatgatgtcgcgtctt 49953279  T
Q  129 catccaaaattaatttaaagtcttaaatatgtgagtttatttt------cacttatttactcttcaacctccaatattttatccaatattgagatttaa 221  Q
    |||||||||||    | ||| ||| | ||| ||||||| ||||      |||||||||  ||||| ||||| |||||||||||||||  ||||||||||    
T  49953280 catccaaaatt----ttaaggctttagtatatgagttttttttttctttcacttatttgttcttcgacctctaatattttatccaatgatgagatttaa 49953374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 281816 - 281679
Alignment:
Q  80 acacattgcataaagagcaatcacacgagtgataatgatgttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatt 179  Q
    |||||||||| ||| | ||| ||||| ||||| ||||||||  ||| |||||||||||||    | ||| ||| | ||| ||||||| ||||||||||||    
T  281816 acacattgcagaaaaaacaaccacacaagtgagaatgatgtcgcatcttcatccaaaatt----ttaaggctttagtatatgagttttttttcacttatt 281721  T
Q  180 tactcttcaacctccaatattttatccaatattgagatttaa 221  Q
    |  ||||| ||||||| |||||||||||||  ||||||||||    
T  281720 tgttcttcgacctccagtattttatccaatgatgagatttaa 281679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 24183795 - 24183845
Alignment:
Q  254 ttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||| |||| | ||||| ||||||||||||||||||||||| ||||||||    
T  24183795 ttaagtttgatggaattctagcccgtgcttggcacgggtgtccatgctagt 24183845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 42757967 - 42758007
Alignment:
Q  264 cgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||||||| ||||||||||||||||||||||| || |||||    
T  42757967 cgaaattctagcccgtgcttggcacgggtgtccatactagt 42758007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 50332073 - 50332353
Alignment:
Q  20 ttgaaccagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatg 119  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  50332073 ttgaagcagatatgatatcaccattgggacttatgggggagccaacgcttgtgtgaatcgtcacattgcagaaagagcaatcacacgagtgataatgatg 50332172  T
Q  120 ttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagattt 219  Q
    |||||| |||||||||||||    |||||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  50332173 ttacatcttcatccaaaatt----taaagtattaagtatatgagtttattttcacttatttactcttcaacctctaatattttatccaatattgagattt 50332268  T
Q  220 aacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||||||||| ||||| ||||||||||||||  ||||||| ||||||||||| ||||| ||||||||||| ||||| || |||||    
T  50332269 aacatacattcaatacattacaatattctctcccttaaggatgacgaaattctagcccatgcttggcacgagtgtccatcctagt 50332353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 205
Target Start/End: Original strand, 12746150 - 12746321
Alignment:
Q  29 atatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatttt 128  Q
    ||||||||||||||||| || |||  |||||| |||| ||||||||| |||| |||||||| | | ||||||||||| ||||| ||||||||  ||| ||    
T  12746150 atatgatatcaccattgggaattacaggggagacaacacttgtgtgattcgatacattgcagaga-agcaatcacacaagtgagaatgatgtcgcatctt 12746248  T
Q  129 catccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatc 205  Q
    ||||||||||   ||||| || ||   ||| ||||||| |||||||||||||  ||||| | |||||||||||||||    
T  12746249 catccaaaat---tttaaggt-tttggtatatgagttttttttcacttatttgttcttcgatctccaatattttatc 12746321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 36096041 - 36095931
Alignment:
Q  29 atatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatttt 128  Q
    ||||||||||||||||| ||| || ||||||  |||| ||||||||| ||||||||||||| ||| | ||| ||||   |||| ||||||||  ||| ||    
T  36096041 atatgatatcaccattgggacatacgggggatacaacacttgtgtgattcgacacattgcagaaaaaacaaccacaaaggtgagaatgatgtcgcatctt 36095942  T
Q  129 catccaaaatt 139  Q
    | |||||||||    
T  36095941 cttccaaaatt 36095931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 17763873 - 17763829
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||    
T  17763873 tgacgaaattctagcccgtgcttggcacgggtgtccatactagta 17763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 19065193 - 19065149
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||    
T  19065193 tgacgaaattctagcccgtgcttggcacgggtgtccatactagta 19065149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 6435629 - 6435579
Alignment:
Q  254 ttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||| |||||| ||||| |||||||||||||||||||| || ||||||||    
T  6435629 ttaagtttgacggaattctagcccgtgcttggcacgggtttccatgctagt 6435579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 42400680 - 42400722
Alignment:
Q  262 gacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||    
T  42400680 gacgacattctagcccgtgcttggcacgggtgtccatgctagt 42400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 50239354 - 50239320
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtc 295  Q
    ||||||||||| |||||||||||||||||||||||    
T  50239354 tgacgaaattctagcccgtgcttggcacgggtgtc 50239320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 20788248 - 20788204
Alignment:
Q  260 ttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||||||| || |||||||||||||||||||| || ||||||||    
T  20788248 ttgacgaaagtctagcccgtgcttggcacgggtttcaatgctagt 20788204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 95 - 304
Target Start/End: Original strand, 15721438 - 15721643
Alignment:
Q  95 agcaatcacacgagtgataatgatgttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctcc 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  15721438 agcaatcacacgagtgataatgatgttacatcttcatccaaaatt----taaagtcttaagtatatgagtttattttcacttatttactattcaacctcc 15721533  T
Q  195 aatattttatccaatattgagatttaacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||| |||||||||||| ||||    
T  15721534 aatattttatccaatattgagatttaacatacatttaatactttacaatattctctcccttaaggatgacgaaattctagcctgtgcttggcacgagtgt 15721633  T
Q  295 ctatgctagt 304  Q
    | ||||||||    
T  15721634 ccatgctagt 15721643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 29502513 - 29502558
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagtat 306  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||    
T  29502513 tgacgaaattctagcccgtgcttggcacgggtgtccatactagtat 29502558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 17475014 - 17475057
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||    
T  17475014 tgacaaaattctagcccgtgcttggcacgggtgtccatgctagt 17475057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 17578200 - 17578157
Alignment:
Q  261 tgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||    
T  17578200 tgacaaaattctagcccgtgcttggcacgggtgtccatgctagt 17578157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 95 - 304
Target Start/End: Complemental strand, 1594684 - 1594479
Alignment:
Q  95 agcaatcacacgagtgataatgatgttacattttcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctcc 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  1594684 agcaatcacacgagtgataatgatgttacatcttcatccaaaatt----taaagtcttaagtatatgagtttattttcacttatttactattcaacctcc 1594589  T
Q  195 aatattttatccaatattgagatttaacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacgggtgt 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||| |||||||||||| ||||    
T  1594588 aatattttatccaatattgagatttaacatacatttaatactttacaatattctctcccttaaggatgacgaaattctagcctgtgcttggcacgagtgt 1594489  T
Q  295 ctatgctagt 304  Q
    | ||||||||    
T  1594488 ccatgctagt 1594479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 1599622 - 1599542
Alignment:
Q  20 ttgaaccagatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaat 100  Q
    ||||| || ||||||||||||| ||| ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  1599622 ttgaagcatatatgatatcacctttgggacttatgggggagccaatacttgtgtgaatcgacacattgcagaaagagcaat 1599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 26894835 - 26894729
Alignment:
Q  28 gatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    ||||| ||||||  |||| ||||||||||| |||||||  ||||||||||  |||||||||| |||||| |||||||| | ||| ||| ||||| ||| |    
T  26894835 gatattatatcattattgggacttatggggtagccaacagttgtgtgaatacacacattgcagaaagagaaatcacacaaatgagaat-atgtttcatct 26894737  T
Q  128 tcatccaa 135  Q
    ||||||||    
T  26894736 tcatccaa 26894729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 26894725 - 26894613
Alignment:
Q  183 tcttcaacctccaatattttatccaatattgagatttaacatacatttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgct 282  Q
    ||||||||||||||||||||||||||| ||||| ||||||  ||| ||  ||| | ||||||||||||   | || | ||||||||||| |||  ||| |    
T  26894725 tcttcaacctccaatattttatccaatgttgaggtttaactaacagttgttacatcacaatattctctccttcaaagatgacgaaattctagcttgtgat 26894626  T
Q  283 tggcacgggtgtc 295  Q
    || ||||||||||    
T  26894625 tgacacgggtgtc 26894613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 28365494 - 28365452
Alignment:
Q  262 gacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||    
T  28365494 gacgacattctagcccgtgcttggcacgggtgtccatgctagt 28365452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 20872285 - 20872244
Alignment:
Q  263 acgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    ||||||||| |||||||||||||||||||| |||| ||||||    
T  20872285 acgaaattctagcccgtgcttggcacgggtttctaagctagt 20872244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 33350577 - 33350622
Alignment:
Q  260 ttgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    ||||||||| || |||||||||||||||||||| || |||||||||    
T  33350577 ttgacgaaagtctagcccgtgcttggcacgggtttccatgctagta 33350622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 33401 - 33617
Alignment:
Q  30 tatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatc--gacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||||||   ||||||||||| ||||||||||||||| ||||| ||||||||||||| |    
T  33401 tatgatatcaacattgagacttatgggg-agccaacacttgtgtgaatgatgacacattgcagaaagagcaatcacacaagtgagaatgatgttacatct 33499  T
Q  128 tcatccaaaattaatttaaagtcttaaatatgtgagttta-ttttcacttatttactcttcaacctccaatattttatccaatattgagatttaacatac 226  Q
    ||||||||    || || ||| ||||| |   | ||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||  ||    
T  33500 tcatccaa----aacttcaagacttaactgaataagtctatttttcacttatttgttcttcaacctccaatgttttatccaatattgagatttaactgac 33595  T
Q  227 atttaatactttacaatattct 248  Q
    | || |||| ||||||||||||    
T  33596 acttgatacattacaatattct 33617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 43387253 - 43387509
Alignment:
Q  28 gatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    |||||||||||||||||| ||||||||||| | ||||| ||||||||||| |||||| || | ||| ||||||||||| ||||| ||| ||||||||| |    
T  43387253 gatatgatatcaccattgggacttatgggg-atccaacacttgtgtgaattgacacaatgtagaaaaagcaatcacacaagtgaaaataatgttacatct 43387351  T
Q  128 tcatccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacataca 227  Q
    ||||||||||||    | ||| ||||| ||| ||| ||  ||||||||||| |  ||||||||||||||||||||||||||  |||| ||||||   |||    
T  43387352 tcatccaaaatt----ttaagacttaagtatatgatttatttttcacttatatgttcttcaacctccaatattttatccaacgttgaaatttaattgaca 43387447  T
Q  228 tttaatactttacaatattctctttcttaaggttgacgaaattccagcccgtgcttggcacg 289  Q
     || || | | |||||||||||| | || ||| | ||||||||| | |||||||||||||||    
T  43387448 cttgatgcatcacaatattctctatattgaggataacgaaattctaacccgtgcttggcacg 43387509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 30002059 - 30002105
Alignment:
Q  262 gacgaaattccagcccgtgcttggcacgggtgtctatgctagtatat 308  Q
    ||||| |||| ||||||||||||||||| ||||| ||||||||||||    
T  30002059 gacgacattctagcccgtgcttggcacgagtgtccatgctagtatat 30002105  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 19066029 - 19066074
Alignment:
Q  260 ttgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    ||||||||| || |||||||||||||||||||| || |||||||||    
T  19066029 ttgacgaaagtctagcccgtgcttggcacgggtttccatgctagta 19066074  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 19113919 - 19113964
Alignment:
Q  260 ttgacgaaattccagcccgtgcttggcacgggtgtctatgctagta 305  Q
    ||||||||| || |||||||||||||||||||| || |||||||||    
T  19113919 ttgacgaaagtctagcccgtgcttggcacgggtttccatgctagta 19113964  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 8313197 - 8313153
Alignment:
Q  260 ttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  8313197 ttgacggaattctagcccgtgcttggcacggatgtccatgctagt 8313153  T

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Target: scaffold0380 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 14458 - 14347
Alignment:
Q  28 gatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacattt 127  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||| | |||| |||||||||| ||||| | | ||||||||| |    
T  14458 gatatgatatcaccattaagacttatggaggagccaacacttgtgtgaatcaacacattgaagaaagggcaatcacacaagtgagactaatgttacatct 14359  T
Q  128 tcatccaaaatt 139  Q
    ||||||||||||    
T  14358 tcatccaaaatt 14347  T

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Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 33014030 - 33014218
Alignment:
Q  29 atatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacatttt 128  Q
    ||||||||||||||||| ||||||   ||||| |||| ||||||||| ||||||||||||| ||| | ||| ||||| ||||| ||||||||  ||||||    
T  33014030 atatgatatcaccattgggacttacatgggagacaacacttgtgtgattcgacacattgcagaaaaaacaaccacacaagtgagaatgatgtcgcatttt 33014129  T
Q  129 catccaaaattaatttaaagtcttaaatatgtgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaa 221  Q
    |||| ||||||    | ||| ||| | ||| ||||||| |||||| ||||||  ||||| |||||||||||||||||||||  ||||||||||    
T  33014130 catctaaaatt----ttaagactttagtatatgagttttttttcatttatttgttcttcgacctccaatattttatccaatgatgagatttaa 33014218  T

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Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 38016086 - 38016182
Alignment:
Q  28 gatatgatatcaccattgagacttatgggggagccaacgcttgtgtgaatcgacacattgcataaagagcaatcacacgagtgataatgatgttacat 125  Q
    ||||||||||| |||||| ||||||||||| ||||| | |||||||||||||| | |||||| ||||||||||||||| ||| |||||||||||||||    
T  38016086 gatatgatatcgccattgggacttatgggg-agccagcacttgtgtgaatcgatatattgcagaaagagcaatcacacaagtaataatgatgttacat 38016182  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 50473 - 50548
Alignment:
Q  160 tgagtttattttcacttatttactcttcaacctccaatattttatccaatattgagatttaacatacatttaatac 235  Q
    ||||||| |||||||||||||| |||  |||||||||||||||||||||| | ||||||||||  ||| |||||||    
T  50473 tgagttttttttcacttatttattctctaacctccaatattttatccaatgtggagatttaactcacacttaatac 50548  T

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Target: scaffold0284 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 3042 - 3091
Alignment:
Q  260 ttgacgaaattccagcccgtgcttggcacgggtgtctatgctagtatatt 309  Q
    |||||||||||| ||||||||||||||||||||||| || ||||| ||||    
T  3042 ttgacgaaattctagcccgtgcttggcacgggtgtccatactagtgtatt 3091  T

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Target: scaffold0119 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 40396 - 40351
Alignment:
Q  263 acgaaattccagcccgtgcttggcacgggtgtctatgctagtatat 308  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||||    
T  40396 acgaaattctagcccgtgcttggcacgggtttctaagctagtatat 40351  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 4868 - 4817
Alignment:
Q  253 cttaaggttgacgaaattccagcccgtgcttggcacgggtgtctatgctagt 304  Q
    |||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  4868 cttaagtttgacggaattctagcccgtgcttggcacggatgtccatgctagt 4817  T

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