View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16079_high_1_N (Length: 456)

Name: NF16079_high_1_N
Description: NF16079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16079_high_1_N
NF16079_high_1_N
[»] chr7 (51 HSPs)
chr7 (285-432)||(56330-56477)
chr7 (285-432)||(20478042-20478189)
chr7 (285-432)||(27666042-27666189)
chr7 (279-429)||(29996494-29996644)
chr7 (285-404)||(35401969-35402088)
chr7 (285-404)||(35403589-35403708)
chr7 (285-429)||(39859209-39859353)
chr7 (285-404)||(20479689-20479808)
chr7 (285-432)||(37115503-37115650)
chr7 (284-429)||(6602334-6602479)
chr7 (284-404)||(77984-78104)
chr7 (288-404)||(27664433-27664549)
chr7 (278-432)||(24228386-24228540)
chr7 (285-404)||(13169653-13169772)
chr7 (285-432)||(38474120-38474267)
chr7 (288-421)||(34776903-34777036)
chr7 (284-432)||(30940402-30940550)
chr7 (285-404)||(47384294-47384413)
chr7 (288-405)||(37796185-37796302)
chr7 (284-429)||(45359335-45359480)
chr7 (288-404)||(39857648-39857764)
chr7 (285-432)||(47386186-47386333)
chr7 (280-404)||(37113936-37114060)
chr7 (286-345)||(29994907-29994966)
chr7 (286-404)||(24226582-24226700)
chr7 (307-429)||(13168142-13168267)
chr7 (284-402)||(23904582-23904700)
chr7 (284-400)||(38549546-38549662)
chr7 (285-404)||(22155817-22155936)
chr7 (285-404)||(22211732-22211851)
chr7 (288-402)||(48227913-48228027)
chr7 (294-398)||(13039618-13039722)
chr7 (331-432)||(35693347-35693450)
chr7 (334-405)||(366747-366818)
chr7 (288-374)||(6605397-6605483)
chr7 (341-392)||(7401949-7402000)
chr7 (285-404)||(46437107-46437226)
chr7 (284-346)||(23906295-23906357)
chr7 (335-405)||(33038801-33038871)
chr7 (331-421)||(45463716-45463806)
chr7 (289-400)||(35691431-35691542)
chr7 (331-405)||(46996706-46996780)
chr7 (285-404)||(34774998-34775117)
chr7 (285-316)||(35693434-35693465)
chr7 (285-404)||(45361246-45361365)
chr7 (335-405)||(2167529-2167599)
chr7 (348-421)||(4322560-4322633)
chr7 (332-405)||(11682828-11682901)
chr7 (331-404)||(35344295-35344368)
chr7 (335-387)||(38613503-38613555)
chr7 (285-325)||(46439582-46439622)
[»] chr8 (59 HSPs)
chr8 (281-432)||(27691150-27691301)
chr8 (282-432)||(27406894-27407044)
chr8 (278-432)||(33708801-33708954)
chr8 (285-432)||(13282478-13282625)
chr8 (303-432)||(15305815-15305944)
chr8 (303-432)||(15486184-15486313)
chr8 (285-429)||(8609787-8609931)
chr8 (285-429)||(13108336-13108480)
chr8 (285-404)||(601674-601793)
chr8 (280-404)||(33762683-33762807)
chr8 (285-429)||(38547228-38547372)
chr8 (285-374)||(29237151-29237240)
chr8 (285-374)||(29239187-29239276)
chr8 (277-404)||(8608229-8608357)
chr8 (288-432)||(41825641-41825785)
chr8 (288-432)||(42941777-42941921)
chr8 (285-404)||(27692807-27692926)
chr8 (285-404)||(33761069-33761188)
chr8 (285-404)||(38548801-38548920)
chr8 (286-404)||(33707207-33707325)
chr8 (285-404)||(35509214-35509333)
chr8 (285-404)||(35510789-35510908)
chr8 (285-374)||(13106804-13106893)
chr8 (285-374)||(15308261-15308350)
chr8 (285-374)||(15488630-15488719)
chr8 (288-404)||(13283965-13284081)
chr8 (285-432)||(41042581-41042728)
chr8 (285-404)||(42943396-42943515)
chr8 (283-432)||(22272332-22272483)
chr8 (288-432)||(26242311-26242455)
chr8 (285-432)||(13486096-13486243)
chr8 (223-284)||(18645752-18645813)
chr8 (285-432)||(7745109-7745256)
chr8 (285-404)||(26238726-26238845)
chr8 (288-374)||(27404213-27404299)
chr8 (286-391)||(5036446-5036551)
chr8 (284-366)||(34681074-34681156)
chr8 (331-432)||(9673162-9673263)
chr8 (285-404)||(22273861-22273980)
chr8 (285-404)||(41823890-41824009)
chr8 (284-344)||(600759-600819)
chr8 (285-404)||(5038032-5038150)
chr8 (285-353)||(13484545-13484613)
chr8 (285-404)||(43262107-43262226)
chr8 (349-432)||(40339677-40339760)
chr8 (288-374)||(9671980-9672066)
chr8 (331-405)||(11788367-11788441)
chr8 (295-421)||(28433704-28433830)
chr8 (331-405)||(31821464-31821538)
chr8 (331-421)||(40020623-40020713)
chr8 (348-405)||(37526027-37526084)
chr8 (285-404)||(41040720-41040839)
chr8 (331-405)||(33750388-33750462)
chr8 (331-405)||(42897778-42897852)
chr8 (348-405)||(9184446-9184503)
chr8 (331-404)||(31201148-31201221)
chr8 (295-391)||(462388-462484)
chr8 (295-391)||(32822371-32822467)
chr8 (295-391)||(33160166-33160262)
[»] chr5 (37 HSPs)
chr5 (285-432)||(29621758-29621905)
chr5 (281-432)||(42473584-42473735)
chr5 (288-432)||(40780553-40780697)
chr5 (285-432)||(2854304-2854450)
chr5 (285-432)||(24541188-24541336)
chr5 (285-429)||(17574318-17574462)
chr5 (284-432)||(36057590-36057738)
chr5 (283-429)||(7267841-7267987)
chr5 (285-404)||(40782181-40782300)
chr5 (285-404)||(2852886-2853005)
chr5 (279-374)||(7269446-7269541)
chr5 (285-404)||(21842962-21843081)
chr5 (285-404)||(29620138-29620257)
chr5 (285-432)||(34327635-34327782)
chr5 (285-421)||(8539675-8539811)
chr5 (285-429)||(2179787-2179931)
chr5 (285-404)||(12738706-12738825)
chr5 (285-404)||(12801529-12801648)
chr5 (282-404)||(8541241-8541363)
chr5 (287-404)||(17577905-17578022)
chr5 (284-429)||(30468260-30468405)
chr5 (288-432)||(18624985-18625129)
chr5 (285-374)||(30463900-30463989)
chr5 (285-374)||(42471548-42471637)
chr5 (285-404)||(28813735-28813856)
chr5 (288-404)||(28822060-28822176)
chr5 (341-392)||(27075876-27075927)
chr5 (285-404)||(34328797-34328916)
chr5 (331-405)||(18728606-18728680)
chr5 (331-405)||(32087560-32087634)
chr5 (285-374)||(32134231-32134320)
chr5 (295-376)||(43492131-43492212)
chr5 (295-391)||(38596878-38596974)
chr5 (331-405)||(35395379-35395453)
chr5 (335-405)||(43318064-43318134)
chr5 (331-392)||(19997164-19997225)
chr5 (288-372)||(41493847-41493931)
[»] chr1 (50 HSPs)
chr1 (285-432)||(9121645-9121792)
chr1 (285-432)||(47013059-47013206)
chr1 (288-432)||(33602621-33602765)
chr1 (285-432)||(46583533-46583680)
chr1 (285-429)||(4855946-4856090)
chr1 (285-429)||(34778118-34778262)
chr1 (283-404)||(37345932-37346053)
chr1 (285-404)||(46582010-46582129)
chr1 (285-374)||(34776569-34776658)
chr1 (285-432)||(2869579-2869726)
chr1 (285-404)||(8167942-8168061)
chr1 (285-404)||(8169538-8169657)
chr1 (285-404)||(25276742-25276861)
chr1 (285-374)||(26223587-26223676)
chr1 (285-429)||(6818658-6818802)
chr1 (285-429)||(25278348-25278492)
chr1 (285-429)||(31238475-31238619)
chr1 (285-404)||(9120039-9120158)
chr1 (285-404)||(27089249-27089368)
chr1 (282-429)||(37344339-37344486)
chr1 (285-432)||(27087283-27087430)
chr1 (285-432)||(51896129-51896276)
chr1 (285-404)||(47011456-47011575)
chr1 (284-374)||(4854409-4854499)
chr1 (278-387)||(25278975-25279084)
chr1 (285-404)||(1444151-1444270)
chr1 (285-432)||(3013447-3013600)
chr1 (285-428)||(50556078-50556221)
chr1 (363-432)||(1442599-1442668)
chr1 (285-404)||(31236819-31236938)
chr1 (296-402)||(33599229-33599335)
chr1 (331-432)||(15104487-15104588)
chr1 (285-404)||(52641888-52642007)
chr1 (285-404)||(2871046-2871165)
chr1 (288-376)||(52643648-52643736)
chr1 (285-404)||(37088106-37088225)
chr1 (286-400)||(50554164-50554278)
chr1 (288-404)||(3011858-3011974)
chr1 (285-365)||(25278854-25278934)
chr1 (285-346)||(33599187-33599248)
chr1 (286-346)||(1442551-1442611)
chr1 (286-346)||(6816866-6816926)
chr1 (288-404)||(51894570-51894686)
chr1 (335-405)||(42134532-42134602)
chr1 (348-421)||(5783427-5783500)
chr1 (285-374)||(23577636-23577725)
chr1 (285-322)||(45044949-45044986)
chr1 (335-391)||(18183961-18184017)
chr1 (331-391)||(36895528-36895588)
chr1 (331-404)||(27940654-27940727)
[»] chr4 (46 HSPs)
chr4 (284-432)||(43519423-43519571)
chr4 (284-404)||(4173710-4173830)
chr4 (285-404)||(43507167-43507286)
chr4 (285-404)||(43508623-43508742)
chr4 (286-432)||(49523125-49523271)
chr4 (288-432)||(41761723-41761867)
chr4 (284-404)||(33265980-33266100)
chr4 (285-404)||(319273-319392)
chr4 (285-404)||(835012-835131)
chr4 (285-404)||(4169686-4169805)
chr4 (285-404)||(5437811-5437930)
chr4 (285-404)||(33264382-33264501)
chr4 (285-404)||(51013856-51013975)
chr4 (285-404)||(833223-833342)
chr4 (285-404)||(5439617-5439736)
chr4 (285-429)||(51011926-51012070)
chr4 (285-404)||(320870-320989)
chr4 (276-432)||(41781530-41781686)
chr4 (285-404)||(35401749-35401868)
chr4 (284-432)||(48813786-48813934)
chr4 (285-429)||(35404425-35404569)
chr4 (285-404)||(49524703-49524822)
chr4 (295-404)||(39345574-39345683)
chr4 (285-404)||(20493827-20493946)
chr4 (285-432)||(42980629-42980782)
chr4 (290-374)||(43521109-43521193)
chr4 (285-404)||(48645255-48645374)
chr4 (288-401)||(11601674-11601786)
chr4 (304-432)||(48646724-48646852)
chr4 (331-421)||(39083685-39083775)
chr4 (279-404)||(11254113-11254238)
chr4 (331-421)||(5484586-5484676)
chr4 (331-421)||(39921540-39921630)
chr4 (331-421)||(43779855-43779945)
chr4 (331-404)||(44794765-44794838)
chr4 (331-419)||(39189428-39189516)
chr4 (335-391)||(44558511-44558567)
chr4 (286-396)||(20819986-20820096)
chr4 (348-391)||(27624869-27624912)
chr4 (279-397)||(2691368-2691485)
chr4 (331-421)||(32652145-32652235)
chr4 (331-405)||(35996109-35996183)
chr4 (331-421)||(44994275-44994365)
chr4 (331-404)||(47941857-47941930)
chr4 (349-405)||(2827468-2827524)
chr4 (331-391)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (285-432)||(3294-3441)
scaffold0058 (285-432)||(4466-4613)
scaffold0058 (285-404)||(14313-14432)
[»] chr6 (32 HSPs)
chr6 (284-432)||(32455868-32456016)
chr6 (303-430)||(3456766-3456893)
chr6 (285-432)||(13613559-13613706)
chr6 (285-404)||(32518467-32518586)
chr6 (285-429)||(32439071-32439215)
chr6 (285-404)||(3480627-3480746)
chr6 (285-404)||(32454248-32454367)
chr6 (286-432)||(20523367-20523513)
chr6 (285-404)||(18645074-18645192)
chr6 (289-432)||(10568403-10568546)
chr6 (285-429)||(32516877-32517021)
chr6 (288-432)||(7372935-7373079)
chr6 (285-404)||(13610690-13610808)
chr6 (286-429)||(11355223-11355366)
chr6 (285-432)||(6899485-6899632)
chr6 (285-405)||(10569888-10570008)
chr6 (285-374)||(9400035-9400124)
chr6 (279-404)||(11357164-11357289)
chr6 (285-353)||(32437140-32437208)
chr6 (338-432)||(9398713-9398807)
chr6 (273-404)||(6902868-6902996)
chr6 (285-354)||(7371175-7371244)
chr6 (356-432)||(7049828-7049904)
chr6 (276-404)||(20525304-20525432)
chr6 (285-346)||(8605353-8605414)
chr6 (331-391)||(3018450-3018510)
chr6 (300-404)||(14338480-14338584)
chr6 (331-421)||(17952030-17952120)
chr6 (288-404)||(21068628-21068744)
chr6 (331-391)||(2968185-2968245)
chr6 (288-323)||(21091109-21091144)
chr6 (289-346)||(7049790-7049847)
[»] chr3 (62 HSPs)
chr3 (279-432)||(3152215-3152368)
chr3 (291-432)||(2660218-2660359)
chr3 (285-432)||(44794208-44794354)
chr3 (285-429)||(53190759-53190903)
chr3 (285-404)||(46308807-46308926)
chr3 (328-432)||(19987591-19987695)
chr3 (285-429)||(27899081-27899225)
chr3 (285-404)||(38193480-38193599)
chr3 (285-404)||(53094243-53094362)
chr3 (285-404)||(54900044-54900163)
chr3 (284-374)||(41979352-41979442)
chr3 (285-402)||(3150252-3150369)
chr3 (285-410)||(41977750-41977875)
chr3 (285-429)||(2226152-2226296)
chr3 (285-432)||(21348723-21348870)
chr3 (285-404)||(38191895-38192014)
chr3 (285-404)||(53187742-53187861)
chr3 (290-402)||(2661880-2661992)
chr3 (285-421)||(54898437-54898573)
chr3 (285-404)||(46310406-46310525)
chr3 (285-404)||(46611273-46611392)
chr3 (285-432)||(51684610-51684757)
chr3 (285-374)||(44795890-44795979)
chr3 (284-432)||(30599915-30600063)
chr3 (285-432)||(17515310-17515457)
chr3 (285-432)||(23293167-23293314)
chr3 (285-400)||(46609149-46609264)
chr3 (285-404)||(53092623-53092742)
chr3 (287-432)||(43765139-43765284)
chr3 (285-404)||(28626411-28626530)
chr3 (279-374)||(35903819-35903914)
chr3 (288-429)||(2377032-2377173)
chr3 (285-404)||(7883328-7883447)
chr3 (285-404)||(23291570-23291689)
chr3 (298-429)||(35905712-35905843)
chr3 (285-404)||(46112487-46112606)
chr3 (288-432)||(42279510-42279654)
chr3 (285-404)||(611192-611311)
chr3 (286-404)||(2378953-2379071)
chr3 (280-404)||(44267976-44268100)
chr3 (295-401)||(23774162-23774268)
chr3 (285-404)||(30598337-30598456)
chr3 (285-346)||(7884927-7884988)
chr3 (288-404)||(42282443-42282559)
chr3 (285-401)||(51686367-51686483)
chr3 (363-429)||(7884873-7884939)
chr3 (295-405)||(45898352-45898462)
chr3 (284-401)||(48829355-48829472)
chr3 (331-432)||(46197766-46197867)
chr3 (285-365)||(600725-600805)
chr3 (341-405)||(25535253-25535317)
chr3 (343-405)||(23876982-23877044)
chr3 (295-405)||(23888776-23888886)
chr3 (295-405)||(40508915-40509025)
chr3 (331-405)||(48633923-48633997)
chr3 (288-402)||(54412519-54412633)
chr3 (339-432)||(48830803-48830896)
chr3 (295-391)||(2977347-2977443)
chr3 (360-432)||(44276193-44276265)
chr3 (285-404)||(21350575-21350694)
chr3 (335-405)||(33113184-33113254)
chr3 (285-404)||(46114075-46114195)
[»] chr2 (37 HSPs)
chr2 (285-432)||(6785978-6786125)
chr2 (285-432)||(37020508-37020655)
chr2 (285-410)||(24208061-24208186)
chr2 (279-432)||(39664745-39664898)
chr2 (285-421)||(16763076-16763212)
chr2 (280-404)||(24205593-24205717)
chr2 (285-404)||(14387349-14387468)
chr2 (285-404)||(37022155-37022274)
chr2 (285-432)||(40560223-40560370)
chr2 (285-432)||(14389081-14389228)
chr2 (285-404)||(16764581-16764700)
chr2 (279-404)||(2577450-2577575)
chr2 (285-430)||(44709744-44709889)
chr2 (285-429)||(19908246-19908391)
chr2 (280-432)||(2766929-2767081)
chr2 (288-432)||(17696209-17696353)
chr2 (289-432)||(42519202-42519346)
chr2 (285-404)||(40561848-40561967)
chr2 (285-374)||(6783364-6783453)
chr2 (284-404)||(39663153-39663273)
chr2 (285-404)||(16376736-16376855)
chr2 (285-397)||(19581414-19581526)
chr2 (288-404)||(19906685-19906801)
chr2 (284-391)||(6797506-6797613)
chr2 (285-432)||(39455169-39455316)
chr2 (334-429)||(16377197-16377292)
chr2 (284-354)||(34400313-34400383)
chr2 (331-421)||(11023001-11023091)
chr2 (279-404)||(39456750-39456875)
chr2 (285-324)||(42517558-42517597)
chr2 (331-405)||(26584821-26584895)
chr2 (335-391)||(37417323-37417379)
chr2 (341-392)||(4046352-4046403)
chr2 (288-346)||(6799436-6799494)
chr2 (334-405)||(29909664-29909735)
chr2 (295-405)||(11315339-11315449)
chr2 (335-391)||(15432378-15432434)
[»] scaffold1712 (1 HSPs)
scaffold1712 (285-404)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (285-404)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (288-429)||(1266-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (279-404)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (287-376)||(8264-8353)


Alignment Details
Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 56330 - 56477
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||| ||| |||||||||| |||||||| |||||||||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 20478042 - 20478189
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 27666189 - 27666042
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||| ||||||||||| |||| | |||||| ||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 279 - 429
Target Start/End: Complemental strand, 29996644 - 29996494
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  29996644 aaaaacgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttaca 29996545  T
Q  379 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||||||||||||  |||||||| || |||| |||||||| |||||||||    
T  29996544 gacgtccatcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 35401969 - 35402088
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35402068  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  35402069 aatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    | |||||   ||||||||||| ||||  ||||||||| |||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 20479808 - 20479689
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 20479709  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  20479708 aatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||| ||||||||| ||||||| | |||||| ||| |||||||||| | ||||||| | ||||| ||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaatt-cgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgt 37115552  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  37115551 ccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 429
Target Start/End: Original strand, 6602334 - 6602479
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||| |||||||||| ||||||||||| |||||||| | ||  |  |||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  6602334 ggactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 6602433  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6602434 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 78104 - 77984
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| | |||||||||||| ||||||||||||   | | |     
T  78104 ggactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgc 78005  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||||||||||    
T  78004 caatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  388 caaatcagtccctccgt 404  Q
    |||||||||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 278 - 432
Target Start/End: Complemental strand, 24228540 - 24228386
Alignment:
Q  278 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 377  Q
    |||||| || ||||||||||| ||||| |||||||||| |||||| | | || |||||||||||||||| ||||||||| | |||||| |||||||||||    
T  24228540 taaaaatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttac 24228441  T
Q  378 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||   |||||| |||| ||||  ||| ||||| ||||||||||    
T  24228440 agacgtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || || ||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||| ||||||| ||||||||   || |||||||||||||||| ||||||||| | ||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
     ||||||   |||| |||||| ||||  ||||||||| ||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 34777036 - 34776903
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||||||||||||||| ||| |||||| |||||| | | || ||| | |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||   ||||||||||| ||||  |||||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagt 34776903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 284 - 432
Target Start/End: Complemental strand, 30940550 - 30940402
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||| ||||| || |||||||||| |||||||| | || |||||| || |||||| ||||||||| | ||||||||||||||||||| ||||    
T  30940550 ggactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgt 30940451  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
     |||||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  30940450 tcatcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 47384294 - 47384413
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||   | || ||||||| |||||||| ||||||||| |||||||||| ||||||   | | |||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtc 47384393  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  47384394 aatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 405
Target Start/End: Complemental strand, 37796302 - 37796185
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||| ||||||||||||| |||||||  | || |||||||   |||||| ||||||||| | |||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  388 caaatcagtccctccgtc 405  Q
    ||||  ||||||||||||    
T  37796202 caaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 429
Target Start/End: Original strand, 45359335 - 45359480
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||| ||||| |||| |||||||| ||||||||   || | ||||| |||||||| ||||||||| | ||||||| ||||||||||||||||    
T  45359335 ggactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgt 45359434  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||||||   |||||||| || ||||  ||||||||| |||||||    
T  45359435 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  388 caaatcagtccctccgt 404  Q
    |||||||||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 47386333 - 47386186
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||||||||||| |||||| ||||||| | |||||| ||||| |||||||| ||||||||  | |||||| || ||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaatt-cgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgt 47386235  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||   |||  |||||| ||||  ||||||||| ||||||||||    
T  47386234 ccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 280 - 404
Target Start/End: Original strand, 37113936 - 37114060
Alignment:
Q  280 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 379  Q
    |||| ||||||||||||||||||||||||||||||| |||||| |   || ||| |||||||||||| ||||||||| | ||||||||| |||||   |     
T  37113936 aaaaagactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaa 37114035  T
Q  380 acgtccatcaaatcagtccctccgt 404  Q
    | ||| |||||||||||||||||||    
T  37114036 atgtcaatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaattt 345  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||||||||||||||||||||||||| |||||||| | || ||||||| |||||||| ||||||| | | || |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  386 atcaaatcagtccctccgt 404  Q
    |||||||||||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 429
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  307 ttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccct---gaattttacagacgtccatcaaatcagtccctccg 403  Q
    ||||||||| |||||||| | || ||||||| |||||||| ||||||||| | |||||||||   |||||||||||||||||||||||   |||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  404 tctaaaatgtccgttagtagtgatga 429  Q
    || ||||  ||||||||| |||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 23904582 - 23904700
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||||||||||||||||||| ||||||||   || |||||| ||||||||| | ||||| | | ||||||| |||||||   | | ||    
T  23904582 ggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgt 23904681  T
Q  384 ccatcaaatcagtccctcc 402  Q
    | |||||||||||||||||    
T  23904682 caatcaaatcagtccctcc 23904700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 400
Target Start/End: Original strand, 38549546 - 38549662
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||| ||||||||||||||||||| |||||||  | || ||||||||||||||||  |||||||| | ||| |||  ||||||   | | ||    
T  38549546 ggactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgt 38549645  T
Q  384 ccatcaaatcagtccct 400  Q
    |||||||||||||||||    
T  38549646 ccatcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 22155936 - 22155817
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||| || |||||||||||||||| |||||||| | || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  22155836 aatcaaatcagtccctccgt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 22211851 - 22211732
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||| || |||||||||||||||| |||||||| | || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  22211751 aatcaaatcagtccctccgt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 48228027 - 48227913
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||| ||||||||| ||||||||   || ||||||  |||||||| ||||||||| | || ||||||||||||   | | ||| ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  388 caaatcagtccctcc 402  Q
    |||||||||||||||    
T  48227927 caaatcagtccctcc 48227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 13039722 - 13039618
Alignment:
Q  294 ctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 393  Q
    ||||| |||||||||||||||| ||||||| |  || ||||||||| |||||| ||||||| | | ||||||||||||||||  | | ||| ||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  394 agtcc 398  Q
    |||||    
T  13039622 agtcc 13039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 35693450 - 35693347
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatca--aattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 428  Q
    ||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||   |||||||| || ||||  || |||||| ||||||    
T  35693450 ttcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatg 35693351  T
Q  429 atgt 432  Q
    ||||    
T  35693350 atgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 405
Target Start/End: Original strand, 366747 - 366818
Alignment:
Q  334 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||||||| ||||||||||||| ||||||| | ||||||| || |||||||||| ||||||| | | |||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattt-gttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  341 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 392  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 46437107 - 46437226
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||  | || ||||||  |||||||| ||||||| | | || |||| |||||||   | | |||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 46437206  T
Q  385 catcaaatcagtccctccgt 404  Q
     | |||||||||||||||||    
T  46437207 aaccaaatcagtccctccgt 46437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 23906357 - 23906295
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    ||||||||||||||||||| |||||||||||| |||||||| | || ||||||||| ||||||    
T  23906357 ggactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 33038871 - 33038801
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||   |||||||||||    
T  33038871 tccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaaggtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 45463716 - 45463806
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  45463716 ttcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 400
Target Start/End: Original strand, 35691431 - 35691542
Alignment:
Q  289 aatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 388  Q
    ||||||||||||||||||||||||||| ||||||||   || |||||| || |||||| ||||||| | | || |||| |||||||   | | ||| |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  389 aaatcagtccct 400  Q
    ||||||||||||    
T  35691531 aaatcagtccct 35691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 46996780 - 46996706
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||   |||||||||||    
T  46996780 ttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 34774998 - 34775117
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||||||| ||||||||| ||||||||   || ||| | | |||||||| | ||||| | | |||||||||||||||   | |  ||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatc 34775097  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  34775098 aatcaaatcagtccctccgt 34775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 316
Target Start/End: Complemental strand, 35693465 - 35693434
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttg 316  Q
    ||||||||||||||||||||||||||||||||    
T  35693465 gactaatacctcaaattcgtccttgaattttg 35693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||| |||||||||||| |||||| |   ||||| || |||||||||| | |||||   | ||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 2167529 - 2167599
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167529 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 421
Target Start/End: Complemental strand, 4322633 - 4322560
Alignment:
Q  348 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  ||||||||||| |||| ||||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgttagt 4322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 11682828 - 11682901
Alignment:
Q  332 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | ||||||||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtc 11682901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 404  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 38613555 - 38613503
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613555 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 46439622 - 46439582
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcga 325  Q
    |||||||| |||||||||||| ||||||||| |||||||||    
T  46439622 gactaatatctcaaattcgtcattgaatttttaaaaatcga 46439582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 281 - 432
Target Start/End: Original strand, 27691150 - 27691301
Alignment:
Q  281 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27691150 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaga 27691249  T
Q  381 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||| ||||||||||| |||| |||||| | ||||||||||||    
T  27691250 cgtccatcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 282 - 432
Target Start/End: Complemental strand, 27407044 - 27406894
Alignment:
Q  282 aaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 381  Q
    |||||||||||||||||| | |||||||||||||||||||| | | |||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  27407044 aaggactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagac 27406945  T
Q  382 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  27406944 gtccatcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 278 - 432
Target Start/End: Complemental strand, 33708954 - 33708801
Alignment:
Q  278 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 377  Q
    |||| |||||||||||||||||||| |||||||||||| |||||  | ||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  33708954 taaataggactaatacctcaaattcatccttgaattttaaaaaacggtcaa-tttcgtccctgaattttgcgaaatattaaattagtccctgaattttac 33708856  T
Q  378 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    | |||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  33708855 aaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 303 - 432
Target Start/End: Original strand, 15305815 - 15305944
Alignment:
Q  303 gtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 402  Q
    |||||||||||||||||||| |   ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  403 gtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||| ||||| |||||||  |||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 303 - 432
Target Start/End: Original strand, 15486184 - 15486313
Alignment:
Q  303 gtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 402  Q
    |||||||||||||||||||| |   ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  403 gtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||| ||||| |||||||  |||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 8609931 - 8609787
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||| |||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||||||||||||||||| |||||||| | || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  | ||||||| |||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 601793 - 601674
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 601694  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  601693 aatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 280 - 404
Target Start/End: Complemental strand, 33762807 - 33762683
Alignment:
Q  280 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 379  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   |     
T  33762807 aaaatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaa 33762708  T
Q  380 acgtccatcaaatcagtccctccgt 404  Q
    | ||| ||||||||| |||||||||    
T  33762707 atgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 285 - 429
Target Start/End: Original strand, 38547228 - 38547372
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||| |||||||||||||||| |||||||| | || | ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   |||||||| || ||||  ||||||||| |||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 277 - 404
Target Start/End: Original strand, 8608229 - 8608357
Alignment:
Q  277 ataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctg-aatttttcgaaatatcaaattagtccctgaatttt 375  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||| |||||| |||||||||||||||||||||||||||     
T  8608229 ataaaaaggactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattta 8608328  T
Q  376 acagacgtccatcaaatcagtccctccgt 404  Q
      | | ||| |||||||||||||||||||    
T  8608329 taaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 41825785 - 41825641
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| ||||||| |  || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   ||| ||||||| ||||  || |||||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 288 - 432
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| |||||||  | || ||||||||||||||||  |||||||  | ||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||  |||||||||||| ||||| ||||||||| | ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 27692926 - 27692807
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  385 catcaaatcagtccctccgt 404  Q
     || ||||||||||||||||    
T  27692826 aattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 38548920 - 38548801
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||   | |  ||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  38548820 aatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 33707207 - 33707325
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||     
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  386 atcaaatcagtccctccgt 404  Q
    |||||||||||| ||||||    
T  33707307 atcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 35509214 - 35509333
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||||||||| |||||    
T  35509314 aatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||  ||||||||||||||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 13284081 - 13283965
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  388 caaatcagtccctccgt 404  Q
    |||||||||||||||||    
T  13283981 caaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||| |||| |||||||||||||| |||||| | | || || |||||||||||||  |||||||| | |||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 432
Target Start/End: Original strand, 22272332 - 22272483
Alignment:
Q  283 aggactaatacctcaaattcgtccttgaattttgaaaaa--tc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 379  Q
    ||||||||||||||||||||||| ||||||||| |||||  || | |||||| |||||||||||||| || |||||| | |||||||||||||||||||     
T  22272332 aggactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaatt-cgtccctgaattttgcgtaatatctatttagtccctgaattttacaa 22272430  T
Q  380 acgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||  ||||||||| || ||||  ||||||||| ||||||||||    
T  22272431 acgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 26242455 - 26242311
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||||||||| ||||| |||||||||| |||||||  | || ||||||||| |||||| ||||||||| | |||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   ||||||||||| ||||  ||||||||| | ||||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 13486243 - 13486096
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| || |||||||||| ||||||||   |  |||||| ||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||| ||| ||||  ||| ||||||||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 18645752 - 18645813
Alignment:
Q  223 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645752 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 18645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 7745256 - 7745109
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||||||| ||||||||| |||||||  | || |||||| ||||||||| ||||||||  | |||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   |||||||| || ||||  ||||||||| ||||||||||    
T  7745156 catcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||  | || |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  385 catcaaatcagtccctccgt 404  Q
    ||||||||||||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 5036446 - 5036551
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||| |||||| ||||||| | |||||| ||||||||||||||  |||||||| | ||||||| |||||||||||||||||    
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaatt-cgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtc 5036544  T
Q  385 catcaaa 391  Q
     ||||||    
T  5036545 tatcaaa 5036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 366
Target Start/End: Complemental strand, 34681156 - 34681074
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtcc 366  Q
    |||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||||    
T  34681156 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 9673263 - 9673162
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 430  Q
    ||||||||||||||||  |||||||| | ||| ||||||||||||||||||||||||||||   ||||||||||||||||  | ||||||| ||||||||    
T  9673263 ttcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgat 9673164  T
Q  431 gt 432  Q
    ||    
T  9673163 gt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 22273980 - 22273861
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||||||||||| |||||||| | || || ||| ||||||||| | ||||||| | |||||||||||||||   | | |||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtc 22273881  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  22273880 aatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 41823890 - 41824009
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||| ||||||||||||||||||| |||||||  | |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 41823989  T
Q  385 catcaaatcagtccctccgt 404  Q
    ||||||||||||||||||||    
T  41823990 catcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 600759 - 600819
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatt 344  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||    
T  600759 ggactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| ||||||||| ||||||||   || ||||| | |||||||| ||||||| | | |||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 13484545 - 13484613
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaat 353  Q
    ||||||| ||||||||||||| ||||||||| |||||||| | || |||||||||||||||| ||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 43262226 - 43262107
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||| |||||| |||||||  | || |||| |||| |||||| ||||||||| | |||||||  ||||||   | | |||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 43262127  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||| ||||||    
T  43262126 aatcaaatcagtctctccgt 43262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  349 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||| | ||||||| ||||||||||||| ||||||||||   |||||| | || ||||  ||||||||||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 9671980 - 9672066
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||| ||||||||||||||||||| |  |||| |  || ||||||| |||||||| ||||||||| | |||||||| ||||||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 11788367 - 11788441
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 28433830 - 28433704
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    |||| ||||||| |||||||| ||  |||| | || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |      
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  395 gtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||||| |||| || |||||||    
T  28433730 gtccctccgtccaaaaggttcgttagt 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 31821464 - 31821538
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||   |||||||||||    
T  31821464 ttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaaggtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 40020713 - 40020623
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 40020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  348 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 41040720 - 41040839
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||| ||||||||| |||||||| | || |||||  ||||||||| | ||||| | | || |||| |||||||   | | |||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||| ||||||||||    
T  41040820 aatcaaatcggtccctccgt 41040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 33750462 - 33750388
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   |||||||||||    
T  33750462 ttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtc 33750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 42897852 - 42897778
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  42897852 ttcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  348 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 31201221 - 31201148
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 404  Q
    ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201221 ttcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 462484 - 462388
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||||| ||||||||| | | |||| | || ||| ||| | |||| | ||||||||||| ||||||| |||||||  || ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaa 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 32822371 - 32822467
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    |||| |||||||||||||||| |   |||| | || ||| ||||| |||| ||  ||||||||| |||||||||||||||  |||| ||||||||||    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaa 32822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 33160262 - 33160166
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||||||||||||||| | |  ||| | || ||| ||||| |||| |  |||||||||| |||||| ||||||||  |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaa 33160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 29621905 - 29621758
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 281 - 432
Target Start/End: Complemental strand, 42473735 - 42473584
Alignment:
Q  281 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 380  Q
    ||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  42473735 aaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacaga 42473636  T
Q  381 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||||||||||| |||||| |||||||||||||  |||||||||||    
T  42473635 cgtccatcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 288 - 432
Target Start/End: Original strand, 40780553 - 40780697
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||||||||||| |||||||||||||  |||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 2854450 - 2854304
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    || |||||  ||||||||||| |||| |||| ||| ||||||||||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 24541336 - 24541188
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  385 catcaaa-tcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||| |||   |||||||| |||| |||  ||| ||||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 429
Target Start/End: Original strand, 17574318 - 17574462
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 284 - 432
Target Start/End: Complemental strand, 36057738 - 36057590
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  36057738 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgt 36057639  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||   ||||||||||| ||||  ||||||| | ||||||||||    
T  36057638 ccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 283 - 429
Target Start/End: Original strand, 7267841 - 7267987
Alignment:
Q  283 aggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 382  Q
    ||||||||||||||||||||||||||||||||| |||||||| | || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  7267841 aggactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacg 7267940  T
Q  383 tccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||||    |||||||||| ||||  ||||||||| |||||||    
T  7267941 tccatcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 40782300 - 40782181
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  40782200 aatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 2852886 - 2853005
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 2852985  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  2852986 aatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 7269541 - 7269446
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269541 aaaaatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 21843081 - 21842962
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||| |||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 21842982  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  21842981 aatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 29620138 - 29620257
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||   | | |||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  29620238 aatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||  ||||| | | || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||| ||||||| ||||  || |||||| ||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 285 - 421
Target Start/End: Original strand, 8539675 - 8539811
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||| |  || ||||| | |||||||| ||||||||| | ||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    |||||||  |||| |||| || ||||  |||||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagt 8539811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 429
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||||||||||| ||||||||   || ||||||||||||||||  |||||||| | ||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||| ||||| |||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 404
Target Start/End: Complemental strand, 8541363 - 8541241
Alignment:
Q  282 aaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 381  Q
    |||||||||||||||||||||||| ||||||||| |||||||| | || |||||||||||||||| ||||||||| | ||||||| |||||||   | |     
T  8541363 aaggactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaat 8541264  T
Q  382 gtccatcaaatcagtccctccgt 404  Q
    ||| |||||||||||||||||||    
T  8541263 gtcaatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  287 ctaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  387 tcaaatcagtccctccgt 404  Q
    ||||||||||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 429
Target Start/End: Complemental strand, 30468405 - 30468260
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||| ||||||||| |||||||||||||||| |||||| |   || |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||    
T  30468405 ggactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgt 30468306  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  30468305 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 18625129 - 18624985
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| |   |||  | || ||||||||||||||||  |||||||| | |||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   |||| |||||| ||||  ||||||||||||||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 42471548 - 42471637
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471548 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 28813856 - 28813735
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattt--tgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 382  Q
    ||||||||||||||||||||||||||||||    |||||| | | || ||||||| |||||||| ||||||||| | |||||||||||||||   | | |    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatg 28813757  T
Q  383 tccatcaaatcagtccctccgt 404  Q
    |  |||||||||||||||||||    
T  28813756 taaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| |||||| |   || |||||||||||||||| ||||||  | | || |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  388 caaatcagtccctccgt 404  Q
    |||||||||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  341 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 392  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 34328916 - 34328797
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || ||||||| |||||||| | ||||| | | || |||| |||||||   | | |||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 34328817  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||| ||||||    
T  34328816 aatcaaatcagtcgctccgt 34328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 18728680 - 18728606
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  18728680 ttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 32087560 - 32087634
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||||| ||| ||||||||| ||||||| || || ||||||  ||||||||   ||||||| | |||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 376  Q
    |||||||||| ||| |||||| |||||||  | || ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 38596878 - 38596974
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||||||||||||||| |    ||| | || ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 35395379 - 35395453
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||   |||||||||||    
T  35395379 ttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtccctccgtc 35395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 43318134 - 43318064
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||   |||||||||||    
T  43318134 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 19997164 - 19997225
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 392  Q
    ||||||||  |||||||| ||||||||||||| | ||||||||| |||||| | ||||||||    
T  19997164 ttcgtccccaaatttttcaaaatatcaaattacttcctgaatttaacagacattcatcaaat 19997225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 372
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 372  Q
    ||||||||||| |||||||||||||||| |||||||  | || |||||||   ||||||  |||||||| | ||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 8e-59; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 9121792 - 9121645
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9121792 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 9121693  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9121692 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 47013206 - 47013059
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 46583680 - 46583533
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||  ||||||||||| |||| |||||||| | ||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 4856090 - 4855946
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||| | |||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || | |||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 283 - 404
Target Start/End: Complemental strand, 37346053 - 37345932
Alignment:
Q  283 aggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 382  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   | | |    
T  37346053 aggactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 37345954  T
Q  383 tccatcaaatcagtccctccgt 404  Q
    || |||||||||||||||||||    
T  37345953 tcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 46582010 - 46582129
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46582109  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  46582110 aatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||||| | |||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 8167942 - 8168061
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||| |   | | |||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtc 8168041  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  8168042 aatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 8169657 - 8169538
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||||| |||||||||    
T  8169557 aatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 6818802 - 6818658
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||  ||||||||| ||||  | ||||||| | |||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 25278492 - 25278348
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||| | | ||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 31238619 - 31238475
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||||||||||| |||||||| | || || ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   |||| || ||| ||||  ||||||||| |||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 9120039 - 9120158
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  9120139 aatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 27089368 - 27089249
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||||||| |||||||||||   | | |||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtc 27089269  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||||||||| |||||    
T  27089268 aatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 429
Target Start/End: Original strand, 37344339 - 37344486
Alignment:
Q  282 aaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 381  Q
    |||||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||| | | ||||||  ||||||||||| ||    
T  37344339 aaggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatac 37344438  T
Q  382 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  37344439 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 27087283 - 27087430
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||||||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 27087381  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||   | || |||||| ||||  ||||||||| ||||||||||    
T  27087382 ccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 51896276 - 51896129
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||| ||||||||||| ||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||| ||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgt 51896178  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  51896177 ccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 47011456 - 47011575
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||| |||||||||||||    
T  47011556 aatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 374
Target Start/End: Original strand, 4854409 - 4854499
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854409 ggactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 278 - 387
Target Start/End: Complemental strand, 25279084 - 25278975
Alignment:
Q  278 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 377  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||  | || ||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  25279084 taaaaatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttac 25278985  T
Q  378 agacgtccat 387  Q
    ||||||||||    
T  25278984 agacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 1444270 - 1444151
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||| ||||||||||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||   | | |||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtc 1444171  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  1444170 aatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 3013600 - 3013447
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||| ||| ||| | |||||| ||||| |||||||| ||||||||| | ||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaatt-cgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgt 3013502  T
Q  384 c------catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |      |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  3013501 ccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 428
Target Start/End: Complemental strand, 50556221 - 50556078
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||| |||||||||||| ||||||||| ||||||| | |||||| |||| ||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  50556221 gactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaatt-cgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgt 50556123  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 428  Q
    | ||||||   ||||||||||| ||||  ||||||||| ||||||    
T  50556122 ctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 1442599 - 1442668
Alignment:
Q  363 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 31236819 - 31236938
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||| |||||||||   | |  |    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatat 31236917  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||||||||||    
T  31236918 caatcaaatcagtccctccgt 31236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 33599229 - 33599335
Alignment:
Q  296 caaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcag 395  Q
    |||||||||||||||||||||||||||||   || ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  396 tccctcc 402  Q
    |||||||    
T  33599329 tccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 15104487 - 15104588
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 430  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| |||||| ||||  ||| ||||| ||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgat 15104586  T
Q  431 gt 432  Q
    ||    
T  15104587 gt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 52641888 - 52642007
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac-agacgt 383  Q
    ||||||||||||||||||||||||||||||| |||||||  | || |||||||||||||||| ||||||||  | ||||| ||| || ||||| | | ||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt-cctcaaatttacaaaatgt 52641986  T
Q  384 ccatcaaatcagtccctccgt 404  Q
     ||||||||||||||||||||    
T  52641987 tcatcaaatcagtccctccgt 52642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 2871165 - 2871046
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||| | | || |||  |||||||   | | |||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtc 2871066  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  2871065 aatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 52643736 - 52643648
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 376  Q
    ||||||||||||||||||||| |||||| |||||||    || |||||||||||||||| ||||||||  | |||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||| |||||||||||| |||||||| | || ||||| |||||||||| ||||||| | | || |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 400
Target Start/End: Original strand, 50554164 - 50554278
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||||||||||||||||||||||||| ||||||||   || ||||||||||||||||   ||||| | | ||||| |||||||||   | | |||     
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  386 atcaaatcagtccct 400  Q
    |||||||||||||||    
T  50554264 atcaaatcagtccct 50554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 3011858 - 3011974
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    ||||||||||||||||||||| |||||| ||||||| | |||| ||||| |||||||||| ||||||||| | |||||| ||||||||   | | ||| |    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaa-ttcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaa 3011956  T
Q  387 tcaaatcagtccctccgt 404  Q
    |||||||||||| |||||    
T  3011957 tcaaatcagtccatccgt 3011974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtc 365  Q
    |||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 33599187 - 33599248
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    ||||||||||||||||||||||||||||||||||||||||   || ||||||| ||||||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaatttt 33599248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 1442551 - 1442611
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    |||||||||||| | | |||||||||||||||||||||| | |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttt 1442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 6816866 - 6816926
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    |||||||||||||||||||||||||||||| ||||||||   || ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 6816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 51894570 - 51894686
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcga-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    |||||| |||||||||| |||||||||| |||||| |  ||||||| ||| ||||||||| ||||||||  | |||||||||||||||   | | ||| |    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaattt-gtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaa 51894668  T
Q  387 tcaaatcagtccctccgt 404  Q
    ||||||||||||||||||    
T  51894669 tcaaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 42134532 - 42134602
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  42134532 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 5783427 - 5783500
Alignment:
Q  348 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 23577636 - 23577725
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||| |||||||| ||||| |||  ||||||||||   ||||||| || | |||||| ||||||||||||||||||  |||||||    
T  23577636 gactaatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaattt 23577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 45044949 - 45044986
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaat 322  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaat 45044986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 36895588 - 36895528
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 27940654 - 27940727
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 404  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940654 ttcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 284 - 432
Target Start/End: Original strand, 43519423 - 43519571
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  43519423 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgt 43519522  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||| ||||||||||| |||| |||| ||| ||||||||||||    
T  43519523 ccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 4173830 - 4173710
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | ||||    
T  4173830 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgt 4173731  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | ||||| |||||||||||||    
T  4173730 caatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 286 - 432
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||||||||||||||| ||||||||| |||||||| | || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  386 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| |||||||| | || ||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   ||||||||||| ||||  | ||||||| ||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 33266100 - 33265980
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||| ||||||||||| ||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||   | | ||    
T  33266100 ggactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 33266001  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||||||||||    
T  33266000 caatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 319273 - 319392
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||| ||||||||||||    
T  319373 aatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 4169686 - 4169805
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||| |||||||||||||||||||||||||||   | | |||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 4169785  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||| ||||||||||||    
T  4169786 aatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 5437811 - 5437930
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  5437911 aatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| | ||||||||||||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| | ||||||||||| |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 833223 - 833342
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  833323 aatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 5439736 - 5439617
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  5439636 aatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 429
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||||||||||||||||| ||||||||   || ||| | | |||||||| ||||||||| | |||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 320989 - 320870
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | |||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||| |||||||||||||    
T  320889 aatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 432
Target Start/End: Original strand, 41781530 - 41781686
Alignment:
Q  276 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||| || ||||||||||||||||| || |||||||||| ||||||| | ||||||| ||||||||||||| | ||||||  | |||||||||||||||    
T  41781530 tataataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcaaaatatttatttagtccctgaattt 41781628  T
Q  375 tacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||| |||||||||   ||||||||||| ||||  |||||||||  |||||||||    
T  41781629 tacagacatccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||  |||||||| | ||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 284 - 432
Target Start/End: Original strand, 48813786 - 48813934
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 382  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||||  |||||||||||| | ||||||  | ||||| ||||||||||| |||||    
T  48813786 ggactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattt-atccctgaattttgcaaaatatatatttagttcctgaattttatagacg 48813884  T
Q  383 tccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||   |||||| |||| ||||  || ||| || ||||||||||    
T  48813885 tccatcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||| |||| | |||||||||| |||||||| | || ||||||| | |||||| ||||||||  | ||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    || ||||   |||| |||||| ||||  ||||||||| |||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 49524822 - 49524703
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||||||||| |||||    
T  49524722 aatcaaatcagtccttccgt 49524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 39345574 - 39345683
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    ||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| |||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  395 gtccctccgt 404  Q
    ||| ||||||    
T  39345674 gtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| ||||||||| ||| |||| | || ||||| | |||||||| ||||||||| | ||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 42980629 - 42980782
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgac-------aaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 377  Q
    ||||||||| ||||||  ||||||||||||| ||||| ||||       |||||| |||| |||||||| |||||| || | ||||||||| ||||||||    
T  42980629 gactaatacttcaaatgtgtccttgaatttttaaaaaacgaccaaggccaaattt-gtccatgaattttacgaaatttctatttagtcccttaattttac 42980727  T
Q  378 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42980728 agacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  290 atacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||||| || ||||||||||||||||||    ||||||||   |||||||| |||||||||||||||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 48645255 - 48645374
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||| ||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||    
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaa-ttcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgt 48645353  T
Q  384 ccatcaaatcagtccctccgt 404  Q
     |||||||||||| |||||||    
T  48645354 tcatcaaatcagtacctccgt 48645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 11601674 - 11601786
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    |||||||| |||||||| |||||||||| ||||||| | |||||||  ||||  |||||| | |||||| | ||||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaattta-tccccaaattttgcaaaatat-atattagtccctgaattttacagacgtcca 11601771  T
Q  387 tcaaatcagtccctc 401  Q
    |||||  ||||||||    
T  11601772 tcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 432
Target Start/End: Complemental strand, 48646852 - 48646724
Alignment:
Q  304 tccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccg 403  Q
    |||||||||||| |||| ||  | || ||||||| |||||||  ||||||||| | |||||||||||||||||||||| | |||||||   |||| ||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  404 tctaaaatgtccgttagtagtgatgatgt 432  Q
    || ||||  | ||||||| ||||||||||    
T  48646752 tccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 39083685 - 39083775
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39083685 ttcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 404
Target Start/End: Original strand, 11254113 - 11254238
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||| | || | |||| || |||||| ||||||| |   || |||| |||||||   |    
T  11254113 aaaaatgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaa 11254212  T
Q  379 gacgtccatcaaatcagtccctccgt 404  Q
     | ||| |||||||||||||||||||    
T  11254213 aatgtcaatcaaatcagtccctccgt 11254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 5484586 - 5484676
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5484586 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 39921540 - 39921630
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39921540 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 43779945 - 43779855
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  43779945 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 44794838 - 44794765
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 404  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794838 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 419
Target Start/End: Original strand, 39189428 - 39189516
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 419  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189428 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 44558567 - 44558511
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558567 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 396
Target Start/End: Original strand, 20819986 - 20820096
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||| |||||||||||||||| ||||||| | |||||||  | ||| |||||| | ||||||  | ||||||||||||||||  | | |||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaattt-attcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtc 20820084  T
Q  385 catcaaatcagt 396  Q
     |||||||||||    
T  20820085 aatcaaatcagt 20820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  348 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 397
Target Start/End: Original strand, 2691368 - 2691485
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    |||||||| ||||||||||| ||| || ||||||||| |||||||  | || |||||||   |||||| | ||||||| | ||||||||||||||||  |    
T  2691368 aaaaaggaataatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaa 2691466  T
Q  379 gacgtccatcaaatcagtc 397  Q
     | ||| ||||||||||||    
T  2691467 aatgtcaatcaaatcagtc 2691485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 32652145 - 32652235
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  32652145 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 35996109 - 35996183
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   |||||||||||    
T  35996109 ttcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtc 35996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 44994365 - 44994275
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||||    
T  44994365 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 47941857 - 47941930
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 404  Q
    |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941857 ttcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  349 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 13451058 - 13450998
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaa 13450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 112; Significance: 2e-56; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 3294 - 3441
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 4466 - 4613
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 284 - 432
Target Start/End: Complemental strand, 32456016 - 32455868
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  32456016 ggactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgt 32455917  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||    
T  32455916 ccatcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 303 - 430
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  303 gtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 402  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  403 gtctaaaatgtccgttagtagtgatgat 430  Q
    ||| ||||| ||||||| ||||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 13613706 - 13613559
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||| ||||||||||||||||||||||||||||   || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||| |||||||||||| |||| |||| ||||| ||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 32518586 - 32518467
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | |||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 32518487  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  32518486 aatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 32439215 - 32439071
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||| ||||||||| ||||||||   || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 3480746 - 3480627
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||   | | |||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  3480646 aatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 32454248 - 32454367
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  32454348 aatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 432
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||| |||||||| |||| ||||||| ||||||||   || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  386 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 18645192 - 18645074
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||| ||||||||||||||||||| |||||||   | | ||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcggacaa--ttcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgt 18645095  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||||||||||    
T  18645094 caatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 289 - 432
Target Start/End: Original strand, 10568403 - 10568546
Alignment:
Q  289 aatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||| ||||||||||||||||||||| ||||||| | |||||| ||||| |||||||  ||||||||  | ||||||||||||||||||||||||| ||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaatt-cgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctat 10568501  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  10568502 caaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 429
Target Start/End: Original strand, 32516877 - 32517021
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| | ||||| | | |||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 432
Target Start/End: Complemental strand, 7373079 - 7372935
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||  ||||||||| |||||| |   || |||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   ||||||||||| ||||  ||| ||||| ||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 13610690 - 13610808
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcga-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| | |||||   | | ||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaattt-gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgt 13610787  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||||||||||    
T  13610788 caatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 429
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||||||||||||||||||||||||| ||||||||   || |||||| |||||||||  |||||||| | | | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  386 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    | ||||   ||||||||||| ||||  |||| |||| |||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 6899485 - 6899632
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||| ||||||||||||| ||||||| | |||||| |||| || ||||||  |||||||| | ||||||||| |||||||||||| |    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaatt-cgtctctaaattttgtgaaatatctatttagtccctaaattttacagacat 6899583  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||   |||||| |||| ||||  |||||||||  |||||||||    
T  6899584 ccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 405
Target Start/End: Complemental strand, 10570008 - 10569888
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||  | || ||||||| |||||||| | ||||||| | |||||||  ||||||   | | |||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtc 10569909  T
Q  385 catcaaatcagtccctccgtc 405  Q
    |||||||||||||||||||||    
T  10569908 catcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||||||||||||||||||||||||||| | |||| ||| ||| |||||||| ||||||||| |||||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaa-ttcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 404
Target Start/End: Complemental strand, 11357289 - 11357164
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||   || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  11357289 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 11357190  T
Q  379 gacgtccatcaaatcagtccctccgt 404  Q
     | |||  ||||||||||||||||||    
T  11357189 aatgtcattcaaatcagtccctccgt 11357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaat 353  Q
    ||||||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 9398713 - 9398807
Alignment:
Q  338 ctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 6902996 - 6902868
Alignment:
Q  273 tattataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaa 371  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||| |||||| || |||||| | |||||||  |||    
T  6902996 tattataaaa--gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaa-ttcgtccctaaattttgcg-aatatctatttagtcctcgaa 6902901  T
Q  372 ttttacagacgtccatcaaatcagtccctccgt 404  Q
    |||   | | |||||||||||||||||||||||    
T  6902900 tttacaaaatgtccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaata 354  Q
    |||||||||||||| |||||||||||||||| |||||||| | || || ||||||||||||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 7049828 - 7049904
Alignment:
Q  356 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||| || ||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 404
Target Start/End: Complemental strand, 20525432 - 20525304
Alignment:
Q  276 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 375  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||| |   || ||| |||||||||||| | ||||| | | || |||| |||||||     
T  20525432 tataaaaacgactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattta 20525333  T
Q  376 acagacgtccatcaaatcagtccctccgt 404  Q
      | | ||| |||||||||||||||||||    
T  20525332 caaaatgtcaatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 8605414 - 8605353
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    ||||||||||||||||||||||||||||||| |||||||  | || ||||||||| ||||||    
T  8605414 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaatttt 8605353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 3018510 - 3018450
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018510 ttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 14338584 - 14338480
Alignment:
Q  300 ttcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccc 399  Q
    |||||||||||||||| |||||||  | || |||||||   |||||| |||||| || ||||  ||||||||||| ||||||||||||||||   |||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  400 tccgt 404  Q
    |||||    
T  14338484 tccgt 14338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 17952120 - 17952030
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  17952120 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    |||||||||||||||||||||||||||| || |||| | |||| |||||||   |||||| ||||||||| | |||||||  ||||||   | | ||| |    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaa-ttcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaa 21068726  T
Q  387 tcaaatcagtccctccgt 404  Q
    ||||||||||||||||||    
T  21068727 tcaaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 323
Target Start/End: Original strand, 21091109 - 21091144
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc 323  Q
    |||||||||||||||||||||||||||| |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  289 aatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    |||| ||||||||| |||||||||||| |||||||  | || ||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 7e-53; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 279 - 432
Target Start/End: Complemental strand, 3152368 - 3152215
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3152368 aaaaacgactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttaca 3152269  T
Q  379 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  3152268 gacgtccatcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 291 - 432
Target Start/End: Original strand, 2660218 - 2660359
Alignment:
Q  291 tacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaa 390  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  391 atcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||  ||||||||||| |||| ||| |||| ||  ||||||||    
T  2660318 attcgtccctccgtccaaaaggtctgttaataacgatgatgt 2660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 44794208 - 44794354
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 328 - 432
Target Start/End: Complemental strand, 19987695 - 19987591
Alignment:
Q  328 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgat 427  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgat 19987596  T
Q  428 gatgt 432  Q
    |||||    
T  19987595 gatgt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 27899225 - 27899081
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||| |||   ||||||||||| ||||  ||||||||| |||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 38193599 - 38193480
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38193500  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||||||||| |||||    
T  38193499 aatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 53094362 - 53094243
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  53094262 aatcaaatgagtccctccgt 53094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 284 - 374
Target Start/End: Complemental strand, 41979442 - 41979352
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979442 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 402
Target Start/End: Original strand, 3150252 - 3150369
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 3150351  T
Q  385 catcaaatcagtccctcc 402  Q
     |||||||||||||||||    
T  3150352 aatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 410
Target Start/End: Original strand, 41977750 - 41977875
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || | |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  385 catcaaatcagtccctccgtctaaaa 410  Q
    | |||||   ||||||||||| ||||    
T  41977850 cgtcaaaatggtccctccgtccaaaa 41977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||    |||||||||| ||||  || |||||| |||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 21348723 - 21348870
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||||||||||| |||||||| | || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||||||| ||||  || |||||| ||||| ||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||| ||||||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 2661992 - 2661880
Alignment:
Q  290 atacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatca 389  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| ||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  390 aatcagtccctcc 402  Q
    |||||||||||||    
T  2661892 aatcagtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 285 - 421
Target Start/End: Original strand, 54898437 - 54898573
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    |||||||   ||| ||||||| ||||  |||||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagt 54898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 46310525 - 46310406
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46310426  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||| ||||||||||||    
T  46310425 aatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 51684610 - 51684757
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||||||||||||||||| |||||||  | || ||| |||||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 285 - 374
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 284 - 432
Target Start/End: Complemental strand, 30600063 - 30599915
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||| |||||| | |||||| | || || ||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  30600063 ggactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgt 30599964  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    | ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  30599963 cgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||| |||||||||||| |||||| | | || ||| || ||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||| ||| |||||  |||||||| ||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||| || ||||||||| ||||||||  | || |||| || |||||||| ||||||||| | ||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 400
Target Start/End: Original strand, 46609149 - 46609264
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||   | | |||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  385 catcaaatcagtccct 400  Q
     |||||||||||||||    
T  46609249 aatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| || ||||||||||||| | | ||||||||||||||||||| ||||||||||||||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 432
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  287 ctaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    ||||||||||||||||||||||||||||| ||||||||   || ||||| || ||||||| ||||||||| | |||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  387 tcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||   |||||||| || ||||  ||||||||| ||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 28626411 - 28626530
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||||||||||||||||||||||   ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  28626511 aatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 35903819 - 35903914
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||  | |||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903819 aaaaacgactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 429
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||  ||||||||| |||||| ||| || |||||||||||||||| | ||| ||  | |||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||   || |||||||||||||  ||||||||| |||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 7883328 - 7883447
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||| |||||| |||||||||||||||||| | |||||||||||| ||||||  |||||||||||||||| |||||||||   | |  ||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  7883428 aatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 23291570 - 23291689
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||| ||||||||||||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||| ||||||||   | | |||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtc 23291669  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  23291670 aatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 429
Target Start/End: Complemental strand, 35905843 - 35905712
Alignment:
Q  298 aattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 397  Q
    ||||| |||||||||||| ||||||||   || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   |||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  398 cctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||| ||||  |||| |||| |||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 46112487 - 46112606
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||| | || |||||   |||||||| | ||||||| | ||||||| |||||||||||||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  385 catcaaatcagtccctccgt 404  Q
    |||||||   ||||||||||    
T  46112587 catcaaaatggtccctccgt 46112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 432
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||| ||||||||| |||||||  |  | |||||| | ||||||| | ||||||| | ||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 611311 - 611192
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| |||||||  | || |||||||||||||||||||||||| | | |||| ||||||||||   | | |||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtc 611212  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  611211 aatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 404
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  286 actaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 385  Q
    |||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| | ||||| | | ||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  386 atcaaatcagtccctccgt 404  Q
    |||||||||||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 404
Target Start/End: Original strand, 44267976 - 44268100
Alignment:
Q  280 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 379  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| | || ||| || ||||||||| ||||||| | | || |||| |||||||   |     
T  44267976 aaaatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaa 44268075  T
Q  380 acgtccatcaaatcagtccctccgt 404  Q
    | ||| |||||||||||||||||||    
T  44268076 atgtcaatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    ||||||||||||||||||||| |  | ||| | || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  |    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  395 gtccctc 401  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 30598337 - 30598456
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||| ||||||| | | || |||| |||||||   | | ||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattt-gtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 30598435  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | ||||||| |||||||||||    
T  30598436 caatcaaattagtccctccgt 30598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttt 346  Q
    ||||||||||||||||||||||||||||||| |||||||| | || | ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 404
Target Start/End: Complemental strand, 42282559 - 42282443
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 386  Q
    |||||||||||||||||||||||||||| ||||||| | |||| |||||  ||||||||| ||||||||| | ||||||| |||||||   | | || ||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaa-ttcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttca 42282461  T
Q  387 tcaaatcagtccctccgt 404  Q
    | ||||||||||||||||    
T  42282460 ttaaatcagtccctccgt 42282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 51686483 - 51686367
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||| |||||| |||||||  | || ||||||||| |||||| ||||||||  | |||||||  ||||||   | | ||     
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  385 catcaaatcagtccctc 401  Q
    |||||||||||||||||    
T  51686383 catcaaatcagtccctc 51686367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  363 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 45898462 - 45898352
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    |||||||||||| |||||||| | |  ||||| || || ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  395 gtccctccgtc 405  Q
    |||||||||||    
T  45898362 gtccctccgtc 45898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 48829355 - 48829472
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 382  Q
    |||||||||||||||||||||||||||||||| |||| || | |||||||  | |||||||||| ||||||||| | |||||||  | ||||   | | |    
T  48829355 ggactaatacctcaaattcgtccttgaattttcaaaattcagccaaattt-attcctgaattttgcgaaatatctatttagtcctcggatttacaaaatg 48829453  T
Q  383 tccatcaaatcagtccctc 401  Q
    |||||||||||||||||||    
T  48829454 tccatcaaatcagtccctc 48829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 46197766 - 46197867
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 430  Q
    |||||| ||||||||| | ||||||| | ||||| |||||||||||||||||||||| |||   |||||| |||| ||||  |||||||||  |||||||    
T  46197766 ttcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgat 46197865  T
Q  431 gt 432  Q
    ||    
T  46197866 gt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtc 365  Q
    |||||||||||||||||| |||||||||||| |||||||||| || || || | |||||||| | ||||||| | ||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 405
Target Start/End: Complemental strand, 25535317 - 25535253
Alignment:
Q  341 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 405
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  343 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 23888886 - 23888776
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    |||||||||||| |||||||| | |  ||| | || ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||       
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  395 gtccctccgtc 405  Q
    |||||||||||    
T  23888786 gtccctccgtc 23888776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 40509025 - 40508915
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    ||||||||||||||||||||| |    ||| | || ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||       
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  395 gtccctccgtc 405  Q
    |||||||||||    
T  40508925 gtccctccgtc 40508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 405
Target Start/End: Original strand, 48633923 - 48633997
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  48633923 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 48633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 402
Target Start/End: Complemental strand, 54412633 - 54412519
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||| ||||||||||||| |||||||| |||||| |   || ||||||| |||||||| ||| ||||| | ||||| |||||||||   | | ||| ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  388 caaatcagtccctcc 402  Q
    |||||||||||||||    
T  54412533 caaatcagtccctcc 54412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 432
Target Start/End: Complemental strand, 48830896 - 48830803
Alignment:
Q  339 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||  ||||||||| | ||||||  |||||||||| |||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 2977443 - 2977347
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||||||||||||||||||| |  ||||| | || ||| ||||| |||| | ||||||||||| | ||||||| |||||  || ||||||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaa 2977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 44276265 - 44276193
Alignment:
Q  360 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||| ||||||||||||||| ||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 21350694 - 21350575
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||| ||| ||| ||||  ||||||| | || |||||  ||||||||| ||||||| | | || |||| |||||||   | | |||    
T  21350694 gactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 21350595  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  21350594 aatcaaatcagtccctccgt 21350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 46114195 - 46114075
Alignment:
Q  285 gactaatacctcaaattcgtccttgaatttt-gaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||| |||||||||||  ||||||||||||  |||||||| | || || |||| |||||||| ||||||||| | ||||||  |||||||   | | ||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgt 46114096  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||| ||||||    
T  46114095 caatcaaatcagtcactccgt 46114075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 6786125 - 6785978
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgt 6785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 37020508 - 37020655
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||||||||||||||||||||||   ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 285 - 410
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| |  ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  385 catcaaatcagtccctccgtctaaaa 410  Q
    ||||||||||||||||||||| ||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 279 - 432
Target Start/End: Complemental strand, 39664898 - 39664745
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| | || |||||||| ||||||| ||||||||| | |||||||||||||||||||    
T  39664898 aaaaatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttaca 39664799  T
Q  379 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  39664798 gacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 285 - 421
Target Start/End: Original strand, 16763076 - 16763212
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    |||||||   ||||||||||| ||||| || ||||||    
T  16763176 catcaaaatggtccctccgtccaaaatctctgttagt 16763212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 280 - 404
Target Start/End: Original strand, 24205593 - 24205717
Alignment:
Q  280 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 379  Q
    |||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   |     
T  24205593 aaaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaa 24205692  T
Q  380 acgtccatcaaatcagtccctccgt 404  Q
    | ||| ||||||| |||||||||||    
T  24205693 atgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 14387349 - 14387468
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 14387448  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  14387449 aatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 37022274 - 37022155
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  37022174 aatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 40560223 - 40560370
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||| ||||||||||| ||||||||| |||||||  | || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 14389228 - 14389081
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| ||||||||| |||||||| | || |||||||||||||||| ||||||||| | |||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||||||||||| ||||  | ||||||||||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 16764700 - 16764581
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||| ||||||||||||    
T  16764600 aatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 279 - 404
Target Start/End: Complemental strand, 2577575 - 2577450
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||   |    
T  2577575 aaaaatgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaa 2577476  T
Q  379 gacgtccatcaaatcagtccctccgt 404  Q
     | ||| ||||||| |||||||||||    
T  2577475 aatgtcaatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 285 - 430
Target Start/End: Complemental strand, 44709889 - 44709744
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||||||||||||| ||||| || | || |||| ||||||||||| ||||||| | | |||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 430  Q
    |||||||   ||||||||||| ||||  | ||||||| ||||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 285 - 429
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaa-tcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    ||||||||||||||||||||||||||||||| ||||| ||| | || || ||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  384 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    || |||||   ||||||||||| ||||  ||||||||| |||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 280 - 432
Target Start/End: Original strand, 2766929 - 2767081
Alignment:
Q  280 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 379  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||   ||  |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  2766929 aaaatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacag 2767028  T
Q  380 acgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||| ||||||   ||||||| ||| ||||  ||||||||| ||||||||||    
T  2767029 acgtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 432
Target Start/End: Original strand, 17696209 - 17696353
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||||||||||||||||||||||| |||||||| | || ||| ||||||||||||   ||||||| | ||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 289 - 432
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  289 aatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||||||||||||||||||||||||| |||||| ||  || || |||| ||||||||| | ||||||| | ||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    ||||   |||||||| || ||||  ||||||||| ||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||  |||||| |||||||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 374  Q
    ||||||||||||||| | ||||||||||||| ||||||||   ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 39663153 - 39663273
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||| ||||||||||||||||||| ||||||||   || |||||||||||||||| | ||||| | | |||||||||||||||   | | ||    
T  39663153 ggactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgt 39663252  T
Q  384 ccatcaaatcagtccctccgt 404  Q
    | |||||||||||||||||||    
T  39663253 caatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 16376736 - 16376855
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||||||||| ||||||||| ||||||||   || |||||||||||||||| ||||||| | | |||||||||||||||   | |  ||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  385 catcaaatcagtccctccgt 404  Q
     |||||||||||||||||||    
T  16376836 aatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 19581414 - 19581526
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||||||||||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | |||||||  ||||||  || | ||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaattt-gtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgt 19581512  T
Q  384 ccatcaaatcagtc 397  Q
    ||||||||||||||    
T  19581513 ccatcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 404
Target Start/End: Original strand, 19906685 - 19906801
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    |||||||| ||||||||||||||||||| ||||||||   || |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  388 caaatcagtccctccgt 404  Q
    |||||||||||||||||    
T  19906785 caaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 6797506 - 6797613
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 383  Q
    |||||||||||| |||||| |  ||||||||| |||||| | | || ||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  6797506 ggactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgt 6797605  T
Q  384 ccatcaaa 391  Q
    | ||||||    
T  6797606 ctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 432
Target Start/End: Original strand, 39455169 - 39455316
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    |||||||| |||||||| ||||||||||||| ||||||||   || |||   |||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  385 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 432  Q
    |||||||   ||| ||||||  ||||  ||||||||| | ||||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 429
Target Start/End: Complemental strand, 16377292 - 16377197
Alignment:
Q  334 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||||||||||| | ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  16377292 gtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 34400313 - 34400383
Alignment:
Q  284 ggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaata 354  Q
    ||||||||||||||||||| |||||||||||| |||||||| | || ||| |||||||||||| |||||||    
T  34400313 ggactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaata 34400383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 421
Target Start/End: Complemental strand, 11023091 - 11023001
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 421  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||||    
T  11023091 ttcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 404
Target Start/End: Complemental strand, 39456875 - 39456750
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||| |   || ||||||| |||||||| | ||||| | | |||||||||||||||   |    
T  39456875 aaaaacgactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataa 39456776  T
Q  379 gacgtccatcaaatcagtccctccgt 404  Q
     | ||| ||||||||||||| |||||    
T  39456775 aatgtcaatcaaatcagtccatccgt 39456750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 42517558 - 42517597
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcg 324  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcg 42517597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 405
Target Start/End: Complemental strand, 26584895 - 26584821
Alignment:
Q  331 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 37417323 - 37417379
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417323 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 4046352 - 4046403
Alignment:
Q  341 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 392  Q
    ||||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046352 aattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 6799494 - 6799436
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatc-gacaaatttcgtccctgaatttt 346  Q
    ||||| |||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaa-ttcgtccatgaatttt 6799436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 405
Target Start/End: Complemental strand, 29909735 - 29909664
Alignment:
Q  334 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 405  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 11315449 - 11315339
Alignment:
Q  295 tcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 394  Q
    |||| ||||||||| |||||| |  ||||| | || ||||| ||  |||||  |||||||||||| |||| |||||||||  |||||||||||||||       
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  395 gtccctccgtc 405  Q
    |||||||||||    
T  11315349 gtccctccgtc 11315339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 15432378 - 15432434
Alignment:
Q  335 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 391  Q
    ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432378 tccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 982 - 1101
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  1082 aatcaaattagtccctccgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 54347 - 54228
Alignment:
Q  285 gactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 384  Q
    ||||||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  385 catcaaatcagtccctccgt 404  Q
     ||||||| |||||||||||    
T  54247 aatcaaattagtccctccgt 54228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 288 - 429
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  288 taatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 387  Q
    ||||||||||||| |||||||||||||| |||||| |   || ||||||| ||||||||  |||||||| | ||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  388 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 429  Q
    ||||   ||||||||||| ||||  ||||||||| |||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 404
Target Start/End: Complemental strand, 1650 - 1525
Alignment:
Q  279 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 378  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||   || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  1650 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 1551  T
Q  379 gacgtccatcaaatcagtccctccgt 404  Q
     | |||  ||||||||||||||||||    
T  1550 aatgtcattcaaatcagtccctccgt 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 8264 - 8353
Alignment:
Q  287 ctaatacctcaaattcgtccttgaattttgaaaaatcgacaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 376  Q
    ||||||||||||||||||||||||||||| |||||| | | || ||||| | |||||||| | ||||||| | |||||||||||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttta 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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