View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1607_low_2 (Length: 449)

Name: NF1607_low_2
Description: NF1607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1607_low_2
NF1607_low_2
[»] chr7 (69 HSPs)
chr7 (18-139)||(11595796-11595917)
chr7 (18-130)||(45055752-45055864)
chr7 (18-139)||(40480050-40480172)
chr7 (17-139)||(7447899-7448021)
chr7 (17-140)||(20401019-20401142)
chr7 (18-139)||(33935532-33935653)
chr7 (21-139)||(49034224-49034342)
chr7 (17-140)||(45176268-45176391)
chr7 (17-139)||(5776130-5776252)
chr7 (18-144)||(26719839-26719965)
chr7 (17-139)||(28949758-28949880)
chr7 (155-221)||(37085528-37085594)
chr7 (17-139)||(37334301-37334423)
chr7 (18-139)||(44421901-44422023)
chr7 (17-142)||(5794933-5795058)
chr7 (148-221)||(22760887-22760960)
chr7 (18-139)||(33898944-33899065)
chr7 (17-138)||(36927022-36927143)
chr7 (17-141)||(665845-665969)
chr7 (21-141)||(3942203-3942323)
chr7 (18-78)||(48634471-48634531)
chr7 (17-135)||(3930720-3930838)
chr7 (18-128)||(10618945-10619055)
chr7 (145-199)||(29196926-29196980)
chr7 (38-139)||(21760583-21760684)
chr7 (18-139)||(22075087-22075208)
chr7 (18-79)||(36472463-36472524)
chr7 (148-229)||(36877185-36877266)
chr7 (38-138)||(18249994-18250094)
chr7 (17-141)||(42072106-42072230)
chr7 (18-140)||(33124719-33124841)
chr7 (21-139)||(37106853-37106971)
chr7 (148-202)||(41519262-41519316)
chr7 (17-139)||(43052895-43053017)
chr7 (18-139)||(222226-222347)
chr7 (148-197)||(7801204-7801253)
chr7 (148-217)||(23552142-23552211)
chr7 (18-139)||(32356985-32357106)
chr7 (155-204)||(43590938-43590987)
chr7 (148-216)||(13106766-13106833)
chr7 (166-210)||(14058295-14058339)
chr7 (166-210)||(14368323-14368367)
chr7 (21-139)||(17608739-17608854)
chr7 (148-216)||(18056759-18056827)
chr7 (17-77)||(26216295-26216355)
chr7 (166-206)||(29916802-29916842)
chr7 (17-77)||(48505850-48505910)
chr7 (35-130)||(388987-389082)
chr7 (155-202)||(15137584-15137631)
chr7 (155-202)||(17041010-17041057)
chr7 (159-202)||(18363731-18363774)
chr7 (155-202)||(20335829-20335876)
chr7 (163-202)||(26459408-26459447)
chr7 (33-136)||(33140805-33140908)
chr7 (38-141)||(35543554-35543657)
chr7 (18-76)||(23227062-23227120)
chr7 (18-76)||(23236215-23236273)
chr7 (17-79)||(23237577-23237639)
chr7 (62-136)||(33019369-33019443)
chr7 (18-76)||(33171597-33171655)
chr7 (21-139)||(37401566-37401684)
chr7 (48-138)||(41449794-41449884)
chr7 (22-139)||(10096499-10096616)
chr7 (18-139)||(17025361-17025482)
chr7 (163-204)||(42711997-42712038)
chr7 (165-202)||(43215225-43215262)
chr7 (145-209)||(7499915-7499979)
chr7 (165-216)||(25132363-25132413)
chr7 (18-78)||(46573673-46573733)
[»] chr5 (38 HSPs)
chr5 (18-139)||(41783344-41783465)
chr5 (18-140)||(26218066-26218188)
chr5 (18-142)||(14500703-14500827)
chr5 (18-112)||(11136034-11136127)
chr5 (17-140)||(3801363-3801486)
chr5 (63-139)||(4983327-4983402)
chr5 (17-140)||(38522860-38522983)
chr5 (21-141)||(20188995-20189115)
chr5 (21-139)||(32945021-32945139)
chr5 (18-139)||(31021882-31022003)
chr5 (17-140)||(31620886-31621009)
chr5 (17-139)||(27906116-27906238)
chr5 (38-139)||(5382825-5382926)
chr5 (19-140)||(27196097-27196218)
chr5 (21-139)||(1840687-1840805)
chr5 (17-135)||(18880210-18880328)
chr5 (141-202)||(25979187-25979248)
chr5 (18-78)||(19282175-19282235)
chr5 (33-140)||(15933197-15933304)
chr5 (22-73)||(20190650-20190701)
chr5 (155-205)||(84855-84905)
chr5 (53-139)||(10327984-10328070)
chr5 (148-202)||(26078049-26078103)
chr5 (17-139)||(29328062-29328183)
chr5 (148-202)||(43442220-43442274)
chr5 (21-113)||(2676038-2676130)
chr5 (162-202)||(25627095-25627135)
chr5 (174-206)||(37229051-37229083)
chr5 (163-202)||(14285200-14285239)
chr5 (148-202)||(16773831-16773885)
chr5 (143-189)||(28205833-28205879)
chr5 (149-202)||(12877718-12877771)
chr5 (148-217)||(14495788-14495857)
chr5 (155-200)||(17028264-17028309)
chr5 (163-216)||(39327074-39327127)
chr5 (145-217)||(9842829-9842901)
chr5 (18-86)||(10494004-10494072)
chr5 (177-217)||(29982020-29982060)
[»] chr1 (71 HSPs)
chr1 (18-132)||(19508547-19508661)
chr1 (17-139)||(43087466-43087588)
chr1 (18-140)||(13645179-13645301)
chr1 (141-274)||(27223056-27223189)
chr1 (21-141)||(35810740-35810860)
chr1 (17-141)||(47602860-47602984)
chr1 (19-138)||(45653433-45653551)
chr1 (21-139)||(25124885-25125003)
chr1 (18-139)||(50447360-50447481)
chr1 (36-140)||(12224574-12224678)
chr1 (370-433)||(27222991-27223055)
chr1 (17-140)||(24469816-24469939)
chr1 (18-141)||(45581006-45581129)
chr1 (18-140)||(15306512-15306634)
chr1 (18-144)||(44596536-44596662)
chr1 (19-139)||(21680656-21680776)
chr1 (18-142)||(31869613-31869737)
chr1 (17-140)||(7702853-7702976)
chr1 (21-148)||(14578577-14578703)
chr1 (18-139)||(7016075-7016196)
chr1 (38-142)||(29677516-29677620)
chr1 (18-141)||(39802765-39802888)
chr1 (22-141)||(42916112-42916231)
chr1 (142-216)||(9964456-9964530)
chr1 (18-140)||(15257170-15257292)
chr1 (21-139)||(23916832-23916950)
chr1 (17-139)||(32179876-32179998)
chr1 (53-134)||(31816622-31816703)
chr1 (22-130)||(7596416-7596524)
chr1 (23-139)||(15014339-15014455)
chr1 (18-86)||(27076568-27076636)
chr1 (17-77)||(37441248-37441308)
chr1 (154-202)||(40810497-40810545)
chr1 (21-141)||(42937096-42937216)
chr1 (21-89)||(48575130-48575198)
chr1 (155-202)||(15786318-15786365)
chr1 (148-202)||(3265948-3266002)
chr1 (41-139)||(7841665-7841762)
chr1 (21-75)||(14770580-14770634)
chr1 (21-79)||(15662971-15663029)
chr1 (143-217)||(27567105-27567179)
chr1 (17-139)||(36419119-36419241)
chr1 (155-200)||(6122825-6122870)
chr1 (145-202)||(12587291-12587348)
chr1 (54-135)||(14796643-14796724)
chr1 (54-135)||(14805517-14805598)
chr1 (18-139)||(28006369-28006490)
chr1 (22-79)||(46265004-46265061)
chr1 (18-78)||(5204530-5204590)
chr1 (142-202)||(18037611-18037671)
chr1 (18-78)||(23915658-23915718)
chr1 (162-206)||(38947466-38947510)
chr1 (142-202)||(51814512-51814572)
chr1 (163-202)||(2799901-2799940)
chr1 (155-202)||(8177180-8177227)
chr1 (166-205)||(19528322-19528361)
chr1 (163-202)||(33700771-33700810)
chr1 (163-229)||(952550-952616)
chr1 (165-203)||(4825012-4825050)
chr1 (148-202)||(8904438-8904492)
chr1 (33-139)||(47983289-47983395)
chr1 (145-202)||(12259281-12259338)
chr1 (17-130)||(20347684-20347797)
chr1 (17-86)||(20349164-20349233)
chr1 (155-204)||(52116777-52116826)
chr1 (142-202)||(4280449-4280509)
chr1 (148-204)||(16169974-16170030)
chr1 (18-86)||(40159683-40159751)
chr1 (165-205)||(43446004-43446044)
chr1 (165-205)||(45266875-45266915)
chr1 (165-205)||(52029932-52029972)
[»] chr6 (25 HSPs)
chr6 (18-136)||(33110477-33110595)
chr6 (18-140)||(22295935-22296057)
chr6 (21-140)||(5640251-5640370)
chr6 (17-141)||(3081716-3081840)
chr6 (145-221)||(12633030-12633106)
chr6 (19-130)||(9463363-9463474)
chr6 (18-139)||(1501867-1501988)
chr6 (21-139)||(10961796-10961914)
chr6 (18-139)||(4441301-4441422)
chr6 (17-77)||(10346739-10346799)
chr6 (18-139)||(13312041-13312164)
chr6 (53-139)||(11460014-11460100)
chr6 (21-139)||(17441180-17441298)
chr6 (18-79)||(18095538-18095599)
chr6 (18-86)||(6999286-6999354)
chr6 (21-73)||(9950826-9950878)
chr6 (163-202)||(11306172-11306211)
chr6 (154-217)||(14446225-14446288)
chr6 (18-133)||(18099835-18099950)
chr6 (163-201)||(30127439-30127477)
chr6 (163-229)||(33549143-33549209)
chr6 (18-139)||(7437323-7437444)
chr6 (165-206)||(10338168-10338209)
chr6 (148-217)||(24641173-24641242)
chr6 (148-216)||(6385886-6385954)
[»] chr4 (71 HSPs)
chr4 (18-139)||(52706236-52706357)
chr4 (18-138)||(7505548-7505668)
chr4 (18-139)||(22721347-22721467)
chr4 (18-140)||(15697082-15697204)
chr4 (18-139)||(11055226-11055347)
chr4 (18-130)||(51995097-51995209)
chr4 (20-139)||(9469798-9469917)
chr4 (17-139)||(36543799-36543921)
chr4 (18-139)||(22184522-22184643)
chr4 (21-133)||(36156300-36156412)
chr4 (17-140)||(48731172-48731295)
chr4 (21-139)||(80519-80637)
chr4 (21-139)||(55891985-55892103)
chr4 (17-139)||(56224163-56224285)
chr4 (21-142)||(51407946-51408067)
chr4 (24-140)||(13761824-13761940)
chr4 (49-141)||(28265671-28265763)
chr4 (39-139)||(49405635-49405735)
chr4 (17-139)||(12789552-12789674)
chr4 (17-139)||(21441599-21441721)
chr4 (148-226)||(30938193-30938271)
chr4 (17-139)||(53369890-53370012)
chr4 (18-78)||(52813620-52813680)
chr4 (21-144)||(50146913-50147036)
chr4 (17-140)||(50606026-50606149)
chr4 (155-229)||(39509101-39509175)
chr4 (18-139)||(26632955-26633076)
chr4 (38-139)||(46944544-46944645)
chr4 (148-216)||(42644894-42644962)
chr4 (21-72)||(6866170-6866221)
chr4 (155-202)||(19680786-19680833)
chr4 (17-140)||(45674853-45674976)
chr4 (162-209)||(49576885-49576932)
chr4 (145-199)||(12821989-12822043)
chr4 (17-139)||(19852996-19853118)
chr4 (142-200)||(32046664-32046722)
chr4 (147-216)||(8931068-8931137)
chr4 (53-134)||(28470873-28470953)
chr4 (155-200)||(38869799-38869844)
chr4 (18-139)||(40797849-40797970)
chr4 (18-86)||(13455720-13455788)
chr4 (36-136)||(27891424-27891523)
chr4 (21-133)||(32397704-32397816)
chr4 (17-77)||(44791305-44791365)
chr4 (165-205)||(46295138-46295178)
chr4 (17-77)||(49821000-49821060)
chr4 (155-202)||(4249208-4249255)
chr4 (33-140)||(4274555-4274662)
chr4 (19-138)||(19455159-19455278)
chr4 (163-202)||(23377995-23378034)
chr4 (163-202)||(37109349-37109388)
chr4 (21-76)||(48339162-48339217)
chr4 (148-202)||(7539614-7539668)
chr4 (155-205)||(19238572-19238622)
chr4 (155-201)||(31759657-31759703)
chr4 (163-221)||(37274438-37274496)
chr4 (36-78)||(38791729-38791771)
chr4 (18-76)||(48151189-48151247)
chr4 (17-139)||(48977594-48977716)
chr4 (183-240)||(49262643-49262701)
chr4 (165-202)||(7949452-7949489)
chr4 (155-200)||(8030204-8030249)
chr4 (18-79)||(24007963-24008024)
chr4 (18-71)||(25134593-25134646)
chr4 (155-200)||(31826640-31826685)
chr4 (165-206)||(37980142-37980182)
chr4 (165-205)||(8325374-8325414)
chr4 (38-78)||(12673089-12673129)
chr4 (165-205)||(32992653-32992693)
chr4 (145-229)||(40813289-40813373)
chr4 (148-204)||(47044741-47044797)
[»] chr8 (31 HSPs)
chr8 (18-142)||(43967529-43967653)
chr8 (18-139)||(34655054-34655175)
chr8 (38-139)||(17865388-17865489)
chr8 (18-140)||(3307953-3308075)
chr8 (21-139)||(33279977-33280095)
chr8 (17-139)||(453501-453623)
chr8 (38-139)||(9412524-9412625)
chr8 (17-77)||(11161590-11161650)
chr8 (21-129)||(27189092-27189200)
chr8 (163-202)||(3624619-3624658)
chr8 (142-205)||(36205213-36205276)
chr8 (148-202)||(3058047-3058101)
chr8 (148-202)||(23361647-23361701)
chr8 (39-141)||(39478090-39478192)
chr8 (21-86)||(1091749-1091814)
chr8 (18-143)||(9135971-9136096)
chr8 (155-200)||(11819807-11819852)
chr8 (155-200)||(27750761-27750806)
chr8 (35-130)||(43384830-43384925)
chr8 (163-217)||(968401-968455)
chr8 (166-204)||(19703483-19703521)
chr8 (21-79)||(23181177-23181235)
chr8 (167-217)||(28787479-28787529)
chr8 (21-75)||(34516160-34516214)
chr8 (149-202)||(13129693-13129746)
chr8 (148-229)||(30774707-30774788)
chr8 (155-200)||(44780114-44780159)
chr8 (163-203)||(16852379-16852419)
chr8 (53-89)||(28492711-28492747)
chr8 (163-203)||(28783099-28783139)
chr8 (167-215)||(29855404-29855451)
[»] chr2 (41 HSPs)
chr2 (18-130)||(2646983-2647095)
chr2 (18-139)||(18667770-18667891)
chr2 (18-136)||(44740486-44740604)
chr2 (18-139)||(3409188-3409309)
chr2 (21-139)||(11027930-11028048)
chr2 (17-139)||(27634689-27634811)
chr2 (17-139)||(41959161-41959283)
chr2 (22-135)||(24844670-24844783)
chr2 (18-136)||(11006977-11007093)
chr2 (27-141)||(27902437-27902551)
chr2 (17-139)||(33831513-33831635)
chr2 (17-139)||(36538674-36538796)
chr2 (145-202)||(6859310-6859367)
chr2 (21-138)||(30713178-30713295)
chr2 (17-77)||(26436372-26436432)
chr2 (148-204)||(29503295-29503351)
chr2 (17-77)||(33164042-33164102)
chr2 (148-206)||(39715016-39715074)
chr2 (148-221)||(14780530-14780603)
chr2 (155-204)||(23052519-23052568)
chr2 (18-139)||(40458940-40459061)
chr2 (18-78)||(17616286-17616346)
chr2 (141-229)||(27244325-27244413)
chr2 (39-139)||(27464572-27464672)
chr2 (142-201)||(33839259-33839319)
chr2 (17-77)||(34064723-34064783)
chr2 (19-78)||(9963779-9963838)
chr2 (162-221)||(33569837-33569896)
chr2 (22-73)||(34116239-34116290)
chr2 (166-205)||(37480117-37480156)
chr2 (24-79)||(38409631-38409686)
chr2 (163-202)||(42327393-42327432)
chr2 (155-221)||(7799014-7799080)
chr2 (148-229)||(9776330-9776409)
chr2 (148-202)||(16918576-16918630)
chr2 (148-202)||(19322792-19322846)
chr2 (162-200)||(21195676-21195714)
chr2 (94-135)||(17368994-17369035)
chr2 (165-205)||(6099514-6099553)
chr2 (148-204)||(17737620-17737676)
chr2 (165-221)||(26482134-26482189)
[»] chr3 (46 HSPs)
chr3 (18-140)||(5418697-5418819)
chr3 (18-140)||(25253721-25253843)
chr3 (17-139)||(39135372-39135494)
chr3 (20-142)||(44574547-44574669)
chr3 (17-142)||(39469528-39469653)
chr3 (18-139)||(52199448-52199569)
chr3 (18-142)||(9505118-9505242)
chr3 (38-141)||(19560772-19560875)
chr3 (21-140)||(33438730-33438849)
chr3 (21-139)||(54393443-54393561)
chr3 (17-139)||(32689187-32689309)
chr3 (17-139)||(46293213-46293335)
chr3 (155-202)||(28703402-28703449)
chr3 (155-202)||(39253728-39253775)
chr3 (18-105)||(52934831-52934918)
chr3 (18-139)||(12710721-12710842)
chr3 (155-204)||(14339641-14339690)
chr3 (17-130)||(41609906-41610018)
chr3 (165-226)||(47454591-47454652)
chr3 (155-215)||(47279389-47279449)
chr3 (155-202)||(30311337-30311384)
chr3 (145-202)||(37051292-37051349)
chr3 (18-139)||(40943580-40943701)
chr3 (164-205)||(47236966-47237007)
chr3 (155-199)||(2667893-2667937)
chr3 (18-130)||(28687091-28687203)
chr3 (18-130)||(39942809-39942921)
chr3 (160-204)||(49494142-49494186)
chr3 (182-229)||(34928912-34928959)
chr3 (148-202)||(4844509-4844563)
chr3 (148-202)||(4870205-4870259)
chr3 (155-229)||(44743826-44743900)
chr3 (155-200)||(8075127-8075172)
chr3 (165-202)||(14186688-14186725)
chr3 (163-204)||(17108894-17108935)
chr3 (18-139)||(30662131-30662252)
chr3 (165-202)||(37788463-37788500)
chr3 (18-86)||(50965422-50965491)
chr3 (18-86)||(51068557-51068626)
chr3 (155-199)||(15048062-15048106)
chr3 (165-205)||(16900676-16900716)
chr3 (165-205)||(19716238-19716278)
chr3 (162-202)||(27093359-27093399)
chr3 (18-78)||(28242602-28242662)
chr3 (148-216)||(42430358-42430424)
chr3 (158-202)||(51766929-51766973)
[»] scaffold0171 (1 HSPs)
scaffold0171 (38-139)||(21127-21227)
[»] scaffold0224 (1 HSPs)
scaffold0224 (22-141)||(7306-7425)
[»] scaffold0316 (1 HSPs)
scaffold0316 (17-139)||(19314-19436)
[»] scaffold0291 (1 HSPs)
scaffold0291 (148-206)||(2464-2522)
[»] scaffold0223 (1 HSPs)
scaffold0223 (53-139)||(14480-14566)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-130)||(124490-124603)
[»] scaffold0008 (1 HSPs)
scaffold0008 (155-229)||(49337-49411)
[»] scaffold0025 (1 HSPs)
scaffold0025 (18-139)||(11409-11530)
[»] scaffold0004 (1 HSPs)
scaffold0004 (145-226)||(81538-81619)
[»] scaffold0299 (1 HSPs)
scaffold0299 (155-202)||(11559-11606)
[»] scaffold0204 (1 HSPs)
scaffold0204 (21-76)||(26684-26739)
[»] scaffold0194 (1 HSPs)
scaffold0194 (163-202)||(13044-13083)
[»] scaffold0954 (1 HSPs)
scaffold0954 (17-79)||(244-306)
[»] scaffold0260 (2 HSPs)
scaffold0260 (17-130)||(10007-10120)
scaffold0260 (17-86)||(11487-11556)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 11595917 - 11595796
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11595917 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttg 11595818  T
Q  118 tatcggttcattgtcagcccta 139  Q
    ||||||||||||||||||||||    
T  11595817 tatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 45055752 - 45055864
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45055752 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttg 45055851  T
Q  118 tatcggttcattg 130  Q
    |||||||||||||    
T  45055852 tatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 40480172 - 40480050
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggt-catgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40480172 ttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacgaactaattaccgactcgagttccgaactttattcgagtt 40480073  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    ||||| |||||||  ||||||||    
T  40480072 gtatcagttcattaccagcccta 40480050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 7447899 - 7448021
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||| |||| ||||  || ||||| ||  ||||| ||||||||||    
T  7447899 attaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagtt 7447998  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||||||||||||    
T  7447999 ggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 20401019 - 20401142
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||| ||||||||| |||||||||||||| | ||  | || ||||||||||| ||||| | ||||||||||| ||||| || |||||| ||||||||||    
T  20401019 attaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccgagtcgaatttcgaactatattcgagtt 20401118  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  |||||||||||||| ||||||    
T  20401119 ggttcggttcattgtcaaccctac 20401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 33935532 - 33935653
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||  |||||| ||  |||||| || |||| |  ||||||||    
T  33935532 ttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtcccaaactattgtcgagttg 33935631  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||| ||||||| ||||||||    
T  33935632 gttcgattcattgccagcccta 33935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 49034342 - 49034224
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    |||| |||||| || | |||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  |||| || |||||| | ||||||||| ||    
T  49034342 acgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgagttggat 49034243  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||| ||| ||||||||    
T  49034242 cggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 45176268 - 45176391
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||| |||||| |||||||||| ||||||||||||||||||| | |||||| || ||||| |  | |||| || |||||||    
T  45176268 attaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcgagtcgaatgtcaaactataatcgagtt 45176367  T
Q  117 gtatcggttcattgtcagccctac 140  Q
       |||||||||||| || |||||    
T  45176368 tgttcggttcattgttagtcctac 45176391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 5776252 - 5776130
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  5776252 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 5776153  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| || |||||    
T  5776152 ggttcggttcattgccaacccta 5776130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 26719839 - 26719965
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || | |||||||||| ||| ||||| ||||||||||||| ||| |||| ||||| ||  ||||||  |||||| | |||||||||    
T  26719839 ttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttg 26719938  T
Q  118 tatcggttcattgtcagccctacttga 144  Q
      ||| ||||||||||| |||| ||||    
T  26719939 gttcgattcattgtcagtcctagttga 26719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 28949880 - 28949758
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| |||||||||| | | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  28949880 attaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 28949781  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  28949780 gattcggttcattgccagcccta 28949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 37085594 - 37085528
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    ||||||||||||||||||||| || || |||| ||||||||||||||||||||| | ||||||||||    
T  37085594 ttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtg 37085528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 37334301 - 37334423
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||| || ||  |||| |  |||||| || |||||||    
T  37334301 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaatgtcgaactataatcgagtt 37334400  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  |||||||||||||| |||||    
T  37334401 ggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 44422023 - 44421901
Alignment:
Q  18 ttaacgaacttaatcttt-agctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    |||||||||||||  ||| ||||||||||| |||||||||| ||||||||||||||||||||  |||||  ||  |||||| || |||| |  |||||||    
T  44422023 ttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagtt 44421924  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  44421923 ggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 5795058 - 5794933
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || ||| |||    
T  5795058 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgggtt 5794959  T
Q  117 gtatcggttcattgtcagccctactt 142  Q
    |  ||||||||||| |||||||||||    
T  5794958 ggttcggttcattgccagccctactt 5794933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 22760887 - 22760960
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    |||||| ||||||  ||||||||||||| || |||||||||||||||||||||||||| |||| ||||| ||||    
T  22760887 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgagtg 22760960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 33899065 - 33898944
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| ||||||||||||| ||| |||||||||  ||  |||| |  |||||| | |||||||||    
T  33899065 ttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatcgaactattttcgagttg 33898966  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||||||||    
T  33898965 gttcggttcattgtcagcccta 33898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 36927022 - 36927143
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| |||||||||||| |  |||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  36927022 attaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 36927121  T
Q  117 gtatcggttcattgtcagccct 138  Q
    |  ||||||||||| |||||||    
T  36927122 ggttcggttcattgccagccct 36927143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 665969 - 665845
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||| || |||| | ||| || || ||||| |  |||||| || |||||||    
T  665969 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 665870  T
Q  117 gtatcggttcattgtcagccctact 141  Q
    |  ||||||||||| ||||||||||    
T  665869 ggttcggttcattgccagccctact 665845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 3942203 - 3942323
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||  || || ||||| ||||||||||||||||| |||  || |  ||  |||| || ||||||||| ||||||||  |    
T  3942203 acgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaattacgaactttaatcgagttggtt 3942302  T
Q  121 cggttcattgtcagccctact 141  Q
    |||||||||||||||||||||    
T  3942303 cggttcattgtcagccctact 3942323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 48634471 - 48634531
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||||||||||||| ||||||||||||||  ||| ||||| ||||||||||||||||||||    
T  48634471 ttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacga 48634531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 3930838 - 3930720
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||| ||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  3930838 attaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 3930739  T
Q  117 gtatcggttcattgtcagc 135  Q
    || ||||||||||| ||||    
T  3930738 gtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 10618945 - 10619055
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||| ||| | ||||||||||||||||||||  |||||  ||  ||||||||| |||| |  ||||||||    
T  10618945 ttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagttccaaactattgtcgagttg 10619044  T
Q  118 tatcggttcat 128  Q
      |||||||||    
T  10619045 attcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 29196926 - 29196980
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgatt 199  Q
    |||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||    
T  29196926 tgatattggtttgggacttggaagtgtgctcgtcttcaaggtctcaggttcgatt 29196980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 21760684 - 21760583
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||| ||| ||||| || ||||| ||||||||||||  ||||| ||  ||||||| |||||| | |||||||||  |||||||||| |||||||    
T  21760684 ctcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtttcgaactattttcgagttggttcggttcattatcagccc 21760585  T
Q  138 ta 139  Q
    ||    
T  21760584 ta 21760583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 22075087 - 22075208
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||| ||||| || ||||||| |||||||||  |||||  ||  ||||||||  |||| |  ||||||||    
T  22075087 ttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagttctaaactattatcgagttg 22075186  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| ||||||||    
T  22075187 gttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 36472463 - 36472524
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    ||||||| |||||| || | |||||||||||||| ||||| |||||||||||||||||||||    
T  36472463 ttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaa 36472524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 36877266 - 36877185
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    |||||| |||||| ||| |||| ||||| ||||||||||| ||| ||||||||| |||| ||||| |||||||| |||||||    
T  36877266 tattgacttgggacttgagagtatgctcctcttcaaggtcgcagattcgattcttcccagtgctagtttaagtgcgttaatt 36877185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 18250094 - 18249994
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||| ||| ||||| |||||||||||||||||||||  ||||| ||  ||||||   ||||| | |||||||||  ||||||||||| ||||||    
T  18250094 ctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgagttggttcggttcattgccagccc 18249995  T
Q  138 t 138  Q
    |    
T  18249994 t 18249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 42072106 - 42072230
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||| ||||||||||| | ||  || ||  |||| |  | |||| || |||||||    
T  42072106 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgaatcgaatgtcaaactataatcgagtt 42072205  T
Q  117 gtatcggttcattgtcagccctact 141  Q
    || ||||| ||||||||||||||||    
T  42072206 gtttcggtacattgtcagccctact 42072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 33124719 - 33124841
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || |||||||||||   || ||||| |||| |||||||||||||||  |||||  ||  ||||||| | |||| |  ||||||||    
T  33124719 ttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaactattgtcgagttg 33124818  T
Q  118 tatcggttcattgtcagccctac 140  Q
      ||||||||||| |||||||||    
T  33124819 gttcggttcattgccagccctac 33124841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 37106853 - 37106971
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| ||||||||||||||||||| |||||  ||| ||| |||||| ||||| |||||| ||  |||| || |||||| || | |||| |  |    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| || |||||    
T  37106953 cggttcattgccaacccta 37106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 41519316 - 41519262
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||||| ||||||||||| || ||||||||||||||||| |||||    
T  41519316 tattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctc 41519262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 43052895 - 43053017
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| ||  |||||||| | |||| || || ||||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  43052895 attaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 43052994  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| || |||||    
T  43052995 ggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 222347 - 222226
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||| ||||| || || |||||||| |||||||||| ||||||||||| ||||||||  |||||  ||  || ||| || |||| |  ||||||||    
T  222347 ttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcccaaactattgtcgagttg 222248  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| ||||||||    
T  222247 gttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 7801204 - 7801253
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcga 197  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||||||||    
T  7801204 tattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 23552142 - 23552211
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    |||||| ||||||  ||||||||||||| || ||||||||||| ||||||||||| | ||||| ||||||    
T  23552142 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaattta 23552211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 32356985 - 32357106
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||||||| || || | ||||| |||||||| ||| | ||||||| ||||||||||||| |||||| ||  ||||||  |||||| | ||  |||||    
T  32356985 ttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctcgaactatttttaagttg 32357084  T
Q  118 tatcggttcattgtcagcccta 139  Q
      | ||||||||||||||||||    
T  32357085 gtttggttcattgtcagcccta 32357106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 43590938 - 43590987
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    |||||| |||||||||||||| || |||| ||||||||||||||||||||    
T  43590938 ttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccc 43590987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 13106833 - 13106766
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    |||||||||||||| ||| ||||| ||| || ||||||||||||||||||||||| |  ||||||||||    
T  13106833 tattgatttgggatctgg-agtgtactcctcctcaaggtctcaggttcgattctctctgatgctaattt 13106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 14058295 - 14058339
Alignment:
Q  166 gagtgtgctcttcttcaaggtctcaggttcgattctccccaatgc 210  Q
    |||||||||| || ||||||||||||||||||||||| |||||||    
T  14058295 gagtgtgctcatcctcaaggtctcaggttcgattctctccaatgc 14058339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 14368323 - 14368367
Alignment:
Q  166 gagtgtgctcttcttcaaggtctcaggttcgattctccccaatgc 210  Q
    |||||||||| || ||||||||||||||||||||||| |||||||    
T  14368323 gagtgtgctcatcctcaaggtctcaggttcgattctctccaatgc 14368367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 17608739 - 17608854
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || || ||||||||||||| ||||| |||| |||||||||| |||||  ||||   |  |||| || ||||||||  ||||||||  |    
T  17608739 acgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaatt---gaatcgaattacgaacttttatcgagttgatt 17608835  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||||| ||||||    
T  17608836 cggttcattgtcggcccta 17608854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 18056827 - 18056759
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    |||||| |||||  || ||||||||||| || | ||||||||||||||||||||||||  |||||||||    
T  18056827 tattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaattt 18056759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 26216295 - 26216355
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||| ||||||||||||||    
T  26216295 attaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacg 26216355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 29916842 - 29916802
Alignment:
Q  166 gagtgtgctcttcttcaaggtctcaggttcgattctcccca 206  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  29916842 gagtgtgctcctcctcaaggtctcaggttcgattctcccca 29916802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 48505910 - 48505850
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | |||| || || |||||||||||||||||||    
T  48505910 attaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacg 48505850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 388987 - 389082
Alignment:
Q  35 tagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattg 130  Q
    |||||||||||| ||||||| || ||||||||||||||||||| | ||| || || || || |  |||||| || ||||||||  |||||||||||    
T  388987 tagctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 15137584 - 15137631
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||| ||||||||||| || ||||||||||||||| |||||||    
T  15137584 ttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctc 15137631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 17041057 - 17041010
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||| ||||||||| || |||||||||||||||||||||||    
T  17041057 ttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctc 17041010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 18363731 - 18363774
Alignment:
Q  159 gatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||||||| || ||||||||||||||| |||||||    
T  18363731 gatttgggagtgtgctcctcctcaaggtctcaggtttgattctc 18363774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 20335876 - 20335829
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| |||||||||||||| || || ||||||||||||||||||||    
T  20335876 ttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 26459447 - 26459408
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  26459447 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 26459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 33140908 - 33140805
Alignment:
Q  33 tttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtc 132  Q
    |||||||||||||| | || |||   ||||||||||||||||||||  |||||  |  ||||| ||||||||| | |||||||||  |||||||||| ||    
T  33140908 tttagctcaagttcagttcatttcattcatgaaccaagttcaacgagttaattgtcaagtcgaattccgaactatgttcgagttgactcggttcattatc 33140809  T
Q  133 agcc 136  Q
    ||||    
T  33140808 agcc 33140805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 35543657 - 35543554
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||| ||| ||| | |||||||||||||||||||||  ||||| ||  | ||||  | |||| | |||||||||  ||| ||||||||||||||    
T  35543657 ctcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgattcattgtcagccc 35543558  T
Q  138 tact 141  Q
    ||||    
T  35543557 tact 35543554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 23227120 - 23227062
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaac 76  Q
    |||||||||||||| || ||||||||||| |||| ||||  ||||| ||||||||||||    
T  23227120 ttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaac 23227062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 23236273 - 23236215
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaac 76  Q
    |||||||||||||| || ||||||||||| |||| ||||  ||||| ||||||||||||    
T  23236273 ttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaac 23236215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 23237639 - 23237577
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    |||||||||||||||  ||| |||||||||||||  || || ||||||||||||| |||||||    
T  23237639 attaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaa 23237577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 33019369 - 33019443
Alignment:
Q  62 tgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 136  Q
    ||||||||||||||||||| ||||| ||  ||||||  |||||| | || ||||||  |||||||||||||||||    
T  33019369 tgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcattgtcagcc 33019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33171655 - 33171597
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaac 76  Q
    |||| ||||||||| |||||||||||||| |||| ||||| |||| || ||||||||||    
T  33171655 ttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaac 33171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 37401684 - 37401566
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || | |||||||| ||||| ||||| ||||||| |||||||||| ||  ||||  ||  |||| || |||||| || |||| |||  |    
T  37401684 acgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaactctaatcgaattggtt 37401585  T
Q  121 cggttcattgtcagcccta 139  Q
     ||||||||||||||||||    
T  37401584 tggttcattgtcagcccta 37401566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 41449794 - 41449884
Alignment:
Q  48 gctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccct 138  Q
    |||| ||||| ||||||||||||||||||||  |||||  ||  ||||||| |||||| |  ||||||||  |||| ||||||||||||||    
T  41449794 gctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 10096499 - 10096616
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatc 121  Q
    |||||||||| | | | ||||||||  ||| ||||| ||||||||||||||| | |||| ||||  || |||||||| |||||| | ||||| |||  ||    
T  10096499 cgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttcgatgaacaaattgtcgagtcgagtttcgaactatgttcgaattgcctc 10096598  T
Q  122 ggttcattgtcagcccta 139  Q
     |||||||| ||||||||    
T  10096599 agttcattgccagcccta 10096616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 17025482 - 17025361
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| || |||||||||||||||||   ||||| ||  ||||     ||||| | |||||||||    
T  17025482 ttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaaccttgaactattttcgagttg 17025383  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||||||||    
T  17025382 gttcggttcattgtcagcccta 17025361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 42711997 - 42712038
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    ||||||||||||| || ||||||||||| |||||||||||||    
T  42711997 tgggagtgtgctcctcctcaaggtctcatgttcgattctccc 42712038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 43215225 - 43215262
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||| || |||||||||||||||||||||||    
T  43215225 ggagtgtgctcctcctcaaggtctcaggttcgattctc 43215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 7499979 - 7499915
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatg 209  Q
    ||||||||  ||||||  || |||| ||||| ||||| |||||||||||||||||||||| ||||    
T  7499979 tgatattggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattctccctaatg 7499915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 25132413 - 25132363
Alignment:
Q  165 ggagtgtgctc-ttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  25132413 ggagtgtgctccttctt-aaggtctcaggttcgattct-cccaatgctaattt 25132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 46573733 - 46573673
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    ||||||| |||||| || | || ||||||| ||| ||||| ||||||||||||||||||||    
T  46573733 ttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacga 46573673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 41783344 - 41783465
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41783344 ttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttg 41783443  T
Q  118 tatcggttcattgtcagcccta 139  Q
    ||||||||||||||||||||||    
T  41783444 tatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 26218066 - 26218188
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26218066 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttatttgagttg 26218165  T
Q  118 tatcggttcattgtcagccctac 140  Q
    ||||||||||||| |||||||||    
T  26218166 tatcggttcattgccagccctac 26218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 14500827 - 14500703
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||    
T  14500827 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagtcgagttccgaactgtattcgagttg 14500728  T
Q  118 tatcggttcattgtcagccctactt 142  Q
    ||||||||||||  ||||| |||||    
T  14500727 tatcggttcatttccagccttactt 14500703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 11136127 - 11136034
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcg 112  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11136127 ttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcg 11136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 3801486 - 3801363
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||| |||| ||||  || ||||| || |||||| ||||||||||    
T  3801486 attaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattacgaactatattcgagtt 3801387  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  3801386 ggttcggttcattgccagccctac 3801363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 4983402 - 4983327
Alignment:
Q  63 gaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 139  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4983402 gaaccaagttcaacgaactaattaccgagtcgagt-ccgaactttattcgagttgtatcggttcattgccagcccta 4983327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 38522983 - 38522860
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||| ||||| ||||| ||||||||||||||||| | || ||||| || ||| | || |||||| ||||||||||    
T  38522983 attaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtcaaattacgaactatattcgagtt 38522884  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  38522883 ggttcggttcattgccagccctac 38522860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 20188995 - 20189115
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||| |||||  ||||| ||  || | || |||||| || ||||||||  |    
T  20188995 acgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttgatt 20189094  T
Q  121 cggttcattgtcagccctact 141  Q
    |||||||||||||||||||||    
T  20189095 cggttcattgtcagccctact 20189115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 32945139 - 32945021
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    |||| |||||| |||  |||||||||| ||| ||||| |||||||||||||| ||||||  ||||||||  ||||||| |||||| | |||||||||  |    
T  32945139 acgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactattttcgagttggtt 32945040  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||||||||||||    
T  32945039 cggttcattgtcagcccta 32945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 31021882 - 31022003
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||| |||||||| |  ||||||| ||| |||| ||||| |||||||||||  |||||||  |||||| || ||||||||||||||| |||||||||||    
T  31021882 ttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaactatattcgagttg 31021981  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||| ||||    
T  31021982 gttcggttcattgtcagtccta 31022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 31620886 - 31621009
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||| ||||||  ||| || || ||||||||||| ||||| | |||||||  || ||||| || |||||| ||||| ||||    
T  31620886 attaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcgagtcgaatttcgaactatattcaagtt 31620985  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  |||||||||||||||||||||    
T  31620986 ggttcggttcattgtcagccctac 31621009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 27906116 - 27906238
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  27906116 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 27906215  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  27906216 ggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 5382926 - 5382825
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||| ||||| ||||||||| ||||||| ||||||||||||| |||||||||  ||||||  |||||| | ||| |||||  || |||||||||||||||    
T  5382926 ctcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagccc 5382827  T
Q  138 ta 139  Q
    ||    
T  5382826 ta 5382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 27196097 - 27196218
Alignment:
Q  19 taacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgt 118  Q
    |||||| |||||| || | |||||||||| ||| ||||| ||||||||||| || ||||||  ||||| ||  ||||||  |||||| | |||||||||     
T  27196097 taacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtctcgaactattttcgagttgg 27196196  T
Q  119 atcggttcattgtcagccctac 140  Q
     |||||||||||||||||||||    
T  27196197 ttcggttcattgtcagccctac 27196218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 1840805 - 1840687
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || ||||||||||| |||| ||||| ||||||||||||||||||||  |||||  ||  | |||||| ||||| |  ||||||||  |    
T  1840805 acgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagttctgaactattgtcgagttggtt 1840706  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| || |||||    
T  1840705 cggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 18880210 - 18880328
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||| |||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  18880210 attaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 18880309  T
Q  117 gtatcggttcattgtcagc 135  Q
    |  ||||||||||||||||    
T  18880310 ggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 25979187 - 25979248
Alignment:
Q  141 ttgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||  |||| |||||||||||| ||| || |||||||||||||||||||||||    
T  25979187 ttgatgatattggcttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctc 25979248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 19282235 - 19282175
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    ||||||||| |||| || ||||||||||| |||| ||||| ||||||||||||||||||||    
T  19282235 ttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacga 19282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 15933197 - 15933304
Alignment:
Q  33 tttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtc 132  Q
    ||||||||| ||||  ||| || || ||||||||||||||||||||| ||| |  || ||||| || |||||| || ||||||||  ||||||||||| |    
T  15933197 tttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgcc 15933296  T
Q  133 agccctac 140  Q
    ||||||||    
T  15933297 agccctac 15933304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 20190701 - 20190650
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttc 73  Q
    |||||||||| || |||||||||||||||| ||||| |||||||||||||||    
T  20190701 cgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttc 20190650  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 84855 - 84905
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||||||||    
T  84855 ttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctcccc 84905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 10327984 - 10328070
Alignment:
Q  53 tttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 139  Q
    ||||| ||||||| |||||||||||||  ||||||||  |||||||  ||||  | |||||||||  ||||||||||||||||||||    
T  10327984 tttggttcatgaatcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagcccta 10328070  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 26078103 - 26078049
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||| ||||||| |||||||| ||||  ||||||||||||||||||||||||||    
T  26078103 tattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctc 26078049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 29328062 - 29328183
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||| ||| || ||||||| ||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  29328062 attaacgaacttaattttcagctcaagtccagct-gttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 29328160  T
Q  117 gtatcggttcattgtcagcccta 139  Q
       ||||||||||||||||||||    
T  29328161 tgttcggttcattgtcagcccta 29328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 43442220 - 43442274
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||| |||| ||| ||||||||||||| || |||||||||||||||||||||||    
T  43442220 tattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 43442274  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 2676038 - 2676130
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcga 113  Q
    ||||||||||| || |||||||||||| ||| ||||| ||||||||| ||||| |||||  ||||  ||| |||| || ||||||||| ||||    
T  2676038 acgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcgacgaatcaattgtcggatcgaattacgaactttaatcga 2676130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 25627095 - 25627135
Alignment:
Q  162 ttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  25627095 ttgggagtgtgctcctcctcaaggtctcaggttcgattctc 25627135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 37229051 - 37229083
Alignment:
Q  174 tcttcttcaaggtctcaggttcgattctcccca 206  Q
    |||||||||||||||||||||||||||||||||    
T  37229051 tcttcttcaaggtctcaggttcgattctcccca 37229083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 14285200 - 14285239
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  14285200 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 14285239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 16773831 - 16773885
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||  ||||||||||||| || || ||||||||||||||||||||    
T  16773831 tattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16773885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 28205879 - 28205833
Alignment:
Q  143 gatgatattgatttgggatttgggagtgtgctcttcttcaaggtctc 189  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||||||    
T  28205879 gatgatattgatttggaatttggaagtgtgcttttcttaaaggtctc 28205833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 12877718 - 12877771
Alignment:
Q  149 attgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||| ||||||||||||||||||| |  || |||| ||||||||||||||||||    
T  12877718 attggtttgggatttgggagtgtgtttctcctcaatgtctcaggttcgattctc 12877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 14495857 - 14495788
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    |||||| ||||||| ||||||||||||| || || ||||||||| || ||||||| || |||| ||||||    
T  14495857 tattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaattta 14495788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 17028309 - 17028264
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || ||||||||||||||| |||||    
T  17028309 ttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattc 17028264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 39327127 - 39327074
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    ||||||||||||| || ||||||||| || |||||||||| ||||| |||||||    
T  39327127 tgggagtgtgctcctcctcaaggtcttagcttcgattctctccaatactaattt 39327074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 9842901 - 9842829
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    ||||||||| |||||| |||||||||||||| || || ||||||| ||||| | |||| || ||| |||||||    
T  9842901 tgatattgacttgggacttgggagtgtgctcctcctcgaggtctcgggttcaaatctctccgatgataattta 9842829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 10494004 - 10494072
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    ||||||| |||||| || | |||||||||| ||| ||||| |  ||||||||||||||||||| |||||    
T  10494004 ttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaatta 10494072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 29982060 - 29982020
Alignment:
Q  177 tcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    |||||||| ||||||||||||||||| ||||||| ||||||    
T  29982060 tcttcaagatctcaggttcgattctctccaatgccaattta 29982020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 19508547 - 19508661
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19508547 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttg 19508646  T
Q  118 tatcggttcattgtc 132  Q
    |||||||||||||||    
T  19508647 tatcggttcattgtc 19508661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 43087588 - 43087466
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  43087588 attaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccgagtcgagttccgaactttattcaagtt 43087489  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    ||||| |||||||||||||||||    
T  43087488 gtatcagttcattgtcagcccta 43087466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 13645301 - 13645179
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||| |||||||||| |||||||||| |||||    
T  13645301 ttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagttaaatgaactaattaccgagtcgagttccaaactttattcaagttg 13645202  T
Q  118 tatcggttcattgtcagccctac 140  Q
    | | ||||||||| |||||||||    
T  13645201 tcttggttcattggcagccctac 13645179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 141 - 274
Target Start/End: Complemental strand, 27223189 - 27223056
Alignment:
Q  141 ttgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaa-ttagtttcttca 239  Q
    |||||| |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  27223189 ttgatggtattgacttaggatctgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatactaatttaagtgggttaatttagtttcttca 27223090  T
Q  240 acnnnnnnnntagtattgttgttttgagttttgag 274  Q
    ||        |||||||||||||||||||||||||    
T  27223089 ac-aaaaaaatagtattgttgttttgagttttgag 27223056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 35810740 - 35810860
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||  ||||  ||  |||| || ||||||||| ||||||||  |    
T  35810740 acgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggtt 35810839  T
Q  121 cggttcattgtcagccctact 141  Q
    |||||||||| ||||||||||    
T  35810840 cggttcattgccagccctact 35810860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 47602984 - 47602860
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  47602984 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 47602885  T
Q  117 gtatcggttcattgtcagccctact 141  Q
    |  ||||||||||||||||||||||    
T  47602884 ggttcggttcattgtcagccctact 47602860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 45653551 - 45653433
Alignment:
Q  19 taacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgt 118  Q
    ||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||  ||  |||||||  ||||| | |||||||||     
T  45653551 taacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcgaatcgagttttgaactattttcgagttg- 45653453  T
Q  119 atcggttcattgtcagccct 138  Q
     |||||||||||| ||||||    
T  45653452 gtcggttcattgttagccct 45653433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 25125003 - 25124885
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||| ||||| || |||||||||||||||| ||||| |||||||||||||||||||||  ||||| |   |||| || ||||||||| ||||||||  |    
T  25125003 acgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaatcgaattacgaactttaatcgagttggtt 25124904  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| ||||||||    
T  25124903 cggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 50447360 - 50447481
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || || ||||||||||||| ||||| |||| ||||||||| |||||| |||||| ||  ||||||  |||||| | |||||||||    
T  50447360 ttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagtctcgaactattttcgagttg 50447459  T
Q  118 tatcggttcattgtcagcccta 139  Q
      | ||||||||||||||||||    
T  50447460 gtttggttcattgtcagcccta 50447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 12224678 - 12224574
Alignment:
Q  36 agctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagc 135  Q
    |||||||||||||||| ||||| ||||||||||||||||||||  |||||  ||  |||| ||||||||| |  ||||||||  ||||||||||||||||    
T  12224678 agctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcattgtcagc 12224579  T
Q  136 cctac 140  Q
    |||||    
T  12224578 cctac 12224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 27223055 - 27222991
Alignment:
Q  370 tatgcttatgcctctgttttgagcctttaacaacccacatgat-ttaagaaagaattatcttctc 433  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  27223055 tatgcttatgactctgttttgagcctttaacaacccacatgatcttaagaaagaatgatcttctc 27222991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 24469939 - 24469816
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  24469939 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 24469840  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  24469839 ggttcggttcattgccagccctac 24469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 45581129 - 45581006
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||| ||||||||| ||  ||||||||||  ||| ||||| ||||||||||||||||||||  |||||| ||  ||||||| |||||| | ||| |||||    
T  45581129 ttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcaagttg 45581030  T
Q  118 tatcggttcattgtcagccctact 141  Q
      ||||||||||||||||||||||    
T  45581029 gttcggttcattgtcagccctact 45581006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 15306512 - 15306634
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||| ||||||||| ||  |||||||||| |||| ||||| ||||||||||||||||| ||| |||||| ||  |||||||||||||| |  || |||||    
T  15306512 ttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagttccgaactattgtcaagttg 15306611  T
Q  118 tatcggttcattgtcagccctac 140  Q
      ||||||||||| |||||||||    
T  15306612 gttcggttcattgccagccctac 15306634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 44596536 - 44596662
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || || |||||||| |||| ||||| ||||||||||| ||||||||  |||||  ||  ||||||||| |||| |  ||||||||    
T  44596536 ttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactattgtcgagttg 44596635  T
Q  118 tatcggttcattgtcagccctacttga 144  Q
      ||||||||||| |||||||||||||    
T  44596636 gttcggttcattgccagccctacttga 44596662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 21680776 - 21680656
Alignment:
Q  19 taacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgt 118  Q
    ||||||||||||| ||||||||||||||||||| |||   |||| |||||||||||||||  |||||| ||  ||||||| |||||| | |||||| ||     
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctgg 21680677  T
Q  119 atcggttcattgtcagcccta 139  Q
     ||||||||||| || |||||    
T  21680676 ttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 31869613 - 31869737
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || |||| ||||||||||| ||||| ||||||||||||||||||||  |||||  ||  || ||||||||||| |  |||| ||     
T  31869613 ttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagttccgaactattgtcgaatta 31869712  T
Q  118 tatcggttcattgtcagccctactt 142  Q
      ||||||||||||| |||||||||    
T  31869713 gttcggttcattgtcggccctactt 31869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 7702853 - 7702976
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| |  ||||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  7702853 attaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 7702952  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  7702953 ggttcggttcattgccagccctac 7702976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 148
Target Start/End: Complemental strand, 14578703 - 14578577
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || ||||| |||||||||| ||||| |||||||||||||||||| ||  ||||  |   |||| || |||||| || ||||||||  |    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  121 cggttcattgtcagccctacttgatgat 148  Q
    ||||||||||||||||||| ||||||||    
T  14578603 cggttcattgtcagcccta-ttgatgat 14578577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 7016196 - 7016075
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||| |||||| | || ||||||||||| |||| ||||| |||||||||||||||||| ||  ||||  ||  ||||||  |||| ||| |||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||||||||    
T  7016096 gttcggttcattgtcagcccta 7016075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 29677620 - 29677516
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||| ||| ||||| || ||||||||||||||||||| ||||| |   ||||||  |||||| | |||||||||  ||||||||||| ||||||    
T  29677620 ctcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcattgccagccc 29677521  T
Q  138 tactt 142  Q
    |||||    
T  29677520 tactt 29677516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 39802888 - 39802765
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || | |||||||||| ||| ||||| |||||||||| |||||||||| ||| | |||   |||||  |||||| | |||||||||    
T  39802888 ttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtctcgaactattttcgagttg 39802789  T
Q  118 tatcggttcattgtcagccctact 141  Q
      ||| ||||||| ||||||||||    
T  39802788 gttcgattcattgccagccctact 39802765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 42916231 - 42916112
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatc 121  Q
    |||||||||| || |||||||||||||||| ||||| ||||||||||||||| |||||  ||||| ||  |||| || |||||  || |||| |||  ||    
T  42916231 cgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttc 42916132  T
Q  122 ggttcattgtcagccctact 141  Q
    ||||||||| || |||||||    
T  42916131 ggttcattgccacccctact 42916112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 9964456 - 9964530
Alignment:
Q  142 tgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    ||||| |||||| ||||||| |||||||||||||||| |||| |||||||||| |||| || ||| |||||||||    
T  9964456 tgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtgctaattt 9964530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 15257292 - 15257170
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| ||||||||||||| ||| |||| ||||| ||  ||||||  | |||| | || ||||||    
T  15257292 ttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaactatttttgagttg 15257193  T
Q  118 tatcggttcattgtcagccctac 140  Q
      |||||||||||||||||||||    
T  15257192 gttcggttcattgtcagccctac 15257170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 23916832 - 23916950
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||| ||||| ||||| | ||||||||||||  | |||  ||||| ||  |||| || ||||||||| ||||||||  |    
T  23916832 acgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaattacgaactttaatcgagttggtt 23916931  T
Q  121 cggttcattgtcagcccta 139  Q
     ||||||||||||||||||    
T  23916932 tggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 32179876 - 32179998
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | |||| || || | ||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  32179876 attaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 32179975  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  32179976 ggttcggttcattgccagcccta 32179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 31816622 - 31816703
Alignment:
Q  53 tttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcag 134  Q
    ||||| |||||||||||||||||||||  ||||||||  | ||||| |||||| | |||||||||  |||||||||||||||    
T  31816622 tttggttcatgaaccaagttcaacgaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattgtcag 31816703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 7596416 - 7596524
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatc 121  Q
    |||||||||| || |||||||||||||||| ||||| |||| |||||||||| |||||  ||||| ||  || | || |||||| || ||||||||  ||    
T  7596416 cgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttggttc 7596515  T
Q  122 ggttcattg 130  Q
    |||||||||    
T  7596516 ggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 15014339 - 15014455
Alignment:
Q  23 gaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcg 122  Q
    ||||||||| || | |||||||||||||| ||||| ||||||| ||||||| |||||  ||||| ||  |||| || |||||| || ||||||||  |||    
T  15014339 gaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcg 15014438  T
Q  123 gttcattgtcagcccta 139  Q
    |||||||| || |||||    
T  15014439 gttcattgccaacccta 15014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 27076636 - 27076568
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    |||||||||||||  || |||||||||||||||| ||| | ||||| ||||||||||||||| ||||||    
T  27076636 ttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaatta 27076568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 37441308 - 37441248
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||||||||||||||||||    
T  37441308 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 37441248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 40810497 - 40810545
Alignment:
Q  154 tttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||||    
T  40810497 tttgggatctgggagtgtgttcctcttcaaggtctcaggttcgattctc 40810545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 42937096 - 42937216
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||||||||| ||||  ||||||||||||||| |||||  ||||   |  |||| || |||||| || ||||||||  |    
T  42937096 acgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttgaatcgaattacgaactctaatcgagttggtt 42937195  T
Q  121 cggttcattgtcagccctact 141  Q
    | |||||||| ||||||||||    
T  42937196 cagttcattgccagccctact 42937216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 48575198 - 48575130
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccg 89  Q
    ||||||||||| || |  |||||||||  |||||||| ||||||||||||||||||||| |||||||||    
T  48575198 acgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaattaccg 48575130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 15786365 - 15786318
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||    
T  15786365 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 15786318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 3265948 - 3266002
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| |||| | |||||||||||||| || |||||||||||||||||||||||    
T  3265948 tattgacttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctc 3266002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 7841665 - 7841762
Alignment:
Q  41 aagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 139  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||| ||  ||||||  |||| | | |||||||||  ||||||||||| ||||||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 14770634 - 14770580
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaa 75  Q
    ||||||||||| ||||| ||||||||||||| ||||| |||| ||||||||||||    
T  14770634 acgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 15662971 - 15663029
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    ||||||||||| || |||||||||||||||| |||||  |||||||||||||| |||||    
T  15662971 acgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaa 15663029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 27567179 - 27567105
Alignment:
Q  143 gatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    ||||||||||| |||| |  || |||||||||| ||||||||||||||| ||||||| || | ||||||||||||    
T  27567179 gatgatattgacttggaacctgagagtgtgctcctcttcaaggtctcagattcgattttctctaatgctaattta 27567105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36419119 - 36419241
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| ||  |||||||| | |||| || || ||||||||||||||| ||| | ||| || || ||||| |  |||||| || |||||||    
T  36419119 attaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaatgtcgaactataatcgagtt 36419218  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  36419219 ggttcggttcattgccagcccta 36419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 6122825 - 6122870
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  6122825 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattc 6122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 12587291 - 12587348
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||| ||||||| || |||||||||| || || ||||||||||||||||||||    
T  12587291 tgatattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctc 12587348  T

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Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 14796643 - 14796724
Alignment:
Q  54 ttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagc 135  Q
    |||| |||||||||| |||||||||| |||||| || ||| |||||||||||||  |||||||   |||||| |||||||||    
T  14796643 ttggttcatgaaccacgttcaacgaattaattatcgagtcaagttccgaactttgatcgagttagctcggtttattgtcagc 14796724  T

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Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 14805517 - 14805598
Alignment:
Q  54 ttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagc 135  Q
    |||| |||||||||| |||||||||| |||||| || ||| |||||||||||||  |||||||   |||||| |||||||||    
T  14805517 ttggttcatgaaccacgttcaacgaattaattatcgagtcaagttccgaactttgatcgagttagctcggtttattgtcagc 14805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 28006369 - 28006490
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| ||||||||||||||||||||   ||||| ||  |||| |  |||||| | |||||||||    
T  28006369 ttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttg 28006468  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| | ||||||    
T  28006469 gttcggttcattgccggcccta 28006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 46265061 - 46265004
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    |||||||||| || |||||||||||||||| ||| | ||||||||||||||| |||||    
T  46265061 cgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaa 46265004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 5204590 - 5204530
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||||||||||||| || | |||||||||| ||| ||||| ||| ||||||||||||||||    
T  5204590 ttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacga 5204530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 18037671 - 18037611
Alignment:
Q  142 tgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||| ||||||| |||||||||||||| | ||| || ||||| |||||||||||    
T  18037671 tgatgatattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctc 18037611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 23915718 - 23915658
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||| ||||||||| || |||| |||||| |||| ||||| ||||||||||||||||||||    
T  23915718 ttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacga 23915658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 38947510 - 38947466
Alignment:
Q  162 ttgggagtgtgctcttcttcaaggtctcaggttcgattctcccca 206  Q
    |||||||||||||| || |||||||||||||||||||||| ||||    
T  38947510 ttgggagtgtgctcctcctcaaggtctcaggttcgattcttccca 38947466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 51814512 - 51814572
Alignment:
Q  142 tgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||| |||||| ||| ||| || |||||||||| || |||||||||||||||||||||||    
T  51814512 tgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctc 51814572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 2799901 - 2799940
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  2799901 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 2799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 8177227 - 8177180
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||||||||||| || ||||||| |||||||||||||||    
T  8177227 ttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctc 8177180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 19528361 - 19528322
Alignment:
Q  166 gagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  19528361 gagtgtgctcctcctcaaggtctcaggttcgattctcccc 19528322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 33700810 - 33700771
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  33700810 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 33700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 952550 - 952616
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    ||||||||||||| || |||| |||||||||| |||||||||| |||  |||||| ||| |||||||    
T  952550 tgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaatttaggtgggttaatt 952616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 4825012 - 4825050
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcc 203  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  4825012 ggagtgtgctcctcttcaaggtctcaggtttgattctcc 4825050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 8904438 - 8904492
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||| || |||||||||| || ||||||||||| |||||||||||    
T  8904438 tattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctc 8904492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 47983289 - 47983395
Alignment:
Q  33 tttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtc 132  Q
    |||| |||||||||| ||| ||||| || ||||||||||||||| ||  ||||| ||  |||| |  |||||| | |||||||||  |||||||||||||    
T  47983289 tttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgtc 47983388  T
Q  133 agcccta 139  Q
    | |||||    
T  47983389 aacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 12259281 - 12259338
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| | ||||||||||||||||||||| || || | |||||| |||||||||||    
T  12259281 tgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 20347684 - 20347797
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || | || ||||||||||| |||||  |||||| ||| ||||||||| |||||  || ||| | ||   |||| ||||||||||    
T  20347684 attaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactatattcgagtt 20347783  T
Q  117 gtatcggttcattg 130  Q
    |  |||||||||||    
T  20347784 gattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 20349164 - 20349233
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    ||||||||||||||| || | || ||||||||||| |||||   ||||| ||||||||||||| ||||||    
T  20349164 attaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaatta 20349233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 52116826 - 52116777
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    |||||| |||||||||||||| || |||| ||||||||||| ||||||||    
T  52116826 ttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccc 52116777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 4280509 - 4280449
Alignment:
Q  142 tgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||||||||| |||||| ||| |||||||||  || | ||||||||||||| |||||||    
T  4280509 tgatgatattgacttgggacttgagagtgtgcttctcctgaaggtctcaggtttgattctc 4280449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 16170030 - 16169974
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    |||||| ||||||  |||||||||| || || ||||||| |||||||||||||||||    
T  16170030 tattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctccc 16169974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 40159751 - 40159683
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    |||||||||||||| || | |||||||||| ||| ||||  ||||||||||||| ||| |||| |||||    
T  40159751 ttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaatta 40159683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 43446004 - 43446044
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| || ||||||||||| ||||||||||||||    
T  43446004 ggagtgtgctcctcctcaaggtctcatgttcgattctcccc 43446044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 45266875 - 45266915
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  45266875 ggagtttgctcctcctcaaggtctcaggttcgattctcccc 45266915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 52029972 - 52029932
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  52029972 ggagtgtgctccttctcaaggtctcaggttcgattctcccc 52029932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 33110477 - 33110595
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33110477 ttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaactttattcgagttg 33110576  T
Q  118 tatcggttcattgtcagcc 136  Q
    ||||||||||||| |||||    
T  33110577 tatcggttcattgccagcc 33110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 22295935 - 22296057
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||| | ||||||||||||||||||||| |||||    
T  22295935 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaataaactaattactgagtcgagttccgaactttattcaagttg 22296034  T
Q  118 tatcggttcattgtcagccctac 140  Q
    | | ||||||||| |||||||||    
T  22296035 tcttggttcattggcagccctac 22296057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 5640370 - 5640251
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || || ||||||||||||| ||||| ||||||||||||||| |||||  ||||| ||  |||| || |||||| || ||||||||  |    
T  5640370 acgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggtt 5640271  T
Q  121 cggttcattgtcagccctac 140  Q
    |||||||||| |||||||||    
T  5640270 cggttcattgccagccctac 5640251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 3081840 - 3081716
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    |||||||| |||||| || | |||||||||| ||| ||||| || ||||||||||||||||||| ||||| ||  ||||||  |||||| | |||||| |    
T  3081840 attaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactattttcgagct 3081741  T
Q  117 gtatcggttcattgtcagccctact 141  Q
    |  ||||||||||| ||||||||||    
T  3081740 ggttcggttcattgccagccctact 3081716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 12633030 - 12633106
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||| ||||||||||| ||||||  ||||||||||    
T  12633030 tgatattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaatttaagtg 12633106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 9463474 - 9463363
Alignment:
Q  19 taacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgt 118  Q
    ||||||||||||| ||||| | || ||| |||| ||||| |||| ||| ||||| || ||  |||||| || ||||||||||||||||||||||||| ||    
T  9463474 taacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgagtcgagttccgaactttattcgagtagt 9463375  T
Q  119 atcggttcattg 130  Q
     |||||||||||    
T  9463374 ctcggttcattg 9463363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 1501867 - 1501988
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||||| || ||||| |||||||| |||||||||||  |||||  |   ||||||| |||||  |  ||||||||    
T  1501867 ttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaattgtcgagttg 1501966  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||||||||    
T  1501967 gttcggttcattgtcagcccta 1501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 10961914 - 10961796
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || ||||||| |||| ||| ||||| |||||||||||||||||||||  ||||  ||  || | || | ||||||| ||||||||  |    
T  10961914 acgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcaaattacaaactttaatcgagttggtt 10961815  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| ||||||||    
T  10961814 cggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 4441422 - 4441301
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || | ||||||||| |||| ||| | || ||||||||||||||||| ||||||  ||  ||||||| |||||| |  ||||||||    
T  4441422 ttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcgagtttcgaactattgtcgagttg 4441323  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| | ||||||    
T  4441322 gttcggttcattgccggcccta 4441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 10346739 - 10346799
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||||||||||||||||||    
T  10346739 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 10346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 13312041 - 13312164
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgag--ttccgaactttattcgagt 115  Q
    |||||||||||||| || | |||||||||| ||| ||||| ||||||||||||| ||| |||| ||||| ||  |||||  |  |||||| | |||||||    
T  13312041 ttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatatcgaactattttcgagt 13312140  T
Q  116 tgtatcggttcattgtcagcccta 139  Q
    ||  ||||||||||| ||||||||    
T  13312141 tggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 11460100 - 11460014
Alignment:
Q  53 tttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaact-ttattcgagttgtatcggttcattgtcagcccta 139  Q
    ||||| |||||||||||||||||||||  ||||| ||  |||||||||||||| ||||| |||||| |||||||||||| || |||||    
T  11460100 tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagttccgaactattatt-gagttggatcggttcattgccaacccta 11460014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 17441180 - 17441298
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    |||| |||||| || | |||||||||  ||| ||||| |||||||| |||||||||||| ||||||||   ||||||| |||||| | |||| ||||  |    
T  17441180 acgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactattttcgggttggtt 17441279  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| || |||||    
T  17441280 cggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 18095538 - 18095599
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    |||||||||||||| |||| |||||||||| ||  ||||| || ||||||||||||||||||    
T  18095538 ttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaa 18095599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 6999286 - 6999354
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    ||||| |||||||| || ||||||||||| |||| ||| | |||| |||||||||||||||| ||||||    
T  6999286 ttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaatta 6999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 9950878 - 9950826
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttc 73  Q
    ||||||||||| || | |||||||||||||| ||||| |||||||||||||||    
T  9950878 acgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 11306211 - 11306172
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  11306211 tgggagtatgctcatcttcaaggtctcaggttcgattctc 11306172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 14446225 - 14446288
Alignment:
Q  154 tttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    |||||||| ||| |||||||||||| |  || ||||||||||||||||||| ||||| ||||||    
T  14446225 tttgggatctggaagtgtgctcttcctttagatctcaggttcgattctccctaatgccaattta 14446288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 18099835 - 18099950
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||||||||||  ||| ||||| |||| ||| ||||| || ||||||||||||||||||   |||| ||  ||||||  | |||||| |||||||||    
T  18099835 ttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtctcaaacttttttcgagttg 18099934  T
Q  118 tatcggttcattgtca 133  Q
      | ||||||||||||    
T  18099935 gtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 30127439 - 30127477
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattct 201  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  30127439 tgggagtgtgctcctcttcgaggtctcaggttcgattct 30127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 33549143 - 33549209
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    ||||||||||||| || || |||||||||||||||||||| |  |||| |||||| ||||| |||||    
T  33549143 tgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatt 33549209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 7437323 - 7437444
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | || ||||||| ||| ||||| || |||||||||||||||||||  |||| ||  ||||||  |||||| | ||||||||     
T  7437323 ttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcgagtatcgaactattttcgagtta 7437422  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||  ||||||||    
T  7437423 gttcggttcattaccagcccta 7437444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 10338209 - 10338168
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccca 206  Q
    ||||||||||| || ||||||||||||||||||||| |||||    
T  10338209 ggagtgtgctcctcctcaaggtctcaggttcgattcccccca 10338168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 24641242 - 24641173
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    |||||| ||||||| ||||||||||||| || || |||| | |||||||||||||| || ||| ||||||    
T  24641242 tattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaattta 24641173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 6385886 - 6385954
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    |||||| ||||||  ||||| ||||||| || | ||||||||||||||||||||| ||  |||||||||    
T  6385886 tattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaattt 6385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 52706236 - 52706357
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||    
T  52706236 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaattaccgagtcaagttccgaattttattcgagttg 52706335  T
Q  118 tatcggttcattgtcagcccta 139  Q
    ||||||||||||| ||||||||    
T  52706336 tatcggttcattgccagcccta 52706357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 7505548 - 7505668
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||| ||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  7505548 ttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccgagtcaagttctgaactttattcgagttg 7505647  T
Q  118 tatcggttcattgtcagccct 138  Q
    |||||||||||||||||||||    
T  7505648 tatcggttcattgtcagccct 7505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 22721347 - 22721467
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| ||||||| ||||| | ||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  22721347 ttaacgaacttaat-tttagcttaagtttgcctcgtttggttcatgaaccaagttcaatgaactaattaccgaatcgagttccgaactttattcgagttg 22721445  T
Q  118 tatcggttcattgtcagcccta 139  Q
    | ||| ||||||| ||||||||    
T  22721446 tctcgattcattgccagcccta 22721467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 15697204 - 15697082
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| |||||||||||||| |||  ||||| ||||||| |||||||||||||  ||||  || |||||||  ||||||||||||||||||    
T  15697204 ttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtctcgaactttattcgagttg 15697105  T
Q  118 tatcggttcattgtcagccctac 140  Q
    | |||||||||||||||||||||    
T  15697104 tctcggttcattgtcagccctac 15697082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 11055347 - 11055226
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| ||  |||||||||| |||| ||||| ||||||||||||||||| ||  |||||| ||  |||||||||||||| |  ||||||||    
T  11055347 ttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactattgtcgagttg 11055248  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||||||||    
T  11055247 gttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 51995097 - 51995209
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||| |||||||| || |||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||  ||||||  |||||| | |||||||||    
T  51995097 ttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaactattttcgagttg 51995196  T
Q  118 tatcggttcattg 130  Q
      |||||||||||    
T  51995197 gttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 9469798 - 9469917
Alignment:
Q  20 aacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgta 119  Q
    |||||||||||| || |||||||||| ||||| ||||| |||||||||||||||||   || ||||  || ||||| || |||||| |||||||||||      
T  9469798 aacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatagaccaattgtcgagtcgaattacgaactatattcgagttggt 9469897  T
Q  120 tcggttcattgtcagcccta 139  Q
    ||||||||||||||||||||    
T  9469898 tcggttcattgtcagcccta 9469917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36543799 - 36543921
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||| ||||  ||||| ||||||||||||||||| | || ||||  || ||||| || |||||| ||||||||||    
T  36543799 attaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcgaattacgaactatattcgagtt 36543898  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  || |||||||||||||||||    
T  36543899 ggttcagttcattgtcagcccta 36543921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 22184522 - 22184643
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||  |||||  ||  |||||| || |||| |  ||||||||    
T  22184522 ttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttg 22184621  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| ||||||||    
T  22184622 gttcggttcattgccagcccta 22184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 36156412 - 36156300
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||||||  ||||  ||  |||| || ||||||||| ||||||||  |    
T  36156412 acgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggtt 36156313  T
Q  121 cggttcattgtca 133  Q
    |||||||||||||    
T  36156312 cggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 48731295 - 48731172
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| |||||||||||||| | |  ||||| ||||||||||| ||||| | || ||||  || ||||| || |||||| ||||||||||    
T  48731295 attaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatttcgaactatattcgagtt 48731196  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  48731195 ggttcggttcattggcagccctac 48731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 80519 - 80637
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    |||| |||||| || | |||||||||| ||| ||||| |||||||||||||||||||||  ||||||||  || | || |||||| | ||||||||| ||    
T  80519 acgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcgaactattttcgagttggat 80618  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| ||||||||    
T  80619 cggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 55892103 - 55891985
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || | | || ||||| ||||||||| ||||||||||||||||||||| |||||||||  ||||||  |||||| | || ||||||  |    
T  55892103 acgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttggtt 55892004  T
Q  121 cggttcattgtcagcccta 139  Q
    | |||||||||||||||||    
T  55892003 cagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 56224163 - 56224285
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||| ||||| || |||||||||||||||| ||||| | || |||||||||||||||| |||||   | ||| |||| |||||| | || |||||    
T  56224163 attaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttgagtcaagtttcgaactatgtttgagtt 56224262  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||||||||||||    
T  56224263 ggttcggttcattgtcagcccta 56224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 51408067 - 51407946
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || | | || ||||| ||| ||||| |||||||||||||| |||||| |||||||||  ||||||  |||||| | |||||||||  |    
T  51408067 acgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagtctcgaactattttcgagttggtt 51407968  T
Q  121 cggttcattgtcagccctactt 142  Q
    | ||||||||||||||||||||    
T  51407967 cagttcattgtcagccctactt 51407946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 13761824 - 13761940
Alignment:
Q  24 aacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcgg 123  Q
    |||||||| || ||||||| ||| |||| ||||| ||||||||||||| ||||||  |||||  ||  |||||||||||||||| ||||| |||| || |    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacgagttaattgtcgaatcgagttccgaactttgttcgaattgtctcag 13761923  T
Q  124 ttcattgtcagccctac 140  Q
    | |||||||||||||||    
T  13761924 tccattgtcagccctac 13761940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 28265763 - 28265671
Alignment:
Q  49 ctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccctact 141  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||  |||||| | |||||||||  || |||||||| ||||||||||    
T  28265763 ctcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagccctact 28265671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 49405735 - 49405635
Alignment:
Q  39 tcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccct 138  Q
    ||||||||| ||| ||||| |||| ||||||||||||||||  ||||||||  ||||||| |||||| | |||| ||||  |||||||||||||||||||    
T  49405735 tcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagccct 49405636  T
Q  139 a 139  Q
    |    
T  49405635 a 49405635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 12789674 - 12789552
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||||| ||||||| || |||| |||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  12789674 attaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 12789575  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  12789574 ggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 21441599 - 21441721
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  21441599 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 21441698  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  |||||||||||||| |||||    
T  21441699 ggttcggttcattgtcaacccta 21441721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 30938271 - 30938193
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagtta 226  Q
    ||||| |||||||| | ||||||||||| || || |||||||||||||||||||||||||||| |||||| ||| ||||    
T  30938271 tattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggtta 30938193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 53369890 - 53370012
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||| || || || || |  |||||| || |||||||    
T  53369890 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagtt 53369989  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  53369990 ggttcggttcattgccagcccta 53370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 52813620 - 52813680
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||||||||||||| || |||| |||||| |||||||||| ||||||||||||||||||||    
T  52813620 ttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacga 52813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 50147036 - 50146913
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || ||||||||| ||| || ||||| |||||||||||||||||||||  ||||  ||  |||| || ||||||||| |||| |||  |    
T  50147036 acgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggtt 50146937  T
Q  121 cggttcattgtcagccctacttga 144  Q
    ||||||||||  ||||||| ||||    
T  50146936 cggttcattgctagccctagttga 50146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 50606026 - 50606149
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||| ||    
T  50606026 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgaatt 50606125  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  50606126 ggttcggttcattgccagccctac 50606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 39509101 - 39509175
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    ||||||| ||||||||||||| || || |||||||||||||||||||||||| ||  |||||| ||| |||||||    
T  39509101 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaatt 39509175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 26632955 - 26633076
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||| ||||| | |||| |||||||||||||  |||||  ||  ||||||| |||||| |  ||||||||    
T  26632955 ttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagttacgaactattatcgagttg 26633054  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| | ||||||    
T  26633055 gttcggttcattgccggcccta 26633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 46944645 - 46944544
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||| ||| ||||| |||||||||||||||||||| | ||||| ||  |||| |  |||||| | || ||||||  ||||||||||||||||||    
T  46944645 ctcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagccc 46944546  T
Q  138 ta 139  Q
    ||    
T  46944545 ta 46944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 42644962 - 42644894
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    |||||| ||||||| || ||||||| ||||| |||| ||||||||||||||| || |||||||||||||    
T  42644962 tattgacttgggatctgagagtgtgttcttcctcaaagtctcaggttcgattatctccaatgctaattt 42644894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 6866221 - 6866170
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagtt 72  Q
    ||||||||||| || |||||||||||||||| ||||| ||||||||||||||    
T  6866221 acgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtt 6866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 19680833 - 19680786
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  19680833 ttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctc 19680786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 45674853 - 45674976
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||| ||||| || ||||||||| | ||||||| || ||||||||||||||| ||| | ||  || || ||||| |  |||||| || |||||||    
T  45674853 attaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcgagtcgaatgtcgaactataatcgagtt 45674952  T
Q  117 gtatcggttcattgtcagccctac 140  Q
    |  ||||||||||| |||||||||    
T  45674953 ggttcggttcattgccagccctac 45674976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 49576932 - 49576885
Alignment:
Q  162 ttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatg 209  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||    
T  49576932 ttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatg 49576885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 12821989 - 12822043
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgatt 199  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||||||| |||||||    
T  12821989 tgatattgacttgggatctgggagtgtgctcctgttcaaggtctcagattcgatt 12822043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 19852996 - 19853118
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| |  |||||| || ||||||||||||||||||| | ||| || || ||||| |  | |||| || |||||||    
T  19852996 attaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcaaactataatcgagtt 19853095  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||| ||||||| ||||||||    
T  19853096 ggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 32046722 - 32046664
Alignment:
Q  142 tgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||||||||  |||||||||||||| |||||| ||||| ||||||| ||||||||||    
T  32046722 tgatgatattggcttgggatttgggagagtgctcctcttcgaggtctcgggttcgattc 32046664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 8931137 - 8931068
Alignment:
Q  147 atattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    |||||||||||||| ||| |||||||||| || | ||||||||| ||||||||  |||| ||||||||||    
T  8931137 atattgatttgggacttgagagtgtgctcctcctgaaggtctcaagttcgatttcccccgatgctaattt 8931068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 28470873 - 28470953
Alignment:
Q  53 tttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcag 134  Q
    ||||| ||||||||||||||||||||| |||||||||  ||||||| || ||||| |||||||||  |  ||||||||||||    
T  28470873 tttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt-cgtacttttttcgagttggtttagttcattgtcag 28470953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 38869799 - 38869844
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||    
T  38869799 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 38869844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 40797849 - 40797970
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| ||||||||||||||||| |||| ||||| ||  || |||  |||||| | || ||||||    
T  40797849 ttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaagtatcgaactatttttgagttg 40797948  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| ||| ||||    
T  40797949 gttcggttcattgccagtccta 40797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 13455720 - 13455788
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    |||||||||||||| || |||||||||| | ||| ||||| |||| || ||||||||||||| ||||||    
T  13455720 ttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaatta 13455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 27891424 - 27891523
Alignment:
Q  36 agctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagc 135  Q
    ||||||||||| |||| ||||  ||||||||||||||||||||  |||||  ||  |||||||||||||| |  ||||||||  ||| ||||||||||||    
T  27891424 agctcaagttcagctcatttgt-tcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttgattcgattcattgtcagc 27891522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 32397816 - 32397704
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| ||||| ||||||||||||  ||||  |||||||||||||||  ||||  ||||  || ||||| || ||||||||| |||| |||  |    
T  32397816 acgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttcggcgaatcaattgtcgagtcgaattacgaactttaatcgaattggtt 32397717  T
Q  121 cggttcattgtca 133  Q
    ||||| |||||||    
T  32397716 cggtttattgtca 32397704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 44791365 - 44791305
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || || |||||| | ||||||| || |||||||||||||||||||    
T  44791365 attaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacg 44791305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 46295138 - 46295178
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  46295138 ggagtgtgctcctcctcaaggtctcaggttcgattctcccc 46295178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 49821000 - 49821060
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || |||| |||| | ||||||| || |||||||||||||||||||    
T  49821000 attaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacg 49821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 4249208 - 4249255
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||| ||||||||||| || ||||||||||||||| |||||||    
T  4249208 ttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctc 4249255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 4274662 - 4274555
Alignment:
Q  33 tttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtc 132  Q
    ||||||||||||||||||| ||||  ||||||| || |||||||||  |||||  ||  || |||| |||||| | |||||||||  |||||||||||      
T  4274662 tttagctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcattgct 4274563  T
Q  133 agccctac 140  Q
    ||||||||    
T  4274562 agccctac 4274555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 19455278 - 19455159
Alignment:
Q  19 taacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgt 118  Q
    |||| |||||||| || | ||||||||| |||| ||||  ||||||||||||||||||||| |||||  |   ||||||| |||||| | ||||| |       
T  19455278 taacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaatcgagtttcgaactattttcgaataag 19455179  T
Q  119 atcggttcattgtcagccct 138  Q
     |||||||||||||||||||    
T  19455178 ctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 23377995 - 23378034
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  23377995 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 23378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 37109388 - 37109349
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  37109388 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 37109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 48339217 - 48339162
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaac 76  Q
    ||||||||||| || |||||||||||| ||| ||||  ||||||||||||||||||    
T  48339217 acgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaac 48339162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 7539614 - 7539668
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||| |||| ||||||| ||||| |  |||||||||||||||||||||||    
T  7539614 tattgattttggatctgggagtatgctccttctcaaggtctcaggttcgattctc 7539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 19238622 - 19238572
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    |||||| |||||||||||||| || || ||||||| |||||||||||||||    
T  19238622 ttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctcccc 19238572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 31759703 - 31759657
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattct 201  Q
    |||||| |||||||||||||| || |||||||||||| |||||||||    
T  31759703 ttgggacttgggagtgtgctcctcctcaaggtctcagattcgattct 31759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 37274496 - 37274438
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    ||||||||||||| || ||||||||| ||||||||||||| |   ||||||||||||||    
T  37274496 tgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtg 37274438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 38791729 - 38791771
Alignment:
Q  36 agctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||    
T  38791729 agctcaagttcagctcatttggttcatgaaccaagttcaacga 38791771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 48151247 - 48151189
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaac 76  Q
    |||||||||||||| || ||||||||||| |||| ||||| |  |||||||||||||||    
T  48151247 ttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaac 48151189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 48977594 - 48977716
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||| ||||| || |||||| || | |||| || || |||||||| |||||||||||| ||| || || ||||| |  |||| | || |||||||    
T  48977594 attaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcgagtcgaatgtcgaattataatcgagtt 48977693  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  48977694 ggttcggttcattgccagcccta 48977716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 49262701 - 49262643
Alignment:
Q  183 aggtctcaggttcgattctccccaatgctaatttaagtgagttaa-ttagtttcttcaa 240  Q
    |||||||||||||||||||||||| ||| |||||| ||| | ||| |||||||||||||    
T  49262701 aggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttcaa 49262643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 7949489 - 7949452
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||| || |||||||||||||||||||||||    
T  7949489 ggagtgtgctcctcctcaaggtctcaggttcgattctc 7949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 8030249 - 8030204
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || ||||||||||| |||||||||    
T  8030249 ttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattc 8030204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 24008024 - 24007963
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    |||||||||||||| || | ||||||||   |||||| || |||||||||||||||||||||    
T  24008024 ttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaa 24007963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 25134593 - 25134646
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagt 71  Q
    |||||||||||||| || | |||||||||| ||| ||||| |||||||||||||    
T  25134593 ttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 31826640 - 31826685
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||||||| |||||||||| || ||||||||||| |||||||||    
T  31826640 ttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattc 31826685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 37980182 - 37980142
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccca 206  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  37980182 ggagtgtgctcctct-caaggtctcaggttcgattctcccca 37980142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 8325414 - 8325374
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| || ||||||||| ||||||||||||||||    
T  8325414 ggagtgtgctcatcctcaaggtcttaggttcgattctcccc 8325374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 12673129 - 12673089
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  12673129 ctcaagttcgactcatttggttcatgaaccaagttcaacga 12673089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 32992653 - 32992693
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| || ||||||||||| ||||||||||||||    
T  32992653 ggagtgtgctcctcctcaaggtctcaagttcgattctcccc 32992693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 40813373 - 40813289
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    |||||||| | |||||| ||||||||||||| | ||| | |||||||||||||| ||| ||  | | ||||||||||| ||||||    
T  40813373 tgatattggtctgggatctgggagtgtgctccttttcgaagtctcaggttcgatactctccggtaccaatttaagtgaattaatt 40813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 47044741 - 47044797
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    |||||| ||||||| || |||| ||||| || || ||||||||||||||||||||||    
T  47044741 tattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctccc 47044797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 43967529 - 43967653
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||| ||| |||||    
T  43967529 ttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacgaactaattactgagtcgagttccgaactttgttcaagttg 43967628  T
Q  118 tatcggttcattgtcagccctactt 142  Q
    ||||||||||||| |||||||||||    
T  43967629 tatcggttcattgccagccctactt 43967653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 34655054 - 34655175
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  34655054 ttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagtcgagttccgaactttattcgagttg 34655153  T
Q  118 tatcggttcattgtcagcccta 139  Q
    ||||||||||||| ||||||||    
T  34655154 tatcggttcattgccagcccta 34655175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 17865489 - 17865388
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  17865489 ctcaagttcggctcgtttggttcatgaaccaagttaaacgaactaattaccgagtcgagttccgaattttatttgagttgtctcggttcattgccagccc 17865390  T
Q  138 ta 139  Q
    ||    
T  17865389 ta 17865388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 3307953 - 3308075
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| ||  ||||||||||||||| ||||| |||||||| |||||| ||||  |||||  ||  |||||||||||||| |  ||||||||    
T  3307953 ttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagttccgaactattgtcgagttg 3308052  T
Q  118 tatcggttcattgtcagccctac 140  Q
      ||||||||||| |||||||||    
T  3308053 gttcggttcattgccagccctac 3308075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 33280095 - 33279977
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || ||||||  |||||||| ||||| ||||||||||||||| |||||  ||||| ||  || | || ||||||||| ||||||||  |    
T  33280095 acgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaattacgaactttaatcgagttggtt 33279996  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||||||||||||    
T  33279995 cggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 453501 - 453623
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || | ||||||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  453501 attaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 453600  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  453601 ggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 9412625 - 9412524
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    ||||||||| |||| ||||| ||||||||||||||||||||  | |||  || |||||| ||| |||| || ||||||||  ||||||||||| ||||||    
T  9412625 ctcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcgagtcgagctccaaactataatcgagttggttcggttcattgccagccc 9412526  T
Q  138 ta 139  Q
    ||    
T  9412525 ta 9412524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 11161590 - 11161650
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||||||||||||||||||    
T  11161590 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 11161650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 27189200 - 27189092
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||||| ||| ||||| ||||||||||||||| |||||  ||||| ||  || | || |||||| || ||||||||  |    
T  27189200 acgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatctaattacgaactctaatcgagttgatt 27189101  T
Q  121 cggttcatt 129  Q
    |||||||||    
T  27189100 cggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 3624619 - 3624658
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  3624619 tgggagtgtgctcctcttcaaggtctcaggttcgattctc 3624658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 36205213 - 36205276
Alignment:
Q  142 tgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||| ||||| |||| ||| ||||||||||||| || ||||||||||| ||||||||||||||    
T  36205213 tgatgttattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctcccc 36205276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 3058101 - 3058047
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||| ||||||  |||||||||||||| ||| ||||||||||||||||||||||    
T  3058101 tattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctc 3058047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 23361701 - 23361647
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||| ||||||||||||| || |||||||||||||||| ||||||    
T  23361701 tattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctc 23361647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 39478090 - 39478192
Alignment:
Q  39 tcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccct 138  Q
    ||||||||  ||| ||||| ||||||||||||| ||| |||| ||||| ||  ||||||  |||||| | |||||||||  ||||||||||| |||||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccct 39478189  T
Q  139 act 141  Q
    |||    
T  39478190 act 39478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 1091749 - 1091814
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    ||||||||||| || | |||| ||||| ||||||||| ||||||| ||||||||||||| ||||||    
T  1091749 acgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaatta 1091814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 9135971 - 9136096
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||| |||||||  || ||||||||||| |||  ||||  |||| |||||||||||||||  |||||  || |||||||||  |||| | || ||||||    
T  9135971 ttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcgagtcgagttctaaactatttttgagttg 9136070  T
Q  118 tatcggttcattgtcagccctacttg 143  Q
    | || ||||||| |||||||||||||    
T  9136071 tctcagttcattttcagccctacttg 9136096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 11819807 - 11819852
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  11819807 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattc 11819852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 27750761 - 27750806
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  27750761 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattc 27750806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 43384830 - 43384925
Alignment:
Q  35 tagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattg 130  Q
    ||||||||||||  ||| ||||| ||||||||||| ||||||||| |||||| ||  |||| |  |||||| | |||||||||  |||||||||||    
T  43384830 tagctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 43384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 968401 - 968455
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    ||||||||||||| || || |||||||||||||||||||| || |||| ||||||    
T  968401 tgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaattta 968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 19703521 - 19703483
Alignment:
Q  166 gagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    |||||||||| || |||||||||||||||||||||||||    
T  19703521 gagtgtgctcctcctcaaggtctcaggttcgattctccc 19703483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 23181177 - 23181235
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    ||||||||||| || || ||||||||||||| ||||| ||||||||||| ||| |||||    
T  23181177 acgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcgacgaa 23181235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 28787529 - 28787479
Alignment:
Q  167 agtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattta 217  Q
    ||||||||| || ||||||||||||||| ||||||||||| ||| ||||||    
T  28787529 agtgtgctcctcctcaaggtctcaggtttgattctccccagtgccaattta 28787479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 34516160 - 34516214
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaa 75  Q
    ||||||||||| || |||||||||||||||| ||||| | ||||| |||||||||    
T  34516160 acgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaa 34516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 13129693 - 13129746
Alignment:
Q  149 attgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||| ||||||| ||||||||| |||| || ||||||| |||||||||||||||    
T  13129693 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctc 13129746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 30774788 - 30774707
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    ||||| |||||||| ||| |||||| || || || ||||||||| ||||||| || || |||| |||||||||||| |||||    
T  30774788 tattggtttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctccgatgccaatttaagtgagctaatt 30774707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 44780159 - 44780114
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || ||||||||||||||| |||||    
T  44780159 ttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattc 44780114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 16852379 - 16852419
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctcc 203  Q
    ||||||||||||| || || |||||||||||||||||||||    
T  16852379 tgggagtgtgctcctcctcgaggtctcaggttcgattctcc 16852419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 28492747 - 28492711
Alignment:
Q  53 tttgggtcatgaaccaagttcaacgaactaattaccg 89  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  28492747 tttggttcatgaaccaagtttaacgaactaattaccg 28492711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 28783099 - 28783139
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctcc 203  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  28783099 tgggagtgtgctcctcctcaaggtctcatgttcgattctcc 28783139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 29855451 - 29855404
Alignment:
Q  167 agtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatt 215  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||| ||||    
T  29855451 agtgtgctcctctt-aaggtctcaggttcgattctcgccaatgccaatt 29855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 4e-45; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 2647095 - 2646983
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  2647095 ttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttctgaactttatttgagttg 2646996  T
Q  118 tatcggttcattg 130  Q
    |||||||||||||    
T  2646995 tatcggttcattg 2646983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 18667770 - 18667891
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||| |||| ||||||||||| ||  |||||||||| |||||||||||||||||  || ||||||||| |||||||||||||||||||| ||||||    
T  18667770 ttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaaccaagttcaataaaataattaccgagtcgagttccgaactttatttgagttg 18667869  T
Q  118 tatcggttcattgtcagcccta 139  Q
    |||||||||||||  |||||||    
T  18667870 tatcggttcattgctagcccta 18667891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 44740604 - 44740486
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  |||||  ||  |||||| || |||| |  ||||||||    
T  44740604 ttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttg 44740505  T
Q  118 tatcggttcattgtcagcc 136  Q
      ||||||||||| |||||    
T  44740504 gttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 3409309 - 3409188
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| | || ||||| ||||||||||||||||||||  |||||  ||  ||||||| |||||| |  ||||||||    
T  3409309 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattgtcgagttg 3409210  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| ||||||||    
T  3409209 gttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 11027930 - 11028048
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||| |||||  ||||| ||  | || || |||||| || | ||||||  |    
T  11027930 acgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaattgaattacgaactctaattgagttggtt 11028029  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| ||||||||    
T  11028030 cggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 27634689 - 27634811
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||||||| |||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  27634689 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 27634788  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  27634789 ggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 41959161 - 41959283
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||| ||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  41959161 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 41959260  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||||||||||||    
T  41959261 gattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 24844783 - 24844670
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatc 121  Q
    |||| ||||| || ||||||||||| |||| ||||| ||||||||||||||||||||  ||||| |||  ||||||| |||||| |  ||||||||  ||    
T  24844783 cgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttcgaactattatcgagttggttc 24844684  T
Q  122 ggttcattgtcagc 135  Q
    || |||||||||||    
T  24844683 ggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 11007093 - 11006977
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| || ||||||||||||||||||  ||||| ||| ||||||  | |||| | |||||||||    
T  11007093 ttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcgagt--caaactattttcgagttg 11006996  T
Q  118 tatcggttcattgtcagcc 136  Q
      |||||||||||||||||    
T  11006995 gttcggttcattgtcagcc 11006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 27902551 - 27902437
Alignment:
Q  27 ttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttc 126  Q
    ||||| || ||||||||||||| || ||| | ||||||||||||||| |||||  ||||  ||  |||| || ||||||||| ||||||||  |||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  127 attgtcagccctact 141  Q
    | |||||||||||||    
T  27902451 aatgtcagccctact 27902437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 33831513 - 33831635
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||| ||||||| | ||  || || ||||| |  |||||| || |||||||    
T  33831513 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 33831612  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  33831613 ggttcggttcattgccagcccta 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36538674 - 36538796
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| |  |||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  36538674 attaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 36538773  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  | ||||||||||||||||||    
T  36538774 ggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 6859367 - 6859310
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||| ||| ||| ||||||||||||| ||||||| ||||||||||||||||||    
T  6859367 tgatattgacttgtgatatgggagtgtgctcctcttcaaagtctcaggttcgattctc 6859310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 30713178 - 30713295
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||  || |||||| ||||||||| ||||| ||||||||||||||| |||||  ||||| ||  |||| || |||||  || ||||||||  |    
T  30713178 acgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgagttggtt 30713277  T
Q  121 cggttcattgtcagccct 138  Q
    |||||||||| |||||||    
T  30713278 cggttcattgccagccct 30713295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 26436372 - 26436432
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || |||||| |||| ||||||| || |||||||||||||||||||    
T  26436372 attaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacg 26436432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 29503295 - 29503351
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    ||||| |||||||  ||||||||||||| || |||||||||||||||||||||||||    
T  29503295 tattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccc 29503351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 33164102 - 33164042
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||||||||||||||||||    
T  33164102 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacg 33164042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 39715016 - 39715074
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctcccca 206  Q
    |||||| ||||||  ||||||||||||| || || ||||||||||||||||||||||||    
T  39715016 tattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctcccca 39715074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 14780530 - 14780603
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    |||||| ||| |||||| || ||||||| | |||||||||||||||||||| |||||| |||| ||||| ||||    
T  14780530 tattgacttgagatttgagaatgtgctccttttcaaggtctcaggttcgatcctccccgatgccaatttgagtg 14780603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 23052568 - 23052519
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    |||||| |||||||||||||  || |||||||||||||||||||||||||    
T  23052568 ttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccc 23052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 40458940 - 40459061
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| || ||||||||||||||| ||| |||||  |  ||||||  | |||| | ||| |||||    
T  40458940 ttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcgagtatcaaactattttcaagttg 40459039  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||||||||    
T  40459040 gttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 17616286 - 17616346
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||| ||||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||    
T  17616286 ttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacga 17616346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 27244325 - 27244413
Alignment:
Q  141 ttgatgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    ||||| ||||||||||||||  ||||||| ||||| || || |||| | |||||||||||||  || || ||||||||||||| |||||    
T  27244325 ttgataatattgatttgggacctgggagtatgctcctcctcgaggtttaaggttcgattctcttcagtgttaatttaagtgagctaatt 27244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 27464672 - 27464572
Alignment:
Q  39 tcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccct 138  Q
    ||||||||| ||| ||||| ||||||||||| |||||| ||  ||||| ||  || |||  |||||| | |||||||||  |||||||||||||||||||    
T  27464672 tcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcgagttggttcggttcattgtcagccct 27464573  T
Q  139 a 139  Q
    |    
T  27464572 a 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 33839319 - 33839259
Alignment:
Q  142 tgatgatattga-tttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattct 201  Q
    |||||||||||| |||||||  ||||||||||||| || |||||||||||||||| |||||    
T  33839319 tgatgatattgactttgggacatgggagtgtgctcctcctcaaggtctcaggttcaattct 33839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 34064723 - 34064783
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacg 77  Q
    ||||||||||||||| || ||||||||| | ||||||| || |||||||| ||||||||||    
T  34064723 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacg 34064783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 9963779 - 9963838
Alignment:
Q  19 taacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    ||||||||||||| |||| || |||||| |||| ||||| ||||||||| ||||||||||    
T  9963779 taacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacga 9963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 33569896 - 33569837
Alignment:
Q  162 ttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    |||| |||||||||||| || |||||||||||||||||||| |   ||||||||||||||    
T  33569896 ttggaagtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaatttaagtg 33569837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 34116290 - 34116239
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttc 73  Q
    |||||||||| || |||||||||||||||| ||||| |||||||| ||||||    
T  34116290 cgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttc 34116239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 37480117 - 37480156
Alignment:
Q  166 gagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  37480117 gagtgtgctcctcctcaaggtctcaggttcgattctcccc 37480156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 38409686 - 38409631
Alignment:
Q  24 aacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    |||||||| || |||||||||||||||| ||||| ||||||||||| ||| |||||    
T  38409686 aacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcgacgaa 38409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 42327432 - 42327393
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  42327432 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 42327393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 7799080 - 7799014
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    |||||| |||||||||||||| || || || |||||| |||||||||| ||| ||| ||||||||||    
T  7799080 ttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagtg 7799014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 9776330 - 9776409
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    |||||| |||||||||||   ||||||| |||||||| |||||||||||||| || |  ||||||||||| ||| |||||||    
T  9776330 tattgacttgggatttgga--tgtgctcatcttcaagatctcaggttcgattatctctgatgctaatttaggtgggttaatt 9776409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 16918630 - 16918576
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||| |||||||| ||||||||||||| || ||||||||| ||||| |||||||    
T  16918630 tattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctc 16918576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 19322792 - 19322846
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||| |||||||  ||||||||||||| ||||||||||||| |||| |||||||    
T  19322792 tattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctc 19322846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 21195714 - 21195676
Alignment:
Q  162 ttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||||||||||| || |||||||||||||||||||||    
T  21195714 ttgggagtgtgctcctcctcaaggtctcaggttcgattc 21195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 17369035 - 17368994
Alignment:
Q  94 gagttccgaactttattcgagttgtatcggttcattgtcagc 135  Q
    |||||||||||| |||||||||||  ||||||||||||||||    
T  17369035 gagttccgaactatattcgagttggctcggttcattgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 6099553 - 6099514
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  6099553 ggagtgtgctcctct-caaggtctcaggttcgattctcccc 6099514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 17737676 - 17737620
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    ||||| |||| || |||||||||||||| || ||||||||||| |||||||| ||||    
T  17737676 tattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgattatccc 17737620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 26482134 - 26482189
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtg 221  Q
    ||||||||||| ||| ||||||||||||||||||||||| || ||| ||||| ||||    
T  26482134 ggagtgtgctcctct-caaggtctcaggttcgattctcctcagtgccaatttcagtg 26482189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 4e-39; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 5418697 - 5418819
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||   |||||||||||||||||||||||||||    
T  5418697 ttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattacttagtcgagttccgaactttattcgagttg 5418796  T
Q  118 tatcggttcattgtcagccctac 140  Q
    ||||| ||||||| || ||||||    
T  5418797 tatcgattcattgccaaccctac 5418819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 25253721 - 25253843
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||| |  | |||  || |||||||||| |||| |||||||||||    
T  25253721 ttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactatattcgagttg 25253820  T
Q  118 tatcggttcattgtcagccctac 140  Q
      ||||||||||| |||||||||    
T  25253821 gttcggttcattgccagccctac 25253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 39135372 - 39135494
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||| |||| ||||  || ||||| ||  ||||| ||||||||||    
T  39135372 attaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagtt 39135471  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  |||||| |||| ||||||||    
T  39135472 ggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 44574547 - 44574669
Alignment:
Q  20 aacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgta 119  Q
    ||||||||| || |||| ||||||||| |||| || || ||| |||| |||||||||||| ||||| ||| |||||| | |||||| ||||||||||||     
T  44574547 aacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaattgccgagtcgagcttcgaactatattcgagttgtc 44574646  T
Q  120 tcggttcattgtcagccctactt 142  Q
    ||||||||||| |||||||||||    
T  44574647 tcggttcattgccagccctactt 44574669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 39469653 - 39469528
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||||||||| ||||  ||||||||||||||||| | || ||||| ||  |||| || |||||| ||||||||||    
T  39469653 attaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaattacgaactatattcgagtt 39469554  T
Q  117 gtatcggttcattgtcagccctactt 142  Q
    |  || ||||||| ||||||||||||    
T  39469553 ggttcagttcattatcagccctactt 39469528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 52199448 - 52199569
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||||||| |||||  ||  |||||| || |||| |  ||||||||    
T  52199448 ttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtcccaaactattgtcgagttg 52199547  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||| ||||||||||||||||    
T  52199548 gttcgattcattgtcagcccta 52199569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 9505242 - 9505118
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || |||||||||||  ||| ||||| ||||||||||||||||||||  |||||  ||  |||||||||||||| |  ||||||||    
T  9505242 ttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttg 9505143  T
Q  118 tatcggttcattgtcagccctactt 142  Q
      ||||||||||| |||||||||||    
T  9505142 gttcggttcattgccagccctactt 9505118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 19560875 - 19560772
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    ||||||||| ||| |||| | ||||||||||||||||||||| |||||  || ||||| ||||||||| |||||||||||  ||||||||||| ||||||    
T  19560875 ctcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagccc 19560776  T
Q  138 tact 141  Q
    ||||    
T  19560775 tact 19560772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 33438849 - 33438730
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||||| ||| ||||| |||||||||||||||||||||  ||||  ||  |||| || | ||||||| ||||||||  |    
T  33438849 acgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaactttaatcgagttggtt 33438750  T
Q  121 cggttcattgtcagccctac 140  Q
    ||||||||||||||||||||    
T  33438749 cggttcattgtcagccctac 33438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 54393561 - 54393443
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtat 120  Q
    ||||||||||| || |||||||||||||||| ||||| | |||||||||||||||||||  ||||  ||  |||| || ||||||||| ||||||||  |    
T  54393561 acgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggtt 54393462  T
Q  121 cggttcattgtcagcccta 139  Q
    |||||||||| ||||||||    
T  54393461 cggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 32689187 - 32689309
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||  || || ||||| |  |||||| || |||||||    
T  32689187 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagtt 32689286  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||||||||||||    
T  32689287 ggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 46293335 - 46293213
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || |||||||||||||||| ||||| ||||||||||| |||||   || ||||  |  ||||| ||  ||||| ||||||||||    
T  46293335 attaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcgaattttgaactatattcgagtt 46293236  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||||||||||||    
T  46293235 gattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 28703449 - 28703402
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  28703449 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctc 28703402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 39253728 - 39253775
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  39253728 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctc 39253775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 52934831 - 52934918
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaact 105  Q
    |||||||||||||| ||  |||||||||| |||| ||||| ||||||||||||||||| ||  |||||| ||  ||||||||||||||    
T  52934831 ttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaact 52934918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 12710721 - 12710842
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| ||||||||||||||||||||   ||||| ||  |||| |  |||||| | |||||||||    
T  12710721 ttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttg 12710820  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||| ||||||||    
T  12710821 gttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 14339641 - 14339690
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||    
T  14339641 ttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccc 14339690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 41609906 - 41610018
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||||| | ||| || || ||||| |  |||||| || |||||||    
T  41609906 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtt 41610005  T
Q  117 gtatcggttcattg 130  Q
    |  |||||||||||    
T  41610006 g-gtcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 47454652 - 47454591
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagtta 226  Q
    ||||||||||| || || |||||||||||||||||||||||||||| |||||| ||| ||||    
T  47454652 ggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggtta 47454591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 47279449 - 47279389
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatt 215  Q
    ||||||| ||||||||||||| || | ||||||||| |||||||| |||||||||||||||    
T  47279449 ttgggatctgggagtgtgctcctccttaaggtctcatgttcgattttccccaatgctaatt 47279389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 30311337 - 30311384
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||    
T  30311337 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 30311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 37051349 - 37051292
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||||||| |||||||||| || || | || ||||||||||||||||||    
T  37051349 tgatattgatttgggatctgggagtgtgttcctccttaaagtctcaggttcgattctc 37051292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 40943580 - 40943701
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||| ||||||||||||| ||| |||| ||||| |   ||||||  |||||| | |||||||||    
T  40943580 ttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcgagtatcgaactattttcgagttg 40943679  T
Q  118 tatcggttcattgtcagcccta 139  Q
      |||||| |||| ||||||||    
T  40943680 gttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 47237007 - 47236966
Alignment:
Q  164 gggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  47237007 gggagtgtgctcctcttcaaggtctcatgttcgattctcccc 47236966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 2667893 - 2667937
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgatt 199  Q
    ||||||| |||||||||||||||| || |||||||||||||||||    
T  2667893 ttgggatctgggagtgtgctcttcctcgaggtctcaggttcgatt 2667937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 28687091 - 28687203
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||| ||  || ||| ||| |||||||||||||||||| | | |||||  | ||||||||||||||  ||||||| |||    
T  28687091 ttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaacaagcaaattattgagtcgagttccgaaccatattcgatttg 28687190  T
Q  118 tatcggttcattg 130  Q
      ||| |||||||    
T  28687191 gttcgcttcattg 28687203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 39942921 - 39942809
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| || ||||||||||| |||| ||  | ||||||||||||||||||  | ||||| |||  |||| || |||||| || ||||||||    
T  39942921 ttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaatttcgaactatactcgagttg 39942822  T
Q  118 tatcggttcattg 130  Q
      || ||||||||    
T  39942821 gttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 49494186 - 49494142
Alignment:
Q  160 atttgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  49494186 atttgggagtgtgctcttcctcgaggtctcaggtttgattctccc 49494142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 34928959 - 34928912
Alignment:
Q  182 aaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    |||||||||| |||||||||| | |||||||||||||| |||||||||    
T  34928959 aaggtctcagattcgattctctctaatgctaatttaagagagttaatt 34928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 4844563 - 4844509
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||| ||||||||||||| || || |||||||||| |||||||||    
T  4844563 tattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctc 4844509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 4870259 - 4870205
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||| ||||||| ||||||||||||| || || |||||||||| |||||||||    
T  4870259 tattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctc 4870205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 44743900 - 44743826
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    ||||||| ||||||||||||| || || ||||||||||||||||| || ||| ||| |||||  ||| |||||||    
T  44743900 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatt 44743826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 8075172 - 8075127
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattc 200  Q
    |||||| |||||||||||||| || ||||||| |||||||||||||    
T  8075172 ttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattc 8075127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 14186688 - 14186725
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||| || |||||||||||||||||||||||    
T  14186688 ggagtgtgctcctcctcaaggtctcaggttcgattctc 14186725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 17108935 - 17108894
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctccc 204  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  17108935 tgggagtgtgctcctcctcaaggtctcaggtttgattctccc 17108894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 30662252 - 30662131
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    ||||||| |||||| || | |||||||||| ||| ||||  ||||||||||||||||||||   ||||| ||  |||| |  | |||| | |||||||||    
T  30662252 ttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttg 30662153  T
Q  118 tatcggttcattgtcagcccta 139  Q
      |||| |||||||||||||||    
T  30662152 gttcggctcattgtcagcccta 30662131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 37788500 - 37788463
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||| || |||||||||||||||||||||||    
T  37788500 ggagtgtgctcctcctcaaggtctcaggttcgattctc 37788463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 50965422 - 50965491
Alignment:
Q  18 ttaacgaacttaatcttt-agctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    |||||||||||||| ||| ||||||| ||| |||| || || ||||||||||| || |||||||||||||    
T  50965422 ttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacgaactaatta 50965491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 51068557 - 51068626
Alignment:
Q  18 ttaacgaacttaatcttt-agctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    |||||||||||||| ||| ||||||| ||| |||| || || ||||||||||| || |||||||||||||    
T  51068557 ttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacgaactaatta 51068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 15048106 - 15048062
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgatt 199  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||||    
T  15048106 ttgggatctgggaatgtgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 16900716 - 16900676
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| || ||||||||||| ||||||||||||||    
T  16900716 ggagtgtgctcctcgtcaaggtctcatgttcgattctcccc 16900676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 19716238 - 19716278
Alignment:
Q  165 ggagtgtgctcttcttcaaggtctcaggttcgattctcccc 205  Q
    ||||||||||| || |||||||||| |||||||||||||||    
T  19716238 ggagtgtgctcctcctcaaggtctctggttcgattctcccc 19716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 27093399 - 27093359
Alignment:
Q  162 ttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||||||||||||| || ||||||||||||||| |||||||    
T  27093399 ttgggagtgtgctcctcctcaaggtctcaggtttgattctc 27093359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 28242602 - 28242662
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacga 78  Q
    |||||||| ||||| || ||||||| ||| |||| ||||| ||||||||||| ||||||||    
T  28242602 ttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacga 28242662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 42430358 - 42430424
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaattt 216  Q
    |||||| ||||||| | ||||||||||| ||| |||||||| || |||||||||||||||||| |||||    
T  42430358 tattgacttgggatcttggagtgtgctcctct-caaggtcttag-ttcgattctccccaatgccaattt 42430424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 51766929 - 51766973
Alignment:
Q  158 ggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    |||| |||||||||||||||| ||||||| |||| ||||||||||    
T  51766929 ggatctgggagtgtgctcttcctcaaggtttcagattcgattctc 51766973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 21127 - 21227
Alignment:
Q  38 ctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagccc 137  Q
    |||||||||| ||| ||||| |||||||||||||||||||||  ||||| ||  ||||||  |||||| | |||||||||  ||||||||||||||||||    
T  21127 ctcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagccc 21225  T
Q  138 ta 139  Q
    ||    
T  21226 ta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 7425 - 7306
Alignment:
Q  22 cgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatc 121  Q
    |||||||||| || |||||||||||||||| ||||| ||||||||||||||| |||||  ||||| ||  |||| || |||||  || |||| |||  ||    
T  7425 cgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttc 7326  T
Q  122 ggttcattgtcagccctact 141  Q
    ||||||||| || |||||||    
T  7325 ggttcattgccacccctact 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 19314 - 19436
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || ||||||||| | ||||||| || ||||||||||||||||| | | ||  || || ||||| |  |||||| || |||||||    
T  19314 attaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcgagtcgaatgtcgaactataatcgagtt 19413  T
Q  117 gtatcggttcattgtcagcccta 139  Q
    |  ||||||||||| ||||||||    
T  19414 ggttcggttcattgccagcccta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 2522 - 2464
Alignment:
Q  148 tattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctcccca 206  Q
    ||||| ||| |||| ||||||||||||| || |||||||||||||||||||||||||||    
T  2522 tattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctcccca 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 14480 - 14566
Alignment:
Q  53 tttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttgtatcggttcattgtcagcccta 139  Q
    ||||| ||||||||||||||||| |||  ||||||||  ||||||| |||||| | |||| ||||  ||||||||||||||||||||    
T  14480 tttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 124603 - 124490
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    |||||| ||||||||  | |||||||||||| ||| ||||| ||||||||||||||||| | || ||||  || ||| | || |||||| ||||||||||    
T  124603 attaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaactatattcgagtt 124504  T
Q  117 gtatcggttcattg 130  Q
    |  |||||||||||    
T  124503 ggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 49337 - 49411
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagttaatt 229  Q
    |||||||||| |||||||||| ||||| |||| ||||||||||||||| ||  ||  |||||||||| |||||||    
T  49337 ttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatt 49411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 11409 - 11530
Alignment:
Q  18 ttaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagttg 117  Q
    |||||||||||||| |||| || ||||||  ||| ||||| |||||||| |||||| ||||  |||||  ||  ||||||||| |||| |  ||||||||    
T  11409 ttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactattatcgagttg 11508  T
Q  118 tatcggttcattgtcagcccta 139  Q
      ||||||||||||||| ||||    
T  11509 gttcggttcattgtcagtccta 11530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 81619 - 81538
Alignment:
Q  145 tgatattgatttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatgctaatttaagtgagtta 226  Q
    |||||||| ||||| || ||| ||||||||| || |||||||||||| ||||||||||||  |||| ||||| || ||||||    
T  81619 tgatattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctccctgatgccaatttgagggagtta 81538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 11559 - 11606
Alignment:
Q  155 ttgggatttgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||| ||||||||||||| || || ||||||||||||||||||||    
T  11559 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 11606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 26739 - 26684
Alignment:
Q  21 acgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaac 76  Q
    ||||||||||| || |||||||||||| ||| ||||  ||||||||||||||||||    
T  26739 acgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaac 26684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 13083 - 13044
Alignment:
Q  163 tgggagtgtgctcttcttcaaggtctcaggttcgattctc 202  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  13083 tgggagtgtgctcctcctcaaggtctcaggttcgattctc 13044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 306 - 244
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaa 79  Q
    |||||||||||||||  ||| |||||||||||||  || || ||||||||||||| |||||||    
T  306 attaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaa 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 10007 - 10120
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaattaccgggtcgagttccgaactttattcgagtt 116  Q
    ||||||||||||||| || | || ||||||||||| |||||  |||||| ||| ||||||||| |||||  || ||| | ||   |||| ||||||||||    
T  10007 attaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactatattcgagtt 10106  T
Q  117 gtatcggttcattg 130  Q
    |  |||||||||||    
T  10107 gattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 11487 - 11556
Alignment:
Q  17 attaacgaacttaatctttagctcaagttcggctcgtttgggtcatgaaccaagttcaacgaactaatta 86  Q
    ||||||||||||||| || | || ||||||||||| |||||   ||||| ||||||||||||| ||||||    
T  11487 attaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaatta 11556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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