View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16080_low_3 (Length: 468)
Name: NF16080_low_3
Description: NF16080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16080_low_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 394; Significance: 0; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 16 - 457
Target Start/End: Original strand, 4783834 - 4784275
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4783834 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttcatag |
4783933 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4783934 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctcctttggttcctgttcataaggattatgccgtgactatgggttctcaagg |
4784033 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatc |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4784034 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaacctatgcctacggtatatcgtgatgtcacgttgaatggaatt |
4784133 |
T |
|
| Q |
316 |
gagattttgaaaataagtgataaaaataatctctttggagtgaatccaaaacccatgtctttttctcccaaggaacaggttttaccaactcaacaatgga |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4784134 |
gagattttgaaaataagtgataaaaataatctctttggagtgaatccaaaacccatgtctttttctcccaaggaacaggttttaccaactcaacaatgga |
4784233 |
T |
|
| Q |
416 |
agaaatcaacnnnnnnnntccttgctgtggttgctgtttcat |
457 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |
|
|
| T |
4784234 |
agaaatcaacaacaaaaatccttgctgtggttgctgtttcat |
4784275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 16 - 457
Target Start/End: Original strand, 4816263 - 4816704
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4816263 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttcatag |
4816362 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4816363 |
atgatagtttggctgaactttttgctgatgtgatatggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcatgg |
4816462 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatc |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
4816463 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacatcgattaccaaaacctatgccttcggtatatcgtgatgtcacgttgaatggaatt |
4816562 |
T |
|
| Q |
316 |
gagattttgaaaataagtgataaaaataatctctttggagtgaatccaaaacccatgtctttttctcccaaggaacaggttttaccaactcaacaatgga |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4816563 |
gagattttgaaaataagtgataaaaataatctctttggagtgaatccaaaacccatgtctttttctcccaaggaacaggttttaccaactcaacaatgga |
4816662 |
T |
|
| Q |
416 |
agaaatcaacnnnnnnnntccttgctgtggttgctgtttcat |
457 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |
|
|
| T |
4816663 |
agaaatcaacaacaaaaatccttgctgtggttgctgtttcat |
4816704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 4636953 - 4636631
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||| |
|
|
| T |
4636953 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaactataaaggtgatagagtctttcagatattcatag |
4636854 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
|| | | ||||| |||| | || ||||||||| ||||||||||||||| | | |||||||||||||||||||||| || |||||| | || |
|
|
| T |
4636853 |
ataacactttggttgaagaaaaggcggatgtgatagggtggagtggtgctcgtatggttcctgttcataaggattatgttgtttctatgg------aggg |
4636760 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatc |
315 |
Q |
| |
|
|| |||||||||||||| |||| ||||||| |||||||| |||||||||||| || | |||||||| || ||||||||||| | | ||||||||| |
|
|
| T |
4636759 |
attaatctctcaaattgaaagagtttatctttcaatcaagcttcaacgattaccacaacccatgcctacagtatatcgtgatgttattcttaatggaatc |
4636660 |
T |
|
| Q |
316 |
gagattttgaaaataagtgataaaaataa |
344 |
Q |
| |
|
|||||||| ||||| ||||||||| |||| |
|
|
| T |
4636659 |
gagattttcaaaattagtgataaatataa |
4636631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 16 - 369
Target Start/End: Complemental strand, 4864018 - 4863662
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| | | | | ||||||||| |||||||||||||||| |
|
|
| T |
4864018 |
gaagttgattctaattttacttatatggtaaggttacatttttgtgagtttgatccgaatataacaaataaaggtgatagagcctttcagattttcatag |
4863919 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
| ||||| ||||||| | |||||||||||| ||||||| ||| ||| | | ||||||||||||||||||||| | ||| |||| ||| ||| |
|
|
| T |
4863918 |
ttaatagtatggctgaggaaaacgctgatgtgatacggtggagcggttctcgtatggttcctgttcataaggattatactgtgtctataaactctgaaga |
4863819 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatc |
315 |
Q |
| |
|
||||||||||||||||||| |||||| |||||| ||||| |||||| ||||||||| | ||| ||| || |||||||| ||||||||||||||| |
|
|
| T |
4863818 |
aggaagctctcaaattgaaagagttaacctttcgctcaagttacaacaattaccaaagaccatgtttacaaaataccgtgatgttacgttgaatggaatc |
4863719 |
T |
|
| Q |
316 |
gagattttgaaaataagtgataaaaa---taatctctttggagtgaatccaaaaccc |
369 |
Q |
| |
|
|||||||| |||||||| |||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
4863718 |
gagatttttaaaataagcgataaaaataataatttctttggactgaatccaaaaccc |
4863662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 4643764 - 4643521
Alignment:
| Q |
19 |
gttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatg |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||| | |||| | | | | ||||||||| |||||||| ||||||||| |
|
|
| T |
4643764 |
gttgattctggttttacttatatggtaaggttacatttttgtgagtttgatccggatataacaaataaaggtgatagagtctttcagatattcatagata |
4643665 |
T |
|
| Q |
119 |
atagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcgg |
218 |
Q |
| |
|
| | ||||| |||| | || ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| || |||||| | ||||| || |
|
|
| T |
4643664 |
acactttggttgaagaaaaggcggatgtgatagggtggagtggtgctcgtttggttcctgttcataaggattatgcaatgtctatggactatcaagaagg |
4643565 |
T |
|
| Q |
219 |
aagctctcaaattgaaaaagttaatctttcgatcaagctacaac |
262 |
Q |
| |
|
|||||||||| |||||| || ||||||||| |||||||| |||| |
|
|
| T |
4643564 |
aagctctcaacttgaaagagctaatctttcaatcaagcttcaac |
4643521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 347
Target Start/End: Complemental strand, 4631023 - 4630692
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||||||||||||| | || | | | | ||||||||| |||||||||||||||| |
|
|
| T |
4631023 |
gaagttgattcttcttttacttatatggtaagattacatttttgtgagtttgaaatgacgataagagatcaaggtgatagagtctttcagattttcatag |
4630924 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
| | | | | ||||| | |||||||||||||||||||||||||||| | | |||||| |||||||||||||| ||| |||| ||||||| |
|
|
| T |
4630923 |
ctaacattctagctgaggaaaaagctgatgtgataaggtggagtggtgctcgtatggttcctactcataaggattatgttgtgcttatgtactctcaaga |
4630824 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatc |
315 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||||| | |||| |||| || |||| | || | |||||||||||| | |||||||||| |
|
|
| T |
4630823 |
aggaagctctcaaattgaaagagttaatctttcaatcaagcttcgacgagcaccagaaactatacacacaatatatcgtgatgtcctgctgaatggaatt |
4630724 |
T |
|
| Q |
316 |
gagattttgaaaataagtgataaaaataatct |
347 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| |
|
|
| T |
4630723 |
gagattttcaaaataagtgataaaactaatct |
4630692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 270
Target Start/End: Complemental strand, 4667033 - 4666777
Alignment:
| Q |
17 |
aagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcataga |
116 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||| |
|
|
| T |
4667033 |
aagttgattctatttttacttatatggtaaggttgcatttttgtgagtttgattggcatatcaagaatccaggtgatagagtttttcagatttttataga |
4666934 |
T |
|
| Q |
117 |
tgatagtttggctgaacatgctgctgatgtgataaggtggagt---ggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaa |
213 |
Q |
| |
|
||||| | ||||||||| ||||| ||| | |||||| |||| || | | |||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
4666933 |
tgatattatggctgaaccaagggctgacgtgctttattggagtagtggtgttcgtatggttcctgttcataaggattatgccttgactatggattctcaa |
4666834 |
T |
|
| Q |
214 |
ggcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattacca |
270 |
Q |
| |
|
|| || ||| ||||||||||| |||||||||||| || ||||| |||||| ||||| |
|
|
| T |
4666833 |
ggagggagccgtcaaattgaaagagttaatctttcaattaagcttcaacgagtacca |
4666777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 4672769 - 4672526
Alignment:
| Q |
19 |
gttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatg |
118 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| ||||||||||| |||| | |
|
|
| T |
4672769 |
gttgattcttctttcacttatatggtaaggttacatttttgtgagtttgacaggcttatcattaatacaggtgatagagcctttcagatttttatagcta |
4672670 |
T |
|
| Q |
119 |
atagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcgg |
218 |
Q |
| |
|
| | | ||||||| | |||||||| ||||| ||||||||||||| | | ||||||||||||||||||||||| || |||||| ||||||| || |
|
|
| T |
4672669 |
acactctggctgaggaaagagctgatgttataagttggagtggtgctcgtatggttcctgttcataaggattatgctgtcactatgtactctcaagaagg |
4672570 |
T |
|
| Q |
219 |
aagctctcaaattgaaaaagttaatctttcgatcaagctacaac |
262 |
Q |
| |
|
||||||||||||||||| |||||||||||| || ||||| |||| |
|
|
| T |
4672569 |
aagctctcaaattgaaagagttaatctttctattaagcttcaac |
4672526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 4697189 - 4697543
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| ||||| || ||||||| |
|
|
| T |
4697189 |
gaagttgatgttggttttacttatatggtaaggttgcatttttgtgagtttgatcagcatatcaaaaatataggtgatagagtctttcaaatattcatag |
4697288 |
T |
|
| Q |
116 |
atgatagtttggctga-acatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaag |
214 |
Q |
| |
|
| ||| |||||| || | | | ||||||||||| |||||| | ||||| | |||||||||||||| |||||||| ||| ||||| ||||||| |
|
|
| T |
4697289 |
ctaatactttggcggagataaac-gctgatgtgatttcttggagtactactcctatggttcctgttcataaagattatgctgtgtctatgcactctcaag |
4697387 |
T |
|
| Q |
215 |
gcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaat |
314 |
Q |
| |
|
||||||||||||||||||| | |||||||||| ||||||||||||||| |||| | ||| || || |||||||||| |||||||| || |
|
|
| T |
4697388 |
aaggaagctctcaaattgaaagacttaatctttcaatcaagctacaacgagcaccaggacgtatcttcacaagatacggtgatgtcacattgaatggcat |
4697487 |
T |
|
| Q |
315 |
cgagattttgaaaataagtgataaaa---ataatctctttggagtgaatccaaaac |
367 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||| |||||||||| |
|
|
| T |
4697488 |
cgagattttgaaaataaatgataaaaatgataatctctttggatcaaatccaaaac |
4697543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 4712075 - 4712406
Alignment:
| Q |
17 |
aagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcataga |
116 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||| | | ||||||||| |||||||| || || | |
|
|
| T |
4712075 |
aagttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttatcaagaataaaggtgatagagtttttcagatatttatcaa |
4712174 |
T |
|
| Q |
117 |
tgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggc |
216 |
Q |
| |
|
||||| |||||||||||| ||||||||||| |||||||||| | | |||||||||||||||||||||| |||| ||| |||||| |
|
|
| T |
4712175 |
tgatattttggctgaacaatacgctgatgtgatttactggagtggtggtaacatgattcctgttcataaggattatgctgtgaaaatgtactctcaaaat |
4712274 |
T |
|
| Q |
217 |
ggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatcg |
316 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||| || ||||| |||||| |||| || ||| || || |||||||||| |||||||||| | |
|
|
| T |
4712275 |
ggaagctctgaaattgaaagagttaacctttcaattaagcttcaacgagaaccagaaagtatctacacaaattaccgtgatgtcataatgaatggaattg |
4712374 |
T |
|
| Q |
317 |
agattttgaaaataagtgataaaaataatctc |
348 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |
|
|
| T |
4712375 |
agattttcaaaataagtgataaaaataatctc |
4712406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 270
Target Start/End: Original strand, 4846014 - 4846268
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||| | | ||||||||| |||||||| || || |
|
|
| T |
4846014 |
gaagttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttaccaagaataaaggtgatagagtttttcagatatttatca |
4846113 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
|||||| ||||||||||| |||||||||||| |||||||||| | | |||||||||||||||||||||| |||| || |||||| |
|
|
| T |
4846114 |
atgatattttggctgaactatatgctgatgtgattttttggagtggtggtaacatgattcctgttcataaggattatgctgtgaaaatctactctcaaaa |
4846213 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattacca |
270 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| |
|
|
| T |
4846214 |
tggaagctctgaaattgaaagagttaatctttcaatcaagcttcaacgattacca |
4846268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 4663084 - 4662899
Alignment:
| Q |
19 |
gttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatg |
118 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||||||||||||| | |||||| | | | |||||||||| ||||||||||| ||||||| |
|
|
| T |
4663084 |
gttgattcttcttttacatacatggtaaggttacatttttgtgagtttgatccgaatatcataaataaaggtgatagaatgtttcagatttttatagatg |
4662985 |
T |
|
| Q |
119 |
atagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatg |
204 |
Q |
| |
|
||| ||| | |||| | || |||||||||||||||||| || || | | |||||||||||||||||||||| ||||||||| |
|
|
| T |
4662984 |
ataatttagttgaagaattagccgatgtgataaggtggagtaatggtcgtatggttcctgttcataaggattatggtgtgactatg |
4662899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 260
Target Start/End: Complemental strand, 4653601 - 4653372
Alignment:
| Q |
31 |
tttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatagatgatagtttggctg |
130 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||| |||||| | | ||||||||| || ||||| || ||| ||||| ||||||| |
|
|
| T |
4653601 |
tttacttatatggtcaggttacatttttgtgaatttgattggcgtatcaaggataaaggtgatagagttttccagatatttatacatgatttcttggctg |
4653502 |
T |
|
| Q |
131 |
aacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaaggcggaagctctcaaat |
230 |
Q |
| |
|
||| |||||||||||| ||||| ||||| ||| ||||||||||||||||||||| ||||||||| ||| ||| |||||| ||||||| |
|
|
| T |
4653501 |
aaccaaatgctgatgtgatttcatggagcaatgctcgtttgattcctgttcataaggattatgttgtgactatgcactctgaagaaggaagcactcaaat |
4653402 |
T |
|
| Q |
231 |
tgaaaaagttaatctttcgatcaagctaca |
260 |
Q |
| |
|
||||| |||||||||| | ||||||||||| |
|
|
| T |
4653401 |
tgaaagagttaatcttacaatcaagctaca |
4653372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 4647620 - 4647489
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| || | ||||||| | ||||| || || |||| |
|
|
| T |
4647620 |
gaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaattcaggtgatacagtttttcatatgtttatag |
4647523 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgat |
149 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||| |
|
|
| T |
4647522 |
atgatattttggctgaacattatgctgatgtgat |
4647489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 4672495 - 4672443
Alignment:
| Q |
293 |
gtgatgtcacgttgaatggaatcgagattttgaaaataagtgataaaaataat |
345 |
Q |
| |
|
|||||||||| || ||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
4672495 |
gtgatgtcacattaaatggaatcgagattttcaaagtaagtgataaaaataat |
4672443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 4643494 - 4643454
Alignment:
| Q |
304 |
ttgaatggaatcgagattttgaaaataagtgataaaaataa |
344 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
4643494 |
ttgaatggaatcgagattttaaaaataagtgacaaaaataa |
4643454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 4647437 - 4647378
Alignment:
| Q |
208 |
tctcaaggcggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgatta |
267 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
4647437 |
tctcaaggaggaaggaatcaaattgaaagagttaatctttcaatcaagcttcaacgatta |
4647378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 4846299 - 4846342
Alignment:
| Q |
304 |
ttgaatggaatcgagattttgaaaataagtgataaaaataatct |
347 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||| ||||| |
|
|
| T |
4846299 |
ttgaatggaatcgagattttcaaagtaagtgataaaaacaatct |
4846342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 4666740 - 4666703
Alignment:
| Q |
307 |
aatggaatcgagattttgaaaataagtgataaaaataa |
344 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
4666740 |
aatggaatcgagattttaaaaataagtgacaaaaataa |
4666703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 4661688 - 4661636
Alignment:
| Q |
222 |
ctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaat |
274 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||| |||| |||| |||||| |
|
|
| T |
4661688 |
ctctcaaattgaaagagttgatctttcaatcaagcttcaaccattatcaaaat |
4661636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 344
Target Start/End: Original strand, 18925741 - 18926069
Alignment:
| Q |
16 |
gaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaagatttcagattttcatag |
115 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| || |||||||| ||||||||||||||||| || | | ||||||||| ||||||||||| |||| |
|
|
| T |
18925741 |
gaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttttatag |
18925840 |
T |
|
| Q |
116 |
atgatagtttggctgaacatgctgctgatgtgataaggtggagtggtgctccttttgttcctgttcataaggattatgccgtgactatgggttctcaagg |
215 |
Q |
| |
|
|||||| ||||||||||| |||||||||||| ||||||||||||| | | |||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
18925841 |
atgataatttggctgaacgaaatgctgatgtgattcattggagtggtgctcgtatggttcctgttcataaggattatgttgtgactatgtactctcgaga |
18925940 |
T |
|
| Q |
216 |
cggaagctctcaaattgaaaaagttaatctttcgatcaagctacaacgattaccaaaatctatgcctacggtgtatcgtgatgtcacgttgaatggaatc |
315 |
Q |
| |
|
|||||||| |||||| ||| |||||||||||| || |||||||||||| |||| || ||| | || ||| ||||||| |||||||| ||| |
|
|
| T |
18925941 |
aggaagctcgcaaattaaaagagttaatctttcaataaagctacaacgagcaccagaaaatatctactcaaaataccgtaatgtcacattgaatgggatc |
18926040 |
T |
|
| Q |
316 |
gagattttgaaaataagtgataaaaataa |
344 |
Q |
| |
|
|||||||||||||||||||| |||||||| |
|
|
| T |
18926041 |
gagattttgaaaataagtgacaaaaataa |
18926069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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