View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16087_high_12 (Length: 226)
Name: NF16087_high_12
Description: NF16087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16087_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 40150605 - 40150408
Alignment:
| Q |
12 |
gcataggaatattcatacttctgctgtcatgggagttgctggtgttcagcacaaggaaattgtgctgtctgttggtcaagacaagagaattttggggtac |
111 |
Q |
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| T |
40150605 |
gcataggaatattcatacttctgctgtcatgggagttgctggtgttcagcacaagaaaattgtgctgtctgttggtcaagacaagagaattttggggtac |
40150506 |
T |
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| Q |
112 |
aatgctcacgtgggaagacaagatttcatacatcaagttgatagtaaatgcttgagtatattgccaaatccagttgacttcaatttgttcatggttca |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40150505 |
aatgctcacgtgggaagacaagatttcatacatcaagttgatagtaaatgcttgagtatattgccaaatccagttgacttcaatttgttcatggttca |
40150408 |
T |
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