View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16087_high_14 (Length: 217)
Name: NF16087_high_14
Description: NF16087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16087_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 44857485 - 44857670
Alignment:
| Q |
18 |
agaatcacaatcatcatattatatcaaacacatcatgaccaaatcatagtataccataatcttattatactattattaagatagaaggacatttacttct |
117 |
Q |
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| T |
44857485 |
agaatcacaatcatcatattatatcaaacacatcatgaccaaatcatagtataccataatcttattatactattattaagatagaaggacatttacttct |
44857584 |
T |
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| Q |
118 |
taccatagctatttggatccgcaataatctcactgaaaactttgtaagtgtcaccatatacaaaaattgaatctgcgtgctctgtg |
203 |
Q |
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| T |
44857585 |
taccatagctatttggatccgcaataatctcactgaaaactttgtaagtgtcaccatatacaaaaattgaatctgcgtgctctgtg |
44857670 |
T |
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