View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1608_high_10 (Length: 283)
Name: NF1608_high_10
Description: NF1608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1608_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 6 - 266
Target Start/End: Original strand, 44693965 - 44694225
Alignment:
| Q |
6 |
ttatatcaatttaactatctgtttagttcaaagattccataaccatattcatataatctttaaaaacaatggatactttgtgtttattacaaagtgggat |
105 |
Q |
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| T |
44693965 |
ttatatcaatttaactatctgtttagttcaaagattccataaccatattcatacaatctttaaaaacaatggttactttgtgtttattacaaagtgggat |
44694064 |
T |
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| Q |
106 |
tcctggtatagttcctttaatcacttctattactgcaaccactactacttcacgtgccaatgatcacgttcacgtgcatcaatctcacgtaaccacagtg |
205 |
Q |
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|||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44694065 |
tcctggtatagttcctttaatcacttctattagtgcaactactactacttcacgtgccaatgatcacgttcacgtgcatcaatctcacgtaaccacagtg |
44694164 |
T |
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| Q |
206 |
aggcgatcaaacaagtcctccatgttttccagattcataggtagctccgccagaaacaatt |
266 |
Q |
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| T |
44694165 |
aggcgatcaaacaagtcctccatgttttccagattcataggtagctccgccagaaacaatt |
44694225 |
T |
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