View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1608_high_12 (Length: 251)
Name: NF1608_high_12
Description: NF1608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1608_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39120675 - 39120438
Alignment:
| Q |
1 |
tagttgcaagagattctgacgaattaggaaccattgtttcttcttctttaaccatatcccctgagcaaaagcacttcattatcttctgcaatctcttccc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39120675 |
tagttgcaagagattctgacgaattaggaaccattgtttcttcttctttaaccatatcccctgagcaaaagcacttcattatcttctgcaatctcttccc |
39120576 |
T |
|
| Q |
101 |
ccggtgcttatccctactccccatgcttgctctcttctctcaaaaacctctccaccacaccactgtcacattaaatcatcacagttaaaccacaatcata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39120575 |
ccggtgcttatccctactccccatgcttgctctcttctctcaaaaacctctccaccacaccactgtcacattaaatcatcacagttaaaccacaatcata |
39120476 |
T |
|
| Q |
201 |
accataaacaagcaaccaatcaatagctatgaaacatg |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
39120475 |
accataaacaagcaaccaatcaatagctatgaaacatg |
39120438 |
T |
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