View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1609-INSERTION-4 (Length: 364)

Name: NF1609-INSERTION-4
Description: NF1609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1609-INSERTION-4
NF1609-INSERTION-4
[»] chr5 (61 HSPs)
chr5 (8-302)||(26177465-26177762)
chr5 (8-304)||(18441937-18442236)
chr5 (8-302)||(9789513-9789810)
chr5 (8-301)||(26170357-26170653)
chr5 (8-301)||(16407641-16407918)
chr5 (81-301)||(29719965-29720186)
chr5 (8-302)||(16409076-16409354)
chr5 (26-301)||(24136207-24136484)
chr5 (122-302)||(29722151-29722332)
chr5 (19-301)||(9352807-9353091)
chr5 (116-292)||(30631764-30631940)
chr5 (114-301)||(22536666-22536852)
chr5 (106-292)||(27450216-27450401)
chr5 (177-301)||(15465001-15465125)
chr5 (176-303)||(29752265-29752392)
chr5 (21-302)||(25077705-25077987)
chr5 (21-302)||(25135674-25135956)
chr5 (106-292)||(27445373-27445558)
chr5 (15-220)||(38219746-38219949)
chr5 (12-301)||(40379678-40379967)
chr5 (12-302)||(40381888-40382178)
chr5 (21-302)||(16546215-16546497)
chr5 (174-303)||(29751597-29751726)
chr5 (177-302)||(36931842-36931967)
chr5 (106-292)||(43599124-43599310)
chr5 (106-292)||(43604616-43604802)
chr5 (106-292)||(43610108-43610294)
chr5 (106-292)||(1456646-1456831)
chr5 (12-301)||(10592844-10593132)
chr5 (21-302)||(16543993-16544275)
chr5 (122-292)||(29402558-29402728)
chr5 (19-171)||(35388014-35388169)
chr5 (116-292)||(15045096-15045271)
chr5 (16-293)||(11916452-11916732)
chr5 (116-292)||(28807084-28807260)
chr5 (16-292)||(12083659-12083937)
chr5 (106-217)||(43592679-43592789)
chr5 (117-294)||(37556131-37556308)
chr5 (16-301)||(14520567-14520854)
chr5 (117-294)||(37560953-37561130)
chr5 (116-302)||(33768587-33768773)
chr5 (116-302)||(33791719-33791905)
chr5 (116-301)||(2785778-2785963)
chr5 (116-238)||(31180665-31180787)
chr5 (8-77)||(29722334-29722403)
chr5 (19-153)||(36931970-36932106)
chr5 (26-171)||(29751467-29751615)
chr5 (246-292)||(31180776-31180822)
chr5 (251-301)||(35388196-35388246)
chr5 (246-292)||(43592800-43592846)
chr5 (8-77)||(29720174-29720243)
chr5 (116-301)||(31396489-31396674)
chr5 (19-77)||(15464874-15464932)
chr5 (116-302)||(31401345-31401531)
chr5 (189-224)||(35388166-35388201)
chr5 (81-191)||(16650995-16651103)
chr5 (154-258)||(28751026-28751132)
chr5 (123-171)||(15464968-15465016)
chr5 (257-292)||(43625605-43625640)
chr5 (155-205)||(42428863-42428913)
chr5 (155-208)||(213014-213067)
[»] scaffold0491 (2 HSPs)
scaffold0491 (8-301)||(11458-11753)
scaffold0491 (8-302)||(9032-9309)
[»] chr4 (49 HSPs)
chr4 (8-301)||(31495606-31495902)
chr4 (21-302)||(13992596-13992880)
chr4 (82-301)||(28467977-28468196)
chr4 (21-292)||(24742296-24742569)
chr4 (12-293)||(7122274-7122556)
chr4 (16-301)||(31985127-31985394)
chr4 (108-302)||(7124488-7124681)
chr4 (16-301)||(5148015-5148302)
chr4 (106-292)||(9223907-9224092)
chr4 (106-292)||(9228694-9228879)
chr4 (106-292)||(51520857-51521042)
chr4 (12-302)||(5137874-5138165)
chr4 (12-301)||(5135649-5135939)
chr4 (106-292)||(56141519-56141705)
chr4 (116-292)||(5733062-5733239)
chr4 (116-301)||(8392982-8393166)
chr4 (12-302)||(8395190-8395479)
chr4 (116-292)||(3814422-3814597)
chr4 (16-292)||(16628354-16628632)
chr4 (81-238)||(29761041-29761196)
chr4 (116-292)||(45347325-45347501)
chr4 (116-292)||(18856125-18856301)
chr4 (120-260)||(18712295-18712435)
chr4 (16-292)||(6742897-6743175)
chr4 (83-292)||(3777956-3778164)
chr4 (16-192)||(8689078-8689256)
chr4 (16-201)||(5268772-5268960)
chr4 (16-292)||(16622775-16623053)
chr4 (225-292)||(18860446-18860513)
chr4 (16-238)||(5143597-5143823)
chr4 (16-183)||(36314821-36314990)
chr4 (16-183)||(36329030-36329199)
chr4 (241-302)||(5143807-5143868)
chr4 (240-292)||(8689045-8689097)
chr4 (246-289)||(29761185-29761228)
chr4 (246-292)||(38151919-38151965)
chr4 (116-237)||(45356861-45356982)
chr4 (81-205)||(5429353-5429475)
chr4 (155-258)||(2209122-2209225)
chr4 (249-292)||(5268700-5268743)
chr4 (19-77)||(28468222-28468283)
chr4 (81-183)||(5396281-5396382)
chr4 (246-292)||(10047935-10047981)
chr4 (155-208)||(54882492-54882545)
chr4 (246-292)||(54867748-54867794)
chr4 (146-183)||(10047834-10047871)
chr4 (81-201)||(25861605-25861724)
chr4 (155-212)||(26176069-26176126)
chr4 (155-191)||(5370521-5370557)
[»] chr2 (33 HSPs)
chr2 (16-304)||(32289145-32289436)
chr2 (21-301)||(6266274-6266557)
chr2 (8-301)||(4484627-4484923)
chr2 (21-302)||(30832920-30833204)
chr2 (16-301)||(25409978-25410266)
chr2 (19-301)||(3492092-3492377)
chr2 (20-302)||(40739173-40739458)
chr2 (21-301)||(12647686-12647967)
chr2 (27-292)||(9295870-9296137)
chr2 (20-292)||(14291843-14292117)
chr2 (106-292)||(11098395-11098581)
chr2 (15-238)||(28258713-28258938)
chr2 (120-292)||(39811485-39811657)
chr2 (16-292)||(33528106-33528384)
chr2 (16-206)||(34389188-34389380)
chr2 (223-292)||(44310479-44310548)
chr2 (209-292)||(32247262-32247344)
chr2 (16-292)||(23077953-23078231)
chr2 (15-292)||(10706734-10707013)
chr2 (81-292)||(39483282-39483492)
chr2 (116-302)||(19344825-19345011)
chr2 (87-200)||(17865589-17865701)
chr2 (85-205)||(2837221-2837339)
chr2 (16-292)||(8389632-8389909)
chr2 (116-301)||(19349683-19349868)
chr2 (84-292)||(20522631-20522837)
chr2 (246-301)||(28258669-28258724)
chr2 (241-292)||(36757426-36757477)
chr2 (246-292)||(21630514-21630560)
chr2 (16-75)||(14698710-14698769)
chr2 (155-266)||(29867491-29867602)
chr2 (16-77)||(36757461-36757522)
chr2 (155-238)||(45099393-45099477)
[»] chr3 (87 HSPs)
chr3 (8-302)||(23198234-23198531)
chr3 (8-302)||(23200433-23200730)
chr3 (21-301)||(800685-800968)
chr3 (21-302)||(7782450-7782713)
chr3 (82-302)||(1306385-1306605)
chr3 (19-301)||(33386137-33386421)
chr3 (12-301)||(27453290-27453581)
chr3 (81-301)||(26928080-26928300)
chr3 (19-301)||(37726015-37726299)
chr3 (28-292)||(8477729-8477994)
chr3 (16-302)||(37408035-37408322)
chr3 (12-292)||(40372264-40372546)
chr3 (19-238)||(32143662-32143884)
chr3 (114-301)||(6716085-6716271)
chr3 (116-301)||(54634710-54634894)
chr3 (12-302)||(10058026-10058317)
chr3 (12-302)||(10060248-10060539)
chr3 (12-302)||(10062470-10062761)
chr3 (12-302)||(10064692-10064983)
chr3 (12-302)||(10066914-10067205)
chr3 (12-293)||(10055812-10056095)
chr3 (21-301)||(25637013-25637294)
chr3 (21-302)||(4598825-4599108)
chr3 (21-302)||(3617033-3617315)
chr3 (21-301)||(4601046-4601328)
chr3 (106-292)||(7167688-7167874)
chr3 (116-292)||(22172670-22172846)
chr3 (116-292)||(18656844-18657021)
chr3 (81-289)||(27352092-27352298)
chr3 (81-238)||(27986001-27986157)
chr3 (120-292)||(28501160-28501332)
chr3 (120-292)||(28503327-28503499)
chr3 (21-302)||(10210977-10211260)
chr3 (106-254)||(2671111-2671259)
chr3 (81-301)||(10208778-10208996)
chr3 (16-238)||(27974477-27974701)
chr3 (16-292)||(36029430-36029708)
chr3 (114-238)||(6718331-6718455)
chr3 (15-301)||(27038387-27038666)
chr3 (12-238)||(45282628-45282854)
chr3 (97-238)||(8738585-8738726)
chr3 (97-238)||(9090823-9090964)
chr3 (81-292)||(21711607-21711817)
chr3 (15-288)||(27027042-27027318)
chr3 (16-292)||(30709267-30709546)
chr3 (16-302)||(39032016-39032304)
chr3 (87-288)||(40735018-40735218)
chr3 (116-294)||(2672425-2672603)
chr3 (81-288)||(40734087-40734293)
chr3 (16-208)||(16264686-16264880)
chr3 (116-294)||(2676581-2676759)
chr3 (246-301)||(32143873-32143928)
chr3 (15-208)||(8370044-8370239)
chr3 (83-292)||(35925898-35926105)
chr3 (246-302)||(6718287-6718342)
chr3 (246-301)||(27974433-27974488)
chr3 (246-301)||(45282585-45282639)
chr3 (19-77)||(1306300-1306358)
chr3 (19-77)||(26928288-26928346)
chr3 (16-292)||(48438552-48438831)
chr3 (249-292)||(8738550-8738593)
chr3 (249-292)||(9090788-9090831)
chr3 (246-292)||(16264899-16264945)
chr3 (116-192)||(24968520-24968596)
chr3 (81-205)||(29812736-29812858)
chr3 (116-192)||(32475887-32475963)
chr3 (116-192)||(32480745-32480821)
chr3 (81-208)||(47923457-47923584)
chr3 (16-120)||(5236761-5236869)
chr3 (246-301)||(27985957-27986012)
chr3 (8-47)||(27986175-27986214)
chr3 (250-292)||(1730917-1730959)
chr3 (226-292)||(32475997-32476063)
chr3 (226-292)||(32480855-32480921)
chr3 (116-288)||(8512643-8512815)
chr3 (17-183)||(40592362-40592530)
chr3 (155-238)||(5258590-5258674)
chr3 (116-192)||(8517523-8517599)
chr3 (249-292)||(40592253-40592296)
chr3 (246-301)||(40845224-40845279)
chr3 (155-236)||(44331892-44331974)
chr3 (81-266)||(49200042-49200226)
chr3 (155-208)||(6096263-6096316)
chr3 (12-41)||(21711554-21711583)
chr3 (155-191)||(3393293-3393329)
chr3 (81-201)||(8127036-8127154)
chr3 (156-208)||(46173186-46173238)
[»] chr6 (50 HSPs)
chr6 (8-301)||(3073047-3073343)
chr6 (8-301)||(411685-411981)
chr6 (19-301)||(22709360-22709645)
chr6 (12-301)||(5674229-5674520)
chr6 (21-301)||(2171840-2172104)
chr6 (81-301)||(6097787-6097986)
chr6 (12-302)||(34166665-34166956)
chr6 (114-301)||(27647467-27647654)
chr6 (136-292)||(30125026-30125182)
chr6 (114-301)||(16578915-16579101)
chr6 (114-301)||(16616279-16616465)
chr6 (103-301)||(6136350-6136547)
chr6 (12-301)||(33342398-33342688)
chr6 (120-292)||(11857387-11857559)
chr6 (12-293)||(34164451-34164734)
chr6 (81-302)||(23896738-23896958)
chr6 (97-301)||(25420797-25421000)
chr6 (114-302)||(16554453-16554640)
chr6 (114-302)||(16631009-16631196)
chr6 (81-293)||(13150856-13151067)
chr6 (106-292)||(22010197-22010382)
chr6 (120-292)||(14741934-14742106)
chr6 (29-301)||(26253589-26253843)
chr6 (19-301)||(5756951-5757235)
chr6 (12-302)||(6026833-6027123)
chr6 (16-292)||(31085954-31086234)
chr6 (108-238)||(5266480-5266610)
chr6 (81-292)||(5016977-5017187)
chr6 (116-292)||(6438899-6439075)
chr6 (81-292)||(10076673-10076882)
chr6 (116-302)||(16839146-16839332)
chr6 (16-201)||(18234420-18234608)
chr6 (21-193)||(25420999-25421172)
chr6 (116-302)||(33329931-33330117)
chr6 (210-293)||(34151835-34151917)
chr6 (120-238)||(14737128-14737246)
chr6 (114-238)||(16652759-16652883)
chr6 (116-302)||(33335428-33335614)
chr6 (246-292)||(5266599-5266645)
chr6 (246-292)||(14737093-14737139)
chr6 (21-77)||(6097743-6097799)
chr6 (246-302)||(16652715-16652770)
chr6 (116-301)||(6005822-6006007)
chr6 (116-238)||(28155133-28155255)
chr6 (226-292)||(5343990-5344056)
chr6 (246-292)||(28155098-28155144)
chr6 (116-192)||(5343880-5343956)
chr6 (248-292)||(21272470-21272514)
chr6 (155-238)||(3809369-3809452)
chr6 (246-302)||(24714941-24714998)
[»] chr1 (38 HSPs)
chr1 (12-301)||(40281958-40282250)
chr1 (21-301)||(9986785-9987068)
chr1 (21-301)||(21053540-21053823)
chr1 (19-301)||(19365768-19366053)
chr1 (8-301)||(51764990-51765267)
chr1 (19-302)||(19360911-19361178)
chr1 (106-302)||(20622626-20622822)
chr1 (12-302)||(24202250-24202522)
chr1 (19-302)||(13604094-13604379)
chr1 (21-301)||(44203218-44203499)
chr1 (114-302)||(9036002-9036189)
chr1 (116-293)||(41391002-41391178)
chr1 (116-292)||(39445898-39446074)
chr1 (116-292)||(44023385-44023561)
chr1 (17-292)||(26644382-26644656)
chr1 (116-292)||(1054522-1054698)
chr1 (116-292)||(25439407-25439583)
chr1 (106-238)||(24793709-24793841)
chr1 (116-292)||(25444600-25444776)
chr1 (302-364)||(49712025-49712087)
chr1 (106-218)||(24786907-24787019)
chr1 (81-301)||(37070173-37070392)
chr1 (116-238)||(41398657-41398778)
chr1 (16-292)||(13598737-13599016)
chr1 (19-77)||(19358531-19358589)
chr1 (16-301)||(3282044-3282331)
chr1 (224-294)||(21536119-21536189)
chr1 (246-292)||(24793674-24793720)
chr1 (16-167)||(21536177-21536330)
chr1 (246-293)||(41398767-41398814)
chr1 (155-238)||(20762310-20762394)
chr1 (81-212)||(31658904-31659033)
chr1 (81-212)||(49918015-49918144)
chr1 (155-205)||(28220672-28220722)
chr1 (155-205)||(28223867-28223917)
chr1 (155-205)||(3156540-3156590)
chr1 (16-191)||(44454846-44455023)
chr1 (116-192)||(43988057-43988133)
[»] chr8 (43 HSPs)
chr8 (8-301)||(2627318-2627614)
chr8 (19-301)||(26288232-26288517)
chr8 (19-301)||(26301489-26301774)
chr8 (19-301)||(26313483-26313768)
chr8 (27-301)||(1261414-1261692)
chr8 (63-292)||(4759542-4759772)
chr8 (28-292)||(36979741-36980006)
chr8 (81-292)||(33037295-33037504)
chr8 (106-292)||(30656088-30656274)
chr8 (106-292)||(18852635-18852821)
chr8 (106-292)||(18870029-18870215)
chr8 (114-302)||(3439087-3439273)
chr8 (116-292)||(10683747-10683923)
chr8 (177-301)||(31042908-31043032)
chr8 (12-304)||(42575619-42575912)
chr8 (125-301)||(7412776-7412952)
chr8 (136-292)||(6311771-6311927)
chr8 (120-292)||(25327672-25327844)
chr8 (81-301)||(15290143-15290361)
chr8 (81-301)||(15470512-15470730)
chr8 (107-288)||(7289439-7289620)
chr8 (116-292)||(39784333-39784509)
chr8 (26-238)||(25689604-25689817)
chr8 (16-292)||(5701960-5702240)
chr8 (136-238)||(10688661-10688763)
chr8 (116-302)||(35745794-35745980)
chr8 (82-153)||(31043035-31043106)
chr8 (19-77)||(31043133-31043191)
chr8 (246-292)||(10688626-10688672)
chr8 (81-238)||(43036062-43036218)
chr8 (81-236)||(42435582-42435736)
chr8 (246-301)||(25689561-25689615)
chr8 (81-205)||(15212459-15212581)
chr8 (155-260)||(1746664-1746769)
chr8 (246-293)||(4456578-4456625)
chr8 (81-208)||(22975986-22976111)
chr8 (155-231)||(4733472-4733548)
chr8 (81-201)||(19175305-19175424)
chr8 (155-238)||(19945785-19945869)
chr8 (155-238)||(31217895-31217979)
chr8 (155-191)||(34254774-34254810)
chr8 (16-75)||(7412677-7412736)
chr8 (155-191)||(34256950-34256986)
[»] chr7 (53 HSPs)
chr7 (81-301)||(43504501-43504721)
chr7 (19-302)||(18409114-18409400)
chr7 (19-301)||(21646358-21646643)
chr7 (8-301)||(39730933-39731248)
chr7 (12-301)||(48408398-48408671)
chr7 (19-301)||(18413990-18414275)
chr7 (16-301)||(25767258-25767540)
chr7 (106-301)||(24789426-24789621)
chr7 (19-301)||(2479676-2479960)
chr7 (81-292)||(21640206-21640415)
chr7 (12-302)||(6592632-6592922)
chr7 (106-292)||(2058411-2058596)
chr7 (81-301)||(47264048-47264267)
chr7 (12-301)||(6594848-6595137)
chr7 (114-301)||(20343500-20343686)
chr7 (106-292)||(20357036-20357222)
chr7 (81-301)||(32060671-32060888)
chr7 (21-301)||(18392499-18392780)
chr7 (106-292)||(12406664-12406849)
chr7 (16-302)||(21983580-21983868)
chr7 (104-302)||(1532883-1533100)
chr7 (120-292)||(4873541-4873713)
chr7 (116-289)||(24023830-24024003)
chr7 (21-301)||(1562306-1562587)
chr7 (116-294)||(21811745-21811923)
chr7 (16-301)||(21989245-21989531)
chr7 (198-301)||(44847619-44847722)
chr7 (120-292)||(31109078-31109251)
chr7 (198-292)||(12397390-12397484)
chr7 (21-202)||(18389063-18389246)
chr7 (14-205)||(47676439-47676631)
chr7 (116-288)||(16880476-16880648)
chr7 (116-288)||(16885331-16885503)
chr7 (21-77)||(43504457-43504513)
chr7 (15-120)||(48491334-48491443)
chr7 (16-208)||(49092026-49092223)
chr7 (155-238)||(4178413-4178497)
chr7 (116-192)||(24260929-24261005)
chr7 (81-205)||(47674316-47674438)
chr7 (81-200)||(2647271-2647388)
chr7 (246-292)||(79958-80004)
chr7 (226-292)||(24260829-24260895)
chr7 (106-175)||(12397312-12397380)
chr7 (116-288)||(24265689-24265861)
chr7 (246-302)||(18390508-18390563)
chr7 (15-120)||(48489186-48489295)
chr7 (81-120)||(33332102-33332141)
chr7 (19-169)||(44847730-44847882)
chr7 (155-258)||(48599941-48600044)
chr7 (155-205)||(4538996-4539046)
chr7 (81-170)||(2761675-2761762)
chr7 (155-212)||(6360575-6360632)
chr7 (155-243)||(2361603-2361691)
[»] scaffold0188 (1 HSPs)
scaffold0188 (16-301)||(17431-17700)
[»] scaffold1519 (1 HSPs)
scaffold1519 (19-260)||(523-767)
[»] scaffold0286 (1 HSPs)
scaffold0286 (21-301)||(21939-22203)
[»] scaffold0565 (1 HSPs)
scaffold0565 (21-301)||(2904-3185)
[»] scaffold0006 (3 HSPs)
scaffold0006 (19-302)||(132751-133036)
scaffold0006 (16-292)||(2830-3109)
scaffold0006 (16-292)||(6022-6301)
[»] scaffold0140 (2 HSPs)
scaffold0140 (177-301)||(7911-8035)
scaffold0140 (25-153)||(8038-8168)
[»] scaffold0674 (1 HSPs)
scaffold0674 (97-302)||(4107-4311)
[»] scaffold0137 (1 HSPs)
scaffold0137 (12-303)||(5857-6149)
[»] scaffold0087 (2 HSPs)
scaffold0087 (19-294)||(43441-43718)
scaffold0087 (16-230)||(36376-36592)
[»] scaffold0510 (1 HSPs)
scaffold0510 (83-302)||(1082-1300)
[»] scaffold0355 (1 HSPs)
scaffold0355 (120-292)||(3345-3517)
[»] scaffold0135 (1 HSPs)
scaffold0135 (106-292)||(34562-34747)
[»] scaffold0098 (2 HSPs)
scaffold0098 (19-238)||(45539-45760)
scaffold0098 (248-301)||(45751-45804)
[»] scaffold0464 (1 HSPs)
scaffold0464 (116-292)||(761-937)
[»] scaffold1455 (1 HSPs)
scaffold1455 (225-292)||(1717-1784)
[»] scaffold0665 (2 HSPs)
scaffold0665 (120-238)||(8112-8230)
scaffold0665 (246-292)||(8219-8265)
[»] scaffold0259 (1 HSPs)
scaffold0259 (116-288)||(1751-1923)
[»] scaffold0028 (1 HSPs)
scaffold0028 (116-288)||(148456-148628)
[»] scaffold0197 (2 HSPs)
scaffold0197 (116-302)||(18662-18848)
scaffold0197 (116-288)||(13796-13968)
[»] scaffold0036 (1 HSPs)
scaffold0036 (155-292)||(86067-86203)
[»] scaffold0066 (1 HSPs)
scaffold0066 (155-257)||(20860-20963)
[»] scaffold0009 (1 HSPs)
scaffold0009 (116-288)||(176462-176634)
[»] scaffold0002 (1 HSPs)
scaffold0002 (155-191)||(434218-434254)


Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 26177762 - 26177465
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||||||||||| |   | ||||| |||||||||||||| ||    
T  26177762 ccaactctcttcaaaatctgcgcaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgtccg 26177663  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  26177662 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaa 26177563  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26177562 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 26177465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 8 - 304
Target Start/End: Original strand, 18441937 - 18442236
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||| |  |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   | ||||| |||||||||||||||||    
T  18441937 ccaactctccttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgttcg 18442036  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18442037 tcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaa 18442136  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacatga 304  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18442137 accagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacatga 18442236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 9789513 - 9789810
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||| |  |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   | ||||| ||||| |||||||||||    
T  9789513 ccaactctccttcaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattttcaggtcgtgtcacgaatggtgcgttcg 9789612  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    || ||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9789613 tcgcaagaaacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaa 9789712  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9789713 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacat 9789810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 26170653 - 26170357
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   | ||||| |||||||||||||| ||    
T  26170653 ccaactctcttcaaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatatccaggtcgtgtcacgattggtgcgtccg 26170554  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||    
T  26170553 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaa 26170454  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  26170453 accagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaaaactcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 16407918 - 16407641
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcc 107  Q
    |||||||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||||||||||                ||| |||| |||||    
T  16407918 ccaactctcttcaaaatctgcacaagaatacttaaatactagccctccactgataaaatcgtgtcacgat----------------tggagcgtacgtcc 16407835  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||    
T  16407834 caaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc 16407735  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16407734 agctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 81 - 301
Target Start/End: Complemental strand, 29720186 - 29719965
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgca-aatcgtgtcacgatttcccacaat 179  Q
    |||||| |||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29720186 atcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaat 29720087  T
Q  180 cgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 279  Q
    ||||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29720086 cgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 29719987  T
Q  280 aatttgaagccaaatctcaaca 301  Q
    ||||||||| ||||||||||||    
T  29719986 aatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 16409354 - 16409076
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||                ||| |||| |||||    
T  16409354 ccaactctcttcaaaatctgcacaagaacacttaaatactagctctccactaataaaatcgtgtcacgat----------------tggagcgtacgtcc 16409271  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||||  |||||||||| ||||||||    
T  16409270 caatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaacc 16409171  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  16409170 agctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacat 16409076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 26 - 301
Target Start/End: Original strand, 24136207 - 24136484
Alignment:
Q  26 tgcacaagaacacttaa-ataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacgaccag 121  Q
    ||||||||||||||| | |||| ||| |||| || ||| ||||||| |||||| |   ||||||| |||||||  ||||| |||||||||||| ||||||    
T  24136207 tgcacaagaacactttatatactagctttcctctgatacaatcgtgccacgatttccagatcgtgtcacgatt--tgcgtacgtcccaaggtatgaccag 24136304  T
Q  122 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca 221  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||    
T  24136305 tccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatca 24136404  T
Q  222 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||||||    
T  24136405 cgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 122 - 302
Target Start/End: Complemental strand, 29722332 - 29722151
Alignment:
Q  122 tccttatcatggaaacttaacgagcaagtttgca-aatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatc 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||| ||| |    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  221 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacat 29722151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 9353091 - 9352807
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    ||||||||||||||||||||||||||||||| ||||  || ||||||||||| |||| | |    |||||| |||||||| |  || || ||||||||||    
T  9353091 caaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgttttccaaatcgtgccacgattgatatgtacgacccaaggtac 9352992  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| |||||||||| |||||||||||||||||| || ||||||| || |||||| |||||||||||||||||||||    
T  9352991 gaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacg 9352893  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||| || ||||||||||||||||||| | ||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  9352892 gcattacaaaatcgtgtcacgatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 30631764 - 30631940
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||||||||||||||   |||||||||||||||||||| |||||||||| ||||||||  |||||||||  |||||||    
T  30631764 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacg 30631863  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  30631864 gcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30631940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 114 - 301
Target Start/End: Original strand, 22536666 - 22536852
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||| ||| || ||||| ||||||||||| | ||||||    
T  22536666 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctca 22536765  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  22536766 cggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 27450216 - 27450401
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  27450216 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 27450314  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  27450315 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 27450401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 177 - 301
Target Start/End: Original strand, 15465001 - 15465125
Alignment:
Q  177 aatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 276  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  15465001 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagacc 15465100  T
Q  277 acaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||    
T  15465101 acaaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 29752265 - 29752392
Alignment:
Q  176 caatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagac 275  Q
    |||||||| || ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29752265 caatcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagac 29752364  T
Q  276 cacaaatttgaagccaaatctcaacatg 303  Q
    ||||||||||||| ||||||||||||||    
T  29752365 cacaaatttgaagacaaatctcaacatg 29752392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 25077987 - 25077705
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  25077987 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 25077890  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||| ||| || ||||||||    
T  25077889 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacg 25077790  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| | |  ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  25077789 gcacctc-caatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa-ctcaacat 25077705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 25135956 - 25135674
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  25135956 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 25135859  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||| ||| || ||||||||    
T  25135858 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttgcacccctacaaccctagctcacg 25135759  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| | |  ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  25135758 gcacctc-caatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa-ctcaacat 25135674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 27445373 - 27445558
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  27445373 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 27445471  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27445472 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaa 27445558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 38219746 - 38219949
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||     || |||||||| || ||||||| |||||||||| |    |||||| |||||||||  ||| |||| ||||    
T  38219746 tcttcaaaatctgcacaagaacact-----actagccttcctctgataaaattgtgtcacgatttccaaatcgtgtcacgattggaacgtacgtcacaag 38219840  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagct 211  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||  ||||||||| ||||||||||||| ||||||||||    
T  38219841 gtacgaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagct 38219940  T
Q  212 cacggcatc 220  Q
    |||||||||    
T  38219941 cacggcatc 38219949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 40379967 - 40379678
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  40379967 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 40379871  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || ||||||||||| ||    
T  40379870 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccc 40379771  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     ||||||||||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  40379770 tagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 40382178 - 40381888
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  40382178 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 40382082  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || ||||||||||| ||    
T  40382081 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccc 40381982  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     ||||||||||| | | || |||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  40381981 tagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaacat 40381888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 16546497 - 16546215
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  16546497 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 16546400  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || ||||||||||| || ||||||||    
T  16546399 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacg 16546300  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  16546299 gcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacat 16546215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 174 - 303
Target Start/End: Original strand, 29751597 - 29751726
Alignment:
Q  174 cacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccag 273  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  29751597 cacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccag 29751696  T
Q  274 accacaaatttgaagccaaatctcaacatg 303  Q
    ||||||||||||||| ||||||||||||||    
T  29751697 accacaaatttgaagacaaatctcaacatg 29751726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 177 - 302
Target Start/End: Complemental strand, 36931967 - 36931842
Alignment:
Q  177 aatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 276  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| |||    
T  36931967 aatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaacc 36931868  T
Q  277 acaaatttgaagccaaatctcaacat 302  Q
    ||||||||||||| ||||||||||||    
T  36931867 acaaatttgaagcgaaatctcaacat 36931842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 43599124 - 43599310
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  43599124 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43599222  T
Q  206 ccagctcacggcatcac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |   ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  43599223 ctagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43599310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 43604616 - 43604802
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  43604616 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43604714  T
Q  206 ccagctcacggcatcac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |   ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  43604715 ctagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43604802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 43610108 - 43610294
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  43610108 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43610206  T
Q  206 ccagctcacggcatcac-gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |   ||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  43610207 ctagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 1456831 - 1456646
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||| ||||||||||| ||| ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||| |||    
T  1456831 cccaaggta-gacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaaa 1456733  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  1456732 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 10593132 - 10592844
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| |||||||||||||||||| |||| || ||||| ||  | ||||||||||||||| |     |||||| ||||||   ||||| |  ||    
T  10593132 ctctcttcaaa-tctgcacaagaacacttacatactagtcttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatc--tgcgtaccacc 10593036  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
     |||  ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||| ||||||||||| |     
T  10593035 gaagaaacgaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacct 10592936  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    | ||||||||| | || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10592935 atctcacggcacc-cggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 16544275 - 16543993
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  16544275 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 16544178  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || |||||||| || || |||||||     
T  16544177 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagctcaca 16544078  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| | |  |||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  16544077 gcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacat 16543993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 292
Target Start/End: Complemental strand, 29402728 - 29402558
Alignment:
Q  122 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca 221  Q
    |||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| |||||| |||  |     
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  222 cgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
     ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 29402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 35388014 - 35388169
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| |   ||||||| ||||||| |  ||| ||||||||||||     
T  35388014 caaaatctgcacaagaacacttaaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtacgtcccaaggtat 35388113  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 171  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||    
T  35388114 gaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 15045096 - 15045271
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||| ||||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||  |||||||    
T  15045096 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 15045195  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  15045196 gcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 15045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 11916732 - 11916452
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| |||  ||| |||   |||||||||||||| | |     ||||||| ||||||||||||| || ||||||    
T  11916732 cttcaaaatctgcacaagaacacttatatagcagttttcaactgtcaaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaag 11916633  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gc 210  Q
    |||||||||  ||| ||| || |||| || | | |||||||| ||||||||||||| ||||||| ||||||| || ||||  |||||||||||||||  |    
T  11916632 gtacgaccaa-cctgatcctgaaaacatacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccacac 11916534  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    |||| || |    |||||||| |||| ||   || | ||||||||||||| |||||||| || ||||||||||||||||||||    
T  11916533 tcactgcct-ggaaaatcgtgacacgttgatgaaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 28807260 - 28807084
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| | |||||||    |||||||||||||||||||  |||||| || ||||| |||||||||||||  | |||||    
T  28807260 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac 28807161  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||| | | |||||||||||||  |||| ||||| ||||||| | |||||||||||||||| ||||||||||||||    
T  28807160 ggcatctc-agatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaa 28807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 12083937 - 12083659
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| |||| |||   ||||| |||||||| | |    ||||||||||||||||||| | || |||||||    
T  12083937 cttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgttttccaaatcgtgacacgattggtgcatacgacccaagg 12083838  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gct 211  Q
    ||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| ||||||| ||  ||| ||  |||  |||||||| |||||| |||    
T  12083837 tacgacca-accttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaactgtgacacaattgagcaccctgtaaaccatgct 12083739  T
Q  212 cacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| || |   ||||||||| |||| ||   || ||||||||||||||| ||||||||||| |||| |||||| |||||||    
T  12083738 cactgcct-gggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaa 12083659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 43592679 - 43592789
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  43592679 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 43592777  T
Q  206 ccagctcacggc 217  Q
    | ||||||||||    
T  43592778 ctagctcacggc 43592789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 294
Target Start/End: Complemental strand, 37556308 - 37556131
Alignment:
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcacg 215  Q
    ||||||||||||||  || ||||||| |||||||||  | |||||||||| ||||||||  |||||| || |||||| | || |  ||||  | ||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37556209  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
    ||||| | | |||||||||||||  | || ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  37556208 gcatctc-agatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37556131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 14520567 - 14520854
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| |||  || || |  ||   |||||||||||||| | |    ||||||||||||||  ||||| || |||||||    
T  14520567 cttcaaaatctgcacaagaacacttatataggagtctccagctgtcaaaatcgtgtcacgttttccaaatcgtgacacgattaatgcgtacgacccaagg 14520666  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgc-aaacca-gc 210  Q
    ||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| ||||||| |||| || || ||||  ||||||||  |||||| ||    
T  14520667 tacgaccaa-ccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcatgacacgattgagcaccctgagaaaccatgc 14520765  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    || | || | |  |||||||| |||| ||   || ||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||    
T  14520766 tccctgcctga--aaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 14520854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 117 - 294
Target Start/End: Complemental strand, 37561130 - 37560953
Alignment:
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcacg 215  Q
    ||||||||||||||  || ||||||| |||||||||    |||||||||||||||||||  |||||| || |||||| | || |  ||||  | ||||||    
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37561031  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
    ||||| | | |||||||||||||    || ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  37561030 gcatctc-agatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 33768587 - 33768773
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  | |||||    
T  33768587 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33768686  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |  | ||||||||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  33768687 ggcatctccga-tcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 33768773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 33791719 - 33791905
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  | |||||    
T  33791719 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33791818  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |  | ||||||||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  33791819 ggcatctccga-tcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 33791905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 301
Target Start/End: Original strand, 2785778 - 2785963
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||   ||||||    
T  2785778 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 2785877  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||| |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||||| | ||||||    
T  2785878 ggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 116 - 238
Target Start/End: Original strand, 31180665 - 31180787
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||||||| |||| |   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||    
T  31180665 gaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacg 31180764  T
Q  216 gcatcacgaaatcgtgtcacgat 238  Q
     || |  ||||||||||||||||    
T  31180765 acaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 29722403 - 29722334
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    ||||||||| |  ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  29722403 ccaactctccttcaaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgat 29722334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 36932106 - 36931970
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacga---tctgatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    ||||| ||||||||||||||||||||||||| ||||  || ||||||||||| |||||   ||  || ||| |||||||| | ||| || ||||||||||    
T  36932106 caaaaactgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgattttcaaattgtgtcacgattgatacgtacgacccaaggtac 36932007  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttg 153  Q
    |||||  ||||||| || ||||||||| ||||||||||    
T  36932006 gacca-accttatcctgaaaacttaacaagcaagtttg 36931970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 29751467 - 29751615
Alignment:
Q  26 tgcacaagaacacttaa-ataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacgacca 120  Q
    ||||||||||||||| | |||| |||||||| ||||   |||||||||||||| |     |||||| |||||||  ||||| |  ||||||||| |||||    
T  29751467 tgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattttccaaatcgtgtcacgatt--tgcgtacaacccaaggtatgacca 29751564  T
Q  121 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 171  Q
    |||||||||| ||| |||||||||||||||||   ||||||||||||||||    
T  29751565 gtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 31180776 - 31180822
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  31180776 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 31180822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  251 tcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 43592800 - 43592846
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  43592800 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 43592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 29720243 - 29720174
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    ||||||||| |  |||| |||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  29720243 ccaactctccttcaaatttgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgat 29720174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 301
Target Start/End: Complemental strand, 31396674 - 31396489
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    |||||||||||||||  |||||||||| | ||||| |   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  31396674 gaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 31396575  T
Q  215 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     || || |  | |||||||||||| ||||||| |||| ||||||| | ||||||| ||| ||||||||||||||||||| | ||||||    
T  31396574 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 31396489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 15464874 - 15464932
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||||| || |||| ||| ||||||||||| ||||||    
T  15464874 caaaatctgcacaagaacacttaaatactagtcttctactgataaaatcgtgccacgat 15464932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 302
Target Start/End: Complemental strand, 31401531 - 31401345
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    |||||||||||||||  |||||||||  |||||||||   |||| |||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  31401531 gaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 31401432  T
Q  215 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     || || |  | |||||||||||| ||||||| |||| ||||||| | || |||| ||| ||||||||||||||||||| | |||||||    
T  31401431 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaacat 31401345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 224
Target Start/End: Original strand, 35388166 - 35388201
Alignment:
Q  189 atttggcaccctgcaaaccagctcacggcatcacga 224  Q
    ||||||||||||||||||||||||||||||||||||    
T  35388166 atttggcaccctgcaaaccagctcacggcatcacga 35388201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 16650995 - 16651103
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| ||  ||||||||||||||  ||||||| || |||| || | | ||||||   ||||||||||||| ||||||| ||||    
T  16650995 atcgtgacacggttggtgcgtacgatccaaggtacgaccaa-ccttatcctgaaaacgtacccaacaagttat-aaatcgtgtcacgttttcccaaaatc 16651092  T
Q  181 gtgtcatgatt 191  Q
    |||||||||||    
T  16651093 gtgtcatgatt 16651103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 28751026 - 28751132
Alignment:
Q  154 caaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacga-tgccaaat-tcgtgt 251  Q
    ||||| |||||||| ||||||| |||||||||| ||||   ||||||||||| || ||| || ||| |||||||||||  |||| |||||||| ||||||    
T  28751026 caaattgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctgcaaaacaactctcgacattacgaaatcgtgaaacgattgccaaatatcgtgt 28751125  T
Q  252 cacgatt 258  Q
    |||||||    
T  28751126 cacgatt 28751132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 15464968 - 15465016
Alignment:
Q  123 ccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 171  Q
    ||||||| || ||||||||| |||||||||| |||||||||||||||||    
T  15464968 ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 15465016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 292
Target Start/End: Original strand, 43625605 - 43625640
Alignment:
Q  257 tttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| |||||||||||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaa 43625640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 42428863 - 42428913
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||||||| ||||||| |||||||||| |||| | |||||||||||    
T  42428863 aaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 42428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 213067 - 213014
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||||||||||||| ||||||| |||||||||| |||| | | ||||||||||||    
T  213067 aaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaaacca 213014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 11458 - 11753
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |   ||||||| |||||||||||||| ||    
T  11458 ccaactctcttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtgcgtacg 11557  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  11558 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca-aatcgtgtcacgatttggcaccctgcaa 11656  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  11657 accagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatctcaaca 11753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 9032 - 9309
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||                |||||||| |||||    
T  9032 ccaactctcttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgat----------------tggtgcgtacgtcc 9115  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  9116 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca-aatcatgtcacgatttggcaccctgcaaacc 9214  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9215 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacat 9309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 31495606 - 31495902
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||| |  |||||||||||||||||||||||||  |||| |||||| |||||||||||||||||| |   | | ||| |||||||||||||||||    
T  31495606 ccaactctccttcaaatctgcacaagaacacttaaatattagccctccactgataaaatcgtgtcacgatttccaggttgtgtcacgattggtgcgttcg 31495705  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31495706 tcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaa 31495805  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31495806 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 21 - 302
Target Start/End: Original strand, 13992596 - 13992880
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |   ||||||| |||||||| | ||| |||| ||||||| ||    
T  13992596 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattgatacgtacgtcacaaggtatga 13992695  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc 217  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |    
T  13992696 ccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgac 13992795  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13992796 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacat 13992880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 82 - 301
Target Start/End: Complemental strand, 28468196 - 28467977
Alignment:
Q  82 tcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcg 181  Q
    ||||| ||||||| || ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||  ||||    
T  28468196 tcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcg 28468097  T
Q  182 tgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 281  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  28468096 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaa 28467997  T
Q  282 tttgaagccaaatctcaaca 301  Q
    ||||||||||||||||||||    
T  28467996 tttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 21 - 292
Target Start/End: Original strand, 24742296 - 24742569
Alignment:
Q  21 aaatctgcacaagaacact-taaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    ||||||||||||||||||  || |||| || ||||| || |  ||||||||||||||| |   ||||||| |||||||  ||||| ||| || ||||| |    
T  24742296 aaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtggcacgatt--tgcgtccgttcccaggtatg 24742393  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacgg 216  Q
    |||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| |||||||||    
T  24742394 accagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg 24742493  T
Q  217 catcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    || | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24742494 cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 7122556 - 7122274
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  7122556 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 7122460  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||||||| ||    
T  7122459 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccc 7122360  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
     ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  7122359 tagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 31985394 - 31985127
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    ||||||||||||||||||||||||||||||| || |||| ||| ||||||||||| |||||| |    |||||| |||||||| ||||| |||| |||||    
T  31985394 cttcaaaatctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgatttccaaatcgtgtcacgattgatgcgtacgtcacaagg 31985295  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||||||||||| || ||||||||| |||||||||| ||||                     ||||||| ||||||||||||||| ||| |||||    
T  31985294 tacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaat---------------------cgtgtcacgatttggcaccctgctaactagctc 31985216  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  31985215 acggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaaatctcaaca 31985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 108 - 302
Target Start/End: Complemental strand, 7124681 - 7124488
Alignment:
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||||||| ||    
T  7124681 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccc 7124582  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  7124581 tagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa-ctcaacat 7124488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 5148015 - 5148302
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| |||  ||| |||| ||||||||||| | ||   ||||||||||||||||||||| || |||||||    
T  5148015 cttcaaaatctgcacaagaacacttatatagcagtcttaaactgataagatcgtgtcacgttttgcaaatcgtgacacgattggtgcgtacgacccaagg 5148114  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||  ||||||| || |||| || | || ||||||| ||||||||||| | |||| || ||||||| || |||| | |||||||||||| |||||    
T  5148115 tacgaccaa-ccttatcctgaaaacgtatccagtaagtttgaaaatcgtgtcaagttttcacaaaatcgtgccacgattggtcaccctgcaaactagctc 5148213  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| |||  | ||||||||||||| ||  ||| ||||||||||||||| || |||||||| ||||||||||||||||||| | ||||||    
T  5148214 acgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaaca 5148302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 9224092 - 9223907
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||| |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  9224092 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 9223994  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9223993 ctagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9223907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 9228879 - 9228694
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||| |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  9228879 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 9228781  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9228780 cgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9228694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 51520857 - 51521042
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| || |||||||||||| ||| |||||||||||||||||   |||||||||| |||||||||  |||||| || ||||||||  ||||||||    
T  51520857 cccaaggta-gatcagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaa 51520955  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  51520956 ctagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 51521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 5138165 - 5137874
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  5138165 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatt--tgcgtccgtcc 5138069  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| |||||| |||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| ||||||| || ||||||   |||||||| |    
T  5138068 caaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaacc 5137969  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||| | |||||||||||    
T  5137968 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaacat 5137874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 5135939 - 5135649
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  5135939 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatt--tgcgtccgtcc 5135843  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| |||||| |||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| ||||||| || ||||||   |||||||| |    
T  5135842 caaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaacc 5135743  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    | | ||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||| | ||||||||||    
T  5135742 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagac-aatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 56141705 - 56141519
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt-ggcaccctgcaa 204  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||| |||  |||||||    
T  56141705 cccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgcaa 56141607  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    || |||||||| |  | | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  56141606 actagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 56141519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 5733062 - 5733239
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagct-cac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||||||||| ||||||||  |||||||||  ||| |||    
T  5733062 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcac 5733161  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  5733162 ggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 5733239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 116 - 301
Target Start/End: Complemental strand, 8393166 - 8392982
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||   |||||||| || |||||||    
T  8393166 gaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 8393067  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  8393066 ggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 8395479 - 8395190
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||| | ||| |||||||| ||  | ||||||||||||||| |     |||||| ||||||   ||||| |  ||    
T  8395479 ctctcttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatc--tgcgtaccacc 8395384  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||  ||||||||||||||||| ||| |||||||||||||||||    || |||||||||||| ||  |||||||  | ||||||   |||||||| ||    
T  8395383 caagaaacgaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccc 8395284  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  8395283 tagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 8395190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 3814422 - 3814597
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||||||| ||||||| || ||||||||  | |||||||  ||| |||    
T  3814422 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca-aatcgtgacacgatttggcgtcttgcaaacttgcttacg 3814520  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |   |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  3814521 gtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 3814597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 16628632 - 16628354
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||| |||| |||||||| ||| ||||||||  ||   |||||||||||||| | |    ||||||||||||||||||||| || |||||||    
T  16628632 cttcaaaatctgaacaaaaacacttatatagcagccttcatctgtcaaaatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacgacccaagg 16628533  T
Q  113 tacgaccagtccttatcatggaaact-taacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gc 210  Q
    ||||||||  |||||||||| |||   |||| |||||||||| ||||||||||||| ||||||| ||||||| || ||||  |||||||||||| || ||    
T  16628532 tacgaccaa-ccttatcatgaaaaaagtaacaagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaagcatgc 16628434  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| || | |  |||||||| |||  ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  16628433 tcactgcctga--aaatcgtgacacattgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 16628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 29761041 - 29761196
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||  ||||| ||| |||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||    
T  29761041 atcgtgccacgatt--tgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 29761138  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgat 238  Q
    ||| || ||||||||  ||||||||| ||||||||||| | |||||||||||||||||    
T  29761139 gtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 45347501 - 45347325
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||| || ||||||  | |||||    
T  45347501 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45347402  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||| | || |||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  45347401 ggcatctctaa-tcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaa 45347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 18856125 - 18856301
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||| || || ||||| ||| || ||||||  | |||||    
T  18856125 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcac 18856224  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| | | || |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  18856225 ggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18856301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 120 - 260
Target Start/End: Complemental strand, 18712435 - 18712295
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||||      
T  18712435 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 18712336  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 260  Q
    |  |||||||||||||||||||||| |||||||||||||||    
T  18712335 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 6743175 - 6742897
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| |||| |||   ||||| |||||| | | |     |||||||||||||| |||||| |||||||||    
T  6743175 cttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaag 6743076  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagct 211  Q
    |||||||||  ||||||| || |||| |  | | |||||||  ||||||||||||| ||||||| || |||| || |||| ||||||||| ||| |||||    
T  6743075 gtacgaccaa-ccttatcctgaaaacgtgcccaacaagttta-aaatcgtgtcacgttttcccaaaaacgtgccacgattaggcaccctgaaaaacagct 6742978  T
Q  212 cacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | || | |  | |||||||| |||| ||   || ||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  6742977 ctcgacgttgcaaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaa 6742897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 3777956 - 3778164
Alignment:
Q  83 cgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgt 182  Q
    |||| |||||||||||||| || |||||||||||||||  ||||||| || |||| || ||||||| |||| ||||||||||||| ||||||| ||||||    
T  3777956 cgtggcacgattggtgcgtacgacccaaggtacgaccaa-ccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgt 3778054  T
Q  183 gtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 281  Q
    | || ||||  ||||||||||||||| |||| | || |    |||||||| |||| ||    | ||||||||||||||| ||||||||||| ||||||||    
T  3778055 gacacgattgagcaccctgcaaaccatgctcgctgc-ttggaaaatcgtgacacgttgatgtaatcgtgtcacgatttctctgttcttccaaaccacaaa 3778153  T
Q  282 tttgaagccaa 292  Q
    |||||||||||    
T  3778154 tttgaagccaa 3778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 8689256 - 8689078
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | |    |||||| |||||||||||||| || |||||||    
T  8689256 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaatcgtggcacgattggtgcgtacgacccaagg 8689157  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    ||||||||  ||||||| || |||| || | |||||||||| ||||||||||||| ||||||| |||||||||| |||||    
T  8689156 tacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattt 8689078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 5268960 - 5268772
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||  ||||||||||||||| |    |  ||||||||||||||||||||| || ||||||    
T  5268960 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 5268861  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg 201  Q
    |||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| ||||||| ||||||| || ||||  ||||||||    
T  5268860 gtacgacca-accttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctg 5268772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 16623053 - 16622775
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    ||||||||||||||||| |||||||| ||| ||||||||  ||   |||||||||||||| | |    ||||||||||||||||||||| || |||||||    
T  16623053 cttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacgacccaagg 16622954  T
Q  113 tacgaccagtccttatcatggaaa-cttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gc 210  Q
    ||||||||  ||||||| || ||| | || | |||||||||| ||||||||||||| ||||||| ||| ||| ||  |||  ||||  ||||||||| ||    
T  16622953 tacgaccaa-ccttatcctgaaaaacgtacctagcaagtttgaaaatcgtgtcacgttttcccaaaattgtgacacaattgagcacaatgcaaaccatgc 16622855  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||  | | |  |||||||| |||| ||   || ||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  16622854 tcactacctga--aaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaa 16622775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 18860446 - 18860513
Alignment:
Q  225 aatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  18860446 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18860513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 5143597 - 5143823
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccacta-ataaaa-tcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaa 110  Q
    |||||||||||||||||||||||||| ||| ||| |||| | || |||||| |||||||||| | |    ||||||||||||||||||||  |  |||||    
T  5143597 cttcaaaatctgcacaagaacacttatatagcagtcttc-agtagataaaaatcgtgtcacgttttccaaatcgtgacacgattggtgcgcacaacccaa 5143695  T
Q  111 ggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccc-tgcaaaccag 209  Q
    ||| ||||||  ||||||| || |||| || | | |||||||| ||||||||||||  |||| || ||||||| || |||| | ||||| ||||||||||    
T  5143696 ggtgcgaccaa-ccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacattttcacaaaatcgtgccacgattggtcacccctgcaaaccag 5143794  T
Q  210 ctcacggcatcacgaaatcgtgtcacgat 238  Q
    |||||| |||  | |||||||||||||||    
T  5143795 ctcacgacattgcaaaatcgtgtcacgat 5143823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 36314990 - 36314821
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| |    |  ||||||||||||||||||||| || ||||||    
T  36314990 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 36314891  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtg 183  Q
    |||||||||  ||||||| || |||| |  | |||||| ||| ||||||||||||| ||||||| |||||||    
T  36314890 gtacgacca-accttatcctgaaaacgtgcccagcaag-ttgaaaatcgtgtcacgttttcccaaaatcgtg 36314821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 36329199 - 36329030
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| |    |  ||||||||||||||||||||| || ||||||    
T  36329199 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 36329100  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtg 183  Q
    |||||||||  ||||||| || |||| |  | |||||| ||| ||||||||||||| ||||||| |||||||    
T  36329099 gtacgacca-accttatcctgaaaacgtgcccagcaag-ttgaaaatcgtgtcacgttttcccaaaatcgtg 36329030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 5143807 - 5143868
Alignment:
Q  241 caaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacat 5143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 8689097 - 8689045
Alignment:
Q  240 ccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8689045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 29761185 - 29761228
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 289  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  29761185 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 29761228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 38151965 - 38151919
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  38151965 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 38151919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 45356982 - 45356861
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||| || ||||||   ||||||    
T  45356982 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45356883  T
Q  215 ggcatcacgaaatcgtgtcacga 237  Q
    |||||| | ||||||||||||||    
T  45356882 ggcatctc-aaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 5429475 - 5429353
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||||||||||||| || ||||||||||||||| | |||| | || ||||||  | | ||||  || ||||||| ||||| ||||||| ||||    
T  5429475 atcgtgacacgattggtgcgtacgacccaaggtacgaccaat-cttaacctgaaaacttgtccaacaag-ctgaaaatcgtatcacgttttcccaaaatc 5429378  T
Q  181 gtgtcatgatttggcaccctgcaaa 205  Q
    |||||| |||| | |||||||||||    
T  5429377 gtgtcacgattagacaccctgcaaa 5429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 2209225 - 2209122
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcac 254  Q
    ||||||||||||| || |||| |||||||||| |||| ||||| ||||||| |||||| || |||  | |||||||| |||| | | ||| |||||||||    
T  2209225 aaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaaaacagctctcgacattgcaaaatcgtgacacgcttcaaaaatcgtgtcac 2209126  T
Q  255 gatt 258  Q
    ||||    
T  2209125 gatt 2209122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 5268743 - 5268700
Alignment:
Q  249 tgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  5268743 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 28468283 - 28468222
Alignment:
Q  19 caaaatctgcacaagaacacttaaa---taccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||   ||| || |||||||| ||||||||||||||||||    
T  28468283 caaaatctgcacaagaacacttaaatactactagtcttccactgataaaatcgtgtcacgat 28468222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 183
Target Start/End: Complemental strand, 5396382 - 5396281
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||||||||| || |||||||||||| ||  ||||||| || |||| || | | |||||||| ||||||||||||| ||| ||| ||||    
T  5396382 atcgtggcacgattggtgcgtacgacccaaggtacgatca-accttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacgtttttccaaaatc 5396284  T
Q  181 gtg 183  Q
    |||    
T  5396283 gtg 5396281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 10047935 - 10047981
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  10047935 tcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaa 10047981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 54882545 - 54882492
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||||||||||||| ||||||| |||||||||| |||| | ||||||||||||||    
T  54882545 aaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaacca 54882492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 54867748 - 54867794
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||| ||| || |||||||| |||||||||||||||||||    
T  54867748 tcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaa 54867794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 10047834 - 10047871
Alignment:
Q  146 caagtttgcaaatcgtgtcacgatttcccacaatcgtg 183  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  10047834 caagtttgcaaatcgtgtcacgttttcccaaaatcgtg 10047871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 25861724 - 25861605
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg-atttcccacaat 179  Q
    ||||||||||||||| ||||| || |||||||||||||||  ||||||| || |||| |  | |||||| ||| |||||||||||||  ||||||| |||    
T  25861724 atcgtgacacgattgatgcgtacgacccaaggtacgacca-accttatcctgaaaacatgcccagcaag-ttgaaaatcgtgtcacgtttttcccaaaat 25861627  T
Q  180 cgtgtcatgatttggcaccctg 201  Q
    |||| || ||||  ||||||||    
T  25861626 cgtgacacgattgagcaccctg 25861605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 26176069 - 26176126
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||||||| ||||||| ||| |||||| | || ||||||||||||| ||||||    
T  26176069 aaatcgtgtcacgttttcccaaaattgtgtcacggttgggcaccctgcaaaacagctc 26176126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 5370521 - 5370557
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatt 191  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  5370521 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 5370557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 304
Target Start/End: Complemental strand, 32289436 - 32289145
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaagg 112  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   | ||||| ||||||||| |||| ||||||||||    
T  32289436 cttcaaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggagcgtacgtcccaagg 32289337  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||  ||||||||| |||||||||||||||||||||||||    
T  32289336 tacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctc 32289237  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacatga 304  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32289236 acggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacatga 32289145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 6266557 - 6266274
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   | ||||| ||||||||||||||||||||||||  ||||    
T  6266557 aaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaacga 6266458  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc 217  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6266457 ccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggc 6266358  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6266357 atcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 4484627 - 4484923
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |   ||||||| |||||||||| ||| ||    
T  4484627 ccaactctctttcaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtacgtacg 4484726  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |  ||||||||| |||||||||||||||||    
T  4484727 tcccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaa 4484826  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  4484827 actagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtaaaatctcaaca 4484923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 30833204 - 30832920
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |     ||||| |||||||||| ||| |||| ||||||||||    
T  30833204 aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacga 30833105  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc 217  Q
    || ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  30833104 cctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggc 30833005  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30833004 atcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacat 30832920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 25409978 - 25410266
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||||||| || |||||| || ||||||| |||||||||| |     ||||| |||||||||| ||| |||| |||||    
T  25409978 cttcaaaatctgcacaagaacacttaaatatcatccttcctctgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaagg 25410077  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    |||||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||||| |||    
T  25410078 tacgaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctc 25410177  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  25410178 acggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaactcaaca 25410266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 3492092 - 3492377
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||| |     ||||| |||||||||| ||| |||| ||||||||    
T  3492092 caaaatctgcacaagaacacttaaatactagtcttccactgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtac 3492191  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||| ||||||||| ||||||||||||||||||||||   ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  3492192 gacctgtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 3492291  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  3492292 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 3492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 302
Target Start/End: Original strand, 40739173 - 40739458
Alignment:
Q  20 aaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||| |    |||||| |||||||| | ||| |||| |||||||||    
T  40739173 aaaaactgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacg 40739272  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacgg 216  Q
    ||| ||||||||| || |||||||||||||||||||| |||| ||||||| ||| | ||  ||||||||| |||||||||||||||||||||||||||||    
T  40739273 acctgtccttatcctgaaaacttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacgg 40739372  T
Q  217 catcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  40739373 cataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatctcaacat 40739458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 12647686 - 12647967
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  12647686 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 12647783  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||||||| || ||||||||    
T  12647784 accagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacg 12647883  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  12647884 gcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 27 - 292
Target Start/End: Complemental strand, 9296137 - 9295870
Alignment:
Q  27 gcacaagaacactt-aaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacgaccagt 122  Q
    |||||||||||||| |||||| || ||||| || |   |||||||||||||| |   ||||||| |||||||  ||||| || ||||||||| |||||||    
T  9296137 gcacaagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattttcagatcgtgtcacgatt--tgcgtccgacccaaggtatgaccagt 9296040  T
Q  123 ccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcac 222  Q
    |||||||| ||| |||||| ||||||||||   ||||||||||||||||||||  |||||| || ||||||||| ||||||||| ||||||||||| |      
T  9296039 ccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcacctt 9295940  T
Q  223 gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  9295939 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9295870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 20 - 292
Target Start/End: Original strand, 14291843 - 14292117
Alignment:
Q  20 aaaatctgcacaagaacact-taaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||  || |||| || ||||| || |  |||||||| |||||| |   ||||||| |||||||  ||||| |  |||||||||     
T  14291843 aaaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccagatcgtgtcacgatt--tgcgtacaacccaaggtat 14291940  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  |  |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||    
T  14291941 gaccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacg 14292040  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | ||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  14292041 gcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 11098581 - 11098395
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||  |||||||||||||||  || |||||||||||||||||  |||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  11098581 cccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 11098482  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||| |  ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  11098481 ctagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 28258938 - 28258713
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||| |||||||||||||| ||| ||| ||||   | ||||||||||| |||| | |    |||||| |||||||| ||||| || ||||||    
T  28258938 tcttcaaaatctacacaagaacacttatatagcagtcttcagttgataaaatcgtgccacgttttccaaatcgtgccacgattgatgcgtacgacccaag 28258839  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagct 211  Q
    |||||||||  ||||||| || ||||||||| |||||||||| |||||||||||||||||| || ||| ||| || |||||| |||||||||||||||||    
T  28258838 gtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagct 28258740  T
Q  212 cacggcatcacgaaatcgtgtcacgat 238  Q
    |||||||| || |||||||||||||||    
T  28258739 cacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 39811657 - 39811485
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||  ||| ||||       
T  39811657 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgcttacggtca 39811558  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  39811557 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 33528384 - 33528106
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||   |  ||||||||||||||| |    |  ||||||||||||||||||||| || ||||||    
T  33528384 cttcaaaatctgcacaagaacacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 33528285  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gc 210  Q
    |||||| ||  ||||||  || |||| || | |||||||||| ||||||||||||| ||||||| ||||||| || ||||  ||||||||||||||| ||    
T  33528284 gtacgatcaa-ccttattctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgc 33528186  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| || | |  ||||| ||  ||| ||   || | ||||||||||||| ||||||||||| |||||||||||||||||||    
T  33528185 tcactgcctga--aaatcatgatacgttgatgaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 33528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 34389188 - 34389380
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | |    ||||||||||||||||||||| || |||||||    
T  34389188 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacgacccaagg 34389287  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||||||  ||||||| || |||| || | |||||||||| ||||||||||||| ||||||| |||||||||| |||| | ||||||| ||||    
T  34389288 tacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaac 34389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 44310548 - 44310479
Alignment:
Q  223 gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  44310548 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44310479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 32247262 - 32247344
Alignment:
Q  209 gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||| | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  32247262 gctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32247344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 23078231 - 23077953
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| |||| |||   ||||| |||||||| | |    |||||| |||||||||||||| || ||||||     
T  23078231 cttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgttttccaaatcgtggcacgattggtgcgtacgacccaaga 23078132  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gct 211  Q
    ||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| ||||||| ||||||| ||  |||  ||||||| ||| ||| |||    
T  23078131 tacgaccaa-ccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctacaatccatgct 23078033  T
Q  212 cacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| || |   ||||||||| |||| ||   || ||||||||||||||| ||||||||||| |||| || |||||||||||    
T  23078032 cactgcct-gggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaa 23077953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 292
Target Start/End: Complemental strand, 10707013 - 10706734
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaag 111  Q
    ||||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | |    | |||| ||||||||||| || || ||||||    
T  10707013 tcttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaaccgtggcacgattggtgtgtacgacccaag 10706914  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg-caaacca-g 209  Q
    |||||||||  ||||||| |  |||| || | |||||||||| ||||||||||||| ||||||| ||||||| ||  |||  ||||||||  |||||| |    
T  10706913 gtacgaccaa-ccttatccttaaaacgtatccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacaattgagcaccctgagaaaccatg 10706815  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | || | |  |||||||| |||| ||   || ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  10706814 ctccctgcctga--aaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaa 10706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 39483282 - 39483492
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||||||||||||||||||  | |||||||||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| ||||||| ||||    
T  39483282 atcgtgacacgattggtgcgtaagacccaaggtacgacca-accttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatc 39483380  T
Q  181 gtgtcatgatttggcaccctg-caaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    ||| || ||||  ||||||||  |||||| |||| | || |   |||||||||  ||| ||   || ||||||||| ||||| ||||||||||| |||||    
T  39483381 gtgacacgattgagcaccctgaaaaaccatgctcgctgctt--ggaaatcgtgagacgttgatgaaatcgtgtcacaatttctctgttcttccaaaccac 39483478  T
Q  279 aaatttgaagccaa 292  Q
    ||||||||||||||    
T  39483479 aaatttgaagccaa 39483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 19344825 - 19345011
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||   ||||||    
T  19344825 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcac 19344924  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |   ||||| |||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  19344925 ggcatctc-cgatcgtatcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 19345011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 17865589 - 17865701
Alignment:
Q  87 acacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtca 186  Q
    ||||||||||||||| || |||||||||||||||  ||||||| || |||| || | |||||||||| ||||||||||||  ||||||| ||||||| ||    
T  17865589 acacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtgaca 17865687  T
Q  187 tgatttggcaccct 200  Q
    |||||  |||||||    
T  17865688 tgattgagcaccct 17865701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 2837221 - 2837339
Alignment:
Q  85 tgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgt 184  Q
    ||||||| ||||||||| || |||||||||||||||  ||||||| || ||||||| | |||||| | | ||||||||||||| ||||||| ||||||||    
T  2837221 tgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttacccagcaaggt-gaaaatcgtgtcacgttttcccaaaatcgtgt 2837318  T
Q  185 catgatttggcaccctgcaaa 205  Q
    || |||| | |||||||||||    
T  2837319 cacgattggacaccctgcaaa 2837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 8389909 - 8389632
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||| ||||||||||||| ||| ||||  |||  |||||||||||| | | |     ||| ||||| ||||||||||| || ||||||    
T  8389909 cttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaag 8389810  T
Q  112 gtacgaccagtccttatcatggaaa-cttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag- 209  Q
    ||||| |||  ||||||| || ||| | ||   |||||||||| ||||||||||||| ||||||| ||||||| || ||     ||||||||||| ||      
T  8389809 gtacgtccaa-ccttatcctgaaaaacgtactcagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgagaa--caccctgcaaatcata 8389713  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||| || |   |||||| || |||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  8389712 ctcactgcctg--gaaatcttgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 8389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 301
Target Start/End: Original strand, 19349683 - 19349868
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| | |||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||   ||||||    
T  19349683 gaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 19349782  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||| |   |||||||||||| ||||||||| | | ||||||| | ||||||||||| |||||||||||||| |||| | ||||||    
T  19349783 ggcatctc-cgatcgtgtcacgattgccaaatt-gcgacacgattcctctgttcttccaaaccacaaatttgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 292
Target Start/End: Original strand, 20522631 - 20522837
Alignment:
Q  84 gtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtg 183  Q
    |||||||||||||||||| || |||||||||||||||  ||||||| || |||| |  | |||||||| | ||||||||||||| |||| || |||||||    
T  20522631 gtgacacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacgtgcccagcaagtt-gaaaatcgtgtcacgttttctcaaaatcgtg 20522728  T
Q  184 tcatgatttggcaccctgcaaa-cca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 281  Q
     || ||||  |||||||| ||| ||| |||||  || |   ||||||||| |||| ||   || |  |||||||||||| ||||||||||| ||||||||    
T  20522729 acacgattgagcaccctgaaaaaccatgctcattgcctg--gaaatcgtgacacgttgatgaaattatgtcacgatttctctgttcttccaaaccacaaa 20522826  T
Q  282 tttgaagccaa 292  Q
    |||||||||||    
T  20522827 tttgaagccaa 20522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 28258724 - 28258669
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||    
T  28258724 tcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaaca 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 36757477 - 36757426
Alignment:
Q  241 caaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaa 36757426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 21630514 - 21630560
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  21630514 tcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaa 21630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 14698769 - 14698710
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacg 75  Q
    ||||||||||| |||||||||||||| ||| ||| |||| ||||  ||||||||||||||    
T  14698769 cttcaaaatctacacaagaacacttatatagcagtcttcaactatcaaaatcgtgtcacg 14698710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 29867602 - 29867491
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacg-atgccaaattcgtgtc 252  Q
    ||||||||||||| ||||||| |||||||||| |||| | ||||||| ||| || ||| || ||| | | |||||||||||||  ||||||| |||||||    
T  29867602 aaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctg-aaaacaactctcgacattaccaaaatcgtgtcacgcttgccaaa-tcgtgtc 29867505  T
Q  253 acgatttccctgtt 266  Q
    |||||||| |||||    
T  29867504 acgatttctctgtt 29867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 36757522 - 36757461
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   ||||||||||||||||    
T  36757522 cttcaaaatctgcacaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgat 36757461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 45099477 - 45099393
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc-atcacgaaatcgtgtcacgat 238  Q
    |||||||||||| |||||||| ||| |||||| |||| | ||||||  |||||||||| || | ||  |||||||||||||||||    
T  45099477 aaatcgtgtcacaatttcccaaaattgtgtcacgattggacaccctaaaaaccagctctcgacaataccgaaatcgtgtcacgat 45099393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 23198234 - 23198531
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcg 104  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |    |||||| |||||||||| ||| ||    
T  23198234 ccaactctcttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacgattggtacgtacg 23198333  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |  |||||||||| |||||||||||||||||    
T  23198334 tcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaa 23198433  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23198434 accagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacat 23198531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 23200433 - 23200730
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcg 104  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |    |||||| |||||||||| |||  |    
T  23200433 ccaactctcttcaaaatctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacgattggtacgtaag 23200532  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |  |||||||||| |||||||||||||||||    
T  23200533 tcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaa 23200632  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23200633 accagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacat 23200730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 800968 - 800685
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    |||| ||||||||||||||||||||  |||| || ||| |||||||||||||||||| |   |  |||| ||||||||||||||||||||||||  ||||    
T  800968 aaatatgcacaagaacacttaaatattagccctctactgataaaatcgtgtcacgatttccaggccgtgtcacgattggtgcgttcgtcccaagaaacga 800869  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc 217  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  800868 ccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggc 800769  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  800768 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 21 - 302
Target Start/End: Original strand, 7782450 - 7782713
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   ||||||| |||||||||| |||||||||||||| ||||    
T  7782450 aaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtacgttcgtcccaaggcacga 7782549  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc 217  Q
    |||||||||||||||||||||||||||||||||||||||||                     ||||||| ||||||||||||||||||||||||||| ||    
T  7782550 ccagtccttatcatggaaacttaacgagcaagtttgcaaat---------------------cgtgtcacgatttggcaccctgcaaaccagctcaccgc 7782628  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7782629 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaaatctcaacat 7782713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 82 - 302
Target Start/End: Original strand, 1306385 - 1306605
Alignment:
Q  82 tcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcg 181  Q
    ||||| |||||||||| ||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||||||  ||||    
T  1306385 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcg 1306484  T
Q  182 tgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 281  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||    
T  1306485 tgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccataaa 1306584  T
Q  282 tttgaagccaaatctcaacat 302  Q
    |||||||||||||||||||||    
T  1306585 tttgaagccaaatctcaacat 1306605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 33386421 - 33386137
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    ||||||||||||||||||||||||||||||| ||||  || ||||||||||| ||| || |    |||||| |||||||| | ||| || |||||| |||    
T  33386421 caaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaatttccaaatcgtgtcacgattgatacgtacgacccaagatac 33386322  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| |||||||||| |||||||||||||||| | || |||||||||| ||||||||||||||||||||||||||||    
T  33386321 gaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacg 33386223  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  33386222 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 12 - 301
Target Start/End: Original strand, 27453290 - 27453581
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtccc 108  Q
    |||||||||||| ||||||||||||||||||| || || |||| ||| ||||||||||| |||||| |    |||||| |||||||| | ||| |||| |    
T  27453290 ctctcttcaaaaactgcacaagaacacttaaaaactagtcttcaactgataaaatcgtgccacgatttccaaatcgtgtcacgattgatacgtacgtcac 27453389  T
Q  109 aaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||||||||||||  ||||||| || ||||||||| |||||||||| |||||||||||||||| | ||||||| ||||| ||||||||||||| |||||||    
T  27453390 aaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaacca 27453488  T
Q  209 gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||    
T  27453489 gctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatctcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 81 - 301
Target Start/End: Complemental strand, 26928300 - 26928080
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||| | |||  ||| |||||||||||| ||||||||| || |||||||||||||||||||| |||||||||||||||| | ||  ||     
T  26928300 atcgtgtcacgattgatacgtaagtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagatt 26928201  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26928200 gtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaa 26928101  T
Q  281 atttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||    
T  26928100 atttgaagccaaatctcaaca 26928080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 37726015 - 37726299
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    ||||||||||||||||||||||| ||| |||  | |  || ||||||||||| |||| | |    |||||| |||||||| | ||| || ||||| ||||    
T  37726015 caaaatctgcacaagaacacttatatagcagtttgcagctgataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaatgtac 37726114  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| | |||||||| |||||||||||||||| | || |||||||||| |||||| |||||||||||||||||||||    
T  37726115 gaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacg 37726213  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| |||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  37726214 gcatcacaaaatcgtgtcacgatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 37726299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 292
Target Start/End: Original strand, 8477729 - 8477994
Alignment:
Q  28 cacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacgaccagtcc 124  Q
    ||||||||||||||||||| |||||||| || |   |||||||||||||| |   ||||||| |||||||  ||||| |  ||||||||| |||||||||    
T  8477729 cacaagaacacttaaatactagccttcctctgaagcaatcgtgtcacgatttccagatcgtgtcacgatt--tgcgtacaacccaaggtatgaccagtcc 8477826  T
Q  125 ttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacga 224  Q
    |||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||| || |||||| ||||||||||| | |||    
T  8477827 ttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcga 8477926  T
Q  225 aatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  8477927 aatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaa 8477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 302
Target Start/End: Complemental strand, 37408322 - 37408035
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    ||||||||||| |||||||||||||| ||||||| ||||  |  |||||||| ||| ||||| |    |||||| |||||||| | ||| || |||||||    
T  37408322 cttcaaaatcttcacaagaacacttatataccagtcttcagcagataaaatcttgttacgatttccaaatcgtgccacgattgatacgtacgacccaagg 37408223  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||  ||||||| || ||||||||| | |||||||| ||||||||||||||||| | ||||||||| || |||||| ||||||||||||||||||    
T  37408222 tacgaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgatttac-acaatcgtgccacgatttgacaccctgcaaaccagctc 37408125  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||||  || ||||||||||||||||||| | |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  37408124 acggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaacat 37408035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 12 - 292
Target Start/End: Complemental strand, 40372546 - 40372264
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacact-taaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcc 107  Q
    |||||||  ||||||||||||||||||  || |||| || ||||| || |  ||||||||||||||| |   ||||||| |||||||  ||||| ||| |    
T  40372546 ctctcttacaaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtggcacgatt--tgcgtccgttc 40372449  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    | ||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||     
T  40372448 ccaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 40372349  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  40372348 agctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 40372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 32143662 - 32143884
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| || |||| ||| |||||||||||||||||| |    |||||| |||||||| | ||| |||| ||||||||    
T  32143662 caaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtac 32143761  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||||||||||| | ||  ||||||||| ||||||||||||||||||| ||||||||    
T  32143762 gacctgtccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacg 32143861  T
Q  216 gcatcacgaaatcgtgtcacgat 238  Q
    ||||||| |||||||||||||||    
T  32143862 gcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 114 - 301
Target Start/End: Complemental strand, 6716271 - 6716085
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||| ||||||||||| | ||||||    
T  6716271 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctca 6716172  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  6716171 cggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagac-aatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 116 - 301
Target Start/End: Complemental strand, 54634894 - 54634710
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||| |||||||||||   ||||||||    
T  54634894 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcacg 54634795  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| | |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  54634794 gcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 10058317 - 10058026
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  10058317 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtacgtcc 10058221  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  10058220 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 10058121  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  10058120 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa-ctcaacat 10058026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 10060539 - 10060248
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  10060539 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtacgtcc 10060443  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  10060442 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 10060343  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  10060342 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa-ctcaacat 10060248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 10062761 - 10062470
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  10062761 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtacgtcc 10062665  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  10062664 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 10062565  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  10062564 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa-ctcaacat 10062470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 10064983 - 10064692
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  10064983 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtacgtcc 10064887  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  10064886 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 10064787  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  10064786 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa-ctcaacat 10064692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 10067205 - 10066914
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  10067205 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtccgtcc 10067109  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  10067108 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 10067009  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  10067008 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa-ctcaacat 10066914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 10056095 - 10055812
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  10056095 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtccgtcc 10055999  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  10055998 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 10055899  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  10055898 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 25637294 - 25637013
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  25637294 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 25637197  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||||||| || ||||| ||    
T  25637196 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctctcg 25637097  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     || | ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  25637096 -cacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagac-aatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 21 - 302
Target Start/End: Original strand, 4598825 - 4599108
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  4598825 aaatctgcacaagaacacttaagtactagtcttcctctgtttcaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 4598922  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaa-tcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| || ||||| || ||||||   |||||||| || |||||||    
T  4598923 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcac 4599022  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  4599023 ggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacat 4599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 3617315 - 3617033
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  3617315 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 3617218  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    ||||| | |||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||   |||||||| || ||||||||    
T  3617217 accagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttgcacccctgcaaccctagctcacg 3617118  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  3617117 gcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 3617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 4601046 - 4601328
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  4601046 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 4601143  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaa-tcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| || ||||| || ||||||   |||||||| || |||||||    
T  4601144 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaaccctagctcac 4601243  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  4601244 ggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 7167688 - 7167874
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| |||||||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  7167688 cccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 7167787  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||| |  ||||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  7167788 ctagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaa 7167874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 22172846 - 22172670
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  ||  ||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||  |||||||    
T  22172846 gaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 22172747  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  22172746 gcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 18656844 - 18657021
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagct-cac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||||||||| ||||||||  |||||||||  ||| |||    
T  18656844 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcac 18656943  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  18656944 ggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaa 18657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 81 - 289
Target Start/End: Complemental strand, 27352298 - 27352092
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||  ||||| |||||||||||| |||||||||||||||  || | |||||||||||||||   ||||||||||||||||||||  |||    
T  27352298 atcgtgtcacgatt--tgcgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 27352201  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    ||| || |||||||    |||||||| ||||||||||| |  |||||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||    
T  27352200 gtgccacgatttggtgttctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaa 27352101  T
Q  281 atttgaagc 289  Q
    |||| ||||    
T  27352100 atttaaagc 27352092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 27986157 - 27986001
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||| | ||| || |||||| ||||||||  ||||||| || ||||||||| |||||||||| |||||||||||||||| | |||||||    
T  27986157 atcgtgtcacgattgatacgtacgacccaagatacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacacaatc 27986059  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgat 238  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27986058 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 28501332 - 28501160
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    ||||||||||| ||| |||||||||||||||||   |||||||||||||||| |||  |||||| || |||||||   ||||||||| ||||||||||      
T  28501332 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcacggccc 28501233  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28501232 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28501160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 28503499 - 28503327
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    ||||||||||| ||| |||||||||||||||||   ||| ||||||||||||||||  |||||| || ||||||||  || |||||| ||||||||||      
T  28503499 agtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtccagcaaactagctcacggccc 28503400  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28503399 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaa 28503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 302
Target Start/End: Complemental strand, 10211260 - 10210977
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  10211260 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 10211163  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||| ||||| |||| ||||||| || ||||||   |||||||| || | |||||    
T  10211162 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttgcacccctgcaaccctaactcac 10211063  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| | |||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||    
T  10211062 ggcatc-ctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagac-aatctcaacat 10210977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 106 - 254
Target Start/End: Complemental strand, 2671259 - 2671111
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||  |||||| || ||||||||| ||||||||    
T  2671259 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaa 2671160  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcac 254  Q
    | ||||||||||| |  |||||| ||||||||||||||| |||||||||    
T  2671159 ctagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 81 - 301
Target Start/End: Complemental strand, 10208996 - 10208778
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaat 179  Q
    |||||| |||||||  ||||| |||||||||| ||||||||||||||||| ||| | |||||||||||||||    ||||||||||||||| |||| |||    
T  10208996 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaat 10208899  T
Q  180 cgtgtcatgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    |||| || ||||||   |||||||| || | ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||||||| |||||    
T  10208898 cgtgccacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccac 10208800  T
Q  279 aaatttgaagccaaatctcaaca 301  Q
    |||||||||| | ||||||||||    
T  10208799 aaatttgaagac-aatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 27974701 - 27974477
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| ||||  || ||||||||||| ||| || |    ||| || |||||||| | ||| || |||||||    
T  27974701 cttcaaaatctgcacaagaacacttatataacagtcttcagctgataaaatcgtgccacaatttccaaatcatgtcacgattgatacgtacgacccaagg 27974602  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||| ||||  |||||||||| ||| ||||| |||||||||| ||||| ||||| |||||  |||||||||| || |||||| ||||||||||||||||||    
T  27974601 tacaaccaa-ccttatcatgaaaatttaaccagcaagtttgaaaatcatgtcaagatttaacacaatcgtgccacgatttgacaccctgcaaaccagctc 27974503  T
Q  213 acggcatcacgaaatcgtgtcacgat 238  Q
    ||||||| || |||||||||||||||    
T  27974502 acggcattacaaaatcgtgtcacgat 27974477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 292
Target Start/End: Original strand, 36029430 - 36029708
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgat----cgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   ||||| |||||||| | |  |    ||||||||||||||||||| || ||||||    
T  36029430 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaag 36029529  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gc 210  Q
    |||||||||  ||||||| || |||| || | |||||||||| ||||||||||||| ||| ||| ||||||| || ||||  ||||||||||||||| |     
T  36029530 gtacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattaagcaccctgcaaaccatgt 36029628  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    || | || | |  |||||||| |||| ||  ||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36029629 tcgctgcctga--aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 36029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 6718455 - 6718331
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||| ||||||||||| | ||||||    
T  6718455 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctca 6718356  T
Q  214 cggcatcacgaaatcgtgtcacgat 238  Q
    ||||| | |||||||||||||||||    
T  6718355 cggcaccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 301
Target Start/End: Original strand, 27038387 - 27038666
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcccaaggta 114  Q
    |||||||||||| |||||||||||||| ||| ||| ||||  ||   |||||||||||||| |      ||| |||||||||||||| || |||||||||    
T  27038387 tcttcaaaatctacacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt------gtggcacgattggtgcgtacgacccaaggta 27038480  T
Q  115 cgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctca 213  Q
    ||||||  ||||||| || |||| || | | |||||||| ||||||||||||  ||||||| ||||||| |||||||  ||||||||||||||| |||||    
T  27038481 cgaccaa-ccttatcctgaaaacatacccaacaagtttgaaaatcgtgtcacattttcccaaaatcgtgacatgattgagcaccctgcaaaccatgctca 27038579  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    | || |   |||||||||||||| ||   || ||||||||||||||| ||||| ||||| |||||||| |||||||||| | ||||||    
T  27038580 ctgcct-gggaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaaca 27038666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 45282854 - 45282628
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||| | ||| |||||||| ||  | ||||||||||||||| |     |||||| ||||||   ||||| |  ||    
T  45282854 ctctcttcaaa-tctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatc--tgcgtaccacc 45282759  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||  ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || ||||||||||| |     
T  45282758 caagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacct 45282659  T
Q  208 agctcacggcatcacgaaatcgtgtcacgat 238  Q
    ||||||||||| | |||||||||||||||||    
T  45282658 agctcacggcaccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 8738726 - 8738585
Alignment:
Q  97 tgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggca 196  Q
    ||||| ||| |||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||| ||     
T  8738726 tgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcg 8738627  T
Q  197 ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgat 238  Q
     ||||||||| ||||||||||| |  |||||| |||||||||    
T  8738626 tcctgcaaactagctcacggcaccttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 97 - 238
Target Start/End: Complemental strand, 9090964 - 9090823
Alignment:
Q  97 tgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggca 196  Q
    ||||| ||| |||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||| ||     
T  9090964 tgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcg 9090865  T
Q  197 ccctgcaaaccagctcacggcatcacgaaatcgtgtcacgat 238  Q
     ||||||||| ||||||||||| |  |||||| |||||||||    
T  9090864 tcctgcaaactagctcacggcaccttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 21711607 - 21711817
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||||||||||||| || |||||||||||||||  |||||||  | |||| ||   |||||||||| |||| |||||||| ||||||| ||||    
T  21711607 atcgtgacacgattggtgcgtacgacccaaggtacgaccaa-ccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaaatc 21711705  T
Q  181 gtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 279  Q
    ||| || ||||  |||||||| |||||| |||||| || |    |||||||| |||| ||   || ||||||||||||||| ||||||||||| ||||||    
T  21711706 gtgacacgattgagcaccctgaaaaccatgctcactgcctgga-aaatcgtgacacgttgaagaaatcgtgtcacgatttctctgttcttccaaaccaca 21711804  T
Q  280 aatttgaagccaa 292  Q
    |||||||||||||    
T  21711805 aatttgaagccaa 21711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 288
Target Start/End: Original strand, 27027042 - 27027318
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaag 111  Q
    ||||||||||||||||||||  ||||| ||| ||| ||||  ||   |||||||||||||| | |    | |||| |||||||||||||| || ||||||    
T  27027042 tcttcaaaatctgcacaagattacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaaacgtggcacgattggtgcgtacgacccaag 27027141  T
Q  112 gtacgaccagtccttatcatggaaact-taacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-g 209  Q
    |||||||||  ||||||| || ||| | || | |||||||||| ||||||||||||| ||||||| ||||||| || ||||  |||| |||||||||| |    
T  27027142 gtacgaccaa-ccttatcctgaaaaatgtagccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaaaccatg 27027240  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
    ||||| || |   |||||||||| ||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||    
T  27027241 ctcactgcctgg-gaaatcgtgttacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 30709546 - 30709267
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | |     ||||||||||||||||||||| || ||||||    
T  30709546 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaag 30709447  T
Q  112 gtacgaccagtccttatcatggaaa-cttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-g 209  Q
    ||| ||||| || ||||| || ||| | || | |||||||||| |||| |||||||| |||| || ||||||| || ||||   |||||||||||||| |    
T  30709446 gtaagaccaatc-ttatcctgaaaaacgtacccagcaagtttgaaaattgtgtcacgttttctcaaaatcgtgacacgattgaacaccctgcaaaccatg 30709348  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||  | | |  |||| ||| |||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  30709347 ctcactacctga--aaattgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 30709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 302
Target Start/End: Complemental strand, 39032304 - 39032016
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||| ||||||||||||||||| ||| ||  ||||  ||   |||||||||||||||| |    |||||| |||||||||||||| || |||||||    
T  39032304 cttcaaaaactgcacaagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacgattttcaaatcgtggcacgattggtgcgtacgacccaagg 39032205  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg-caaacca-gc 210  Q
    ||||||||  | ||||| || |||| || | |||||||||| ||||||||||||  ||||||| ||||||| || ||||  ||||||||  |||||| ||    
T  39032204 tacgacca-actttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgagaaaccatgc 39032106  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    || | || | |  |||||||| |||| ||   || ||||||||||||||| ||||||||||| || |||||||||||||||| | |||||||    
T  39032105 tccctgcctga--aaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaacat 39032016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 288
Target Start/End: Complemental strand, 40735218 - 40735018
Alignment:
Q  87 acacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaact-taacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtc 185  Q
    ||||||||||||||| || |||||||||||||||  ||||||| || ||| | || | |||||||||| ||||||||||||| ||||||| ||||||| |    
T  40735218 acacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaaatgtagccagcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgac 40735120  T
Q  186 atgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattt 284  Q
    | ||||  ||||||||||||||| |||||| || |   ||||||||| |||| ||   || ||||||||||||||  |||||| |||| |||||||||||    
T  40735119 acgattgagcaccctgcaaaccatgctcactgctt--ggaaatcgtgacacgttgatgaaatcgtgtcacgatttatctgttcatccaaaccacaaattt 40735022  T
Q  285 gaag 288  Q
    ||||    
T  40735021 gaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 2672603 - 2672425
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  | ||| |    
T  2672603 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2672504  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
    |||||| |  | ||||||||||||  |||| ||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  2672503 ggcatctccga-tcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 81 - 288
Target Start/End: Complemental strand, 40734293 - 40734087
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaact-taacgagcaagtttgcaaatcgtgtcacgatttcccacaat 179  Q
    ||||||||||||||| ||||| ||  ||||||||||||||  ||||||| || ||| | || | | |||||||| ||||||||||||| ||||||| |||    
T  40734293 atcgtgacacgattgatgcgtacgatccaaggtacgaccaa-ccttatcctgaaaaatgtagccaacaagtttgaaaatcgtgtcacgttttcccaaaat 40734195  T
Q  180 cgtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    |||| || ||||  ||||||||||||||| |||||| || |   ||||||||| || | ||   || ||||||||||||||| ||||||||||| |||||    
T  40734194 cgtgacacgattgagcaccctgcaaaccatgctcactgcttg--gaaatcgtgacatgttgatgaaatcgtgtcacgatttctctgttcttccaaaccac 40734097  T
Q  279 aaatttgaag 288  Q
    ||||||||||    
T  40734096 aaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 16264686 - 16264880
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||| ||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | |    |||||| |||||||||||||| |  |||||||    
T  16264686 cttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgctttccaaatcgtggcacgattggtgcgtaccacccaagg 16264785  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||||||||  ||||||| || |||| || | ||| |||||| ||||||||||||| ||||||| ||||||| || ||||  |||||||||||||||    
T  16264786 tacgaccaa-ccttatcctgaaaacgtacccagctagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 16264880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 2676759 - 2676581
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  ||  |||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  | ||| |    
T  2676759 gaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2676660  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
    | |||| |  | ||||||||||||  |||| ||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  2676659 gacatctccga-tcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 32143873 - 32143928
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  32143873 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 208
Target Start/End: Complemental strand, 8370239 - 8370044
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||| |||| ||| ||| ||||   |   |||||||||||||| | |    ||||||||||||||||||||| |  ||||||    
T  8370239 tcttcaaaatctgcacaagaacgcttatatagcagtcttcagttgtcaaaatcgtgtcacgttttccaaatcgtgacacgattggtgcgtacaacccaag 8370140  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    |||||||||  ||||||| |  |||| |  | ||||| |||| ||||||||||||| ||||||| ||||||| || ||||  |||||||||||||||    
T  8370139 gtacgaccaa-ccttatcctaaaaacgttcccagcaattttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaacca 8370044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 35925898 - 35926105
Alignment:
Q  83 cgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgt 182  Q
    |||| |||||||||||||| | || ||| |||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| |||| || | ||||    
T  35925898 cgtggcacgattggtgcgtacatctcaatgtacgaccaa-ccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttctcaaactcgt 35925996  T
Q  183 gtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 281  Q
    | || ||||  ||||||||||||||| |||||| || |   ||||||||| |||| ||   || ||||||||||||||| ||||||||||| ||| ||||    
T  35925997 gacacgattgagcaccctgcaaaccatgctcactgcct-gggaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaacc-caaa 35926094  T
Q  282 tttgaagccaa 292  Q
    |||||||||||    
T  35926095 tttgaagccaa 35926105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 6718342 - 6718287
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6718342 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 6718287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 27974488 - 27974433
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  27974488 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 45282639 - 45282585
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  45282639 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 1306300 - 1306358
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  1306300 caaaaactgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat 1306358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 26928346 - 26928288
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||    
T  26928346 caaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgat 26928288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 292
Target Start/End: Original strand, 48438552 - 48438831
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    ||||||||| |||||||||||||||| ||| ||| ||||  ||  ||||||||||||||| |    |  ||||||||||||||||||||| ||  |||||    
T  48438552 cttcaaaatttgcacaagaacacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaag 48438651  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa-cca-g 209  Q
    |||| ||||  ||||||| || |||| || | | |||||||| ||||||||||||| || |||| ||||||| || | ||  |||||||| ||| ||| |    
T  48438652 gtacaaccaa-ccttatcctgaaaacgtacccatcaagtttgaaaatcgtgtcacgtttccccaaaatcgtgacacggttgagcaccctgaaaaaccatg 48438750  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||   || |   ||||||||| |||| ||   || ||||||||||||||| |||||||| || ||||||||||| |||||||    
T  48438751 ctcgttgcttg--gaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaa 48438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 8738593 - 8738550
Alignment:
Q  249 tgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  8738593 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8738550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 9090831 - 9090788
Alignment:
Q  249 tgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  9090831 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9090788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 16264899 - 16264945
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  16264899 tcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaa 16264945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 24968520 - 24968596
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  |||||||||| |||||||||   ||||||||||||||||||||  |||||| || |||||    
T  24968520 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 24968596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 29812858 - 29812736
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| || |||||||||||||||  ||||||| || ||||||  | ||||||     ||||||||||||| ||||||| ||||    
T  29812858 atcgtgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttgcccagcaagacaa-aaatcgtgtcacgttttcccaaaatc 29812761  T
Q  181 gtgtcatgatttggcaccctgcaaa 205  Q
    |||||| |||| | |||||||||||    
T  29812760 gtgtcacgattggacaccctgcaaa 29812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 32475887 - 32475963
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||||||||| |||||    
T  32475887 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 32475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 32480745 - 32480821
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||||||||| |||||    
T  32480745 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 32480821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 47923584 - 47923457
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaa-cttaacgagcaagtttgcaaatcgtgtcacgatttcccacaat 179  Q
    ||||||||||||||| ||||| |  |||||||||||||||  ||||||| || ||| | || | |||||||||| ||||||||||||| ||||||| ||     
T  47923584 atcgtgacacgattgatgcgtacaacccaaggtacgaccaa-ccttatcctgaaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaaa 47923486  T
Q  180 cgtgtcatgatttggcaccctgcaaacca 208  Q
     ||| || ||||  |||||||||||||||    
T  47923485 tgtgacacgattgagcaccctgcaaacca 47923457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 5236761 - 5236869
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    ||||||||||||||||||||||||||||||  | ||| | | |   |||||||||||||| | ||    ||||||||||| ||||||||| || ||||||    
T  5236761 cttcaaaatctgcacaagaacacttaaatagtaccctgcaagtgtcaaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaag 5236860  T
Q  112 gtacgacca 120  Q
    |||||||||    
T  5236861 gtacgacca 5236869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 27986012 - 27985957
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||  ||||||||||||    
T  27986012 tcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaaatctcaaca 27985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 27986214 - 27986175
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaatacc 47  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  27986214 ccaactctcttccaaatctgcacaagaacacttaaatacc 27986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 1730959 - 1730917
Alignment:
Q  250 gtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaa 1730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 32475997 - 32476063
Alignment:
Q  226 atcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||| | || ||||| ||||||| | ||||||| ||| |||||||||||||||||||    
T  32475997 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 32476063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 32480855 - 32480921
Alignment:
Q  226 atcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||| | || ||||| ||||||| | ||||||| ||| |||||||||||||||||||    
T  32480855 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 32480921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 288
Target Start/End: Original strand, 8512643 - 8512815
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  8512643 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 8512742  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   ||||||||||||   |||| ||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  8512743 tgcctc-cctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 8512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 40592530 - 40592362
Alignment:
Q  17 ttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaagg 112  Q
    ||||||||||||||||||||||||| ||| | | ||||  ||   |||||||||||||| |    |  |||||||||||||||||| || ||  ||||||    
T  40592530 ttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaagg 40592431  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtg 183  Q
    ||||||||  ||||||| || |||| |  | |||||| ||| ||||||||||||| ||||||| |||||||    
T  40592430 tacgacca-accttatcctgaaaacgtgtccagcaag-ttgaaaatcgtgtcacgttttcccaaaatcgtg 40592362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 5258590 - 5258674
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacgat 238  Q
    ||||||||||||||||||||| |||||||||| |||| | | || || |||||||||| || ||| | | |||||||||||||||    
T  5258590 aaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccttgaaaaccagctctcgacattaccaaaatcgtgtcacgat 5258674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 8517523 - 8517599
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || |||||    
T  8517523 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 8517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 40592296 - 40592253
Alignment:
Q  249 tgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||| | ||||||||| |||||||||||||||||||    
T  40592296 tgtcacgatttctccgttcttccaaaccacaaatttgaagccaa 40592253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 40845224 - 40845279
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| ||||||| ||| | || |||||||||| ||||||||||||    
T  40845224 tcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 44331892 - 44331974
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacg 236  Q
    ||||||||||||| ||| ||| |||||||||| |||| | ||||||||||| ||  ||||||||||  |||||||||| ||||    
T  44331892 aaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgcaaaacatactcacggcattgcgaaatcgtgacacg 44331974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 266
Target Start/End: Original strand, 49200042 - 49200226
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||  ||||||||| || |||||||||||||||  ||||||| || |||| |  | ||||||   | ||||||||||||| || ||||  |||    
T  49200042 atcgtgacacatttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacatgcccagcaagcc-gaaaatcgtgtcacgtttccccaacatc 49200139  T
Q  181 gtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgtt 266  Q
    |||||| |||| | ||||||||||| || |||||||||||  | |||||||| ||||     ||| ||||||||||||||| |||||    
T  49200140 gtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacgcctgtaaaatcgtgtcacgatttctctgtt 49200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 6096263 - 6096316
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||||||||||||| ||||||| ||||||||||  ||| | ||||||||||||||    
T  6096263 aaatcgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaacca 6096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 21711554 - 21711583
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacactta 41  Q
    ||||||||||||||||||||||||||||||    
T  21711554 ctctcttcaaaatctgcacaagaacactta 21711583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 3393329 - 3393293
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatt 191  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  3393329 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 3393293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 201
Target Start/End: Original strand, 8127036 - 8127154
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| |||||| || || |||||| ||||||||  ||||||| || |||| || | |||||| ||| ||||||||||||  ||||||| ||||    
T  8127036 atcgtgacacggttggtgtgtacgacccaagatacgacca-accttatcctgaaaacgtacctagcaag-ttgaaaatcgtgtcacactttcccaaaatc 8127133  T
Q  181 gtgtcatgatttggcaccctg 201  Q
    ||| || ||||  ||||||||    
T  8127134 gtgacacgattgagcaccctg 8127154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 46173238 - 46173186
Alignment:
Q  156 aatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    |||||||||| | ||||||| |||||||||| |||| | ||||||||||||||    
T  46173238 aatcgtgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaacca 46173186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 8 - 301
Target Start/End: Original strand, 3073047 - 3073343
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |   |||||||  |||||| |||| | |     
T  3073047 ccaactctcttccaaatctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccagatcgtgtaacgattagtgcatcca 3073146  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |     
T  3073147 tcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtag 3073246  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  3073247 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 411981 - 411685
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat---ctgatcgtgacacgattggtgcgttcg 104  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||   ||||| ||| |||||||||||| | ||    
T  411981 ccaactcccttcaaa-tctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcctgattgtgtcacgattggtgcatccg 411883  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgca-aatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgca 203  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  411882 tcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgca 411783  T
Q  204 aaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     || ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  411782 gactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaaca 411685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 22709360 - 22709645
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |     ||||| ||||||| ||  || |||| ||||||||    
T  22709360 caaaatctgcacaagaacacttaaatactagtcttccactaataaaatcgtgtcacgatttccaagtcgtgtcacgatttgtatgtacgtcacaaggtac 22709459  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| |    
T  22709460 gaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatg 22709559  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  22709560 gcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 5674520 - 5674229
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacactt-aaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcc 107  Q
    ||||| || |||||||||||||||||||| |||||| |||||||| || ||| |||||||||||||| |   ||||||| |||||||  ||||| |||||    
T  5674520 ctctcctccaaatctgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgatttccagatcgtgtcacgatt--tgcgtacgtcc 5674423  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||  || |||||| ||||||||||||||||||||    
T  5674422 caaggtatgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc 5674323  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  5674322 agctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 2171840 - 2172104
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcccaaggtacgacca 120  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||                |||| ||| |||| ||||||||||||     
T  2171840 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgat----------------tggtacgtacgtcacaaggtacgacct 2171923  T
Q  121 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatc 220  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  2171924 gtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatc 2172023  T
Q  221 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  2172024 acgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 81 - 301
Target Start/End: Original strand, 6097787 - 6097986
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||                     |    
T  6097787 atcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaat---------------------c 6097865  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  6097866 gtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaaccacaa 6097965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 34166956 - 34166665
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  34166956 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtacgtcc 34166860  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||||||||| ||||||   |||||||| |    
T  34166859 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaacc 34166760  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  34166759 ctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaa-ctcaacat 34166665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 114 - 301
Target Start/End: Complemental strand, 27647654 - 27647467
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||  ||||| ||| |||||||||||||||||    |||||||||||||||| |||||||||| || ||||| ||||||||||| | ||||||    
T  27647654 acgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctca 27647555  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| | ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  27647554 cggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaaactcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 136 - 292
Target Start/End: Complemental strand, 30125182 - 30125026
Alignment:
Q  136 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 235  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||| || ||||||||  ||||||||| ||||||||||| | ||||||||||||||    
T  30125182 acttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcac 30125083  T
Q  236 gatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  30125082 gatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30125026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 114 - 301
Target Start/End: Original strand, 16578915 - 16579101
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||| ||||||||||| | ||||||    
T  16578915 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctca 16579014  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  16579015 cggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 114 - 301
Target Start/End: Complemental strand, 16616465 - 16616279
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||| ||||||||||| | ||||||    
T  16616465 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctca 16616366  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  16616365 cggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 103 - 301
Target Start/End: Original strand, 6136350 - 6136547
Alignment:
Q  103 cgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgc 202  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || |||||    ||||||    
T  6136350 cgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgc 6136449  T
Q  203 aaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    || || ||||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  6136450 aaccctagctcacggcatc-cgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 301
Target Start/End: Original strand, 33342398 - 33342688
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  33342398 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtccgtcc 33342494  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaa-tcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| || ||||| || ||||||   |||||||| |    
T  33342495 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttgcacccctgcaacc 33342594  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    | ||||||||||||| |||||||| ||| |||| ||||| |||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||    
T  33342595 ctagctcacggcatc-cgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagac-aatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 11857387 - 11857559
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  |  |||||||||||||||||  |||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||||      
T  11857387 agtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 11857486  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  11857487 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 11857559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 293
Target Start/End: Complemental strand, 34164734 - 34164451
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  34164734 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatt--tgcgtccgtcc 34164638  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| ||||||| || ||||||   |||||||| |    
T  34164637 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaacc 34164538  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    | | ||||||||||| |||||||| |||||||| ||| | |||||||||||||||||||||||||||  |||||||||||||| ||||    
T  34164537 ctaactcacggcatc-cgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 34164451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 81 - 302
Target Start/End: Original strand, 23896738 - 23896958
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||| | ||| || || ||||||||||||  ||||||| || ||||||||| |||||||||  |||||||||||||||||| || ||||    
T  23896738 atcgtgccacgattgatacgtacgaccgaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatc 23896836  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    ||  || |||||| |||||||||||||| ||||||  || || ||||||||||||||||||||| ||||||||||||||  |||||||| || |||||||    
T  23896837 gtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaa 23896936  T
Q  281 atttgaagccaaatctcaacat 302  Q
    |||||||| ||||| |||||||    
T  23896937 atttgaaggcaaatttcaacat 23896958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 97 - 301
Target Start/End: Complemental strand, 25421000 - 25420797
Alignment:
Q  97 tgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggca 196  Q
    ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||       
T  25421000 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcac 25420901  T
Q  197 ccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatc 295  Q
    |||||||| || ||||||||||||| ||||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  25420900 ccctgcaaccctagctcacggcatc-cgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatc 25420803  T
Q  296 tcaaca 301  Q
    ||||||    
T  25420802 tcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 114 - 302
Target Start/End: Complemental strand, 16554640 - 16554453
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| ||  |||| |||||||| || | ||||||    
T  16554640 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctca 16554541  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||| | ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  16554540 cggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 16554453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 114 - 302
Target Start/End: Complemental strand, 16631196 - 16631009
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| ||  |||| |||||||| || | ||||||    
T  16631196 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctca 16631097  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||| | ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  16631096 cggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 16631009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 81 - 293
Target Start/End: Complemental strand, 13151067 - 13150856
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaat 179  Q
    |||||| |||||||  ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||    
T  13151067 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaat 13150970  T
Q  180 cgtgtcatgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    ||||||| ||||||   |||||||| || | ||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||  ||||    
T  13150969 cgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccac 13150871  T
Q  279 aaatttgaagccaaa 293  Q
    |||||||||| ||||    
T  13150870 aaatttgaagacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 22010382 - 22010197
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||| |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  22010382 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 22010284  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | | || |||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  22010283 ctaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 22010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 14742106 - 14741934
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || |||||||||||||||||   |||||||||||||||| |||  |||||| || ||||||||  ||||||||| |||||||| |      
T  14742106 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacca 14742007  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  14742006 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 301
Target Start/End: Complemental strand, 26253843 - 26253589
Alignment:
Q  29 acaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtcct 125  Q
    |||||||||||||||||| || || | ||| ||||||||||| |||||| |    |||||| |||||||| | ||| |||| ||| ||||||||||||||    
T  26253843 acaagaacacttaaatacaagtctccaactgataaaatcgtgccacgatttccaaatcgtgtcacgattgatacgtacgtcacaaagtacgaccagtcct 26253744  T
Q  126 tatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaa 225  Q
    |||| || ||||||||| |||||||||| ||||||||||||||                     ||||||||||||| ||| | ||||||| ||||| ||    
T  26253743 tatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacga---------------------tttggcaccctgctaactatctcacggtatcacaaa 26253665  T
Q  226 atcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  26253664 atcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 5757235 - 5756951
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||| ||||||||  || ||| ||||  || ||||||||||| |||| | |    |||||| |||||||| | | | || || |||||||    
T  5757235 caaaatctgcacaaaaacacttatttagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgccacgattgatacatacgaccaaaggtac 5757136  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| |||||||||| |||||||||||||||||| || ||||||  || |||||| |||||||||||||| ||||||    
T  5757135 gaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacg 5757037  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     ||| || |||| |||||||||||||| | ||||||||| ||||| || |||||  | |||| |||||| ||||||||| ||||||    
T  5757036 acattacaaaattgtgtcacgatgccacaatcgtgtcacaatttctctattcttttaaaccataaatttaaagccaaatttcaaca 5756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 6027123 - 6026833
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  6027123 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 6027027  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| |||||| |||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||   |||||||| ||    
T  6027026 caaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccc 6026927  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     ||||| || || | |||||||||||||| |||||  | |||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||    
T  6026926 tagctctcg-cacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagac-aatctcaacat 6026833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 31086234 - 31085954
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg-----atcgtgacacgattggtgcgttcgtcccaa 110  Q
    |||||||||||||||||||||||||| ||| ||| ||||  |||  |||||||||||||| | |      ||||||||||||||||||||| || |||||    
T  31086234 cttcaaaatctgcacaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaa 31086135  T
Q  111 ggtacgaccagtccttatcatggaaa-cttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca- 208  Q
    ||||||||||  ||||||| || ||| | || | |||||||||| ||||||||||||| ||| ||| ||||||| || ||||  |||||||||||||||     
T  31086134 ggtacgaccaa-ccttatcctgaaaaacgtacctagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaccat 31086036  T
Q  209 gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||| || |   |||||| || |||| ||   || ||||||||||||||| ||||||||| | |||||||||||||||||||    
T  31086035 gctcactgcctg--gaaatcatgacacgctgatgaaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaa 31085954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 5266480 - 5266610
Alignment:
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||||| ||||||||||||||| ||| |||||| ||||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||     
T  5266480 caaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 5266579  T
Q  208 agctcacggcatcacgaaatcgtgtcacgat 238  Q
    ||||||||||| | |||||||||||||||||    
T  5266580 agctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 292
Target Start/End: Complemental strand, 5017187 - 5016977
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaact-taacgagcaagtttgcaaatcgtgtcacgatttcccacaat 179  Q
    ||||||||||||||||||||| || |||||||||||||||  ||||||| || ||| | || | || ||||||| ||||||||||||| |||| || |||    
T  5017187 atcgtgacacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaaatgtacccagtaagtttgaaaatcgtgtcacgttttctcaaaat 5017089  T
Q  180 cgtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    |||| || ||||  ||||||||||||||| |||||| || |   ||||||||| |||| ||   || ||||||||||||||  ||||||||||| |||||    
T  5017088 cgtgacacgattgagcaccctgcaaaccatgctcactgcttg--gaaatcgtgacacgttgatgaaatcgtgtcacgatttttctgttcttccaaaccac 5016991  T
Q  279 aaatttgaagccaa 292  Q
    ||||||||||||||    
T  5016990 aaatttgaagccaa 5016977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 6438899 - 6439075
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||  ||| || ||||||  | |||||    
T  6438899 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcac 6438998  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| | | || |||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||||||||||||||    
T  6438999 ggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaa 6439075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 81 - 292
Target Start/End: Complemental strand, 10076882 - 10076673
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||||||||||||| || |||||||||||||||  ||||||| || |||| |||  ||||||||   ||||||| ||||| ||||||| ||||    
T  10076882 atcgtgacacgattggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacgtaatcagcaagttaa-aaatcgtatcacgttttcccaaaatc 10076785  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    || |||||||| ||||||||||||| |||||| || |||  | |||||||| |||| ||   || || |||||||||||  |||||||| || | |||||    
T  10076784 gtatcatgattgggcaccctgcaaaacagctctcgacattgcaaaatcgtgacacgctgatgaaatcatgtcacgatttttctgttctttcaaaacacaa 10076685  T
Q  281 atttgaagccaa 292  Q
    |||| |||||||    
T  10076684 atttaaagccaa 10076673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 16839146 - 16839332
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  | |||||    
T  16839146 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 16839245  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |  | ||||||||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  16839246 ggcatctccga-tcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 16839332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 18234420 - 18234608
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||| ||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| |    |  ||||||||||||||||||||| || ||||||    
T  18234420 cttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 18234519  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg 201  Q
    |||||||||  ||||||| || |||| || | |||||||||| ||||||| ||||| ||||||| |||| || || ||||  ||||||||    
T  18234520 gtacgacca-accttatcctgaaaacgtacccagcaagtttgaaaatcgtatcacgttttcccaaaatcctgacacgattgagcaccctg 18234608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 25421172 - 25420999
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     ||| || |||||||  ||||| |||||||||| |||    
T  25421172 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcatgtcacgatt--tgcgtccgtcccaaggaacg 25421075  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttg 193  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| || ||||| ||||| ||||||    
T  25421074 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcc-caatcatgtcacgatttg 25420999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 302
Target Start/End: Complemental strand, 33330117 - 33329931
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  | |||||    
T  33330117 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33330018  T
Q  215 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |  | |||||||||||| ||||||| || | ||||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  33330017 ggcatctccga-tcgtgtcacgattgccaaat-cgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 33329931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 34151917 - 34151835
Alignment:
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    ||||||||||| |||||||| |||||||| ||| | |||||||||||||||||||||||||||  |||||||||||||| ||||    
T  34151917 ctcacggcatc-cgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa 34151835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 14737246 - 14737128
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || |||||||||||||||||   |||||||||||||||| |||  |||||| || ||||||||  ||||||||| ||||||||||      
T  14737246 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 14737147  T
Q  220 cacgaaatcgtgtcacgat 238  Q
    |  ||||||||||||||||    
T  14737146 cttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 16652883 - 16652759
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    || |||||||||||| ||  ||||||  || || || ||||||| ||| | ||||||    
T  16652883 acgaccagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctca 16652784  T
Q  214 cggcatcacgaaatcgtgtcacgat 238  Q
    ||||| | |||||||||||||||||    
T  16652783 cggcaccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 302
Target Start/End: Complemental strand, 33335614 - 33335428
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||   ||||||    
T  33335614 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33335515  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |   |||||||||||| ||||||| ||| |  |||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  33335514 ggcatctc-cgatcgtgtcacgattgccaaa-tcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 33335428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 5266599 - 5266645
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  5266599 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 5266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 14737139 - 14737093
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  14737139 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 14737093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 6097743 - 6097799
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||| || ||||| || ||||||||||||||||||    
T  6097743 aaatctgcacaagaacacttaaatactagtcttcccctgataaaatcgtgtcacgat 6097799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 16652770 - 16652715
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  16652770 tcgtgtcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaacat 16652715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 301
Target Start/End: Original strand, 6005822 - 6006007
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||   |||||     
T  6005822 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcat 6005921  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||| |   |||||||||||| ||||||| ||| | ||||||| | ||||| ||||| ||||||||||||||||||| | ||||||    
T  6005922 ggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaaca 6006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 28155255 - 28155133
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||    |||||||||||||||||||  |||||| || ||||| |||||||||||||   ||||||    
T  28155255 gaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac 28155156  T
Q  215 ggcatcacgaaatcgtgtcacgat 238  Q
    |||||| | | |||||||||||||    
T  28155155 ggcatctc-agatcgtgtcacgat 28155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 5343990 - 5344056
Alignment:
Q  226 atcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||| | || ||||| ||||||||| ||||||| ||| |||||||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaa 5344056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 28155144 - 28155098
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||    
T  28155144 tcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 28155098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 5343880 - 5343956
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||||||||| |||||    
T  5343880 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 5343956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 21272514 - 21272470
Alignment:
Q  248 gtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||||||||| |||| | |||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaa 21272470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 3809369 - 3809452
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgat 238  Q
    ||||||||||||| || |||| |||||||||| |||| |||||||| | || |||||| || |||  | |||||||||||||||    
T  3809369 aaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcacccttcgaaacagctctcgacattgcaaaatcgtgtcacgat 3809452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 24714941 - 24714998
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccac-aaatttgaagccaaatctcaacat 302  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||||| | |||||||    
T  24714941 tcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaacat 24714998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 40282250 - 40281958
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat---ctgatcgtgacacgattggtgcgttcgtccc 108  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||   ||||||||| |||||||||||| | ||||||    
T  40282250 ctctcttcaaa-tctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcctgatcgtgtcacgattggtgcatccgtccc 40282152  T
Q  109 aaggtacgaccagtccttatcatggaaacttaacgagcaagtttgca-aatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| |     
T  40282151 aaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacct 40282052  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  40282051 agctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 9987068 - 9986785
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||| |||||||||| |   ||||||| |||||||||||| | |||||||||||| ||    
T  9987068 aaatctgcacaagaacacttaaatactagccctccactgataaaattgtgtcacgatttccagatcgtgtcacgattggtgcatccgtcccaaggtatga 9986969  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggc 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||    
T  9986968 ccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcagaccagctcacggc 9986869  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    | ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9986868 accacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 21053823 - 21053540
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat---ctgatcgtgacacgattggtgcgttcgtcccaaggtacga 117  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||   ||||||||| |||||||||||| | |||| ||||||| ||    
T  21053823 aaatctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcctgatcgtgtcacgattggtgcatccgtctcaaggtatga 21053724  T
Q  118 ccagtccttatcatggaaacttaacgagcaagtttgca-aatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacgg 216  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||  | ||||||| |    
T  21053723 ccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactg 21053624  T
Q  217 catcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  21053623 caccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 19366053 - 19365768
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |     ||||| |||||||||| ||| |||| ||| ||||    
T  19366053 caaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaatgtac 19365954  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  19365953 gacctgtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 19365854  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19365853 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 51765267 - 51764990
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||                |||| ||| ||||     
T  51765267 ccaactcccttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgat----------------tggtacgtacgtca 51765184  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||| ||||||||||||||||||||    
T  51765183 caaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc 51765084  T
Q  208 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  51765083 agctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaaca 51764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 302
Target Start/End: Complemental strand, 19361178 - 19360911
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcccaaggtacgac 118  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||                |||| ||| |||| |||||||||||    
T  19361178 caaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat----------------tggtacgtacgtcacaaggtacgac 19361095  T
Q  119 cagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggca 218  Q
    | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  19361094 ctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggca 19360995  T
Q  219 tcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  19360994 tcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacat 19360911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 106 - 302
Target Start/End: Original strand, 20622626 - 20622822
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  20622626 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaga 20622725  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20622726 ctagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacat 20622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 24202522 - 24202250
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtccc 108  Q
    |||||| |||||| ||||||||||||||||||||| |||||||| || ||| |||||||||||||| |   ||||||| ||||||| |  ||| ||||||    
T  24202522 ctctctccaaaatatgcacaagaacacttaaatactagccttcctctgatacaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtgcgtccc 24202423  T
Q  109 aaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||| || ||||||||||||||| ||| |||||||||||||||||| ||||                     ||||||| |||||||||||||||||||||    
T  24202422 aagatatgaccagtccttatcaaggatacttaacgagcaagtttgaaaat---------------------cgtgtcacgatttggcaccctgcaaacca 24202344  T
Q  209 gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24202343 gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacat 24202250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 302
Target Start/End: Complemental strand, 13604379 - 13604094
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||| |||||||||||||||| ||| ||| ||||  || ||||||||||| |||| | |    |||||| |||||||| | ||| || ||||||||||    
T  13604379 caaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtac 13604280  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| |||||||||| ||||| |||||||||| | || |||||||||| |||||| ||| |||||||||||||||||    
T  13604279 gaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacg 13604181  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     |||||| |||||||| |||||| ||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  13604180 acatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaacat 13604094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 44203499 - 44203218
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  44203499 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 44203402  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||   |||||||| || ||||||||    
T  44203401 accagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcacg 44203302  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| | | || |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  44203301 gcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 114 - 302
Target Start/End: Complemental strand, 9036189 - 9036002
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||  || ||| ||| || || || ||||||||||| | ||||||    
T  9036189 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctca 9036090  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  9036089 cggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 9036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 116 - 293
Target Start/End: Original strand, 41391002 - 41391178
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||| ||||||||||   |||| |||||||||||||||  |||||| || ||||||||  |||||||||  |||||||    
T  41391002 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 41391101  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    ||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41391102 gcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 39445898 - 39446074
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || |||||||||||||||||    ||||||||| |||||||||  |||||| || ||||||||  |||||||||  | |||||    
T  39445898 gaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 39445997  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||| | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  39445998 ggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39446074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 44023561 - 44023385
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||| || ||||||   ||||||    
T  44023561 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 44023462  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| | |  |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  44023461 ggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 44023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 292
Target Start/End: Complemental strand, 26644656 - 26644382
Alignment:
Q  17 ttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggt 113  Q
    ||||||||||||| ||||||||||| ||| ||| ||||  || ||||||||||| |||| | |    |||||| |||||||||||||| || ||||   |    
T  26644656 ttcaaaatctgcataagaacacttatatagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgccacgattggtgcgtacgaccca---t 26644560  T
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    |||||| | ||||||  || |||  || | | |||||||| ||||||||||||| |||| || ||||||| || |||||| |||| ||||||||||||||    
T  26644559 acgacc-gaccttattctgaaaaggtacccaacaagtttgaaaatcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccagctca 26644461  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
     | ||| || ||||||||| |||||| |||| |||| |||||||| | ||||||||||| ||||||||||| |||||||    
T  26644460 tgacattacaaaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaa 26644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 1054698 - 1054522
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||   ||||||    
T  1054698 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 1054599  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| | |  |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  1054598 ggcacctc-caatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaa 1054522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 25439583 - 25439407
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||    |||||||||||||||||||  |||||| || ||||| ||| |||||||||  | |||||    
T  25439583 gaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcac 25439484  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||| | |||||||||||||||  | || ||||||||||||| | |||||||||||||||||||||||||||||||    
T  25439483 ggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25439407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 106 - 238
Target Start/End: Complemental strand, 24793841 - 24793709
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||  ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  24793841 cccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 24793742  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgat 238  Q
    | ||||||||||| | |||||||||||||||||    
T  24793741 ctagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 25444776 - 25444600
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccag-ctcac 214  Q
    |||||||||||||||  || ||||||| | |||||||    |||||||||||||||||||  |||||| || ||||| ||| ||| |||||  | |||||    
T  25444776 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcac 25444677  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||| | |||||||||||||||  | || ||||||||||||| | |||||||||||||||||||||||||||||||    
T  25444676 ggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaa 25444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 49712087 - 49712025
Alignment:
Q  302 tgacaccttgctacaatccattgcacgacaaccagattagaactataatactctaactgttag 364  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49712087 tgacaccttgctacaatccattgcacgacaatcagattagaactataatactctaactgttag 49712025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 24787019 - 24786907
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||  ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  24787019 cccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 24786920  T
Q  206 ccagctcacggca 218  Q
    | |||||||||||    
T  24786919 ctagctcacggca 24786907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 81 - 301
Target Start/End: Original strand, 37070173 - 37070392
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||||||||| || |||||||||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| ||||||| ||||    
T  37070173 atcgtggcacgattggtgcgtacgacccaaggtacgacca-accttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaatc 37070271  T
Q  181 gtgtcatgatttggcaccctg-caaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    ||| || ||||  ||||| ||  |||||| |||| | || | |  |||||||| |||| ||   || ||||||||||||||| ||||||||||| |||||    
T  37070272 gtgacacgattgagcaccttgagaaaccatgctccctgcctga--aaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccac 37070369  T
Q  279 aaatttgaagccaaatctcaaca 301  Q
    ||||||||| |||| | ||||||    
T  37070370 aaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 238
Target Start/End: Original strand, 41398657 - 41398778
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||| ||||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||  |||||||    
T  41398657 gaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 41398756  T
Q  216 gcatcacgaaatcgtgtcacgat 238  Q
    ||||| | |||||||||||||||    
T  41398757 gcatctc-aaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 292
Target Start/End: Original strand, 13598737 - 13599016
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||| ||| ||| ||| ||||  ||   |||||||||||||| |    |  || |||||||||||||||||| || ||||||    
T  13598737 cttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaag 13598836  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg-caaacca-g 209  Q
    |||||||||  ||||||| || |||| || | |||||||||| ||||||||||||  ||||||| |||| || || ||||    ||| ||  |||||| |    
T  13598837 gtacgacca-accttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcatgacacgattgaataccttgaaaaaccatg 13598935  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | ||  |  ||||||||| |||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13598936 ctcgctgc--ctagaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 13599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 19358589 - 19358531
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  19358589 caaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat 19358531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 3282044 - 3282331
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||| ||||||||||| ||| ||| ||||  ||   |||||||||||||| | |    |||||| |||||||||||||| || |||||||    
T  3282044 cttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttcaaatcgtggcacgattggtgcgtacgacccaagg 3282143  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg-caaacca-gc 210  Q
    || |||||  ||||||| || |||| || | |||||||||| ||||||||||||| |||| || ||||||| || ||||  ||||| ||  ||||||  |    
T  3282144 tatgaccaa-ccttatcttgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttctcaaaatcgtgacacgattgagcaccttgaaaaaccatac 3282242  T
Q  211 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    || | || | |  || ||||| |||| ||   || ||||||||||||||  ||||||||||  ||||||||||||||||||||| ||||||    
T  3282243 tccctgcctga--aattcgtgacacgttgatgaaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 21536189 - 21536119
Alignment:
Q  224 aaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
    ||||||||||||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 21536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 24793720 - 24793674
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24793720 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24793674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 21536330 - 21536177
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | |    |||| | |||||||||||||| || |||||||    
T  21536330 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttccaaatcggggcacgattggtgcgtacgacccaagg 21536231  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacg 167  Q
    ||||||||  ||| ||| || |||| || | |||||||||| |||||||||||||    
T  21536230 tacgacca-acctcatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacg 21536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 41398767 - 41398814
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  41398767 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 20762394 - 20762310
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacgat 238  Q
    ||||||||||||||||||||| |||||||||| |||| | | ||||| |||||||||| || ||| | | |||||||||||||||    
T  20762394 aaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 20762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 31659033 - 31658904
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| || |||||||||| ||||  ||||||| || ||||||  | ||||||     |||| |||||||| ||||||| ||||    
T  31659033 atcgtgacacgtttggtgcgtacgacccaaggtacaaccaa-ccttatcctgaaaactttcccagcaagcaaa-aaattgtgtcacgttttcccaaaatc 31658936  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctc 212  Q
    |||||| |||| ||||||||||||| ||||||    
T  31658935 gtgtcacgattgggcaccctgcaaaacagctc 31658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 49918144 - 49918015
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||||||||||||||| || || ||||||||| |||||  ||||||| || |||| |  | ||||||||   ||||||||||||| ||| | | ||||    
T  49918144 atcgtgacacgattggtgtgtacgacccaaggtatgaccaa-ccttatcctgaaaacgtgcccagcaagttaa-aaatcgtgtcacgtttttcgaaaatc 49918047  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctc 212  Q
    |||||| |||| ||||||||||||| ||||||    
T  49918046 gtgtcacgattgggcaccctgcaaaacagctc 49918015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 28220672 - 28220722
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||||||| ||||||| |||||||||| |||| |||||||||||||    
T  28220672 aaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 28223867 - 28223917
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||||||| ||||||| |||||||||| |||| |||||||||||||    
T  28223867 aaatcgtgtcacgttttcccaaaatcgtgtcacgattgggcaccctgcaaa 28223917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 3156590 - 3156540
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| | | ||||||| |||||||||| ||||||||||||||||||    
T  3156590 aaatcgtgttatgttttcccaaaatcgtgtcacgatttggcaccctgcaaa 3156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 44455023 - 44454846
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    ||||||||||||||||||||||||||||||  | ||| | |||   ||||||||| |||| | ||    ||||||||||| || |||||| || ||||||    
T  44455023 cttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcgtgccacgttttgccaaatcgtgacacgtttagtgcgtacgacccaag 44454924  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatt 191  Q
    |||| ||||  ||||||| || ||||||  | ||||||   | ||||||||||||| || |||| |||||||||| ||||    
T  44454923 gtacaacca-accttatcttgaaaacttgcccagcaag-ccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgatt 44454846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 43988133 - 43988057
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  || ||||||| |||||||||   |||||||||||||||| |||  |||||| || |||||    
T  43988133 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattt 43988057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 2627614 - 2627318
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcg 104  Q
    ||||||||| |  |||||||||||||||||||||||||| |||| ||||   |||||||||||||||||| |   ||||||| ||| | |||||||| ||    
T  2627614 ccaactctccttcaaatctgcacaagaacacttaaatactagccctccaacgataaaatcgtgtcacgatttacagatcgtgtcacaaatggtgcgtacg 2627515  T
Q  105 tcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaa 204  Q
    || ||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  2627514 tcacaagaaacgaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaa 2627415  T
Q  205 accagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2627414 accagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 26288232 - 26288517
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |   | ||||||||| |||||  ||| |||| ||||||||    
T  26288232 caaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtac 26288331  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  || |||||| ||||||||||||||||||||||||||||    
T  26288332 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacg 26288431  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26288432 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaaca 26288517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 26301489 - 26301774
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |   | ||||||||| |||||  ||| |||| ||||||||    
T  26301489 caaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtac 26301588  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  || |||||| ||||||||||||||||||||||||||||    
T  26301589 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacg 26301688  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26301689 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaaca 26301774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 26313483 - 26313768
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |   | ||||||||| |||||  ||| |||| ||||||||    
T  26313483 caaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtac 26313582  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  || |||||| ||||||||||||||||||||||||||||    
T  26313583 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacg 26313682  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26313683 gcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaaca 26313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 27 - 301
Target Start/End: Complemental strand, 1261692 - 1261414
Alignment:
Q  27 gcacaagaacactt-aaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacgaccagt 122  Q
    |||||||||||||| |||||| |||||||| || |||||||||||||||||| |   ||||||| ||||||| |  |||  ||||||||||| |||||||    
T  1261692 gcacaagaacactttaaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtatgtcccaaggtatgaccagt 1261593  T
Q  123 ccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcac 222  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||    
T  1261592 ccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcac 1261493  T
Q  223 gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||||||| |||||| ||||||    
T  1261492 gaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 63 - 292
Target Start/End: Complemental strand, 4759772 - 4759542
Alignment:
Q  63 aaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatc 159  Q
    ||||||||||||||| |   ||||||| |||||||  ||||| ||| |||||||| ||||||||||||||| ||| |||||||||||||||||  |||||    
T  4759772 aaatcgtgtcacgatttccagatcgtgtcacgatt--tgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatc 4759675  T
Q  160 gtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattt 259  Q
    ||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||||| | |||||||||||||||||| |||| ||||||||||||||    
T  4759674 gtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgattt 4759575  T
Q  260 ccctgttcttccagaccacaaatttgaagccaa 292  Q
    | |||||||||||||||||||||||||||||||    
T  4759574 ctctgttcttccagaccacaaatttgaagccaa 4759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 28 - 292
Target Start/End: Original strand, 36979741 - 36980006
Alignment:
Q  28 cacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtacgaccagtcc 124  Q
    ||||||||||||||||||| |||||||| || |   ||||||| |||||| |   ||||||| |||||||  ||||| |  ||||||||| |||||||||    
T  36979741 cacaagaacacttaaatactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatt--tgcgtacaacccaaggtatgaccagtcc 36979838  T
Q  125 ttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacga 224  Q
    ||||||  || |||||||||||||||||   |||||||||||||||| |||  |||||| || ||||||||  ||||||||| ||||||||||| | |||    
T  36979839 ttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcga 36979938  T
Q  225 aatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  36979939 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 36980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 81 - 292
Target Start/End: Complemental strand, 33037504 - 33037295
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||  ||||| ||| |||||| | |||||||||||||||  || |||||| ||||||||||   ||||||||||||||||||||  |||    
T  33037504 atcgtgtcacgatt--tgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 33037407  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    |||||| ||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  33037406 gtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaa 33037307  T
Q  281 atttgaagccaa 292  Q
    ||||||||||||    
T  33037306 atttgaagccaa 33037295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 30656088 - 30656274
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||  ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  30656088 cccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 30656187  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||| |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  30656188 ctagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30656274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 18852821 - 18852635
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| |||||||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  18852821 cccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 18852722  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||| |  |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    
T  18852721 ctagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaa 18852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 18870215 - 18870029
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||| |  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  18870215 cccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 18870116  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | |||||||| ||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  18870115 ctagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 18870029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 114 - 302
Target Start/End: Complemental strand, 3439273 - 3439087
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| |||||||||| ||||| ||||||||||| | ||||||    
T  3439273 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaacctagctca 3439175  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  3439174 cggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagac-aatctcaacat 3439087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 10683923 - 10683747
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||    
T  10683923 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacg 10683824  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  10683823 gcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10683747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 177 - 301
Target Start/End: Complemental strand, 31043032 - 31042908
Alignment:
Q  177 aatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 276  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  277 acaaatttgaagccaaatctcaaca 301  Q
    |||||||||||| ||||||||||||    
T  31042932 acaaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 304
Target Start/End: Original strand, 42575619 - 42575912
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| ||    |||||| |||||||  ||||| |||||    
T  42575619 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatt--tgcgtccgtcc 42575715  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| | ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| ||||||| || ||||||   |||||||| |    
T  42575716 caaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttgcacccctgcaacc 42575815  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacatga 304  Q
    | | ||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  42575816 ctaactcacggcatc-cgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacatga 42575912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 301
Target Start/End: Original strand, 7412776 - 7412952
Alignment:
Q  125 ttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacga 224  Q
    ||||| || ||||||||| |||||||||| |||||||||||||||||| || ||| ||  || |||||| ||||||||||||||||||||||||| ||      
T  7412776 ttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacag 7412875  T
Q  225 aatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  7412876 aatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 136 - 292
Target Start/End: Original strand, 6311771 - 6311927
Alignment:
Q  136 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 235  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||||| |  |||||||||||||    
T  6311771 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcac 6311870  T
Q  236 gatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  6311871 gatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 6311927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 25327844 - 25327672
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||| ||||||| ||      
T  25327844 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaactagctcacagcca 25327745  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  ||||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  25327744 cttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 81 - 301
Target Start/End: Complemental strand, 15290361 - 15290143
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaat 179  Q
    |||||| |||||||  ||||| |||||||||| || |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||    
T  15290361 atcgtgtcacgatt--tgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaat 15290264  T
Q  180 cgtgtcatgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    ||||||| ||||||   |||||||| || | ||||||||||| |||||||||||| | || ||||| ||||||||||||||||||||||||||| |||||    
T  15290263 cgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccac 15290165  T
Q  279 aaatttgaagccaaatctcaaca 301  Q
    |||||||||| | ||||||||||    
T  15290164 aaatttgaagac-aatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 81 - 301
Target Start/End: Complemental strand, 15470730 - 15470512
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccacaat 179  Q
    |||||| |||||||  ||||| |||||||||| || |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||| |||    
T  15470730 atcgtgtcacgatt--tgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaat 15470633  T
Q  180 cgtgtcatgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 278  Q
    ||||||| ||||||   |||||||| || | ||||||||||| |||||||||||| | || ||||| ||||||||||||||||||||||||||| |||||    
T  15470632 cgtgtcacgatttgcacccctgcaaccctaactcacggcatc-cgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccac 15470534  T
Q  279 aaatttgaagccaaatctcaaca 301  Q
    |||||||||| | ||||||||||    
T  15470533 aaatttgaagac-aatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 288
Target Start/End: Complemental strand, 7289620 - 7289439
Alignment:
Q  107 ccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    |||||||| ||| ||||||||||| ||| |||||||||||||||||   |||||||||||||||| |||  ||||||||| ||||||||  |||||||||    
T  7289620 ccaaggta-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac 7289522  T
Q  207 cagctcacggcatcac--gaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     |||||| ||| || |  |||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  7289521 tagctcatggc-tcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 292
Target Start/End: Complemental strand, 39784509 - 39784333
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| | |||||||   ||||||||||||||||||||  |||||| || ||||| ||| || ||||||   ||||||    
T  39784509 gaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 39784410  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| | |  |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  39784409 ggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39784333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 25689817 - 25689604
Alignment:
Q  26 tgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacgaccag 121  Q
    ||||||||||||||||||||| |||||||| ||  |  |||||||||||||| |     |||||| ||||||| |||  | |   |||||| ||||||||    
T  25689817 tgcacaagaacacttaaatactagccttcctctgttgcaatcgtgtcacgattttctcaatcgtgtcacgatttgtg--tacaaaccaaggaacgaccag 25689720  T
Q  122 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca 221  Q
    ||||||||| ||| |||||||||||||||||    ||||||| ||||||||||||||||||| || ||||| ||||||||||| | ||||||||||| |     
T  25689719 tccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacggca-cc 25689621  T
Q  222 cgaaatcgtgtcacgat 238  Q
    |||||||||||||||||    
T  25689620 cgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 292
Target Start/End: Complemental strand, 5702240 - 5701960
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   ||||||||| |||| | ||    ||||||||||||||||||||| |   |||||    
T  5702240 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaag 5702141  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgc-aaacca-g 209  Q
    |||||||||  ||||||| || |||  || | |||||||||| ||||||||||||| ||| ||| ||||||| || ||||  ||||||||| |||||| |    
T  5702140 gtacgaccaa-ccttatcctgaaaatgtacccagcaagtttgaaaatcgtgtcacgtttttccaaaatcgtgacacgattgagcaccctgcaaaaccatg 5702042  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||| |  | |  |||||  | |||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5702041 ctcaccgtct-agaaaatcaagacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 5701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 10688763 - 10688661
Alignment:
Q  136 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 235  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||||||||| |  |||||||||||||    
T  10688763 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcac 10688664  T
Q  236 gat 238  Q
    |||    
T  10688663 gat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 302
Target Start/End: Original strand, 35745794 - 35745980
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||| || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  ||  |||||   ||||||    
T  35745794 gaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcac 35745893  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    |||||| |   |||||||||||| ||||||| ||| | ||||||| | ||||||||||| ||||||||||||||||||| | |||||||    
T  35745894 ggcatctc-cgatcgtgtcacgattgccaaa-tcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacat 35745980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 31043106 - 31043035
Alignment:
Q  82 tcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttg 153  Q
    ||||| |||||||||| ||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||    
T  31043106 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttg 31043035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 31043191 - 31043133
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  31043191 caaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat 31043133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 10688672 - 10688626
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  10688672 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 10688626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 238
Target Start/End: Complemental strand, 43036218 - 43036062
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| ||  ||||||||||| ||  ||||||| || ||||||  | | |||||  | ||||||||||||| ||| ||| ||||    
T  43036218 atcgtgacacgtttggtgcgtacgatccaaggtacgatcaa-ccttatcctgaaaacttgcccaacaagtc-gaaaatcgtgtcacgtttttccaaaatc 43036121  T
Q  181 gtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgat 238  Q
    |||||| |||| | ||||||||||| || |||||||||||  |||||||||||||||||    
T  43036120 gtgtcacgattggacaccctgcaaaacatgctcacggcattgcgaaatcgtgtcacgat 43036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 42435582 - 42435736
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| || |||||||||||||||  ||||||| || ||||||  | ||||||   | ||||||||||||| || |||| ||||    
T  42435582 atcgtgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttgccaagcaagac-gaaaatcgtgtcacgtttccccaaaatc 42435679  T
Q  181 gtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacg 236  Q
    |||||| |||| | ||||||||||| || |||||||||||  | |||||||| ||||    
T  42435680 gtgtcacgattggacaccctgcaaaacatgctcacggcattgcaaaatcgtgacacg 42435736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 25689615 - 25689561
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  25689615 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagac-aatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 15212581 - 15212459
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| || |||||||||||||||  ||||||| || ||||||    ||||||   | ||||||||||||| ||||||| ||||    
T  15212581 atcgtgacacgtttggtgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttgctcagcaagcc-gaaaatcgtgtcacgttttcccaaaatc 15212484  T
Q  181 gtgtcatgatttggcaccctgcaaa 205  Q
    |||||| |||| | |||||||||||    
T  15212483 gtgtcacgattggacaccctgcaaa 15212459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 1746664 - 1746769
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacga-tgccaaattcgtgtc 252  Q
    ||||||||||||||||||||| |||||||||| |||| | | ||||| ||| |||||| || ||| | | |||||||||||||| ||||||||| |||||    
T  1746664 aaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctg-aaaacagctctcgacattaccaaaatcgtgtcacgattgccaaatt-gtgtc 1746761  T
Q  253 acgatttc 260  Q
    ||||||||    
T  1746762 acgatttc 1746769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 4456578 - 4456625
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaa 293  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||    
T  4456578 tcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 22976111 - 22975986
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| || ||||| ||||||| |  ||||||| || ||||||  | |||||| | | ||||||||||||| ||||||| ||||    
T  22976111 atcgtgacacgtttggtgcgtgcgacccaatgtacgacaaa-ccttatcctgaaaacttgtcaagcaagct-gaaaatcgtgtcacgttttcccaaaatc 22976014  T
Q  181 gtgtcatgatttggcaccctgcaaacca 208  Q
    |||||| |||| | ||||||| ||||||    
T  22976013 gtgtcacgattggacaccctgaaaacca 22975986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 4733548 - 4733472
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtg 231  Q
    ||||||||||||| ||||||| |||||||||| ||||   ||||||| ||| ||||||||| |||  ||||||||||    
T  4733548 aaatcgtgtcacgttttcccaaaatcgtgtcacgattgaacaccctggaaaacagctcacgacattgcgaaatcgtg 4733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 19175424 - 19175305
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||||||| | || |||||||||  ||||  ||||||| || |||| || | |||||||||| ||||| ||||||| ||||||| ||||    
T  19175424 atcgtggcacgattggtgcatacgacccaaggtataacca-accttatcctgaaaacgtacccagcaagtttgaaaatcatgtcacgttttcccaaaatc 19175326  T
Q  181 gtgtcatgatttggcaccctg 201  Q
    ||| || ||||  ||||||||    
T  19175325 gtgacacgattgagcaccctg 19175305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 19945785 - 19945869
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacgat 238  Q
    ||||||||||||||||||| | |||||||||| |||| | | ||||| |||||||||| || ||| | | |||||||||||||||    
T  19945785 aaatcgtgtcacgatttcctaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattatcaaaatcgtgtcacgat 19945869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 31217979 - 31217895
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacgat 238  Q
    ||||||||||||||||||||| ||||||||||  ||| | | ||||| |||||||||| || ||| | | |||||||||||||||    
T  31217979 aaatcgtgtcacgatttcccaaaatcgtgtcacaattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 31217895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 34254774 - 34254810
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatt 191  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34254774 aaatcgtgtcacgatttcccaaaatcgtgtcatgatt 34254810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 7412677 - 7412736
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacg 75  Q
    |||||||||||||||||||||||||| ||| ||| ||||  || ||||||||||| ||||    
T  7412677 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacg 7412736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 34256950 - 34256986
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatt 191  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  34256950 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 34256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 81 - 301
Target Start/End: Original strand, 43504501 - 43504721
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43504501 atcgtgtcacgattggtgcatctgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatc 43504600  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43504601 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 43504700  T
Q  281 atttgaagccaaatctcaaca 301  Q
    ||||||||| |||||||||||    
T  43504701 atttgaagctaaatctcaaca 43504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 302
Target Start/End: Original strand, 18409114 - 18409400
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||| |     ||||| |||||||||| ||| |||| ||||||||    
T  18409114 caaaatctgcacgagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtac 18409213  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  18409214 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacg 18409313  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18409314 gcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaacat 18409400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 21646358 - 21646643
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatct---gatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| |   ||||||| ||||||| |  ||| ||||||||||||     
T  21646358 caaaatctgcacaagaacacttaaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtggcacgatttgaacgtacgtcccaaggtat 21646457  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    ||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||    
T  21646458 gaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 21646557  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  21646558 gcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatgtcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 8 - 301
Target Start/End: Complemental strand, 39731248 - 39730933
Alignment:
Q  8 ccaactctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgt-------------------cacgatct---gatcgt 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||                   |||||| |   ||||||    
T  39731248 ccaactctcttcaaaatctgcacaagaacacttaaatactagccttccattgataaaatcgtgtcacgattttcagatcgtgtcacgatttccagatcgt 39731149  T
Q  86 gacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtc 185  Q
    | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||    
T  39731148 gtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtc 39731049  T
Q  186 atgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttg 285  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39731048 acgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttg 39730949  T
Q  286 aagccaaatctcaaca 301  Q
    ||||||||||||||||    
T  39730948 aagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 12 - 301
Target Start/End: Complemental strand, 48408671 - 48408398
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||                |||| ||| |||  ||||    
T  48408671 ctctcttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgat----------------tggtacgtacgttacaag 48408588  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagct 211  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||    
T  48408587 gtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagct 48408488  T
Q  212 cacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  48408487 cacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 48408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 18413990 - 18414275
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| || |||||| | ||||||| |||||||||| |     ||||| |||||||||| ||| |||| ||||||||    
T  18413990 caaaatctgcacaagaacacttaaatactagtcttccaatgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtac 18414089  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||  ||||||||| |||||||| |||||||||||||||||||    
T  18414090 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacg 18414189  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| ||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  18414190 gcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 25767258 - 25767540
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctga---tcgtgacacgattggtgcgttcgtcccaagg 112  Q
    ||||||||||||||||||||||||||||||| || |||||| | |||||||||||||||||| |     ||||| |||||||||| ||| |||| |||||    
T  25767258 cttcaaaatctgcacaagaacacttaaatactagtcttccattgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaagg 25767357  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
     |||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  25767358 cacgacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctc 25767457  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||||||| ||||||    
T  25767458 acggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttc------tttccagaccacaaatttgaagccaaatatcaaca 25767540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 106 - 301
Target Start/End: Complemental strand, 24789621 - 24789426
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||||||||||||    
T  24789621 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaa 24789522  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24789521 ctagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 2479676 - 2479960
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    ||||||||||||||||||||||| |||| || |||| ||| ||||||||||| |||| | |    ||| || || ||||| ||||| || ||||||||||    
T  2479676 caaaatctgcacaagaacacttatatactagtcttcaactgataaaatcgtgccacgttttccaaatcatgccatgattgatgcgtacgacccaaggtac 2479775  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| | |||||||| ||||||||| |||||||| || ||||||| || |||||| |||||||||||||||||||||    
T  2479776 gaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacg 2479874  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    |||| |  ||||||||||||||||||||| ||||||||| ||||| |||||||| || ||||||||||||||||||||| ||||||    
T  2479875 gcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 21640206 - 21640415
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||  ||||| ||| |||||| | |||||||||||||||  || |||||| ||||||||||   ||||||||||||||||||||  |||    
T  21640206 atcgtgtcacgatt--tgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 21640303  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    |||||| ||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  21640304 gtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaa 21640403  T
Q  281 atttgaagccaa 292  Q
    ||||||||||||    
T  21640404 atttgaagccaa 21640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 6592632 - 6592922
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  6592632 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 6592728  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||   |||||||| ||    
T  6592729 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccc 6592828  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6592829 tagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacat 6592922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 2058411 - 2058596
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||    
T  2058411 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 2058510  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||| | | ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  2058511 ctagctcacggcacctc-aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 2058596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 81 - 301
Target Start/End: Original strand, 47264048 - 47264267
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| || ||||| | ||| || |||||| ||||||||  ||||||| || ||||||||| |||||||||| |||||||||||||||||| ||||||     
T  47264048 atcgtgtcaagattgatacgtacgacccaagatacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacacaatt 47264146  T
Q  181 gtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaa 280  Q
    ||| || |||||| |||||| |||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||| || |||||||| |||||||    
T  47264147 gtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaa 47264246  T
Q  281 atttgaagccaaatctcaaca 301  Q
    |||||||||||||| ||||||    
T  47264247 atttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 301
Target Start/End: Original strand, 6594848 - 6595137
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  6594848 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 6594944  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc 207  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||| || ||||||   |||||||| ||    
T  6594945 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccc 6595044  T
Q  208 -agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  6595045 tagctcacggcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagac-aatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 114 - 301
Target Start/End: Complemental strand, 20343686 - 20343500
Alignment:
Q  114 acgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctca 213  Q
    ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||| ||| || |||| | ||||||    
T  20343686 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctca 20343587  T
Q  214 cggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| | ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  20343586 cggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 20357222 - 20357036
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||  |||| |||||||||| ||| |||||||||||||||||   |||| |||||||||||||||  |||||| || ||||||||  ||||||||    
T  20357222 cccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 20357123  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||| |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  20357122 ctagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 20357036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 81 - 301
Target Start/End: Original strand, 32060671 - 32060888
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    |||||| |||||||  ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||    
T  32060671 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatc 32060768  T
Q  181 gtgtcatgatttggcaccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 279  Q
    ||| || ||||||   |||||||| || ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  32060769 gtgccacgatttgcacccctgcaaccctagctcacggcatc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 32060867  T
Q  280 aatttgaagccaaatctcaaca 301  Q
    ||||||||| | ||||||||||    
T  32060868 aatttgaagac-aatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 18392499 - 18392780
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  18392499 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 18392596  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || ||||||||||| || ||||||||    
T  18392597 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacg 18392696  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| | | || |||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  18392697 gcacctccaa-tcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 292
Target Start/End: Original strand, 12406664 - 12406849
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||| |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  | ||||||    
T  12406664 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaa 12406762  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | ||||||||||  |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  12406763 ctagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 12406849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 302
Target Start/End: Original strand, 21983580 - 21983868
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| | | ||||  |    |||||||||||||| | |    |||||||||| |||||||||| || |||||||    
T  21983580 cttcaaaatctgcacaagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgttttccaaatcgtgacacaattggtgcgtacgacccaagg 21983679  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||  ||||||| || |||| || | | |||||||| ||||||||||||| |||| || |||| || |  |||| | ||||||||||||||||||    
T  21983680 tacgaccaa-ccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcacaaaatcatgccgcgattggtcaccctgcaaaccagctc 21983778  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||| |||  | ||||||||||||||||   || ||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||||    
T  21983779 acgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacat 21983868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 1533100 - 1532883
Alignment:
Q  104 gtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgca 203  Q
    |||||||||||  |||||||||||||| ||| |||||||||| ||||||   ||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  1533100 gtcccaaggtataaccagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgca 1533001  T
Q  204 aaccagctcacggca-------------tcacga------aatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattt 284  Q
    ||| |||||| ||||             ||||||      | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1533000 aactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaattt 1532901  T
Q  285 gaagccaaatctcaacat 302  Q
    |||||||||| |||||||    
T  1532900 gaagccaaatatcaacat 1532883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 120 - 292
Target Start/End: Original strand, 4873541 - 4873713
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || |||||||||||||||||   ||| ||||||||||||||||  |||||| || ||||||||  ||||||||| | || |||||      
T  4873541 agtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatcttacggcca 4873640  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  4873641 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 4873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 116 - 289
Target Start/End: Complemental strand, 24024003 - 24023830
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||||||||| ||||| |     
T  24024003 gaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctct 24023904  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 289  Q
    ||  |  ||||||||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  24023903 gccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 1562306 - 1562587
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||| ||||||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||| ||||| |||    
T  1562306 aaatctgcacaagaacacataaatactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcacaaggaacg 1562403  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacgg 216  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||| ||||||| || |||||   ||||   |||| |    |  |    
T  1562404 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgatttaaaacccaaaaaacaaaaaaaaag 1562503  T
Q  217 catcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  1562504 aaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 21811923 - 21811745
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||    |||||||||||||||||||  |||||| || ||||| |||||||||||||   ||||||    
T  21811923 gaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcac 21811824  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
    |||||| | | |||||||||||||| |||| ||||| ||||||| | |||||||||||||||||||||||||||||||||    
T  21811823 ggcatctc-agatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 21989245 - 21989531
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||  | |    ||| ||||||||||| |||||  | |||||||    
T  21989245 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacattttccaaatcatgacacgattgctgcgtatgacccaagg 21989344  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||| ||  ||||||| || |||| || | | |||||| | ||||||||||||| |||| || ||||||| || |||| | | ||||||||||||||||    
T  21989345 tacgatcaa-ccttatcctgaaaacgtacccatcaagttggaaaatcgtgtcacg-tttcacaaaatcgtgccacgattggtcgccctgcaaaccagctc 21989442  T
Q  213 acggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||| |||  | ||||||||||||||||   || || |||||||||||| ||||||||||| ||||||||||||||||||| | ||||||    
T  21989443 acgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 44847722 - 44847619
Alignment:
Q  198 cctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctc 297  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||| ||||||||  | ||||||||||||||||||||| ||    
T  44847722 cctgcaaaccagctcacgacattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttc 44847623  T
Q  298 aaca 301  Q
    ||||    
T  44847622 aaca 44847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 31109251 - 31109078
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac-ggc 217  Q
    |||||||||||   | ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||||||  |||||||||  |||| || |||    
T  31109251 agtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggc 31109152  T
Q  218 atcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | |  ||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  31109151 a-cttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 31109078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 12397390 - 12397484
Alignment:
Q  198 cctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||| ||||||||||  |  |||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12397390 cctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaa 12397484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 202
Target Start/End: Original strand, 18389063 - 18389246
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  18389063 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 18389160  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgc 202  Q
    |||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||| || || |||||||||    
T  18389161 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 47676439 - 47676631
Alignment:
Q  14 ctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtccca 109  Q
    |||||||||||||||| ||||||||||| ||| ||| |||| |||   ||||| |||||||| | |     ||||||||||| ||||||||| || ||||    
T  47676439 ctcttcaaaatctgca-aagaacacttatatatcagtcttcaactgtcaaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgaccca 47676537  T
Q  110 aggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    |||||||||||  ||||||| || ||||||  | ||||||   | ||||||||||||| ||||||| |||||||||| |||| | |||||||||||    
T  47676538 aggtacgaccaa-ccttatcctgaaaacttgcccagcaagcc-gaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaa 47676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 288
Target Start/End: Original strand, 16880476 - 16880648
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctcac 214  Q
    |||||||||||||||  |||||||||| |||||||||   ||||||||||| ||||||||  |||||| || ||||| ||  || |||||| | ||||||    
T  16880476 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcac 16880575  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   |||||||||||||| |||| ||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16880576 tgcctc-cctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 288
Target Start/End: Original strand, 16885331 - 16885503
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctcac 214  Q
    |||||||||||||||  |||||||||| |||||||||   ||||||||||| ||||||||  |||||| || ||||| ||  || |||||| | ||||||    
T  16885331 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcac 16885430  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   |||||||||||||| |||| ||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16885431 tgcctc-cctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 43504457 - 43504513
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat 77  Q
    ||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||    
T  43504457 aaatctgcacaggaacacttaaatactagccctccactgataaaatcgtgtcacgat 43504513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 48491443 - 48491334
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaa 110  Q
    |||||||||||||||||||||||||||||||  | ||| | ||||  |||||| ||||||| | ||    ||||||||||| ||||||||| || |||||    
T  48491443 tcttcaaaatctgcacaagaacacttaaatagtaccctgcaactatcaaaatcatgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaa 48491344  T
Q  111 ggtacgacca 120  Q
    ||||||||||    
T  48491343 ggtacgacca 48491334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 49092026 - 49092223
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg-----atcgtgacacgattggtgcgttcgtcccaa 110  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||   |||||||||||||| | ||     |||||| ||| |||||||| | ||  ||||    
T  49092026 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaa 49092125  T
Q  111 ggtacgaccagtccttatcatggaaa-cttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca 208  Q
    ||||||||||  ||||||| || ||| | || | |||||||| | ||||||||||||  ||||||| ||||||| || ||||  |||||||||||||||    
T  49092126 ggtacgaccaa-ccttatcctgaaaaacgtacccagcaagttcgaaaatcgtgtcacattttcccaaaatcgtgacacgattgagcaccctgcaaacca 49092223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 4178497 - 4178413
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatca-cgaaatcgtgtcacgat 238  Q
    ||||||||||||||||||||| |||||||||| |||| | | ||||| |||||||||| || ||| | | |||||||||||||||    
T  4178497 aaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaccagctctcgacattaccaaaatcgtgtcacgat 4178413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 24261005 - 24260929
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgattt 192  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||||||||| |||||    
T  24261005 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 24260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 47674316 - 47674438
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||| ||||||||| |  |||||||||||||||  ||||||| || ||||||  | ||||||   | ||||||||||||| ||||||| ||||    
T  47674316 atcgtgacacgtttggtgcgtacaacccaaggtacgaccaa-ccttatcctgaaaacttgcccagcaagcc-gaaaatcgtgtcacgttttcccaaaatc 47674413  T
Q  181 gtgtcatgatttggcaccctgcaaa 205  Q
    |||||| |||| | |||||||||||    
T  47674414 gtgtcacgattggacaccctgcaaa 47674438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 2647388 - 2647271
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatc 180  Q
    ||||||||||||||||||||| || |||||||||||||||  ||||||| || |||| |  | |||||| ||| ||||| ||||||| ||||||| ||||    
T  2647388 atcgtgacacgattggtgcgtacgacccaaggtacgacca-accttatcctgaaaacgtgcccagcaag-ttgaaaatcatgtcacgttttcccaaaatc 2647291  T
Q  181 gtgtcatgatttggcaccct 200  Q
    ||| || ||||  |||||||    
T  2647290 gtgacacgattaagcaccct 2647271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 79958 - 80004
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||    
T  79958 tcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaa 80004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 24260895 - 24260829
Alignment:
Q  226 atcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||| | || ||||| ||||||| | ||||||| ||| |||||||||||||||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 24260829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 12397312 - 12397380
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca 175  Q
    ||||||||| ||| |||||||||||  || |||||||||||||||||   ||||||||||||||||||||    
T  12397312 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca 12397380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 24265861 - 24265689
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  24265861 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 24265762  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   ||||||||||||   |||| ||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  24265761 tgcctc-cctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 24265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 18390508 - 18390563
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
    ||||| ||||||||||||||||||| | ||||||||||||||| | |||||||||||    
T  18390508 tcgtggcacgatttccctgttcttctaaaccacaaatttgaagac-aatctcaacat 18390563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 48489295 - 48489186
Alignment:
Q  15 tcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaa 110  Q
    |||||||||||||||||||||||||||||||  | ||| | |||   |||||| ||||||| | ||    ||||||||||||||||||||| |  |||||    
T  48489295 tcttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcatgtcacgttttgccaaatcgtgacacgattggtgcgtacaacccaa 48489196  T
Q  111 ggtacgacca 120  Q
    |||| |||||    
T  48489195 ggtatgacca 48489186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 33332141 - 33332102
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgacca 120  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  33332141 atcgtgacacgattggtgcgtacgacccaaggtacgacca 33332102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 44847882 - 44847730
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||| |||||||||||||| ||| | | ||||  || ||||||||||| |||| | |    |||||| |||||||| | ||| || ||||||||||    
T  44847882 caaaatctacacaagaacacttatatagccgtcttcagctgataaaatcgtgccacgttttccaaatcgtgccacgattgatacgtacgacccaaggtac 44847783  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgat 169  Q
    |||||  ||||||| || ||||||||| | |||||||| |||| ||| ||||||    
T  44847782 gacca-accttatcctgaaaacttaaccaacaagtttgaaaattgtgccacgat 44847730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 48599941 - 48600044
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcac 254  Q
    ||||||||||||| || |||| |||||||||| ||||  |||||||||||| |||||| || |||  | |||||||| |||| | |  || |||||||||    
T  48599941 aaatcgtgtcacgtttccccataatcgtgtcacgattgtgcaccctgcaaaacagctctcgacattgcaaaatcgtgacacgcttcacaaatcgtgtcac 48600040  T
Q  255 gatt 258  Q
    ||||    
T  48600041 gatt 48600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 4538996 - 4539046
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||||||| ||||||| |||||||||| |||| |||||||| ||||    
T  4538996 aaatcgtgtcacgttttcccaaaatcgtgtcacgattaggcacccttcaaa 4539046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 2761675 - 2761762
Alignment:
Q  81 atcgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatt 170  Q
    ||||||||||| ||||||||| || ||||||||||||||| | |||||| || ||||||  | ||||||  || ||||||||||||||||    
T  2761675 atcgtgacacgtttggtgcgtacgacccaaggtacgaccaat-cttatcctgaaaacttgcccagcaag-ctgaaaatcgtgtcacgatt 2761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 6360575 - 6360632
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||||||| || |||| ||||||||||  ||| ||||||||||||| ||||||    
T  6360575 aaatcgtgtcacgtttccccaaaatcgtgtcacaattgggcaccctgcaaaacagctc 6360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 2361603 - 2361691
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaa 243  Q
    |||| |||||||| || |||| |||||||||| ||||||||| ||| |||| |||||| || |||    ||||||||||||||| ||||    
T  2361603 aaattgtgtcacgtttccccaaaatcgtgtcacgatttggcatcctacaaaacagctctcgacattgtaaaatcgtgtcacgattccaa 2361691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 17700 - 17431
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||                |||  ||| |||| ||||||||    
T  17700 cttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgat----------------tggaacgtacgtcacaaggtac 17617  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    ||||| ||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  17616 gaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 17517  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17516 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 767 - 523
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |    |||||| ||| |||||| ||| |||| ||||||||    
T  767 caaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacaattggtacgtacgtcacaaggtac 668  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    ||||||||| |||| |||||||||||||||||| |||| |||||||||||||||| | ||  ||||||||| ||||||||||||||||||| ||||||||    
T  667 gaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacg 568  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  567 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 21 - 301
Target Start/End: Complemental strand, 22203 - 21939
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctgatcgtgacacgattggtgcgttcgtcccaaggtacgacca 120  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||                |||| ||| |||| ||||||||||||     
T  22203 aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgat----------------tggtacgtacgtcacaaggtacgacct 22120  T
Q  121 gtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcatc 220  Q
    ||||||||||  || |||||||||||||||||   ||||||||||||||||||||  ||||||||| ||||||||  ||||||||| ||||||||||| |    
T  22119 gtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 22020  T
Q  221 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
     |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  22019 tcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 21 - 301
Target Start/End: Original strand, 2904 - 3185
Alignment:
Q  21 aaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcccaaggtacg 116  Q
    |||||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||||||| |||    
T  2904 aaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacg 3001  T
Q  117 accagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcacg 215  Q
    |||||||||||||| | | |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||   |||||||| || ||||||||    
T  3002 accagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcacg 3101  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  3102 gcatc-cgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 117; Significance: 2e-59; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 302
Target Start/End: Complemental strand, 133036 - 132751
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||| |||||||||||||||| ||| ||| ||||  || ||||||||||| |||| | |    |||||| |||||||| | ||| || ||||||||||    
T  133036 caaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtac 132937  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| |||||||||| ||||| |||||||||| | || |||||||||| |||||| ||| |||||||||||||||||    
T  132936 gaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacacactgcaaaccagctcacg 132838  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     |||||| |||||||| |||||| ||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  132837 acatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaacat 132751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 292
Target Start/End: Original strand, 2830 - 3109
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||||||| ||| ||| ||||  ||  ||||||||||||||| |    |  ||||||||||||||||||||| || ||||||    
T  2830 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 2929  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa-cca-g 209  Q
    |||||||||  ||||||| || |||| || | |||||||||| |||||| |||||| ||||||| ||||||| || ||||  | |||||  ||| ||| |    
T  2930 gtacgaccaa-ccttatcctgaaaacatacccagcaagtttgaaaatcgggtcacgttttcccaaaatcgtgacacgattgagtaccctaaaaaaccatg 3028  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | || |   ||||||||  |||| ||   || |||||||| |||||| ||||||||||| |||||||||||||||||||    
T  3029 ctcgctgcctg--gaaatcgttacacgttgatgaaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaa 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 16 - 292
Target Start/End: Original strand, 6022 - 6301
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgat----ctgatcgtgacacgattggtgcgttcgtcccaag 111  Q
    |||||||||||||||||||||| ||| ||| ||| ||||  ||   |||||||||||||| |    |  || |||||||||||||||||| || ||||||    
T  6022 cttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaag 6121  T
Q  112 gtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctg-caaacca-g 209  Q
    |||||||||  ||||||| || |||| || | |||||||||| ||||||||||||  ||||||| |||| || || ||||    ||| ||  |||||| |    
T  6122 gtacgacca-accttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaaatcatgacacgattgaataccttgaaaaaccatg 6220  T
Q  210 ctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||| | ||  |  ||||||||| |||| ||   || ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  6221 ctcgctgc--ctagaaatcgtgacacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 6301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 177 - 301
Target Start/End: Complemental strand, 8035 - 7911
Alignment:
Q  177 aatcgtgtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 276  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  8035 aatcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagacc 7936  T
Q  277 acaaatttgaagccaaatctcaaca 301  Q
    |||||||||||||||||||||||||    
T  7935 acaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 8168 - 8038
Alignment:
Q  25 ctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtacgaccag 121  Q
    ||||||| ||||||||||||||||| ||||  || |||||||| || |||||| |    |||||| |||||||| | ||| || |||||||||||||||     
T  8168 ctgcacacgaacacttaaataccagtcttcagctgataaaatcatgccacgattttcaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa 8069  T
Q  122 tccttatcatggaaacttaacgagcaagtttg 153  Q
     ||||||| || ||||||||| | ||||||||    
T  8068 -ccttatcctgaaaacttaaccaacaagtttg 8038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 97 - 302
Target Start/End: Original strand, 4107 - 4311
Alignment:
Q  97 tgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggca 196  Q
    ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||| || ||||||       
T  4107 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcac 4206  T
Q  197 ccctgcaaacc-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatc 295  Q
    |||||||| || ||||||||||| |   ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||    
T  4207 ccctgcaaccctagctcacggcaccta-aaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatc 4304  T
Q  296 tcaacat 302  Q
    |||||||    
T  4305 tcaacat 4311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 6149 - 5857
Alignment:
Q  12 ctctcttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg----atcgtgacacgattggtgcgttcgtcc 107  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||| ||  |  |||||||||||||| |     |||||| |||||||  ||||| |||||    
T  6149 ctctcttcaaa-tctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatt--tgcgtccgtcc 6053  T
Q  108 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttc-ccacaatcgtgtcatgatttggcaccctgcaaac 206  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||    |||||||||||||||  ||||||||||| || || || ||||||||||| |    
T  6052 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaacc 5953  T
Q  207 c-agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacatg 303  Q
    | ||||||||||| | | || |||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  5952 ctagctcacggcacctccaa-tcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacatg 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 19 - 294
Target Start/End: Complemental strand, 43718 - 43441
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||||||||||| |||||||| ||| |||  |||  || ||||||||||| |||| | |    |||||| |||||||| | | | || ||||||||||    
T  43718 caaaatctgcacaaaaacacttatatagcagtattcagctgataaaatcgtgccacgttttccaaatcgtgccacgattgatacatacgacccaaggtac 43619  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||||| |||||||||| ||||| |||||||||||| || ||||||  || |||||| ||||||| |||||||||||||    
T  43618 gaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacg 43520  T
Q  216 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaat 294  Q
     ||| || ||||||||||||||||||| | ||||||||||||||| || |||||||| |||| ||||||||||||||||    
T  43519 acattacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaat 43441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 230
Target Start/End: Complemental strand, 36592 - 36376
Alignment:
Q  16 cttcaaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaagg 112  Q
    |||||||||||||||||||||||||  ||| ||| ||||  || ||||||||||| |||| | |    |||||| || ||||||||||| || |||||||    
T  36592 cttcaaaatctgcacaagaacacttttatagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgccatgattggtgcgtacgacccaagg 36493  T
Q  113 tacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctc 212  Q
    ||||||||  ||||||| || |||| || | |||||||||| |||| |||||||| |||| || ||||||| || |||||| ||||||||||||||||||    
T  36492 tacgaccaa-ccttatcctgaaaacgtacccagcaagtttgaaaattgtgtcacgttttcacaaaatcgtgccacgatttgacaccctgcaaaccagctc 36394  T
Q  213 acggcatcacgaaatcgt 230  Q
    ||| ||| || |||||||    
T  36393 acgacattacaaaatcgt 36376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 83 - 302
Target Start/End: Complemental strand, 1300 - 1082
Alignment:
Q  83 cgtgacacgattggtgcgttcgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgt 182  Q
    |||| |||||||| | ||| || || ||||||||||||  ||||||| || ||||||||| |||||||||  |||||||||||||||||| || ||||||    
T  1300 cgtgccacgattgatacgtacgaccgaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgt 1202  T
Q  183 gtcatgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaat 282  Q
      || |||||| |||||||||||||| ||||||  || || ||||||||||||||||||||| ||||||||||||||  |||||||| || |||||||||    
T  1201 accacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaat 1102  T
Q  283 ttgaagccaaatctcaacat 302  Q
    |||||| ||||| |||||||    
T  1101 ttgaaggcaaatttcaacat 1082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 3517 - 3345
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||| || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  ||| ||||| ||||||||||      
T  3517 agtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcacggcca 3418  T
Q  220 cacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |  ||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  3417 cttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 106 - 292
Target Start/End: Complemental strand, 34747 - 34562
Alignment:
Q  106 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaa 205  Q
    ||||||||| ||| |||||||||||  || |||||||||||||||||   ||||||||||||||||||||  |||||| || ||||||||  | ||||||    
T  34747 cccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaaa 34649  T
Q  206 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    | | || |||||  |  ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34648 caaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 34562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 45539 - 45760
Alignment:
Q  19 caaaatctgcacaagaacacttaaataccagccttccactaataaaatcgtgtcacgatctg---atcgtgacacgattggtgcgttcgtcccaaggtac 115  Q
    |||||| |||||||||||||||||||||||  ||||  || ||||||||||| |||| | |    |||||| |||||||| |  || || ||||||||||    
T  45539 caaaatttgcacaagaacacttaaataccaatcttcagctgataaaatcgtgccacgttttccaaatcgtgtcacgattgatatgtacgacccaaggtac 45638  T
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacg 215  Q
    |||||  ||||||| || ||||||| | |||||||||| |||||||||||||||||| || ||||||| || |||||| ||||||||||| |||||||||    
T  45639 gaccaa-ccttatcctgaaaacttagccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaatcagctcacg 45737  T
Q  216 gcatcacgaaatcgtgtcacgat 238  Q
     ||| || |||| ||||||||||    
T  45738 acattacaaaattgtgtcacgat 45760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 45751 - 45804
Alignment:
Q  248 gtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 301  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  45751 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaaca 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 292
Target Start/End: Original strand, 761 - 937
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||| || ||||||   ||||||    
T  761 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 860  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||| | |  |||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  861 ggcacctc-caatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 1784 - 1717
Alignment:
Q  225 aatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 1717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 8112 - 8230
Alignment:
Q  120 agtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaaccagctcacggcat 219  Q
    |||||||||||  || |||||||||||||||||   |||||||||||||||| |||  |||||| || ||||||||  ||||||||| ||||||||||      
T  8112 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 8211  T
Q  220 cacgaaatcgtgtcacgat 238  Q
    |  ||||||||||||||||    
T  8212 cttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 8219 - 8265
Alignment:
Q  246 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 292  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  8219 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 8265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 1923 - 1751
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  |||||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||   ||||||    
T  1923 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 1824  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||||||| ||||| |||||||||    
T  1823 tgcctc-cccgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 148628 - 148456
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  |||||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||   ||||||    
T  148628 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 148529  T
Q  215 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||||||| ||||| |||||||||    
T  148528 tgcctc-cccgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 116 - 302
Target Start/End: Complemental strand, 18848 - 18662
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacc-agctcac 214  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  18848 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 18749  T
Q  215 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaacat 302  Q
     || || |  | |||||||||||| ||||||| || | ||||||| | ||||||| ||| ||||||||||||||||||| | |||||||    
T  18748 tgcctctccga-tcgtgtcacgattgccaaat-cgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacat 18662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 13968 - 13796
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  13968 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 13869  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   ||||||||||||   |||| ||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  13868 tgcctc-cctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 13796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 292
Target Start/End: Original strand, 86067 - 86203
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtca 253  Q
    ||||||||||||| ||||||| ||||||| |||||||  ||||||||||||||| |||| | ||  |  ||||||||| |||| ||   || ||||||||    
T  86067 aaatcgtgtcacgttttcccaaaatcgtg-catgattgagcaccctgcaaaccatgctccctgc--ctggaaatcgtgacacgttgatgaaatcgtgtca 86163  T
Q  254 cgatttccctgttcttccagaccac-aaatttgaagccaa 292  Q
    ||||||| || |||||||| ||||| ||||||||||||||    
T  86164 cgatttctctattcttccaaaccacaaaatttgaagccaa 86203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 20860 - 20963
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaacca-gctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtca 253  Q
    ||||||||||||| ||||||| ||||||||||||||| | ||||||||||| || ||||||| |||  | |||||||| |||| | |  || ||||||||    
T  20860 aaatcgtgtcacgttttcccaaaatcgtgtcatgattggacaccctgcaaaacatgctcacgacattgcaaaatcgtgacacgcttcacaaatcgtgtca 20959  T
Q  254 cgat 257  Q
    ||||    
T  20960 cgat 20963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 176634 - 176462
Alignment:
Q  116 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcatgatttggcaccctgcaaac-cagctcac 214  Q
    |||||||||||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| || ||||| ||  || ||||||  |||||||    
T  176634 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 176535  T
Q  215 ggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 288  Q
     || || |   ||||||||||||   |||| ||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  176534 tgcctc-cctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 176462  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 434254 - 434218
Alignment:
Q  155 aaatcgtgtcacgatttcccacaatcgtgtcatgatt 191  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  434254 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 434218  T

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