View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16091_high_100 (Length: 288)

Name: NF16091_high_100
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16091_high_100
NF16091_high_100
[»] chr7 (35 HSPs)
chr7 (15-273)||(32730205-32730463)
chr7 (114-195)||(30496640-30496721)
chr7 (100-194)||(1417201-1417295)
chr7 (85-181)||(30456474-30456570)
chr7 (108-195)||(30133985-30134072)
chr7 (96-150)||(18350742-18350796)
chr7 (87-173)||(29363476-29363562)
chr7 (108-188)||(27492738-27492818)
chr7 (87-166)||(12110325-12110404)
chr7 (113-188)||(31002704-31002779)
chr7 (140-181)||(12835016-12835057)
chr7 (105-170)||(27700197-27700262)
chr7 (119-180)||(30180002-30180063)
chr7 (134-198)||(5272893-5272957)
chr7 (124-188)||(35536050-35536114)
chr7 (86-230)||(27481319-27481465)
chr7 (87-150)||(30812129-30812192)
chr7 (113-160)||(44821930-44821977)
chr7 (86-180)||(4966107-4966201)
chr7 (82-208)||(22759109-22759235)
chr7 (111-169)||(34083575-34083633)
chr7 (134-180)||(39591540-39591586)
chr7 (134-180)||(47046181-47046227)
chr7 (119-168)||(946715-946764)
chr7 (119-188)||(3802197-3802266)
chr7 (113-186)||(25827337-25827410)
chr7 (108-169)||(27548225-27548286)
chr7 (134-171)||(28440479-28440516)
chr7 (114-171)||(38010674-38010731)
chr7 (134-207)||(39539834-39539907)
chr7 (134-170)||(23918918-23918954)
chr7 (87-171)||(28165051-28165135)
chr7 (140-188)||(28178912-28178960)
chr7 (108-168)||(46104349-46104409)
chr7 (108-168)||(46825061-46825121)
[»] chr6 (33 HSPs)
chr6 (96-193)||(33787780-33787877)
chr6 (113-207)||(29274281-29274375)
chr6 (113-186)||(9093608-9093681)
chr6 (87-196)||(33500507-33500616)
chr6 (87-171)||(2027432-2027516)
chr6 (87-193)||(24836228-24836331)
chr6 (87-210)||(32386589-32386712)
chr6 (96-170)||(1401071-1401144)
chr6 (114-188)||(7354147-7354221)
chr6 (134-188)||(20671938-20671992)
chr6 (124-186)||(24782004-24782066)
chr6 (98-163)||(31776312-31776377)
chr6 (98-170)||(3181105-3181177)
chr6 (87-207)||(5328898-5329017)
chr6 (108-171)||(281895-281958)
chr6 (108-187)||(4248902-4248981)
chr6 (113-184)||(10150304-10150375)
chr6 (108-171)||(22742326-22742389)
chr6 (141-188)||(29269839-29269886)
chr6 (113-188)||(31624201-31624276)
chr6 (140-207)||(31672547-31672614)
chr6 (105-160)||(33828617-33828672)
chr6 (113-171)||(2735029-2735087)
chr6 (134-188)||(7713968-7714022)
chr6 (141-207)||(8349744-8349810)
chr6 (142-208)||(21959651-21959717)
chr6 (98-168)||(28088259-28088329)
chr6 (115-180)||(5550083-5550148)
chr6 (108-169)||(14492264-14492325)
chr6 (141-194)||(27893984-27894037)
chr6 (98-170)||(3155137-3155209)
chr6 (108-180)||(4006665-4006737)
chr6 (135-207)||(13908166-13908238)
[»] chr1 (34 HSPs)
chr1 (114-211)||(40304107-40304204)
chr1 (85-167)||(15515505-15515587)
chr1 (134-193)||(36151578-36151637)
chr1 (108-186)||(33527194-33527272)
chr1 (96-209)||(44032034-44032147)
chr1 (113-209)||(49516991-49517088)
chr1 (94-180)||(17269201-17269287)
chr1 (113-171)||(30371108-30371166)
chr1 (134-180)||(47877073-47877119)
chr1 (134-195)||(4256115-4256176)
chr1 (113-178)||(27738232-27738297)
chr1 (97-168)||(4548684-4548755)
chr1 (114-181)||(31517793-31517860)
chr1 (134-188)||(10233703-10233757)
chr1 (141-195)||(11560629-11560683)
chr1 (141-207)||(16982016-16982082)
chr1 (134-188)||(27145808-27145862)
chr1 (142-188)||(43029482-43029528)
chr1 (86-171)||(6932986-6933071)
chr1 (114-187)||(7218127-7218200)
chr1 (114-171)||(7273992-7274049)
chr1 (113-166)||(10199460-10199513)
chr1 (119-168)||(17628562-17628611)
chr1 (113-186)||(24915103-24915176)
chr1 (134-187)||(28768040-28768093)
chr1 (113-166)||(32435295-32435348)
chr1 (105-193)||(4276680-4276768)
chr1 (95-187)||(5421954-5422046)
chr1 (87-187)||(7472256-7472355)
chr1 (140-180)||(14737784-14737824)
chr1 (87-163)||(35179107-35179183)
chr1 (111-171)||(36070210-36070270)
chr1 (140-188)||(50319235-50319283)
chr1 (108-168)||(51695542-51695601)
[»] chr5 (36 HSPs)
chr5 (105-188)||(32172596-32172679)
chr5 (111-169)||(3977270-3977328)
chr5 (87-169)||(9202774-9202856)
chr5 (96-189)||(6582867-6582960)
chr5 (111-188)||(12595501-12595578)
chr5 (119-188)||(28586824-28586893)
chr5 (96-184)||(12975294-12975382)
chr5 (97-181)||(14295456-14295540)
chr5 (87-171)||(36639482-36639566)
chr5 (108-180)||(42583100-42583172)
chr5 (111-185)||(10303747-10303819)
chr5 (105-207)||(19177403-19177505)
chr5 (87-188)||(4014450-4014551)
chr5 (87-168)||(12425534-12425615)
chr5 (119-168)||(38831514-38831563)
chr5 (87-163)||(21768223-21768299)
chr5 (137-185)||(35095859-35095907)
chr5 (96-171)||(38047890-38047965)
chr5 (136-187)||(7853602-7853653)
chr5 (113-168)||(10272483-10272538)
chr5 (98-187)||(2568601-2568691)
chr5 (113-195)||(18857452-18857534)
chr5 (154-208)||(29115306-29115360)
chr5 (134-180)||(29117003-29117049)
chr5 (134-188)||(37063147-37063201)
chr5 (134-171)||(11615468-11615505)
chr5 (138-195)||(11835213-11835270)
chr5 (96-169)||(14932252-14932324)
chr5 (96-169)||(18875323-18875396)
chr5 (87-168)||(37588386-37588467)
chr5 (87-168)||(39594771-39594851)
chr5 (112-169)||(42569031-42569088)
chr5 (151-207)||(13224353-13224409)
chr5 (87-163)||(13604875-13604951)
chr5 (114-166)||(32059642-32059694)
chr5 (134-170)||(40120081-40120117)
[»] chr2 (30 HSPs)
chr2 (87-187)||(656803-656903)
chr2 (105-173)||(11513856-11513924)
chr2 (87-168)||(27288596-27288675)
chr2 (87-168)||(9395093-9395174)
chr2 (100-169)||(11863689-11863758)
chr2 (134-211)||(35459830-35459907)
chr2 (87-171)||(34339866-34339950)
chr2 (109-169)||(43965169-43965229)
chr2 (89-160)||(1625871-1625942)
chr2 (95-210)||(3102614-3102729)
chr2 (134-209)||(14209199-14209274)
chr2 (112-171)||(23143029-23143088)
chr2 (112-171)||(23554819-23554878)
chr2 (87-130)||(36415699-36415742)
chr2 (87-186)||(43259779-43259878)
chr2 (116-187)||(43529906-43529977)
chr2 (87-169)||(4026779-4026861)
chr2 (154-188)||(12215750-12215784)
chr2 (149-211)||(35329907-35329969)
chr2 (114-168)||(35539686-35539740)
chr2 (141-187)||(40758967-40759013)
chr2 (114-180)||(43199365-43199431)
chr2 (134-183)||(17380515-17380564)
chr2 (114-171)||(22681238-22681295)
chr2 (135-188)||(40837502-40837555)
chr2 (108-169)||(44438886-44438947)
chr2 (108-188)||(5133715-5133795)
chr2 (113-169)||(15377727-15377783)
chr2 (108-188)||(28933767-28933847)
chr2 (148-188)||(35099687-35099727)
[»] chr8 (23 HSPs)
chr8 (109-188)||(9699944-9700023)
chr8 (141-207)||(14482126-14482192)
chr8 (109-167)||(12361156-12361214)
chr8 (134-187)||(11000634-11000687)
chr8 (99-171)||(787144-787216)
chr8 (96-180)||(4763869-4763953)
chr8 (108-188)||(30627949-30628029)
chr8 (87-171)||(34551080-34551164)
chr8 (108-184)||(34770839-34770915)
chr8 (87-183)||(42215332-42215428)
chr8 (105-188)||(1470900-1470983)
chr8 (134-169)||(3537104-3537139)
chr8 (109-164)||(7630244-7630299)
chr8 (96-166)||(6509338-6509408)
chr8 (86-195)||(4558734-4558843)
chr8 (87-164)||(10383852-10383929)
chr8 (96-180)||(29699205-29699287)
chr8 (87-180)||(31862444-31862537)
chr8 (97-161)||(9834825-9834889)
chr8 (109-169)||(29168940-29169000)
chr8 (148-188)||(39392748-39392788)
chr8 (140-180)||(40280284-40280324)
chr8 (140-188)||(42597344-42597392)
[»] chr4 (28 HSPs)
chr4 (85-188)||(56480291-56480394)
chr4 (98-186)||(10192229-10192317)
chr4 (100-188)||(54325076-54325164)
chr4 (113-171)||(53626736-53626794)
chr4 (139-207)||(486005-486074)
chr4 (108-169)||(3175913-3175974)
chr4 (96-181)||(17884018-17884103)
chr4 (108-169)||(25885821-25885882)
chr4 (106-171)||(32741327-32741392)
chr4 (103-171)||(52746882-52746950)
chr4 (99-186)||(2996518-2996605)
chr4 (100-171)||(42321919-42321989)
chr4 (108-186)||(18630625-18630703)
chr4 (142-188)||(41088327-41088373)
chr4 (114-188)||(45128363-45128437)
chr4 (114-192)||(49219078-49219156)
chr4 (134-183)||(4071830-4071879)
chr4 (143-188)||(9680607-9680652)
chr4 (87-188)||(18628569-18628670)
chr4 (114-207)||(24929417-24929510)
chr4 (105-170)||(29194447-29194512)
chr4 (87-168)||(30581703-30581784)
chr4 (147-208)||(41606109-41606170)
chr4 (141-189)||(34368819-34368867)
chr4 (108-188)||(46415839-46415919)
chr4 (140-195)||(51044537-51044593)
chr4 (87-171)||(52735082-52735166)
chr4 (136-188)||(55575963-55576014)
[»] chr3 (30 HSPs)
chr3 (87-181)||(237347-237441)
chr3 (114-180)||(49254708-49254774)
chr3 (87-188)||(22232769-22232870)
chr3 (96-164)||(48286845-48286913)
chr3 (97-188)||(52618946-52619037)
chr3 (96-209)||(27792794-27792907)
chr3 (134-208)||(32703061-32703135)
chr3 (108-173)||(32555028-32555093)
chr3 (108-188)||(20874351-20874431)
chr3 (140-180)||(48364958-48364998)
chr3 (87-207)||(54775052-54775171)
chr3 (96-187)||(24887318-24887409)
chr3 (124-171)||(31053153-31053200)
chr3 (113-195)||(36783386-36783469)
chr3 (108-207)||(38462205-38462304)
chr3 (134-188)||(1395614-1395668)
chr3 (113-171)||(37788820-37788878)
chr3 (96-166)||(40665394-40665464)
chr3 (148-210)||(43116515-43116577)
chr3 (141-194)||(2128331-2128384)
chr3 (109-166)||(2318609-2318666)
chr3 (115-188)||(22214735-22214808)
chr3 (108-185)||(25447291-25447368)
chr3 (134-187)||(49586989-49587042)
chr3 (96-168)||(1816546-1816618)
chr3 (134-186)||(15304420-15304472)
chr3 (140-208)||(16790435-16790503)
chr3 (114-186)||(25453912-25453983)
chr3 (108-184)||(33405214-33405290)
chr3 (140-188)||(40122831-40122879)
[»] scaffold0654 (1 HSPs)
scaffold0654 (87-207)||(6663-6783)
[»] scaffold0014 (1 HSPs)
scaffold0014 (87-207)||(116582-116702)
[»] scaffold0024 (1 HSPs)
scaffold0024 (114-180)||(27527-27593)
[»] scaffold0053 (1 HSPs)
scaffold0053 (100-188)||(20122-20210)


Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 32730205 - 32730463
Alignment:
Q  15 aacatttgtgggattgtttgacagtttatagactacttatgacatgtctataataaactatttccatcttatttatttacgtaagctctacatgataact 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32730205 aacatttgtgggattgtttgacagtttatagactacttatgacatgtctataataaactatttccatcttatttatttacgtaggctctacatgataact 32730304  T
Q  115 tatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaacacatt 214  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32730305 tatgaaaacagcttatcagttatacgaaaacaatttgatttgattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaacacatt 32730404  T
Q  215 ctataagcacctaattgaaattcttatccaaatagaattgaatatctatcacttgtatc 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32730405 ctataagcacctaattgaaattcttatccaaatagaattgaatatctatcacttgtatc 32730463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 30496721 - 30496640
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    ||||||||||| | |||  |||||||||||||||||||| |||||||||| ||||||| | |||||||||||||| ||||||    
T  30496721 ttatgaaaacaacctataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaaca 30496640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 1417295 - 1417201
Alignment:
Q  100 ctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaac 194  Q
    |||| |||| || |||||||||||| |||||   ||||| ||||||||||||| |||||||||||||||||| |  ||||||||||||| |||||    
T  1417295 ctctccatgctagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaac 1417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 30456474 - 30456570
Alignment:
Q  85 atttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    |||||||| | |||||||| || ||||  ||||||||||  ||||| | ||||| ||||||||||||| |||||||||||||||||| | |||||||    
T  30456474 atttattttcataagctctccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgttttagaaatag 30456570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 30134072 - 30133985
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    |||||||| ||||| |||||||    |||||||||||||| |||| ||||||||||||||||||||  |||||| |||||| ||||||    
T  30134072 gataacttgtgaaatcagcttaaagcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaaca 30133985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 18350742 - 18350796
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaattt 150  Q
    |||||||| ||||||| |||||||||||||||||| | |||||||||||||||||    
T  18350742 taagctctccatgatagcttatgaaaacagcttataacttatacgaaaacaattt 18350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 29363562 - 29363476
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgt 173  Q
    |||||| | |||||||| || |||||||||||| |||||||||| | | ||| ||||||| ||||| ||||||||||||| ||||||    
T  29363562 ttatttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattttatcttctgttgt 29363476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 27492818 - 27492738
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| |||||||||||| ||||| | ||||| ||||| | ||||||||||||| | |||||||| | ||||||||||||||    
T  27492818 gatagcttatgaaaacatcttattacttatatgaaaaaagtttgattttatttgaacttttgttatagaaatagtttatac 27492738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 12110404 - 12110325
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    |||||| | |||| ||| || |||| ||||||||||||||||||   |||||| |||||||||||| |||||||||||||    
T  12110404 ttattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 31002779 - 31002704
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| ||||||||||||   ||||| ||||| | ||||| ||||||||||||||||| || ||||||||||||||    
T  31002779 cttatcaaaacagcttatagcttatatgaaaatattttgactttattttatcttttgtggttgaaatagtttatac 31002704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 12835016 - 12835057
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  12835016 gaaaacaatttgactttattttatcttttgttgtagaaatag 12835057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 27700197 - 27700262
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgt 170  Q
    ||||||| |||||||||| |||||||   ||||||||||| |||||||| |||||||||| |||||    
T  27700197 catgatagcttatgaaaatagcttatagtttatacgaaaataatttgatgttattttatcatttgt 27700262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 30180063 - 30180002
Alignment:
Q  119 aaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||||   ||||||||||||||||| | |||||||||||||||| | ||||||||    
T  30180063 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgctatcgaaata 30180002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 5272893 - 5272957
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagtt 198  Q
    ||||| ||||||||| ||| || ||||||||||||||| |  ||||||||||||| |||||||||    
T  5272893 ttatatgaaaacaatgtgacttaattttatcttttgttatataaatagtttatacataaacagtt 5272957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 35536114 - 35536050
Alignment:
Q  124 agcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||| | ||||| ||||||||||||| ||||||||||||| |||| | ||||||| ||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatac 35536050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 27481319 - 27481465
Alignment:
Q  86 tttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttta 185  Q
    ||||||| | |||||| | ||||||| |||||||||| | |||||   ||||| | ||||| ||||| ||  ||||||| |||||| | ||||||| |||    
T  27481319 tttatttccataagctatccatgatagcttatgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagctta 27481418  T
Q  186 tacctaaacagttttatgataaacac--attctataagcacctaatt 230  Q
    ||| |||||| || ||| |||||||   || ||||||||||||||||    
T  27481419 tacataaacacttatataataaacatttatgctataagcacctaatt 27481465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 30812192 - 30812129
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaattt 150  Q
    |||||| | |||||||| ||||||| || |||||||||||||||   |||||||||||||||||    
T  30812192 ttatttccataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaacaattt 30812129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 44821977 - 44821930
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattt 160  Q
    |||||||||||||||||| | |||||| |||||||||||| |||||||    
T  44821977 cttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 4966201 - 4966107
Alignment:
Q  86 tttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||| | |||||||| || |||  ||||||||||||||||||   | ||| ||||||  |||||| |||||||||| |||||||| ||||||    
T  4966201 tttatttccataagctcttcaggatggcttatgaaaacagcttatacctaatatgaaaactgtttgatattattttatcctttgttgtggaaata 4966107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 22759235 - 22759109
Alignment:
Q  82 cttatttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    ||||||||||| | |||||||| |  |||| ||||||||| |||||| |   ||||| |||||||||||   |||||||||||||||||| |  ||||||    
T  22759235 cttatttatttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatag 22759136  T
Q  182 tttatacctaaacagttttatgataaa 208  Q
     ||| || |||||  || |||||||||    
T  22759135 cttaaacataaacgcttatatgataaa 22759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 34083575 - 34083633
Alignment:
Q  111 aacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    ||||||||||||||||||||   ||||||  ||||||||| | ||||||||||||||||    
T  34083575 aacttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttg 34083633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 39591540 - 39591586
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||| ||||||||||||| |||||||||||||||||| | ||||||    
T  39591540 ttatatgaaaacaatttgactttattttatcttttgttatagaaata 39591586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 47046181 - 47046227
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||| ||||||||||||| ||||||||||| |||||||| ||||||    
T  47046181 ttatatgaaaacaatttgactttattttatcctttgttgtagaaata 47046227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 946764 - 946715
Alignment:
Q  119 aaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| ||||| | | ||||||||||||||||| |||||||||||||||    
T  946764 aaaacaacttataactaatacgaaaacaatttgactttattttatctttt 946715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 3802197 - 3802266
Alignment:
Q  119 aaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||||| | ||||| |||||| |||||| ||||||||| ||||| || | ||||||| ||||||    
T  3802197 aaaacagcttataatttatatgaaaacgatttgactttattttaccttttattatagaaatagcttatac 3802266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 25827410 - 25827337
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||||||||||||||||   || |||  ||||||||| | ||||||||||| |||| ||| ||||||||||||    
T  25827410 cttatgaaaacagcttatagattttacacaaacaattttagtttattttatcgtttgctgtagaaatagtttat 25827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 27548286 - 27548225
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||| ||||||||||||||||||   ||| | |||||||||| || ||||||||||||||||    
T  27548286 gatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttg 27548225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 28440516 - 28440479
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  28440516 ttatacgaaaaccatttgactttattttatcttttgtt 28440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 38010731 - 38010674
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||||||||   ||||| ||||||||||||  ||| ||||||||||||||    
T  38010731 ttatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttttgtt 38010674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 39539834 - 39539907
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    ||||| ||||||||||||| ||||||||  ||||| || ||||||||| ||||||  || ||||| ||||||||    
T  39539834 ttatatgaaaacaatttgaatttattttcacttttattatcgaaatagcttatacaaaagcagttatatgataa 39539907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 23918954 - 23918918
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgt 170  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  23918954 ttatatgaaaacaatttgactttattttatcttttgt 23918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 28165135 - 28165051
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||| | |||||||| ||||||| ||||| || |||| ||||   |||||  |||||||||||| || |||||||||||||||    
T  28165135 ttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgtt 28165051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 28178960 - 28178912
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||| ||| |||||||||||||||||| | ||||||| ||||||    
T  28178960 gaaaacaatatgactttattttatcttttgttatagaaatagcttatac 28178912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 46104349 - 46104409
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||||||||||||||| ||||   ||||||||||||| |||   |||||||||||||||    
T  46104349 gataacttatgaaaacagtttatagcttatacgaaaacagtttagatttattttatctttt 46104409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 46825121 - 46825061
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||| ||||||||||| | ||||   ||||| ||||||||||||| |||||||||||||||    
T  46825121 gatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatctttt 46825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 33787780 - 33787877
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaa 193  Q
    |||||||| || ||||||||||||||||||||||| | ||||| |||| |||||||| ||| |||||| ||||||| | |||||||||||||| ||||    
T  33787780 taagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacataaa 33787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 29274281 - 29274375
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    ||||||||||||| ||||   ||||| ||||||||||||| |||||||||||||||| | | ||||||| |||||| ||| || || ||||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataa 29274375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 9093608 - 9093681
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||||||||||||||||   ||||||||||||||||| | |||||||||||||||| | | ||||||| ||||    
T  9093608 cttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 33500507 - 33500616
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||| ||||||||||| |||  | ||||||||||| | |||||   ||||| |||||||||| ||||||||||||| | ||||||| ||||    
T  33500507 ttatttccataagttctacatgatagcttgcggaaacagcttataacttatattgaaacagtttgattttactttatcttttgttatagaaatagcttat 33500606  T
Q  187 acctaaacag 196  Q
    || |||||||    
T  33500607 acataaacag 33500616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 2027432 - 2027516
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||  ||| ||||||||| || ||||||| ||||||||||  |||||| ||||| | ||||| ||||||||||||||||||    
T  2027432 ttatttatttaaactctacatgctagcttatgagaacagcttataggttatatgaaaatagtttgactttattttatcttttgtt 2027516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 24836228 - 24836331
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| ||||||| |||| ||||||   ||||   ||||||||||||||||||| |||||||||||||||||| | ||||||  ||||    
T  24836228 ttatttccataagctctccatgatagcttacgaaaac---ttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaataacttat 24836324  T
Q  187 acctaaa 193  Q
    || ||||    
T  24836325 acataaa 24836331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 32386589 - 32386712
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| || ||||||| ||||||||| | |||   ||||| |||||||||||||  |||||||||||||| ||   |||||||| |||    
T  32386589 ttattttcataagctctccaggataactaatgaaaacaacgtataccttatatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctat 32386688  T
Q  187 acctaaacagttttatgataaaca 210  Q
    || ||| || || |||||||||||    
T  32386689 acataagcacttatatgataaaca 32386712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 1401144 - 1401071
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgt 170  Q
    |||||||| ||||||| ||||||||||||||||||   |||||| ||| || |||||||||| ||||||||||||    
T  1401144 taagctctccatgatagcttatgaaaacagcttatagcttatactaaagcagtttgatttta-tttatcttttgt 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 7354221 - 7354147
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||||||||| |   ||||| ||||| | || ||||||||||||||||||||| | ||||||||||||||    
T  7354221 ttatgaaaacagcttgtatcttatatgaaaatagttcgattttattttatcttttgttatagaaatagtttatac 7354147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 20671938 - 20671992
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||||||||||||| |||||||||||||||| | | ||||||| ||||||    
T  20671938 ttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatac 20671992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 24782066 - 24782004
Alignment:
Q  124 agcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||||| | ||||| |||||||||||||||| ||||||||||||||| | ||||||| ||||    
T  24782066 agcttataacttatatgaaaacaatttgatttgattttatcttttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 31776312 - 31776377
Alignment:
Q  98 agctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttat 163  Q
    |||||| ||| ||| |||||||||||| ||||| | |||||| |||||||||||| ||||||||||    
T  31776312 agctctccattatagcttatgaaaacaacttattaattatacaaaaacaatttgactttattttat 31776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 3181105 - 3181177
Alignment:
Q  98 agctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgt 170  Q
    |||||| || |||||||||||||||||| ||||   ||||| ||||||  ||||| |||||||||||||||||    
T  3181105 agctctccaagataacttatgaaaacagtttatggtttatatgaaaacggtttgactttattttatcttttgt 3181177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 5329017 - 5328898
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | ||| |||| |||||||||||| ||||||||||||| | |||||  ||||   ||||| |||||||||||||||||| | ||||||  |||     
T  5329017 ttattttcataaactctccatgataacttacgaaaacagcttataa-ttatataaaaatggtttgactttattttatcttttgttatagaaataacttaa 5328919  T
Q  187 acctaaacagttttatgataa 207  Q
    || ||| || |||||||||||    
T  5328918 acgtaagcacttttatgataa 5328898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 281895 - 281958
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||| |||||||| |||||||||   ||||| |||||||| |||| ||||||||||||||||||    
T  281895 gatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgtt 281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 4248981 - 4248902
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    |||| |||| ||||||| |||||   |||||| ||| |||||||| |||||||||||||||||| | ||||||| |||||    
T  4248981 gatagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatcttttgttattgaaatagcttata 4248902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 10150304 - 10150375
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttt 184  Q
    |||||||||||| ||||| | | ||| |||||||||||||||| ||||||| ||||||| | || |||||||    
T  10150304 cttatgaaaacatcttataactgatatgaaaacaatttgatttgattttatattttgttatagatatagttt 10150375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 22742389 - 22742326
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||| |||| |||||||   ||||| ||||||||||||| ||||||||||| ||||||    
T  22742389 gataacttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgtt 22742326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 29269886 - 29269839
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||||| ||||||||||||| |||| | ||||||||||||||    
T  29269886 aaaacaatttgactttattttatcttctgttatagaaatagtttatac 29269839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 31624276 - 31624201
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| ||||||||| ||   ||||||||||||||||| |  ||||||||||||||||| | ||||||| ||||||    
T  31624276 cttattaaaacagctaatagattatacgaaaacaatttaaacttattttatcttttgttatagaaatagcttatac 31624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 31672547 - 31672614
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    ||||||| ||||| |||||||||| ||||||  | |||||||||||||| |||||| || ||||||||    
T  31672547 gaaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgataa 31672614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 33828672 - 33828617
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattt 160  Q
    ||||||| ||||| |||||| ||||| | ||||||||||||||||||| |||||||    
T  33828672 catgatagcttattaaaacaacttataacttatacgaaaacaatttgactttattt 33828617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 2735087 - 2735029
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||||||||||||||   |||||| |||| ||||| | ||||||||||||||||||    
T  2735087 cttatgaaaacagcttatagattatacaaaaataatttaactttattttatcttttgtt 2735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 7714022 - 7713968
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| ||||||||||||| |||||||||||||||||| |  || ||||||||||    
T  7714022 ttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatac 7713968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 8349744 - 8349810
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    |||||||||| | ||||||||||||||||||   ||||||||||||||  ||||| || ||||||||    
T  8349744 aaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataa 8349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 21959717 - 21959651
Alignment:
Q  142 aaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaa 208  Q
    |||||| |||| |||||||||||||||||| | ||||||| |||||| ||| || || |||||||||    
T  21959717 aaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcacttctatgataaa 21959651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 28088259 - 28088329
Alignment:
Q  98 agctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| ||||||| ||||||||||||| ||||   ||||| ||||||||| ||  |||||||||||||||    
T  28088259 agctctccatgatagcttatgaaaacagtttatagcttatatgaaaacaatctgcatttattttatctttt 28088329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 5550148 - 5550083
Alignment:
Q  115 tatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||||||||   ||||| ||||||||||||| ||||| |||||| || || ||||||||    
T  5550148 tatgaaaacagcttatagcttatatgaaaacaatttgactttatgttatctcttattatcgaaata 5550083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 14492325 - 14492264
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||||||||||||||||||||   || ||  |||||||||||| || |||||||||||||    
T  14492325 gataacttatgaaaacagcttatagcttgtatcaaaacaatttgacttcattttatcttttg 14492264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 27894037 - 27893984
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaac 194  Q
    |||||||||||| |||||||||| || |||||| ||||||| |||||| |||||    
T  27894037 aaaacaatttgactttattttatattctgttgtagaaatagcttatacataaac 27893984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 3155209 - 3155137
Alignment:
Q  98 agctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgt 170  Q
    |||||| || |||| |||||||||| |||||||  |||||| | ||||| ||||| ||| |||||||||||||    
T  3155209 agctctccaggatatcttatgaaaatagcttataggttatatggaaacagtttgactttgttttatcttttgt 3155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 4006737 - 4006665
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    |||| |||||||||||| |||||   |||||  |||||||||||| ||||||||||| |||||| | ||||||    
T  4006737 gatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 13908238 - 13908166
Alignment:
Q  135 tatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    ||||| |||||  ||||||||||||||||||| |||||| ||||||| ||||   ||| || |||||||||||    
T  13908238 tatacaaaaaccttttgattttattttatcttatgttgtagaaatagcttatttgtaagcacttttatgataa 13908166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 40304107 - 40304204
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaacac 211  Q
    ||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||| |  |||||| |||||||||| || |  ||||||||||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatacctaagcaataatatgataaacac 40304204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 15515587 - 15515505
Alignment:
Q  85 atttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttt 167  Q
    |||||||| | |||||| | |||||||||||||||||||| |||||   ||||||||||||| |||||||||||| |||||||    
T  15515587 atttatttccataagctatccatgataacttatgaaaacaacttatagcttatacgaaaacattttgattttattctatcttt 15515505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 36151578 - 36151637
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaa 193  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||| |||||| ||||    
T  36151578 ttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 33527194 - 33527272
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||||||||||||||||||||   ||||| ||||||| ||||| | |||||||||||||||| | ||||||| ||||    
T  33527194 gataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttat 33527272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 44032034 - 44032147
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    |||||||| || ||||||||| ||||| || ||||   ||||| ||||||||||||| ||||||||| |||||||| | ||||  | |||||| ||||||    
T  44032034 taagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaaca 44032133  T
Q  196 gttttatgataaac 209  Q
     || ||||||||||    
T  44032134 cttatatgataaac 44032147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 49517088 - 49516991
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttt-tatgataaac 209  Q
    ||||||||||||||||||   ||| | ||||||||||||| |||||||||||||||||| | ||||||  ||||||  ||||| ||| ||||||||||    
T  49517088 cttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgataaac 49516991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 17269287 - 17269201
Alignment:
Q  94 cgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    |||||||||| || |||| |||||||||||| |||||   ||||| ||||||||||||| ||||||||  |||||||| | ||||||    
T  17269287 cgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaata 17269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 30371166 - 30371108
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||| |||||   ||||| ||||||||||||| ||||||||||||||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatcttttgtt 30371108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 47877119 - 47877073
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||    
T  47877119 ttatatgaaaacaatttgattttattttatcttttgttattgaaata 47877073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 4256115 - 4256176
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    ||||||||||| ||||| | |||||| ||||||||||||| ||||||| |||||| ||||||    
T  4256115 ttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataaaca 4256176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 27738232 - 27738297
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaa 178  Q
    ||||||||||||  ||||   ||||| ||||||||||||| |||||||||||||||||||| ||||    
T  27738232 cttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgttgtagaaa 27738297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 4548755 - 4548684
Alignment:
Q  97 aagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    ||||||| || |||| |||||||||||||||||| | || ||  |||||| ||||| |||||||||||||||    
T  4548755 aagctctccaagatagcttatgaaaacagcttatgacttgtataaaaacagtttgactttattttatctttt 4548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 31517793 - 31517860
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    ||||||| |||||||||   ||||| |||| |||||| | |||||||||||||||||||| |||||||    
T  31517793 ttatgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgttgtagaaatag 31517860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 10233703 - 10233757
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||| |||||||  ||||| |||||||||| ||| ||||||||||||||    
T  10233703 ttatacgaaagcaatttgcatttatgttatcttttgctgtagaaatagtttatac 10233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 11560629 - 11560683
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    ||||||||||||||| ||||||||||||| | |  |||||| |||||||||||||    
T  11560629 aaaacaatttgatttgattttatcttttgctataaaaatagcttatacctaaaca 11560683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 16982016 - 16982082
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    |||||||||  | |||||||||||||||||| ||||||||  |||||| |||||| || ||||||||    
T  16982016 aaaacaattccactttattttatcttttgttatcgaaataagttatacataaacacttatatgataa 16982082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 27145808 - 27145862
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||||| ||||| | |||||||||||| ||||||| ||||||| ||||||    
T  27145808 ttatacgaaaataatttaaatttattttatctgttgttgtagaaatagcttatac 27145862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 43029482 - 43029528
Alignment:
Q  142 aaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| ||||| |||||||||||||||||||| ||||||| ||||||    
T  43029482 aaacagtttgaatttattttatcttttgttgtagaaataggttatac 43029528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 6932986 - 6933071
Alignment:
Q  86 tttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||| | |||||||| || || |||||||||||| | || || | || || ||||||||||||| |||||||||| |||||||    
T  6932986 tttatttccataagctcttcaggacaacttatgaaaagaactaataacttctatgaaaacaatttgactttattttatgttttgtt 6933071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 7218127 - 7218200
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    ||||||||||| |||||   ||||| ||||||||||||| ||||||||| ||||| || | ||||||| |||||    
T  7218127 ttatgaaaacaacttatagcttatatgaaaacaatttgactttattttaccttttattatggaaatagattata 7218200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 7273992 - 7274049
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||| ||||||||||| | || || ||||||||||||| ||||||| ||||||||||    
T  7273992 ttatggaaacagcttataacttgtatgaaaacaatttgactttatttcatcttttgtt 7274049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 10199460 - 10199513
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    |||||||||| ||||||||  ||||||||||| | ||||| |||||||||||||    
T  10199460 cttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatctt 10199513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 17628611 - 17628562
Alignment:
Q  119 aaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||||||||| | ||||| ||||||||||||| |||| ||||||||||    
T  17628611 aaaacagcttataatttatatgaaaacaatttgactttactttatctttt 17628562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 24915103 - 24915176
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||||||||||||||||    ||||| |||||||||| | ||||||||||||| || | | ||||||||||||    
T  24915103 cttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatcttctgctatagaaatagtttat 24915176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 28768093 - 28768040
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    ||||||||||| | ||||||||||||||||||| |||| || ||||| ||||||    
T  28768093 ttatacgaaaatagtttgattttattttatcttctgttatcaaaataatttata 28768040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 32435348 - 32435295
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    |||||||| ||| ||||| | || ||||||||||||||||||||||| ||||||    
T  32435348 cttatgaatacaacttataacttgtacgaaaacaatttgattttattctatctt 32435295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 4276680 - 4276768
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaa 193  Q
    ||||||| ||||||| ||||| ||||   ||||  ||||||| | ||| ||||| |||||||||||| | |||||||||||||| ||||    
T  4276680 catgatagcttatgagaacaggttatagcttatgtgaaaacagtatgactttatattatcttttgttatagaaatagtttatacttaaa 4276768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 5421954 - 5422046
Alignment:
Q  95 gtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    |||||||||  | |||| ||||| |||||| |||||   ||||| ||||||||||||| | |||||||||||||||  | ||||||| |||||    
T  5421954 gtaagctctctaagatagcttatcaaaacaacttatagcttataagaaaacaatttgactatattttatcttttgtcatggaaatagcttata 5422046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 7472355 - 7472256
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| || |||| |||||| |||||||||||   |||||| |||||||||| |  ||||| ||||||||||| | ||||||| ||||    
T  7472355 ttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaattt-aacttattatatcttttgttatagaaatagcttat 7472257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 14737784 - 14737824
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||||| |||||||||||||||||| | ||||||    
T  14737784 gaaaacaatttgactttattttatcttttgttatagaaata 14737824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 35179183 - 35179107
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttat 163  Q
    |||||| | |||| ||| ||| |||||||||||||||||||||| | ||| |||||||   ||||||| ||||||||    
T  35179183 ttattttcataagttctccataataacttatgaaaacagcttataacttaaacgaaaattgtttgattctattttat 35179107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 36070270 - 36070210
Alignment:
Q  111 aacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||||| |||||   |||| |||| ||||||| | ||||||||||||||||||    
T  36070270 aacttatgaaaacaacttatagcttatccgaagacaatttaactttattttatcttttgtt 36070210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 50319283 - 50319235
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||| |||| |||||||||||||||||| | ||||||| ||||||    
T  50319283 gaaaacaacttgactttattttatcttttgttatagaaatagcttatac 50319235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 51695542 - 51695601
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||| |||||||||||| || || | ||||||||||||||||| | |||||||||||||||    
T  51695542 gatagcttatgaaaacatctgataacttatacgaaaacaattt-actttattttatctttt 51695601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 32172679 - 32172596
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||| ||||||||||||||||||   ||||| | |||||| |||| || ||||||||||||||||| ||||||||||||||    
T  32172679 catgatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatac 32172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 3977328 - 3977270
Alignment:
Q  111 aacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    ||||||||||||||||||||  ||||||| |||||| |||||||||||||| |||||||    
T  3977328 aacttatgaaaacagcttatgggttatacaaaaacagtttgattttattttttcttttg 3977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 9202774 - 9202856
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||| | |||| ||| || |||||||||||||||||||||||   ||||| ||||||||||| | ||||||||||||||||    
T  9202774 ttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttg 9202856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 6582867 - 6582960
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacc 189  Q
    |||||||| || || ||||||||||||||| |||| | ||||| ||||| ||||| | || |||||| |||||||||| ||||||| |||||||    
T  6582867 taagctctgcaggaaaacttatgaaaacagtttataacttataagaaaaaaatttaacttcattttagcttttgttgtagaaatagcttatacc 6582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 12595501 - 12595578
Alignment:
Q  111 aacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||| ||| |||||||| | |||||||||||| |||||| |||||||||||||||| | | ||||||| ||||||    
T  12595501 aacttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 12595578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 28586824 - 28586893
Alignment:
Q  119 aaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||||| | ||||| ||||||| ||||| |||||||||||||||||| | |||||||| |||||    
T  28586824 aaaacagcttataatttatatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatac 28586893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 12975382 - 12975294
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttt 184  Q
    |||||||| || |||| |||||||| |||||||||   ||||| ||||||||||||||||||||||||  |||||| | | ||||||||    
T  12975382 taagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttattctttgttataggaatagttt 12975294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 14295540 - 14295456
Alignment:
Q  97 aagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    ||||||| || |||| |||| |||||||||||||   ||||| ||||||| ||||| |||||||||||||||||| | |||||||    
T  14295540 aagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 36639566 - 36639482
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||| | |||||||| || |||| |||||||||||||  ||| | || || ||||||| ||||||||||||||||||||||||    
T  36639566 ttattttcataagctcttcaagatagcttatgaaaacagtctataacttgtatgaaaacattttgattttattttatcttttgtt 36639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 42583172 - 42583100
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||| ||||||||||||||||||  ||| ||||||||||||| | ||||||| |||||||||| | ||||||    
T  42583172 gataaattatgaaaacagcttatcccttacacgaaaacaatttaactttatttcatcttttgttatagaaata 42583100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 10303819 - 10303747
Alignment:
Q  111 aacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttta 185  Q
    |||||||||||||| ||||   |||| | ||||||||||||| |||||||||||||||||| | |||||||||||    
T  10303819 aacttatgaaaacaacttag--gttaaatgaaaacaatttgactttattttatcttttgttatagaaatagttta 10303747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 19177505 - 19177403
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatga 204  Q
    ||||| |||||| ||||||| |||||   ||||| ||||||| || || || |||||||||| |||||| |||||||||||||| ||| || || |||||    
T  19177505 catgagaacttacgaaaacaacttatagcttatatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatga 19177406  T
Q  205 taa 207  Q
    |||    
T  19177405 taa 19177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 4014450 - 4014551
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||| ||| || |||| |||||||||||||||||||| || | | |||||||| | | |||||||||||||||| | | ||||||| ||||    
T  4014450 ttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatcttttgctatagaaatagcttat 4014549  T
Q  187 ac 188  Q
    ||    
T  4014550 ac 4014551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 12425615 - 12425534
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| | |||| ||| || |||| ||| ||||||||||||||   ||||||||||||||||| | |||||||||||||||    
T  12425615 ttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatctttt 12425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 38831514 - 38831563
Alignment:
Q  119 aaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| ||||||| ||||||||||||| ||||| |||||||||||||||    
T  38831514 aaaacaacttatcatttatacgaaaacagtttgactttattttatctttt 38831563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21768223 - 21768299
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttat 163  Q
    |||||| |||||||||| || ||||||||||||||||||||||    ||||| ||||||| | |||||| |||||||    
T  21768223 ttattttcgtaagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaacattatgatttaattttat 21768299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 35095859 - 35095907
Alignment:
Q  137 tacgaaaacaatttgattttattttatcttttgttgtcgaaatagttta 185  Q
    |||| ||||||||||| |||||||||||||||||| | |||||||||||    
T  35095859 tacggaaacaatttgactttattttatcttttgttatagaaatagttta 35095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 38047890 - 38047965
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagt-tatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||| || |||| |||||||||||||| ||| ||| |||| ||||| ||||||| ||||||||||||||||||    
T  38047890 taagctctccaggatagcttatgaaaacagcatat-agtatatatgaaaataatttgactttattttatcttttgtt 38047965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 7853653 - 7853602
Alignment:
Q  136 atacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    ||||| ||||||||| | |||||||||||||||||| | |||||||||||||    
T  7853653 atacggaaacaatttaactttattttatcttttgttatagaaatagtttata 7853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 10272483 - 10272538
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||||||||| |||||   ||||||||||||||||||| || ||||||||||||    
T  10272483 cttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatctttt 10272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 2568691 - 2568601
Alignment:
Q  98 agctctacatgataacttatgaaaacagcttatcagttatacg-aaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    |||||| ||||||| |||||||||||| |||||   ||||||| |||||||||| | ||| |||||| | ||||| | |||||||||||||    
T  2568691 agctctccatgatagcttatgaaaacaacttatagcttatacgaaaaacaatttaactttgttttatatcttgttatagaaatagtttata 2568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 18857452 - 18857534
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    ||||||||||||||||||   |||||  |||||||||||| ||||||||||| | |||| | ||||||| |||| | ||||||    
T  18857452 cttatgaaaacagcttatagattatagaaaaacaatttgactttattttatcgtgtgttattgaaatagcttattcataaaca 18857534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 29115306 - 29115360
Alignment:
Q  154 tttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaa 208  Q
    ||||||||| |||||||||| ||||||| |||||| ||| || ||||||||||||    
T  29115306 tttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaa 29115360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29117003 - 29117049
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||||| ||||| |||||||||||||||||| | ||||||    
T  29117003 ttatacgaaaacagtttgactttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 37063147 - 37063201
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| ||||| | ||||| |||||||||||||||||| | ||||||||||||||    
T  37063147 ttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatac 37063201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 11615505 - 11615468
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  11615505 ttatacgtaaacaatttgactttattttatcttttgtt 11615468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 11835270 - 11835213
Alignment:
Q  138 acgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    ||||||||||||| | |||||||||||||||||| |  |||| |||||||| ||||||    
T  11835270 acgaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaaca 11835213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 14932324 - 14932252
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||| | ||||||||||||| | ||||||||||   |||||| |||||||||| | ||||||||||||||||    
T  14932324 taagctttccatgataacttataacaacagcttatagcttatac-aaaacaatttaactttattttatcttttg 14932252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 18875396 - 18875323
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||||| || |||| ||||| |||||||||||| | || || |||| |||||||| |||||||| |||||||    
T  18875396 taagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgactttattttgtcttttg 18875323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 37588386 - 37588467
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| | |||||||| ||  |||||||||||||||| |||||   ||||| ||||||  |||||||| ||||||||||||    
T  37588386 ttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatctttt 37588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 39594851 - 39594771
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| | |||| || ||| |||| |||||||||||||||||  | |||| |||||||||||| | |||||||||||||||    
T  39594851 ttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaattt-actttattttatctttt 39594771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 42569031 - 42569088
Alignment:
Q  112 acttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||| ||||||| ||||   |||||||||||||||| || ||||||||||||||||    
T  42569031 acttatcaaaacagattatagcttatacgaaaacaattagactttattttatcttttg 42569088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 13224409 - 13224353
Alignment:
Q  151 gattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    ||||||||||||||||||||| | ||||||| |||||| ||| || || ||||||||    
T  13224409 gattttattttatcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 13604875 - 13604951
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttat 163  Q
    |||||| | |||||||| || ||||||||||||||||||||||    ||||| ||||||| | |||||| |||||||    
T  13604875 ttattttcataagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaacattatgatttaattttat 13604951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 32059642 - 32059694
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    |||||||||||||||||   ||||| ||||||| ||||| |||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatctt 32059694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 40120117 - 40120081
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgt 170  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  40120117 ttatatgaaaacaatttgatttgattttatcttttgt 40120081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 656803 - 656903
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcag-ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttta 185  Q
    |||||| | |||||||| || |||| ||||||||| || |||| ||| ||||||||||||||||||||| |||||||||||||||| | ||||||| |||    
T  656803 ttattttcataagctctgcaagatagcttatgaaatcaactta-cagcttatacgaaaacaatttgattatattttatcttttgttatagaaatagctta 656901  T
Q  186 ta 187  Q
    ||    
T  656902 ta 656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 11513924 - 11513856
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgt 173  Q
    ||||||| |||||||||||| |||||   ||||| ||||||||||||| ||||||||||||||||||||    
T  11513924 catgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgttgt 11513856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 27288675 - 27288596
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| ||||| |||||||||||||||||||||||||| | ||   |||||   ||||| |||||||||||||||||||||    
T  27288675 ttatttccgtaaactctacatgataacttatgaaaacagatcatagcttata--taaacagtttgattttattttatctttt 27288596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 9395174 - 9395093
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| | |||||||||||  |||||| |||||||||||||||   ||||| |||||||||||   |||||||||||||||    
T  9395174 ttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaacaatttagctttattttatctttt 9395093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 11863689 - 11863758
Alignment:
Q  100 ctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||| |||||||| | ||||||||||||||| | ||||| ||||||||||| | | ||||||||||||||    
T  11863689 ctctccatgataagtaatgaaaacagcttataaattatatgaaaacaatttaactctattttatcttttg 11863758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 35459907 - 35459830
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaacac 211  Q
    ||||||||||||||||||| |||||||||||||||| | |  |||||| ||||||  || || || ||||||||||||    
T  35459907 ttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataaacac 35459830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 34339950 - 34339866
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||| | |||||||| || ||  ||||||||||| || ||||   ||||||||||| ||||||| ||||||||||||||||||    
T  34339950 ttattttcttaagctctccaagaatacttatgaaaatagtttataccttatacgaaaataatttgactttattttatcttttgtt 34339866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 43965169 - 43965229
Alignment:
Q  109 ataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    ||||||||||||||||| |||  | ||||||||||||| | ||| ||||||||||||||||    
T  43965169 ataacttatgaaaacagattagaatttatacgaaaacattctgactttattttatcttttg 43965229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 1625942 - 1625871
Alignment:
Q  89 atttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattt 160  Q
    |||| |||||| ||| || |||| |||||||||||| ||||| | ||||||||||||||||| | |||||||    
T  1625942 attttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 3102729 - 3102614
Alignment:
Q  95 gtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaac 194  Q
    ||||| ||| |||||||| |||||||||||||| ||   |||||  |||| | ||||| |||||||||| ||||| | |  |||||| |||||| ||| |    
T  3102729 gtaagttctccatgataaattatgaaaacagctaatagattatataaaaatagtttgactttattttatattttgctataaaaatagcttatacataagc 3102630  T
Q  195 agttttatgataaaca 210  Q
    |||| |||||||||||    
T  3102629 agttatatgataaaca 3102614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 14209274 - 14209199
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaac 209  Q
    ||||| ||||||| ||||| |||||||||||||||||| | ||||||| ||| ||  ||||| || ||||||||||    
T  14209274 ttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataaac 14209199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 23143029 - 23143088
Alignment:
Q  112 acttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||||||||| || ||   ||||| |||||||||||||||| |||||||||||||||    
T  23143029 acttatgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgtt 23143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 23554819 - 23554878
Alignment:
Q  112 acttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||||||||| || ||   ||||| |||||||||||||||| |||||||||||||||    
T  23554819 acttatgaaaacaactaatagcttataagaaaacaatttgatttgattttatcttttgtt 23554878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 36415699 - 36415742
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttat 130  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||    
T  36415699 ttattttcgtaagttctacatgatagcttatgaaaacagcttat 36415742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 43259878 - 43259779
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| || |||| || ||||||||||||| |   |||||| ||||| |||||| ||||||||||||| |||| | ||||||| ||||    
T  43259878 ttatttccataagctcttcaagatacctaatgaaaacagcttgttgattatacaaaaactatttgactttattttatcttgtgttatagaaatagcttat 43259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 43529906 - 43529977
Alignment:
Q  116 atgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    ||||||||| |||||   ||||| |||| || |||||||||||||||||||||||| || || |||||||||    
T  43529906 atgaaaacaacttatagattataggaaagcagtttgattttattttatcttttgttatcaaagtagtttata 43529977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 4026861 - 4026779
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||| | |||| ||| || ||||| ||||||||||||||||| | |||| | |||| ||||| | ||||||||||||||||    
T  4026861 ttattttcataagttcttcaggataatttatgaaaacagcttataatttatgcaaaaataatttaactttattttatcttttg 4026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 12215784 - 12215750
Alignment:
Q  154 tttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||||||||||||| ||||||||||||||    
T  12215784 tttattttatcttttgttgtagaaatagtttatac 12215750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 35329907 - 35329969
Alignment:
Q  149 ttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaacac 211  Q
    |||| ||||||||||||| |||| | |||||||||||| | |||||| || ||||||||||||    
T  35329907 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacac 35329969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 35539740 - 35539686
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    ||||||||| ||||||| | ||||| ||||| | |||||||||||||||||||||    
T  35539740 ttatgaaaatagcttataacttatatgaaaatagtttgattttattttatctttt 35539686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 40759013 - 40758967
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    |||||||||||| |||||||||||||||||| | ||||||| |||||    
T  40759013 aaaacaatttgactttattttatcttttgttatggaaatagcttata 40758967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 43199431 - 43199365
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||| |||||   ||||||||| | ||||| | |||||||||||||||||||| ||||||    
T  43199431 ttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaata 43199365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 17380564 - 17380515
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtt 183  Q
    ||||||||||||||| ||| ||||||| ||||||||||||  ||||||||    
T  17380564 ttatacgaaaacaatatgaatttatttcatcttttgttgtaaaaatagtt 17380515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 22681238 - 22681295
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||||||||   ||||| ||||||||||||  ||| ||||||||||||||    
T  22681238 ttatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttttgtt 22681295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 40837502 - 40837555
Alignment:
Q  135 tatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| ||||||||||||| |||| ||||||||||||| | ||||||| ||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatac 40837555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 44438886 - 44438947
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    ||||||||||||| |||||||||   || ||| |||||| ||||| ||||||||||||||||    
T  44438886 gataacttatgaagacagcttatggcttgtacaaaaacagtttgactttattttatcttttg 44438947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 5133795 - 5133715
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||| ||||||||||||||   |||||  |||||| |||   |||||||||||||||||| | ||||||| ||||||    
T  5133795 gataacttttgaaaacagcttatatcttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatac 5133715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 15377783 - 15377727
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||||||||||||||| | ||||| ||||||||| | | ||||||||||| ||||    
T  15377783 cttatgaaaacagcttataacttatatgaaaacaatctaactttattttatcctttg 15377727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 28933847 - 28933767
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| ||||||||||||  |||| | ||| | ||||| |||||||||| ||||||||||||||| |  |||||| ||||||    
T  28933847 gatagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatac 28933767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 35099687 - 35099727
Alignment:
Q  148 tttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||||||||||||||||| | |||| |||||||||    
T  35099687 tttgattttattttatcttttgttatagaaacagtttatac 35099727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 9700023 - 9699944
Alignment:
Q  109 ataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| |||||||||||||||| | ||||  |||||||||||||  |||||||| |||||||| ||||||||| ||||||    
T  9700023 ataacatatgaaaacagcttataatttatttgaaaacaatttgaccttattttaacttttgttatcgaaatagcttatac 9699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 14482192 - 14482126
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||| ||| || || ||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataa 14482126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 12361214 - 12361156
Alignment:
Q  109 ataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttt 167  Q
    ||||||||||||||||||||||   ||||| ||||||||||||| || |||||||||||    
T  12361214 ataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatcttt 12361156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 11000634 - 11000687
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    |||| |||||||||||||| |||||||||||||||||| | ||||||| |||||    
T  11000634 ttattcgaaaacaatttgactttattttatcttttgttatggaaatagcttata 11000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 787144 - 787216
Alignment:
Q  99 gctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||| || |||||||||||||||||| ||||   ||||| || |||||||||| ||||||||||||| ||||    
T  787144 gctcttcaagataacttatgaaaacagtttatagcttatatgataacaatttgactttattttatcttatgtt 787216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 4763953 - 4763869
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    |||||||| || |||| ||||  ||||||||||||   ||||  ||||||  ||||| |||||||||||||||||||||||||||    
T  4763953 taagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatcttttgttgtcgaaata 4763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 30627949 - 30628029
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||||||||||| |||||   ||| ||  ||||||||| ||||||||||||||||||||   ||||||| ||||||    
T  30627949 gataacttatgaaaacaacttatagcttacacataaacaattttattttattttatcttttgttacagaaatagcttatac 30628029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 34551164 - 34551080
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||| | |||||||| || ||||||||| ||||||| ||||| | ||| | ||||||||||||| || || ||||||||||||    
T  34551164 ttattttcataagctctccaggataacttaagaaaacaacttataacttaaatgaaaacaatttgacttgatgttatcttttgtt 34551080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 34770915 - 34770839
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttt 184  Q
    |||| |||||||||||| |||||   ||| | ||||||||||||| |||||||||||||||||  | ||||||||||    
T  34770915 gatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagttt 34770839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 42215332 - 42215428
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtt 183  Q
    |||||||| |||||||| || |||| | |||||||| || ||||   |||||| |||||| ||||| ||||||||||||  |||||| |||||||||    
T  42215332 ttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagtttgactttattttatctcatgttgtagaaatagtt 42215428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 1470900 - 1470983
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||  |||||||||||||||||   ||||| ||||  ||||||| ||||||||||||||| || | ||||||| ||||||    
T  1470900 catgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatac 1470983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 3537104 - 3537139
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttg 169  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3537104 ttatacgaaaacaatttgactttattttatcttttg 3537139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 7630244 - 7630299
Alignment:
Q  109 ataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatc 164  Q
    |||||||||||||| ||||||| | |||||||| || ||||||| |||||||||||    
T  7630244 ataacttatgaaaatagcttataatttatacgacaataatttgactttattttatc 7630299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 6509338 - 6509408
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    |||||||| || |||| ||||||||||||||||||   |||||  || ||||||||| |||||||||||||    
T  6509338 taagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatctt 6509408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 4558843 - 4558734
Alignment:
Q  86 tttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttta 185  Q
    ||||||| | ||||||||  | |||| |||||| |||||||||||    |||| ||||| ||||| | ||||||||||||||| || | ||||||| |||    
T  4558843 tttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagctta 4558744  T
Q  186 tacctaaaca 195  Q
    ||| ||||||    
T  4558743 tacataaaca 4558734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 10383929 - 10383852
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatc 164  Q
    |||||| | ||||||||| ||||||  ||| ||||||||| |||   |||||||||||||  ||||||||||||||||    
T  10383929 ttatttccataagctctatatgatagtttacgaaaacagcatatagattatacgaaaacagcttgattttattttatc 10383852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 29699287 - 29699205
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||| | ||||||||  ||||||||||||| | ||| | || |||| ||||| |||||||||||||||||| | ||||||    
T  29699287 taagctctatacgataactt--gaaaacagcttataacttagatgacaacattttgactttattttatcttttgttatagaaata 29699205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 31862537 - 31862444
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    |||||| | ||||||||  | ||||||||||||||||| |||||   |||||||| || | ||||| ||||| |||||||||||| | ||||||    
T  31862537 ttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgactttatattatcttttgttattgaaata 31862444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 9834825 - 9834889
Alignment:
Q  97 aagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttatttt 161  Q
    |||||| ||| |||| |||||||||||| |||||   ||||| |||||||||||| |||||||||    
T  9834825 aagctcaacaagatagcttatgaaaacaacttatagcttatatgaaaacaatttggttttatttt 9834889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 29168940 - 29169000
Alignment:
Q  109 ataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||||||| ||||||||||||| |  ||||| |||| ||||| |||| |||||||||||||    
T  29168940 ataacttaggaaaacagcttataacatatacaaaaataatttaatttaattttatcttttg 29169000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 39392748 - 39392788
Alignment:
Q  148 tttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| |||||||||||||||||| | ||||||||||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttatac 39392788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 40280284 - 40280324
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  40280284 gaaaacaattttactttattttatcttttgttgtagaaata 40280324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 42597392 - 42597344
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||||| | |||||||||||||||||| | ||||||| ||||||    
T  42597392 gaaaacaattttactttattttatcttttgttatagaaatagcttatac 42597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 56480394 - 56480291
Alignment:
Q  85 atttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttt 184  Q
    |||||||| | |||||||| || ||||  ||||||||||||||||| | ||||||  ||||||||| | |||||||| ||||||||| | ||||||| ||    
T  56480394 atttattttcataagctctccaagatagtttatgaaaacagcttataacttatacataaacaatttaactttattttgtcttttgttatggaaatagctt 56480295  T
Q  185 atac 188  Q
    ||||    
T  56480294 atac 56480291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 10192317 - 10192229
Alignment:
Q  98 agctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| || |||| ||| |||||||| ||||| | ||||| ||||||||||||| |||||| ||||||||||| |  |||||||||||    
T  10192317 agctctccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttataaaaatagtttat 10192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 54325076 - 54325164
Alignment:
Q  100 ctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| ||||||| ||| |||||| |||||||   ||||| ||||||| ||||| |||||||||||||||||  | ||||||||||||||    
T  54325076 ctctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatac 54325164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 53626794 - 53626736
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||||||||||||||   ||||| ||||||| ||||| ||||||||||||||||||    
T  53626794 cttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgtt 53626736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 486074 - 486005
Alignment:
Q  139 cgaaaacaatttga-ttttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    |||||||||||||| ||||||||||||||||||| | |||||||  ||||| ||| || |||||||||||    
T  486074 cgaaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataa 486005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 3175974 - 3175913
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    |||| |||||||||||||||||| | |||   ||||||||||||| ||||||||||||||||    
T  3175974 gatagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttttg 3175913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 17884103 - 17884018
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    |||||||| ||  ||| |||||||||||| || || | |||||| |||||||||| | |||||||||||||||||| | |||||||    
T  17884103 taagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaatag 17884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 25885882 - 25885821
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttg 169  Q
    ||||||||||||||||| |||||   ||| ||||||||||||| | ||||||||||||||||    
T  25885882 gataacttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttg 25885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 32741327 - 32741392
Alignment:
Q  106 atgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||||||||||| | || | ||||||||||| | ||  ||||||||||||||||||||    
T  32741327 atgataacttatgaaaacagttcatgaattatacgaaaagatttaaattttattttatcttttgtt 32741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 52746882 - 52746950
Alignment:
Q  103 tacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||| |||| ||||||||||||||||||   ||| || |||||||||| | ||||||||||||||||||    
T  52746882 tacaagatagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatcttttgtt 52746950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 2996605 - 2996518
Alignment:
Q  99 gctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||| || |||| |||||||||||| ||||| | |||||  |||||||||||| | ||||||||||| |||| ||||| ||| ||||    
T  2996605 gctctccaagatagcttatgaaaacaacttataacttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttat 2996518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 42321919 - 42321989
Alignment:
Q  100 ctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||| ||| |||||||| ||||||| ||||| | ||||| ||||||||||||| ||||||||||| ||||||    
T  42321919 ctcttcattataactta-gaaaacaacttataatttatatgaaaacaatttgactttattttatcatttgtt 42321989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 18630703 - 18630625
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||| ||| |||||||| |||||   ||||| |||||| | |||| |||||||||||||||||| | ||||||||||||    
T  18630703 gatagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaatagtttat 18630625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 41088373 - 41088327
Alignment:
Q  142 aaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||||| | ||||||||||||||||||||  |||||||||||||    
T  41088373 aaacaattttactttattttatcttttgttgtgaaaatagtttatac 41088327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 45128363 - 45128437
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||||  ||||   ||||| || || |||||||||| ||||||||||||||| | ||||||||||||||    
T  45128363 ttatgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatac 45128437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 49219156 - 49219078
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaa 192  Q
    ||||||||||| |||||   ||||| ||||| ||||||| |||||||||| ||||||| | ||||||  ||||||||||    
T  49219156 ttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatacctaa 49219078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 4071879 - 4071830
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtt 183  Q
    ||||| ||||| ||||||| |||||||||||||||||| | |||||||||    
T  4071879 ttatatgaaaataatttgactttattttatcttttgttatagaaatagtt 4071830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 9680652 - 9680607
Alignment:
Q  143 aacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||| ||||||||||||||| || ||||||||| ||||||    
T  9680652 aacaatttgactttattttatcttttattatcgaaatagcttatac 9680607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 18628569 - 18628670
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| || |||||||||||||||||| |||| | |||||  |||||| ||||| | ||||||  ||||||||   |||||| |||||    
T  18628569 ttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttttccttttgttaaagaaataatttat 18628668  T
Q  187 ac 188  Q
    ||    
T  18628669 ac 18628670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 24929510 - 24929417
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    ||||||||||| |||||   || || ||||||| || || |||||||||||||||||| | ||||||||| ||||  ||||| || ||||||||    
T  24929510 ttatgaaaacaacttatagcttttatgaaaacagttagactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataa 24929417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 29194447 - 29194512
Alignment:
Q  105 catgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgt 170  Q
    |||||||||||| ||||| |  |||| | ||||| ||||| | |||||||||||||||||||||||    
T  29194447 catgataacttaagaaaataagttataacttatatgaaaatagtttgattttattttatcttttgt 29194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 30581703 - 30581784
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||| | ||| |||| || |||||||||| ||||||||||||   ||||||||||| | ||||| || ||||||||||||    
T  30581703 ttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatctttt 30581784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 41606170 - 41606109
Alignment:
Q  147 atttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaa 208  Q
    |||||| ||||||||||| |||||| || ||||||||| ||| |||||| || |||||||||    
T  41606170 atttgactttattttatcctttgttatcaaaatagtttttacataaacacttgtatgataaa 41606109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 34368867 - 34368819
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacc 189  Q
    |||||||||||| ||| |||||||||||||| | ||||||| |||||||    
T  34368867 aaaacaatttgactttgttttatcttttgttatagaaatagcttatacc 34368819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 46415839 - 46415919
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| |||||||||| | ||||| | || || ||||||| ||||||  |||||||||||||||| | ||||||| ||||||    
T  46415839 gatagcttatgaaaagaacttataacttgtatgaaaacagtttgatcctattttatcttttgttattgaaatagcttatac 46415919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 51044537 - 51044593
Alignment:
Q  140 gaaaacaa-tttgattttattttatcttttgttgtcgaaatagtttatacctaaaca 195  Q
    |||||||| ||||| |||||||||||||||||| | ||||||| |||||| ||||||    
T  51044537 gaaaacaagtttgactttattttatcttttgttatagaaatagcttatacataaaca 51044593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 52735166 - 52735082
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||| | |||||||| || |||| |||| ||||||| | ||| | ||||| ||||  ||||||| ||||||||||||||||||    
T  52735166 ttatttccataagctcttcaagatagcttacgaaaacaacatataacttatatgaaagtaatttgactttattttatcttttgtt 52735082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 55576014 - 55575963
Alignment:
Q  136 atacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| |||||||||||||||| |||||||||||||| | ||||||| ||||||    
T  55576014 atacaaaaacaatttgattttgttttatcttttgtt-tagaaatagcttatac 55575963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 237441 - 237347
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag 181  Q
    |||||| ||||||||||| | ||||||||||||||||| ||||| | ||| | ||| | ||||| ||||||||||||||| |||| | |||||||    
T  237441 ttatttccgtaagctctataggataacttatgaaaacaacttataacttacatgaatataattttattttattttatcttctgttatagaaatag 237347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 49254774 - 49254708
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||| ||||||||||||||||||||  |||||  ||||||||||||||||| | ||||||    
T  49254774 ttatgaaaacatcttatcagttatacgaaaaccttttgacattattttatcttttgttattgaaata 49254708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 22232870 - 22232769
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | ||||| |||||||||| |||||||||| ||||||  | ||||| ||||||| ||||| ||||||||||| |||||| |  |||||| ||||    
T  22232870 ttattttcataagccctacatgatagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatcatttgttatataaatagcttat 22232771  T
Q  187 ac 188  Q
    ||    
T  22232770 ac 22232769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 48286845 - 48286913
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatc 164  Q
    |||||||||||||||||||||||||||||| |||| | ||||| | ||||||||| | |||||| ||||    
T  48286845 taagctctacatgataacttatgaaaacagtttataacttatatggaaacaatttaactttattctatc 48286913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 188
Target Start/End: Complemental strand, 52619037 - 52618946
Alignment:
Q  97 aagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||| || |||| ||| |||||||||||||| | ||||| ||||||||||| | ||||||| ||| |||||| | ||||||| ||||||    
T  52619037 aagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaatttaactttatttaatcatttgttttagaaatagcttatac 52618946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 27792907 - 27792794
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcag-ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaac 194  Q
    ||||||||||||||||  ||||||||||| |||  ||| ||||| ||||| | |||||  ||||||||||||||||| | ||||||| |||||| ||| |    
T  27792907 taagctctacatgatagtttatgaaaacaacttg-cagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagc 27792809  T
Q  195 agttttatgataaac 209  Q
    | || ||||||||||    
T  27792808 acttatatgataaac 27792794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 32703135 - 32703061
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaa 208  Q
    ||||| ||||||||||||| ||||||||||||||| |  | ||||||| |||||| |||||| || |||||||||    
T  32703135 ttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataaa 32703061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 32555028 - 32555093
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgt 173  Q
    ||||||| ||||||||| |||||   ||||| ||||| ||||||| ||||||||||||||||||||    
T  32555028 gataactcatgaaaacaacttatagcttataggaaaataatttgactttattttatcttttgttgt 32555093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 20874351 - 20874431
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||| ||||||||||||||||||   ||||| ||||||||||  ||| ||||||| |||||||  | ||||||||||||||    
T  20874351 gatagcttatgaaaacagcttatagtttatatgaaaacaattatattgtattttagcttttgtcatagaaatagtttatac 20874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 48364958 - 48364998
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  48364958 gaaaacaatttgactttattttatcttttgttatcgaaata 48364998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 54775171 - 54775052
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | ||| |||| |||||||||||| ||||||||||||| | |||||  ||||   ||||| |||||||||||||||||| | ||||||  |||     
T  54775171 ttattttcataaactctccatgataacttacgaaaacagcttataa-ttatataaaaatggtttgactttattttatcttttgttatagaaataacttaa 54775073  T
Q  187 acctaaacagttttatgataa 207  Q
    || ||| || |||||||||||    
T  54775072 acgtaagcacttttatgataa 54775052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 24887318 - 24887409
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    |||||||| || |||| |||||||||||||||| |   ||||| ||| ||| ||||| |||||||||||| ||||| | ||||||| |||||    
T  24887318 taagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaatagcttata 24887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 31053153 - 31053200
Alignment:
Q  124 agcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    ||||||| | ||||||||||| || |||||||||||||||||||||||    
T  31053153 agcttataacttatacgaaaataaattgattttattttatcttttgtt 31053200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 36783386 - 36783469
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatag-tttatacctaaaca 195  Q
    ||||||||||||||| ||   ||||| ||||||||||| | |||||||||||||||| | | ||||||| ||||||| ||||||    
T  36783386 cttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctttatacataaaca 36783469  T

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Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 38462304 - 38462205
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataa 207  Q
    |||| ||||||||||||| ||||    |||| ||||||| ||||| |||||||||||||||| | | ||||||| |||||  |||||| || ||||||||    
T  38462304 gatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataa 38462205  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 1395668 - 1395614
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||| ||||| ||||||| |||||||||||||||||| | ||||||| ||||||    
T  1395668 ttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatac 1395614  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 37788878 - 37788820
Alignment:
Q  113 cttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgtt 171  Q
    |||||||||||| |||||   ||||||||||| |||| || ||||||||||||||||||    
T  37788878 cttatgaaaacaacttatagattatacgaaaataattggactttattttatcttttgtt 37788820  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 40665464 - 40665394
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    |||||||| || ||||||||||||||||| ||||| | ||| || |||| ||||| |||||| ||||||||    
T  40665464 taagctctccaagataacttatgaaaacatcttataacttacacaaaaataattttattttagtttatctt 40665394  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 43116515 - 43116577
Alignment:
Q  148 tttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaaca 210  Q
    |||||||| ||||||||||||||| | ||||||| ||| || |||||| || |||||||||||    
T  43116515 tttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataaaca 43116577  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 2128331 - 2128384
Alignment:
Q  141 aaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaac 194  Q
    |||||||||| | |||||||||||||||||| | ||||||| |||||| |||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaac 2128384  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 2318666 - 2318609
Alignment:
Q  109 ataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctt 166  Q
    ||||||||| |||||| |||||   ||||| |||||||||||||||| ||||||||||    
T  2318666 ataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttatctt 2318609  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 22214735 - 22214808
Alignment:
Q  115 tatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||||| |||||  |||||| ||| ||||||| | ||||||||||| |||||| | |||||| |||||||    
T  22214735 tatgaaaacaacttataggttatatgaatacaatttcactttattttatcctttgttatagaaataatttatac 22214808  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 25447291 - 25447368
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttta 185  Q
    |||| ||||||||||||| ||||   |||||| |||||||||| | |||||||||||||||  | | |||||||||||    
T  25447291 gatagcttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttttactatagaaatagttta 25447368  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 49586989 - 49587042
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttata 187  Q
    ||||| ||||||| ||||| |||||||||||||||||| | ||||||| |||||    
T  49586989 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 1816618 - 1816546
Alignment:
Q  96 taagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatctttt 168  Q
    |||||||| ||  ||| |||||||||||| |||||   |||||| |||||| ||||| |||||||||||||||    
T  1816618 taagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatctttt 1816546  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 15304420 - 15304472
Alignment:
Q  134 ttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||| ||||||||||| | |||||||||||||||||| | ||||||| ||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 16790435 - 16790503
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatagtttatacctaaacagttttatgataaa 208  Q
    ||||| |||||||||||||||||||| ||||| |  |||||| |||||| ||| || || |||||||||    
T  16790435 gaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataaa 16790503  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 25453912 - 25453983
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    ||||||||| || ||||  |||||||||||||| ||||| |||||||||||| || ||||| |||||| ||||    
T  25453912 ttatgaaaataggttataggttatacgaaaacagtttgactttattttatctgtt-ttgtcaaaatagattat 25453983  T

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Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 33405214 - 33405290
Alignment:
Q  108 gataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagttt 184  Q
    |||| ||||||||||||||||||   ||||| |||||||| || | ||||||||| |||||| | | ||||||||||    
T  33405214 gatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaatagttt 33405290  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 40122831 - 40122879
Alignment:
Q  140 gaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    ||||||| ||||| |||||||||||||||||| | ||||||| ||||||    
T  40122831 gaaaacagtttgactttattttatcttttgttattgaaatagcttatac 40122879  T

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Target: scaffold0654 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 6663 - 6783
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| ||| ||||||||| |||||| ||| | |  | || ||||||||||||| || | ||||| ||||||| | ||||||||||||    
T  6663 ttatttccataagctctgcataataacttatcaaaacaacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaatagtttat 6762  T
Q  187 acctaaacagttttatgataa 207  Q
    || ||| || || ||||||||    
T  6763 acataagcacttatatgataa 6783  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 116582 - 116702
Alignment:
Q  87 ttatttacgtaagctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttat 186  Q
    |||||| | |||||||| ||| ||||||||| |||||| ||| | |  | || ||||||||||||| || | ||||| ||||||| | ||||||||||||    
T  116582 ttatttccataagctctgcataataacttatcaaaacaacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaatagtttat 116681  T
Q  187 acctaaacagttttatgataa 207  Q
    || ||| || || ||||||||    
T  116682 acataagcacttatatgataa 116702  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 27593 - 27527
Alignment:
Q  114 ttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaata 180  Q
    ||||||||||| |||||   ||||| ||||||||||||| ||||||||||||| |||| | ||||||    
T  27593 ttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaata 27527  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 20210 - 20122
Alignment:
Q  100 ctctacatgataacttatgaaaacagcttatcagttatacgaaaacaatttgattttattttatcttttgttgtcgaaatagtttatac 188  Q
    |||||||| |||||||||||||||| || ||   ||||| || |||  ||||| |||||||||||||| ||| | |||||||| |||||    
T  20210 ctctacataataacttatgaaaacaactaatagcttatatgataactgtttgactttattttatctttggttatagaaatagtatatac 20122  T

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