View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_high_129 (Length: 240)
Name: NF16091_high_129
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_high_129 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 7989038 - 7989259
Alignment:
| Q |
19 |
tagcacccatcacaccaatccttcccacctatgagtggaaatttgaattcttgccctatcaagcctttccattgatgcagtctcctcatcatagtcaaga |
118 |
Q |
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| T |
7989038 |
tagcacccatcacaccaatccttcccacctatgagtggaaatttgaattcttgccctatcaagcctttccattgatgcagtctcctcatcatagtcaaga |
7989137 |
T |
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| Q |
119 |
aaatctccgaacaaagatcccacctttatgaagaagctctcctcccacacatgaagaggaattcccactagtgcaaatcagggggtacaagacatgattt |
218 |
Q |
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| T |
7989138 |
aaatctccgaacaaagatcccacctttatgaagaagctttcctcccacacatgaagaggaattcccactactgcaaatcagggggtacaagacatgattt |
7989237 |
T |
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| Q |
219 |
ttaaagttttaagacctgtttt |
240 |
Q |
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| T |
7989238 |
ttaaagttttaagacctgtttt |
7989259 |
T |
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