View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_high_134 (Length: 236)
Name: NF16091_high_134
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_high_134 |
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Alignment Details
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 18648650 - 18648467
Alignment:
| Q |
43 |
ggtaggtatcagaaagcgaaaatggcttaacggaagatggttccggtcactggggaacaatactcattcaattaagtcaatgctatttttcaaaaaataa |
142 |
Q |
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| T |
18648650 |
ggtaggtatcaggaagcgaaaatggcttaacggaagatggttccgatcgctggggaacaatactcattcaattaagtcaatgctatttttcaaaaaataa |
18648551 |
T |
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| Q |
143 |
----------gcctatgttaaatatttcaatatgtgccttgagacctaagaaaaacaacataaaaagaaagacatggtaaatgt |
216 |
Q |
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| T |
18648550 |
ataaaaatatgcctatgttaaatatttcaatatgtgccttgagacccaagaaaaacaacataaaaagaaagacatggtaaatgt |
18648467 |
T |
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