View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_high_146 (Length: 226)
Name: NF16091_high_146
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_high_146 |
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Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 6545433 - 6545629
Alignment:
| Q |
19 |
tttctcatgagaataagaggaaacatgatgagaagaagagtgaaaggtacaagaaaaacacttttggttgtttttcttgttgtgtacttcccattgagaa |
118 |
Q |
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| T |
6545433 |
tttctcatgagaataagaggaaacatgatgagaagaagagtgaatggtacaagaaaaacacttttggttgtttttcttgttgtgtacttcccattgagaa |
6545532 |
T |
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| Q |
119 |
tctcattggtttgaaacttcatggttgagataaattttgaatataaaactttgatgaaacagtttatataaatgttggtaacttttgttatgatttt |
215 |
Q |
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| T |
6545533 |
tctcattggtttgaaacttcatggttgagataaattttgaatataaaactttgatgaaacagtttatataaatgttggtaacttttgttatgatttt |
6545629 |
T |
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