View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_high_162 (Length: 204)
Name: NF16091_high_162
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_high_162 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 22155733 - 22155915
Alignment:
| Q |
22 |
atgatgacaaaaatacaatactaatattaacattttaagttgttgaatattatttgaaatacaatttttctcaaatctctgtttatattatcaatgttta |
121 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||| |
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| T |
22155733 |
atgatgacaaaaatacaatactaatattaacattttaagttgttgaatattatttgaaatagagtttttctctaatctctgtttatattatcaatgttta |
22155832 |
T |
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| Q |
122 |
aattagtaattgcactaacccaataactgaaattaagttatacaaagaagaaacatagagtaaatatatgttagcacaatact |
204 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
22155833 |
aattagtaattgtactaacccaataactgaaattaagttatacaaagaagaaacatagagtatatatatgttagcacaatact |
22155915 |
T |
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