View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_low_152 (Length: 227)
Name: NF16091_low_152
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_low_152 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 51341886 - 51342086
Alignment:
| Q |
5 |
gctggcataacacaaagtggaaaaatggaataaaagacccaaccagggaggaaatcatagaccaaaacaacaccagacatagtagaaaacagacccatga |
104 |
Q |
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| T |
51341886 |
gctggcataacacaaagtggaaaaatggaataaaagacccaaccagggaggaaatcatagaccaaaacaacaccagacatagtagaaaacaaacccatga |
51341985 |
T |
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| Q |
105 |
ccaaagcagaggcataaaggaacaagtatcctattgtcatccttgttatcctcgaatacacataacctcctgttaacctccaagttgaagggagaataac |
204 |
Q |
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| T |
51341986 |
ccaaagcagaggcataaaggaacaagtatcctattgtcatccttgttatcctcgaatacacataacctcctgttaacctccaagttgaagggagaataac |
51342085 |
T |
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| Q |
205 |
t |
205 |
Q |
| |
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| T |
51342086 |
t |
51342086 |
T |
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