View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_low_168 (Length: 210)
Name: NF16091_low_168
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_low_168 |
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Alignment Details
Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17164961 - 17164809
Alignment:
| Q |
1 |
atctgtcgattttaccaaacagtgccatactccatacctctaagttacttctgtgggactgtgttactccataccgataagttacttatttgttaggaga |
100 |
Q |
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| T |
17164961 |
atctgtcgattttaccaaacagtgccttactccataccactaagttacttctttgagactgtgttactccattccgctaagttacttatttgttaggaga |
17164862 |
T |
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| Q |
101 |
atttgttatgccattacatattggtggaaatgaaaattttgaaatcacatagg |
153 |
Q |
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| T |
17164861 |
atttgttatgccattacatattggtggaaatgaaaattttgaaatcacatagg |
17164809 |
T |
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