View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16091_low_49 (Length: 426)

Name: NF16091_low_49
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16091_low_49
NF16091_low_49
[»] chr7 (88 HSPs)
chr7 (277-426)||(21729585-21729734)
chr7 (107-251)||(21729769-21729914)
chr7 (104-251)||(17968086-17968234)
chr7 (104-251)||(20120091-20120240)
chr7 (104-251)||(28589365-28589514)
chr7 (104-251)||(44459071-44459220)
chr7 (104-251)||(725301-725450)
chr7 (104-251)||(9663369-9663518)
chr7 (104-251)||(18994735-18994884)
chr7 (104-251)||(41858317-41858466)
chr7 (104-251)||(23594337-23594487)
chr7 (106-251)||(47909157-47909304)
chr7 (104-251)||(3415923-3416072)
chr7 (104-251)||(16277338-16277487)
chr7 (104-251)||(46555263-46555412)
chr7 (104-251)||(48951946-48952095)
chr7 (104-251)||(30759861-30760013)
chr7 (104-249)||(48683328-48683475)
chr7 (104-251)||(4925006-4925155)
chr7 (104-251)||(21815467-21815616)
chr7 (104-251)||(48607399-48607548)
chr7 (104-251)||(46936052-46936202)
chr7 (104-251)||(33246407-33246556)
chr7 (104-251)||(40015455-40015604)
chr7 (104-251)||(46000776-46000925)
chr7 (104-251)||(41336367-41336517)
chr7 (104-248)||(44882822-44882968)
chr7 (288-385)||(46000569-46000666)
chr7 (104-251)||(47503687-47503839)
chr7 (288-385)||(40015712-40015809)
chr7 (288-385)||(41336164-41336261)
chr7 (288-385)||(725560-725658)
chr7 (283-385)||(16277596-16277698)
chr7 (283-385)||(33246672-33246774)
chr7 (288-385)||(3416173-3416269)
chr7 (288-385)||(18995005-18995102)
chr7 (291-371)||(21815270-21815350)
chr7 (283-371)||(44459326-44459414)
chr7 (104-172)||(44522702-44522770)
chr7 (288-371)||(4924810-4924893)
chr7 (291-385)||(30760092-30760187)
chr7 (288-371)||(46555519-46555602)
chr7 (288-385)||(20119919-20120016)
chr7 (287-385)||(9663625-9663724)
chr7 (291-371)||(4859632-4859712)
chr7 (288-371)||(44882630-44882714)
chr7 (288-372)||(48952204-48952288)
chr7 (303-385)||(28589645-28589727)
chr7 (291-371)||(17968338-17968419)
chr7 (288-385)||(41858581-41858678)
chr7 (315-380)||(43542568-43542633)
chr7 (311-371)||(586118-586178)
chr7 (295-385)||(47909383-47909470)
chr7 (288-367)||(48683128-48683208)
chr7 (285-367)||(8393344-8393433)
chr7 (287-385)||(10934704-10934803)
chr7 (287-385)||(48607651-48607750)
chr7 (311-381)||(1602355-1602425)
chr7 (195-251)||(41289464-41289521)
chr7 (288-385)||(41289597-41289694)
chr7 (315-371)||(37708325-37708381)
chr7 (315-371)||(38229729-38229785)
chr7 (315-371)||(41405998-41406054)
chr7 (315-371)||(47254711-47254767)
chr7 (307-385)||(8391485-8391563)
chr7 (138-251)||(44521175-44521294)
chr7 (138-251)||(46935366-46935485)
chr7 (120-177)||(8393266-8393323)
chr7 (314-371)||(19063965-19064022)
chr7 (139-251)||(41289237-41289355)
chr7 (315-371)||(33979422-33979478)
chr7 (315-371)||(33982555-33982611)
chr7 (315-371)||(38224397-38224453)
chr7 (311-371)||(43545125-43545185)
chr7 (216-251)||(724613-724648)
chr7 (216-251)||(4658181-4658216)
chr7 (307-385)||(23592584-23592660)
chr7 (216-251)||(28588694-28588729)
chr7 (287-371)||(5374514-5374600)
chr7 (138-184)||(30759239-30759285)
chr7 (218-251)||(8392548-8392581)
chr7 (302-347)||(46934312-46934357)
chr7 (315-371)||(584759-584815)
chr7 (315-371)||(596339-596395)
chr7 (104-144)||(5374275-5374315)
chr7 (319-371)||(41408132-41408184)
chr7 (311-371)||(47252026-47252086)
chr7 (310-385)||(47505629-47505702)
[»] chr8 (92 HSPs)
chr8 (101-251)||(28085712-28085864)
chr8 (101-251)||(30105849-30106001)
chr8 (104-247)||(30556504-30556648)
chr8 (104-251)||(3850136-3850285)
chr8 (104-251)||(4622558-4622707)
chr8 (104-251)||(3704945-3705094)
chr8 (104-251)||(13141120-13141269)
chr8 (104-251)||(42645425-42645574)
chr8 (104-251)||(42735703-42735852)
chr8 (102-251)||(16096018-16096169)
chr8 (104-249)||(17948308-17948455)
chr8 (104-251)||(276841-276990)
chr8 (104-251)||(638859-639008)
chr8 (104-251)||(824665-824814)
chr8 (104-251)||(15883236-15883385)
chr8 (104-251)||(23346978-23347127)
chr8 (104-251)||(25583416-25583565)
chr8 (104-251)||(43694982-43695131)
chr8 (104-251)||(2082089-2082238)
chr8 (101-251)||(45409028-45409178)
chr8 (104-251)||(6093433-6093582)
chr8 (104-251)||(39858119-39858268)
chr8 (104-251)||(41545081-41545230)
chr8 (282-385)||(28085895-28085998)
chr8 (284-385)||(30105706-30105807)
chr8 (104-251)||(18955353-18955502)
chr8 (104-251)||(27912503-27912652)
chr8 (104-251)||(27958922-27959071)
chr8 (107-251)||(44256202-44256348)
chr8 (283-385)||(18089436-18089538)
chr8 (288-385)||(17853351-17853448)
chr8 (287-385)||(39857904-39858002)
chr8 (288-385)||(2082349-2082446)
chr8 (288-385)||(15883492-15883589)
chr8 (104-213)||(40304190-40304300)
chr8 (285-385)||(23347211-23347311)
chr8 (288-371)||(4622819-4622902)
chr8 (294-385)||(6093228-6093319)
chr8 (290-385)||(13141375-13141470)
chr8 (288-383)||(43695245-43695340)
chr8 (288-385)||(276624-276721)
chr8 (288-385)||(639128-639225)
chr8 (288-385)||(824934-825031)
chr8 (288-385)||(16095813-16095910)
chr8 (288-385)||(18955140-18955237)
chr8 (287-371)||(3846559-3846643)
chr8 (288-385)||(3705200-3705297)
chr8 (288-385)||(27911928-27912025)
chr8 (288-385)||(27958347-27958444)
chr8 (287-385)||(40304476-40304574)
chr8 (288-385)||(17948573-17948670)
chr8 (288-385)||(44256000-44256097)
chr8 (288-385)||(25583679-25583778)
chr8 (291-385)||(30556757-30556852)
chr8 (288-369)||(38577121-38577202)
chr8 (143-251)||(38576901-38577010)
chr8 (302-371)||(39068889-39068958)
chr8 (138-251)||(45408350-45408469)
chr8 (314-371)||(23625710-23625767)
chr8 (192-251)||(18089335-18089395)
chr8 (315-371)||(19143158-19143214)
chr8 (315-371)||(29725548-29725604)
chr8 (315-371)||(31642982-31643038)
chr8 (302-385)||(39859889-39859970)
chr8 (288-371)||(42734701-42734785)
chr8 (308-371)||(38060861-38060924)
chr8 (302-385)||(40618435-40618518)
chr8 (126-251)||(5586969-5587096)
chr8 (104-154)||(18089273-18089323)
chr8 (315-381)||(38362464-38362530)
chr8 (288-385)||(41544882-41544980)
chr8 (138-251)||(42646152-42646271)
chr8 (138-251)||(43694285-43694404)
chr8 (293-385)||(45409223-45409316)
chr8 (192-251)||(23346288-23346352)
chr8 (315-371)||(26951247-26951303)
chr8 (315-367)||(38364709-38364761)
chr8 (315-371)||(41671438-41671494)
chr8 (307-385)||(3703215-3703291)
chr8 (216-251)||(16096581-16096616)
chr8 (307-385)||(26965411-26965487)
chr8 (216-251)||(27913305-27913340)
chr8 (216-251)||(27959724-27959759)
chr8 (138-248)||(30555810-30555926)
chr8 (325-371)||(15825127-15825173)
chr8 (302-371)||(15825858-15825928)
chr8 (302-371)||(38097939-38098008)
chr8 (300-371)||(5586805-5586877)
chr8 (215-251)||(30111645-30111681)
chr8 (302-385)||(30554749-30554830)
chr8 (315-371)||(35019295-35019351)
chr8 (215-251)||(40303489-40303525)
[»] chr4 (84 HSPs)
chr4 (104-251)||(34073102-34073250)
chr4 (104-251)||(16664729-16664878)
chr4 (104-251)||(13534393-13534542)
chr4 (104-251)||(3035643-3035792)
chr4 (104-251)||(4653041-4653190)
chr4 (104-251)||(17361210-17361359)
chr4 (104-251)||(20786864-20787013)
chr4 (104-251)||(46717778-46717927)
chr4 (104-251)||(52447458-52447607)
chr4 (104-251)||(54919467-54919616)
chr4 (104-248)||(20353904-20354050)
chr4 (104-251)||(8939485-8939634)
chr4 (104-251)||(23419134-23419283)
chr4 (104-251)||(35824606-35824755)
chr4 (107-251)||(49873804-49873950)
chr4 (104-251)||(23933384-23933533)
chr4 (288-385)||(8939275-8939372)
chr4 (107-251)||(31292434-31292580)
chr4 (104-251)||(30827332-30827481)
chr4 (104-251)||(31309712-31309861)
chr4 (104-251)||(49970053-49970202)
chr4 (107-242)||(50496016-50496158)
chr4 (104-251)||(27962273-27962420)
chr4 (285-371)||(3035862-3035948)
chr4 (288-385)||(49970310-49970407)
chr4 (288-385)||(54919274-54919371)
chr4 (281-385)||(31309459-31309562)
chr4 (104-184)||(35045137-35045217)
chr4 (287-385)||(46717579-46717677)
chr4 (287-385)||(49873594-49873692)
chr4 (288-385)||(4652833-4652930)
chr4 (288-371)||(30827597-30827680)
chr4 (283-385)||(7487108-7487210)
chr4 (288-385)||(16664528-16664625)
chr4 (288-385)||(20354162-20354259)
chr4 (288-385)||(27962526-27962623)
chr4 (288-385)||(31292688-31292785)
chr4 (122-184)||(7487422-7487484)
chr4 (288-385)||(20787128-20787225)
chr4 (288-385)||(41041529-41041626)
chr4 (287-385)||(13534649-13534748)
chr4 (288-385)||(23419392-23419490)
chr4 (287-385)||(23933641-23933739)
chr4 (288-385)||(17361008-17361105)
chr4 (288-371)||(35044944-35045028)
chr4 (302-371)||(30114336-30114405)
chr4 (288-385)||(52447246-52447342)
chr4 (302-381)||(8840269-8840349)
chr4 (192-251)||(41041359-41041419)
chr4 (284-342)||(17519970-17520029)
chr4 (315-381)||(7111098-7111164)
chr4 (313-371)||(14270056-14270114)
chr4 (302-372)||(43590311-43590381)
chr4 (315-381)||(43594753-43594819)
chr4 (302-371)||(7113801-7113870)
chr4 (302-371)||(26923760-26923829)
chr4 (104-157)||(55450950-55451003)
chr4 (315-367)||(8081160-8081212)
chr4 (315-371)||(19871194-19871250)
chr4 (315-371)||(26917692-26917748)
chr4 (315-371)||(40846754-40846810)
chr4 (315-371)||(51943645-51943701)
chr4 (138-252)||(46718505-46718625)
chr4 (282-347)||(50496210-50496274)
chr4 (294-385)||(34072899-34072992)
chr4 (315-381)||(38623572-38623638)
chr4 (315-381)||(43940339-43940405)
chr4 (287-371)||(35824383-35824468)
chr4 (288-333)||(55451049-55451094)
chr4 (315-371)||(19869767-19869823)
chr4 (315-371)||(24577873-24577929)
chr4 (302-385)||(27956572-27956653)
chr4 (302-385)||(43304793-43304874)
chr4 (307-347)||(49649329-49649369)
chr4 (307-371)||(50494810-50494873)
chr4 (216-251)||(7488137-7488172)
chr4 (314-385)||(13861881-13861952)
chr4 (316-367)||(49645839-49645890)
chr4 (138-184)||(34073801-34073847)
chr4 (315-381)||(51940895-51940961)
chr4 (309-385)||(34074916-34074990)
chr4 (315-371)||(10659119-10659175)
chr4 (315-371)||(10873264-10873320)
chr4 (315-371)||(50792659-50792715)
[»] chr3 (121 HSPs)
chr3 (101-251)||(53778180-53778332)
chr3 (104-251)||(16008874-16009023)
chr3 (104-251)||(41101757-41101906)
chr3 (104-251)||(37219909-37220058)
chr3 (104-251)||(47912754-47912903)
chr3 (104-251)||(50548295-50548444)
chr3 (101-251)||(45170081-45170233)
chr3 (104-251)||(4232891-4233040)
chr3 (104-247)||(18410306-18410451)
chr3 (104-251)||(27321094-27321243)
chr3 (104-251)||(30043299-30043448)
chr3 (104-251)||(37181782-37181931)
chr3 (104-251)||(44843009-44843158)
chr3 (104-251)||(51722612-51722761)
chr3 (108-249)||(37785525-37785668)
chr3 (104-251)||(3892496-3892649)
chr3 (104-251)||(16464005-16464154)
chr3 (104-251)||(41697908-41698057)
chr3 (104-251)||(43338435-43338584)
chr3 (104-251)||(22428751-22428900)
chr3 (101-244)||(23019881-23020026)
chr3 (104-251)||(27126296-27126445)
chr3 (104-247)||(30440103-30440248)
chr3 (104-251)||(13213547-13213697)
chr3 (104-251)||(27325471-27325620)
chr3 (104-251)||(27331708-27331857)
chr3 (104-251)||(45053531-45053680)
chr3 (133-251)||(15084404-15084524)
chr3 (108-251)||(38696937-38697076)
chr3 (286-371)||(22428944-22429029)
chr3 (104-251)||(11121687-11121836)
chr3 (282-385)||(55411140-55411243)
chr3 (104-251)||(55411283-55411428)
chr3 (288-385)||(27320899-27320996)
chr3 (104-248)||(30363492-30363638)
chr3 (104-248)||(38235597-38235742)
chr3 (107-251)||(40423780-40423921)
chr3 (288-371)||(40906056-40906139)
chr3 (283-385)||(44843262-44843364)
chr3 (292-385)||(3892757-3892850)
chr3 (107-251)||(22604952-22605100)
chr3 (288-385)||(37785326-37785423)
chr3 (288-385)||(41101551-41101648)
chr3 (288-385)||(50548563-50548660)
chr3 (282-371)||(53778372-53778460)
chr3 (291-385)||(8852222-8852316)
chr3 (107-240)||(10827542-10827677)
chr3 (291-385)||(22604758-22604852)
chr3 (288-385)||(11121119-11121216)
chr3 (288-385)||(30440355-30440452)
chr3 (288-385)||(38235386-38235483)
chr3 (288-385)||(53845173-53845270)
chr3 (104-184)||(6175461-6175541)
chr3 (283-371)||(16008677-16008765)
chr3 (291-371)||(16463810-16463890)
chr3 (283-385)||(15084634-15084737)
chr3 (288-385)||(2217918-2218014)
chr3 (288-385)||(13213333-13213430)
chr3 (288-385)||(18410099-18410196)
chr3 (288-385)||(30043561-30043657)
chr3 (288-385)||(37220175-37220272)
chr3 (131-251)||(42826083-42826205)
chr3 (104-251)||(8851597-8851744)
chr3 (288-367)||(27126104-27126182)
chr3 (291-385)||(38696737-38696832)
chr3 (288-385)||(6177280-6177377)
chr3 (288-385)||(23019725-23019821)
chr3 (288-385)||(41698160-41698257)
chr3 (285-385)||(10827707-10827807)
chr3 (294-385)||(37182356-37182445)
chr3 (288-371)||(47913025-47913107)
chr3 (289-371)||(40423558-40423639)
chr3 (302-371)||(55136571-55136640)
chr3 (288-371)||(4233119-4233200)
chr3 (315-371)||(39132389-39132445)
chr3 (311-371)||(43359511-43359571)
chr3 (302-381)||(42877038-42877117)
chr3 (311-369)||(6488982-6489040)
chr3 (288-385)||(27239130-27239228)
chr3 (138-251)||(37181118-37181237)
chr3 (288-385)||(43338261-43338359)
chr3 (195-251)||(2218124-2218181)
chr3 (315-371)||(22977887-22977943)
chr3 (192-251)||(30362727-30362791)
chr3 (311-371)||(32001174-32001234)
chr3 (315-371)||(41889655-41889711)
chr3 (315-371)||(43357909-43357965)
chr3 (315-371)||(50935520-50935576)
chr3 (104-151)||(2218179-2218226)
chr3 (137-251)||(2218794-2218910)
chr3 (288-367)||(45053782-45053860)
chr3 (136-251)||(22605664-22605784)
chr3 (126-251)||(22732456-22732583)
chr3 (138-251)||(31312755-31312874)
chr3 (199-251)||(27238956-27239009)
chr3 (302-371)||(54409419-54409488)
chr3 (315-371)||(7041628-7041684)
chr3 (307-367)||(10825811-10825871)
chr3 (215-251)||(11122489-11122525)
chr3 (216-252)||(38697741-38697777)
chr3 (192-251)||(40906249-40906309)
chr3 (315-371)||(42163352-42163408)
chr3 (288-320)||(42825976-42826008)
chr3 (325-385)||(45169862-45169922)
chr3 (315-367)||(50938470-50938522)
chr3 (216-251)||(8850908-8850943)
chr3 (289-368)||(27325730-27325809)
chr3 (289-368)||(27331967-27332046)
chr3 (216-251)||(30042615-30042650)
chr3 (216-251)||(38236407-38236442)
chr3 (216-251)||(40907027-40907062)
chr3 (216-251)||(45052843-45052878)
chr3 (316-371)||(48071782-48071837)
chr3 (216-251)||(50610327-50610362)
chr3 (302-385)||(53776446-53776528)
chr3 (139-184)||(51722006-51722051)
chr3 (139-184)||(55412018-55412063)
chr3 (302-385)||(3890817-3890898)
chr3 (300-371)||(22732675-22732747)
chr3 (302-342)||(43860556-43860596)
chr3 (315-371)||(43863124-43863180)
[»] chr5 (57 HSPs)
chr5 (104-251)||(27550840-27550989)
chr5 (104-251)||(12499461-12499610)
chr5 (104-251)||(37270489-37270638)
chr5 (104-251)||(42612058-42612207)
chr5 (104-251)||(745411-745560)
chr5 (104-251)||(7180895-7181044)
chr5 (104-251)||(9591861-9592010)
chr5 (104-251)||(19665014-19665163)
chr5 (104-251)||(31551966-31552120)
chr5 (104-251)||(9987159-9987308)
chr5 (104-251)||(20545994-20546142)
chr5 (104-251)||(30130759-30130908)
chr5 (104-249)||(27019936-27020083)
chr5 (104-251)||(13305267-13305416)
chr5 (104-251)||(39588510-39588660)
chr5 (104-251)||(824651-824800)
chr5 (285-385)||(34663502-34663602)
chr5 (288-385)||(745665-745762)
chr5 (285-385)||(11076836-11076936)
chr5 (104-251)||(15420440-15420593)
chr5 (101-167)||(34654184-34654250)
chr5 (283-385)||(37940048-37940150)
chr5 (288-385)||(20546255-20546352)
chr5 (283-371)||(42612315-42612403)
chr5 (288-371)||(824901-824984)
chr5 (291-385)||(19664804-19664898)
chr5 (288-385)||(9591652-9591749)
chr5 (288-385)||(12499260-12499357)
chr5 (283-371)||(39588314-39588402)
chr5 (288-385)||(9987380-9987480)
chr5 (104-248)||(11984705-11984851)
chr5 (288-384)||(13305529-13305626)
chr5 (192-251)||(11076979-11077039)
chr5 (283-385)||(11984519-11984619)
chr5 (288-385)||(34401556-34401654)
chr5 (317-371)||(34858003-34858057)
chr5 (302-371)||(5102928-5102997)
chr5 (294-385)||(27550644-27550736)
chr5 (294-371)||(31552226-31552305)
chr5 (315-371)||(37256343-37256399)
chr5 (302-371)||(8526234-8526303)
chr5 (307-371)||(11078383-11078447)
chr5 (315-371)||(15524171-15524227)
chr5 (315-371)||(15527232-15527288)
chr5 (311-371)||(29639383-29639443)
chr5 (137-251)||(744720-744840)
chr5 (138-251)||(27551562-27551681)
chr5 (317-381)||(6720842-6720907)
chr5 (287-371)||(37270299-37270384)
chr5 (288-320)||(15420313-15420345)
chr5 (215-251)||(37939616-37939652)
chr5 (216-251)||(7180786-7180821)
chr5 (216-251)||(27019248-27019283)
chr5 (312-371)||(29390934-29390993)
chr5 (325-371)||(6719535-6719581)
chr5 (285-385)||(7179705-7179803)
chr5 (215-251)||(20545325-20545361)
[»] chr1 (70 HSPs)
chr1 (104-251)||(29521726-29521875)
chr1 (104-251)||(33704659-33704808)
chr1 (104-251)||(36307901-36308050)
chr1 (104-242)||(12768308-12768448)
chr1 (101-251)||(33006258-33006410)
chr1 (104-251)||(14488623-14488772)
chr1 (104-251)||(24781123-24781272)
chr1 (104-251)||(25655909-25656058)
chr1 (104-251)||(48127833-48127982)
chr1 (104-251)||(7152983-7153132)
chr1 (104-251)||(35954476-35954625)
chr1 (104-249)||(36730727-36730874)
chr1 (107-251)||(10772792-10772938)
chr1 (104-251)||(31030149-31030298)
chr1 (101-251)||(30302819-30302971)
chr1 (104-249)||(44512221-44512368)
chr1 (282-382)||(33006450-33006550)
chr1 (104-251)||(52404660-52404806)
chr1 (285-385)||(30303013-30303113)
chr1 (287-385)||(7556141-7556239)
chr1 (133-248)||(29649522-29649639)
chr1 (104-247)||(46118300-46118444)
chr1 (285-385)||(52404517-52404617)
chr1 (283-385)||(44512452-44512554)
chr1 (104-251)||(5326777-5326927)
chr1 (288-385)||(10772588-10772685)
chr1 (288-385)||(31029939-31030036)
chr1 (285-385)||(46118153-46118253)
chr1 (283-371)||(48127637-48127725)
chr1 (288-371)||(33704464-33704547)
chr1 (290-385)||(51086620-51086715)
chr1 (288-385)||(21096687-21096784)
chr1 (288-383)||(7152764-7152859)
chr1 (287-387)||(29521981-29522082)
chr1 (192-251)||(30838599-30838659)
chr1 (291-385)||(25655711-25655806)
chr1 (288-371)||(30838776-30838859)
chr1 (285-347)||(5326673-5326734)
chr1 (288-385)||(36307699-36307797)
chr1 (284-385)||(35954271-35954371)
chr1 (282-347)||(12768194-12768256)
chr1 (288-367)||(14488858-14488937)
chr1 (307-385)||(5328799-5328877)
chr1 (288-385)||(24780915-24781012)
chr1 (315-371)||(4640334-4640390)
chr1 (285-361)||(34334243-34334319)
chr1 (104-164)||(52405848-52405907)
chr1 (104-164)||(52406180-52406239)
chr1 (315-381)||(43846254-43846320)
chr1 (302-371)||(44300165-44300235)
chr1 (311-385)||(52407329-52407403)
chr1 (293-342)||(29649687-29649736)
chr1 (307-371)||(4638209-4638273)
chr1 (315-371)||(23264093-23264149)
chr1 (315-371)||(43847692-43847748)
chr1 (315-371)||(44299125-44299181)
chr1 (302-385)||(33004509-33004591)
chr1 (294-348)||(36730522-36730577)
chr1 (192-246)||(51086838-51086893)
chr1 (138-251)||(25656626-25656745)
chr1 (302-385)||(29647586-29647670)
chr1 (216-251)||(7556891-7556926)
chr1 (311-370)||(23258891-23258950)
chr1 (302-371)||(12769565-12769633)
chr1 (218-251)||(30302120-30302153)
chr1 (314-371)||(42159421-42159478)
chr1 (218-251)||(48128597-48128630)
chr1 (315-371)||(11757105-11757161)
chr1 (302-342)||(30301086-30301126)
chr1 (302-385)||(35956246-35956327)
[»] scaffold0208 (4 HSPs)
scaffold0208 (101-251)||(5586-5738)
scaffold0208 (288-371)||(5810-5893)
scaffold0208 (302-385)||(3906-3987)
scaffold0208 (138-251)||(4943-5062)
[»] scaffold0060 (2 HSPs)
scaffold0060 (104-242)||(56387-56527)
scaffold0060 (282-347)||(56273-56335)
[»] chr2 (62 HSPs)
chr2 (104-242)||(39774922-39775060)
chr2 (104-251)||(2292120-2292269)
chr2 (104-251)||(37725321-37725470)
chr2 (104-238)||(3851545-3851681)
chr2 (104-251)||(4738058-4738207)
chr2 (104-251)||(15152638-15152787)
chr2 (104-251)||(27551416-27551565)
chr2 (104-242)||(42080618-42080758)
chr2 (104-251)||(3906711-3906860)
chr2 (104-251)||(15399048-15399197)
chr2 (104-251)||(25223539-25223688)
chr2 (104-242)||(3754702-3754842)
chr2 (104-239)||(6644737-6644874)
chr2 (104-239)||(77422-77559)
chr2 (104-216)||(38282080-38282193)
chr2 (285-371)||(6644597-6644683)
chr2 (288-385)||(38282332-38282429)
chr2 (104-184)||(39966978-39967058)
chr2 (288-385)||(77668-77765)
chr2 (282-347)||(3851737-3851802)
chr2 (288-385)||(28391872-28391969)
chr2 (142-249)||(14005921-14006030)
chr2 (283-385)||(3906969-3907071)
chr2 (282-385)||(39775112-39775217)
chr2 (282-385)||(42080810-42080915)
chr2 (287-371)||(15152431-15152515)
chr2 (287-368)||(15398870-15398951)
chr2 (104-251)||(28391621-28391770)
chr2 (288-367)||(1054778-1054857)
chr2 (283-342)||(3767810-3767869)
chr2 (288-385)||(37725989-37726086)
chr2 (302-381)||(20919887-20919966)
chr2 (283-385)||(14006114-14006216)
chr2 (287-371)||(2292410-2292495)
chr2 (302-371)||(27479081-27479150)
chr2 (315-380)||(39879927-39879992)
chr2 (315-371)||(6319345-6319401)
chr2 (315-371)||(33182802-33182858)
chr2 (302-381)||(518089-518168)
chr2 (302-371)||(24460736-24460805)
chr2 (315-371)||(18248617-18248673)
chr2 (299-371)||(25223369-25223441)
chr2 (315-371)||(39159904-39159960)
chr2 (315-371)||(39209234-39209290)
chr2 (287-371)||(4738324-4738416)
chr2 (138-251)||(15399779-15399898)
chr2 (302-383)||(27549725-27549804)
chr2 (314-371)||(18246498-18246555)
chr2 (317-381)||(20919142-20919207)
chr2 (314-371)||(21191804-21191861)
chr2 (315-371)||(14452111-14452167)
chr2 (302-385)||(15400866-15400947)
chr2 (315-371)||(33178767-33178823)
chr2 (137-251)||(76763-76881)
chr2 (216-251)||(3850925-3850960)
chr2 (285-371)||(6647205-6647291)
chr2 (138-184)||(27550812-27550858)
chr2 (216-249)||(15153438-15153471)
chr2 (316-381)||(24520432-24520497)
chr2 (315-371)||(6322374-6322430)
chr2 (314-381)||(21178503-21178571)
chr2 (327-371)||(36602977-36603021)
[»] chr6 (43 HSPs)
chr6 (104-251)||(14104048-14104197)
chr6 (104-251)||(17550697-17550846)
chr6 (104-251)||(955455-955604)
chr6 (104-251)||(4589691-4589840)
chr6 (104-251)||(11154489-11154638)
chr6 (104-251)||(11837457-11837606)
chr6 (104-251)||(16918453-16918602)
chr6 (104-251)||(28578665-28578814)
chr6 (104-242)||(21861135-21861275)
chr6 (104-251)||(27782525-27782674)
chr6 (104-251)||(24083180-24083329)
chr6 (285-385)||(24083037-24083137)
chr6 (104-251)||(25109598-25109746)
chr6 (288-371)||(14103845-14103928)
chr6 (104-251)||(23580335-23580483)
chr6 (288-385)||(11154751-11154848)
chr6 (288-385)||(11837715-11837812)
chr6 (131-251)||(27438455-27438577)
chr6 (288-385)||(4589939-4590036)
chr6 (288-385)||(23580125-23580222)
chr6 (291-385)||(27782306-27782400)
chr6 (287-371)||(955712-955796)
chr6 (282-371)||(21861327-21861413)
chr6 (288-385)||(17550945-17551042)
chr6 (285-385)||(16918285-16918385)
chr6 (302-385)||(15287502-15287585)
chr6 (288-385)||(25109392-25109491)
chr6 (288-371)||(28578478-28578560)
chr6 (302-368)||(12783039-12783105)
chr6 (302-371)||(5090307-5090376)
chr6 (302-371)||(13866072-13866141)
chr6 (315-371)||(32562644-32562700)
chr6 (216-251)||(27440762-27440797)
chr6 (138-251)||(15288236-15288355)
chr6 (138-251)||(24083887-24084006)
chr6 (215-251)||(23573922-23573958)
chr6 (315-371)||(24159047-24159103)
chr6 (216-251)||(954758-954793)
chr6 (216-251)||(25119555-25119590)
chr6 (216-251)||(27783325-27783360)
chr6 (192-244)||(32562528-32562581)
chr6 (315-371)||(5088641-5088697)
chr6 (289-385)||(27438252-27438346)
[»] scaffold0115 (3 HSPs)
scaffold0115 (101-251)||(20962-21113)
scaffold0115 (288-371)||(20777-20859)
scaffold0115 (137-251)||(22764-22884)
[»] scaffold0259 (2 HSPs)
scaffold0259 (104-251)||(5886-6035)
scaffold0259 (285-385)||(6078-6178)
[»] scaffold0003 (3 HSPs)
scaffold0003 (131-251)||(48785-48907)
scaffold0003 (216-251)||(46564-46599)
scaffold0003 (289-385)||(49016-49110)
[»] scaffold0009 (1 HSPs)
scaffold0009 (315-381)||(94640-94706)
[»] scaffold0014 (1 HSPs)
scaffold0014 (302-381)||(71773-71852)


Alignment Details
Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 277 - 426
Target Start/End: Complemental strand, 21729734 - 21729585
Alignment:
Q  277 gttgtctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatag 376  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  21729734 gttgcctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctatgtatattaaattttgattgatag 21729635  T
Q  377 atatcatgacatttaatgttgtctattattatacttaaatggtgatcata 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21729634 atatcatgacatttaatgttgtctattattatacttaaatggtgaccata 21729585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 21729914 - 21729769
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagat-gnnnnnnnttgatgtaaaattt 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||         ||||||||||||||    
T  21729914 ttttttttctcaagttcggggttttggaatggaagaaattttatgaatgtaattgatgaatttaaggacatccagataaaaaaaaattgatgtaaaattt 21729815  T
Q  206 tatttgttatagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21729814 tatttgttatagtcatgtagtgtagattaattaagattgaacacct 21729769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 17968086 - 17968234
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttgatgtaaaat 203  Q
    ||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||    
T  17968086 atgtttttgttctcacgttctgagttttagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaatttgatgtaaaat 17968185  T
Q  204 tttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  17968186 tttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 17968234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 20120240 - 20120091
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  20120240 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 20120141  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  20120140 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 20120091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 28589365 - 28589514
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||        |||||||||||    
T  28589365 atgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaatgaaagaaatttgatgtaaaa 28589464  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  28589465 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 28589514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 44459071 - 44459220
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  44459071 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 44459170  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  44459171 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 44459220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 725301 - 725450
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  725301 atgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcgagatgaaagaaatttgatgtaaaa 725400  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  725401 ttttatttattataagtcttgtagtgtaaattaattaagattgaacacct 725450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 9663369 - 9663518
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  9663369 atgtttttgttctaacgttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 9663468  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  9663469 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 9663518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 18994735 - 18994884
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||||||||        |||||||||||    
T  18994735 atgtttttgttctcacgttcggggttctggaatggaataaattttatgaatgtaaatgatgaagttaagaacatccagatgaaagaaatttgatgtaaaa 18994834  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  18994835 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 18994884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 41858317 - 41858466
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||    
T  41858317 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatacagatgaaagaaatttgatgtaaaa 41858416  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  41858417 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 41858466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 23594337 - 23594487
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg--nnnnnnnttgatgtaaa 201  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||         ||||||||||    
T  23594337 atgtttttgttctcacgttcggggttttagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccacatgaaaaaaaaattgatgtaaa 23594436  T
Q  202 attttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  23594437 attttatttgttataagtcttgtagtgtaaattacttaagattgaacacct 23594487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 47909157 - 47909304
Alignment:
Q  106 gtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaatt 204  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        ||| |||||||||    
T  47909157 gtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgttgtaaaatt 47909256  T
Q  205 ttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  47909257 ttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 47909304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 3415923 - 3416072
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||        |||||||||||    
T  3415923 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaaagtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 3416022  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  3416023 ttttattttttataagtcttgtagtgtaaattaattaagattgaacacct 3416072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 16277338 - 16277487
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||| || |||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  16277338 atgtttttgttcccacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 16277437  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  16277438 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 16277487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 46555263 - 46555412
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  46555263 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 46555362  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| || |||| |||| |||| |||||||||||||||||||||    
T  46555363 ttttatttgtcataagtcttgtaatgtaaattaattaagattgaacacct 46555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 48951946 - 48952095
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||        ||||| |||||    
T  48951946 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatacagatgaaagaaatttgatttaaaa 48952045  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  48952046 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 48952095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 30759861 - 30760013
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg----nnnnnnnttgatgta 199  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| || |||           ||||||||    
T  30759861 atgtttttgttctcacgttcggggttttagaatggaagaaattttatgaatgtaagtgatgaatttaaggacattcaaatgaaaaaaaaaaattgatgta 30759960  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  30759961 aaattttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 30760013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 48683475 - 48683328
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  48683475 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 48683376  T
Q  203 ttttatttgtta-tagtcatgtagtgtagattaattaagattgaacac 249  Q
    ||||||||||||  |||| ||||||||| |||||||||||||||||||    
T  48683375 ttttatttgttacaagtcttgtagtgtaaattaattaagattgaacac 48683328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 4925155 - 4925006
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  4925155 atgtttttgttctcacgttcggggttctggaattgaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaagaaatttgatgtaaaa 4925056  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| |||||| || |||||||||||||||||||||    
T  4925055 ttttatttgttataagtcttgtagtctaaattaattaagattgaacacct 4925006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 21815616 - 21815467
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||  |||||||||||        |||||||||||    
T  21815616 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaagaaatttgatgtaaaa 21815517  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  21815516 ttttattttttataagtcttgtagtgtaaattaattaagattgaacacct 21815467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 48607399 - 48607548
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  48607399 atgtttttgttctcacgttcggggttctggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 48607498  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||| || |||||| |||| ||| ||||| |||||||||||||||||||||    
T  48607499 tttgatgtgttataagtcttgtggtgtaaattaattaagattgaacacct 48607548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 46936052 - 46936202
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagat--gnnnnnnnttgatgtaaa 201  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||||||||          ||||||||||    
T  46936052 atgtttttgttctcactttcggggttcttgaatggaagaaattttataaatataagtgatgaatttaagaacatccagataaaaaaaaatttgatgtaaa 46936151  T
Q  202 attttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  46936152 attttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 46936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 33246407 - 33246556
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||| ||| |||||||||| | |||||||||||||||||||||| ||| ||||||||||||| |||||||||||        |||||||||||    
T  33246407 atgtttttgttttcacgttcggggttctagaatggaagaaattttatgaatataaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 33246506  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||||||    
T  33246507 ttttatttgttataagttttgtagtgtaaattaattaagattgaacacct 33246556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 40015455 - 40015604
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||  ||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||        |||||||||||    
T  40015455 atgtttttgttctcacgtttagggttctggaatggaagaaattttatgaatgtaaatgataaatttaaggacatccagatgaaagaaatttgatgtaaaa 40015554  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||| |||||    
T  40015555 ttttatttgttataagtcttgtagtgtaaattaattaagattgagcacct 40015604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 46000925 - 46000776
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||| |||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  46000925 atgttttttttctcacgtttggggttctggaattgaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 46000826  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
     |||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  46000825 ctttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 46000776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 41336517 - 41336367
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaa-ttttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaa 201  Q
    ||||||||||||||| ||| |||||| || ||||||| ||| |||||||||||||| |||| |||||||| |||||||||||       || ||||||||    
T  41336517 atgtttttgttctcacgtttggggttctgaaatggaaaaaaattttatgaatgtaaatgataaatttaaggacatccagatgaaagaaatttgatgtaaa 41336418  T
Q  202 attttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  41336417 attttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 41336367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 44882968 - 44882822
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||  |||||        |||||||||||    
T  44882968 atgtttttgttctcacgttcggggttctggaatggatgaaattttatgaatgtaaatgatgaatttaaggacatttagatgaaagaaatttgatgtaaaa 44882869  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaaca 248  Q
    ||||||||||||| || | ||||||||| ||||||||||||| ||||    
T  44882868 ttttatttgttataagacttgtagtgtaaattaattaagattcaaca 44882822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 46000666 - 46000569
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||    
T  46000666 attaagattaactcttttattttaagaaaaaatctattcatttatttgacatttaatattatctatgtatattacattttgattaattgatatcatga 46000569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 47503839 - 47503687
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgat---gaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||   ||||||||| |||||||||||        ||||||||    
T  47503839 atgtttttgttctcacgttcggggttttagaatggaagaaattttatgcaagtaagtgatgaagaatttaaggacatccagatgaaaaaaatttgatgta 47503740  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||| | ||||||| |||||||||||||||| ||||    
T  47503739 aaattttatttgttataagtcttttagtgtaaattaattaagattgaatacct 47503687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 40015712 - 40015809
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| ||||||||| || ||||||||||    
T  40015712 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttgattgattgatatcatga 40015809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 41336261 - 41336164
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| || ||||||||| ||||||||| || ||||||||||    
T  41336261 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattacctatgtatattacattttgattgattgatatcatga 41336164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 725560 - 725658
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattg-attcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||| |  | |||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||||    
T  725560 attaagattaactcttttatttttagaaaaaaatctactcatttatttgacatttaatgttatctatgtatattatattttgattggttgatatcatga 725658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 16277596 - 16277698
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||  || ||||||||| |||||||||  | |||||||    
T  16277596 taataattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttccctatgtatattacattttgattggttgatatca 16277695  T
Q  383 tga 385  Q
    |||    
T  16277696 tga 16277698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 33246672 - 33246774
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | ||||||| |||||||||| ||||| || ||||||||| |||||||||  | |||||||    
T  33246672 taataattaagattaactcttttatttttagaaaaaatctactcatttacttgacatttaatgttacctatgtatattacattttgattggttgatatca 33246771  T
Q  383 tga 385  Q
    |||    
T  33246772 tga 33246774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 3416173 - 3416269
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||| |||| | ||||||||||    
T  3416173 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacatttt-attagttgatatcatga 3416269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 18995005 - 18995102
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||| ||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  18995005 attaagattaactcttttatttttagaaaaaatctactcatttatttgaaatttaatgttacctatgtatattacattttgattggttgatatcatga 18995102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 371
Target Start/End: Complemental strand, 21815350 - 21815270
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  21815350 aagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 21815270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 371
Target Start/End: Original strand, 44459326 - 44459414
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||||||||||| ||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  44459326 taataattaagattaactcatttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 44459414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 44522702 - 44522770
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaag 172  Q
    ||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  44522702 atgtttttgttctcacgttcgggattttagagtggaagaaattttatgaatgtaagtgatgaatttaag 44522770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 4924893 - 4924810
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| || ||||||||| |||||||||    
T  4924893 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattacctatgtatattacattttgatt 4924810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 30760092 - 30760187
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattg-attcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||| |  | |||||||||||||||||| ||||| || ||||||||| |||||||||| | ||||||||||    
T  30760092 aagattaactcttttatttttagaaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattagttgatatcatga 30760187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 46555519 - 46555602
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  46555519 attaagattaactcttttatttttagaaataatctactcatttatttgacatttaatgttacctatgtatattatattttgatt 46555602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 20120016 - 20119919
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||||||||||  |||| || ||||||||| |||||||||  | ||||||||||    
T  20120016 attaaaattaactcttttatttttagaaaaaatctactcatttatttgacatttaaagttacctatgtatattacattttgattggttgatatcatga 20119919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 385
Target Start/End: Original strand, 9663625 - 9663724
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  9663625 gattaagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattggttgatatcatga 9663724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 371
Target Start/End: Complemental strand, 4859712 - 4859632
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||| ||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||    
T  4859712 aagatcaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttgatt 4859632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 44882714 - 44882630
Alignment:
Q  288 attaagattaactcttttatttttagaa-aaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||| |||||  | |||||||||||||||||| | ||| || ||||||||| |||||||||    
T  44882714 attaagattaactcttttatttttagaaaaaaatctactcatttatttgacatttaatattacctatgtatattacattttgatt 44882630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 372
Target Start/End: Original strand, 48952204 - 48952288
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatta 372  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||||||| || ||||| || | ||||||| ||||| ||||    
T  48952204 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatctaatgttacctatatatattacattttaatta 48952288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 28589645 - 28589727
Alignment:
Q  303 tttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||| | || |||||||    
T  28589645 tttatttttagaaaaaatctactcatttatttgacatttaatgttacctctgtatattacattttgattagttgacatcatga 28589727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 371
Target Start/End: Original strand, 17968338 - 17968419
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattg-attcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||| |||||||||||||||||| |  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  17968338 aagattaactattttatttttagaaaaaaatctactcatttatttgacatttaatgttacctgtgtatattacattttgatt 17968419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 41858581 - 41858678
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||| |||||||  | ||||||||||||||| || | ||| || | ||||||| ||||| |||| | ||||||||||    
T  41858581 attaagattaactcttttatttttaaaaaaaatctactcatttatttgacatctaatattacctatatatattacattttaattagttgatatcatga 41858678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 380
Target Start/End: Complemental strand, 43542633 - 43542568
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatat 380  Q
    ||||||||| | |||||||||||||||| |||||| ||||||||||| |||||||||||| |||||    
T  43542633 aaaaattgactaatttatttgacatttaatgttatatttgtatattacattttgattaattgatat 43542568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 586118 - 586178
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  586118 tagaaaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 586178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 47909383 - 47909470
Alignment:
Q  295 ttaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||   | |||||||||||||||||  ||||| || ||||||||| |||||||||  | ||||||||||    
T  47909383 ttaactcttttatttttagaaaaaa---actcatttatttgacattttatgttacctatgtatattacattttgattggttgatatcatga 47909470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 367
Target Start/End: Complemental strand, 48683208 - 48683128
Alignment:
Q  288 attaagattaactcttttatttttagaa-aaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    |||||||||||||||||||||||||||| |||||  | |||||||||||||||||| |||||  | ||||||||| |||||    
T  48683208 attaagattaactcttttatttttagaaaaaaatctactcatttatttgacatttaatgttacatatgtatattacatttt 48683128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 8393344 - 8393433
Alignment:
Q  285 atgattaagattaactcttttatttttagaaa-------aaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    |||||||||| |||||||||||||||||||||       |||| || |||||||||||||||||| |||||||| ||||||||| |||||    
T  8393344 atgattaagactaactcttttatttttagaaagaaaaaaaaatcgactcatttatttgacatttaatgttatctatgtatattacatttt 8393433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 385
Target Start/End: Original strand, 10934704 - 10934803
Alignment:
Q  287 gattaagattaactcttttattttta-gaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||| ||| |||||||| |||| | |||||||||||||||||||||||||||||| || |  || || |||||| ||||||||| || ||||||||||    
T  10934704 gattaacattgactctttttttttaaagaaaaaattgattcatttatttgacatttaatgatgcctatgcatattatattttgattgattgatatcatga 10934803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 385
Target Start/End: Original strand, 48607651 - 48607750
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||| |||||||||||||||  | |||||||||||||||||| | |||  | ||||||||  |||||||||  | ||||||||||    
T  48607651 gattaagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatattacttatgtatattgcattttgattggttgatatcatga 48607750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 1602355 - 1602425
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||||||| | |||||||||||||||| |||||  ||||||||||| ||||||||| || ||||||    
T  1602355 tagaaaaaattgactaatttatttgacatttaatgttacatttgtatattacattttgattgattgatatc 1602425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 41289464 - 41289521
Alignment:
Q  195 atgtaaaattttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||    
T  41289464 atgtaaaattttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 41289521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 41289597 - 41289694
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||| | |||||||  | | |||||||||||||||| ||||  || ||||||||| ||||| ||| || |||| |||||    
T  41289597 attaagattaactcttttattttaaaaaaaaatctactaatttatttgacatttaatgttgcctatgtatattacatttttattgattgataacatga 41289694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 37708325 - 37708381
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  37708325 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 37708381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 38229729 - 38229785
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  38229729 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 38229785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 41406054 - 41405998
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  41406054 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 41405998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 47254711 - 47254767
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  47254711 aaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgatt 47254767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 8391563 - 8391485
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| |||||||||||| |||||||||||||||||| |||| ||  ||||| ||| |||||||||  | ||||||||||    
T  8391563 ttttaagaaaaaattgactcatttatttgacatttaatgttgtcaatgtatgttacattttgattgtttgatatcatga 8391485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 44521294 - 44521175
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||| | ||     ||||||||||||| |    
T  44521294 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgctctaagccagtcatgtagtgtaaa 44521195  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  44521194 ttaattaagattgaacacct 44521175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 46935485 - 46935366
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    |||||||||||||||||||||  ||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  46935485 gaagaaattttatgaatgtaacagataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagacagtcatgtagtgtaaa 46935386  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  46935385 ttaattaagattgaacacct 46935366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 8393266 - 8393323
Alignment:
Q  120 gttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacat 177  Q
    |||| ||||| | ||||||||||||||||||||||||| ||||||| |||||| ||||    
T  8393266 gttctgggttctagaatggaagaaattttatgaatgtatgtgatgactttaaggacat 8393323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 19064022 - 19063965
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||||  |||||||||    
T  19064022 aaaaaattgagtcatttatttgacatttaatgttacatttgtatattgcattttgatt 19063965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 41289355 - 41289237
Alignment:
Q  139 aagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtagat 232  Q
    |||||||||||||||||||| |||| || ||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| ||    
T  41289355 aagaaattttatgaatgtaactgataaacttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaat 41289256  T
Q  233 taattaagattgaacacct 251  Q
    |||||||||||||||||||    
T  41289255 taattaagattgaacacct 41289237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 33979478 - 33979422
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| | |||||||||||||||| |||||  ||||||||||| |||||||||    
T  33979478 aaaaattgacttatttatttgacatttaatgttacatttgtatattacattttgatt 33979422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 33982555 - 33982611
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||| | |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  33982555 aaaaattaactcatttatttgacatttaatgttacatttgtatattatattttgatt 33982611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 38224453 - 38224397
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||| | |||||||||    
T  38224453 aaaaattgactcatttatttgacatttaatgttacatttgtatatcacattttgatt 38224397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 43545125 - 43545185
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||| |||||||||||| |||||  |||| | |||| |||||||||    
T  43545125 tagaaaaaattgattcattcatttgacatttaatgttacatttggagattacattttgatt 43545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 724648 - 724613
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  724648 agtcatgtagtgtaaattaattaagattgaacacct 724613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 4658216 - 4658181
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  4658216 agtcatgtagtgtaaattaattaagattgaacacct 4658181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 23592660 - 23592584
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||| || ||||  ||||||||| |||| ||  ||||||||| ||||||||| || ||||||||||    
T  23592660 tttttagaaaaaattgactcgttta--tgacatttaatgttgtcaatgtatattacattttgattgattgatatcatga 23592584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 28588729 - 28588694
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  28588729 agtcatgtagtgtaaattaattaagattgaacacct 28588694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 5374514 - 5374600
Alignment:
Q  287 gattaagattaactc-ttttatttttag-aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||| |||||||||||| |||||||  | |||||||||| ||||||| ||| |  | ||||||||| |||||||||    
T  5374514 gattaagattaactctttttatttttagaaaaaaatctactcatttatttaacatttaatgtaacttatgtatattacattttgatt 5374600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 30759285 - 30759239
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||    
T  30759285 gaagaaattttatgaatgtaactgataaatttaaggacattcagatg 30759239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 8392581 - 8392548
Alignment:
Q  218 tcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| |||||||||||||||||||||    
T  8392581 tcatgtagtgtaaattaattaagattgaacacct 8392548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 46934357 - 46934312
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgtt 347  Q
    |||| ||||||||||||||||| |||||||||||| ||||| ||||    
T  46934357 ttttttttttagaaaaaattgactcatttatttgatatttaatgtt 46934312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 584815 - 584759
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| ||| |||||||||||||| | |||  ||||||||||| |||||||||    
T  584815 aaaaattgactcagttatttgacatttaatattacatttgtatattatattttgatt 584759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 596339 - 596395
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||| ||||| |||||  ||| ||||||| |||||||||    
T  596339 aaaaattgactcatttatttgatatttaatgttacatttatatattacattttgatt 596395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 5374275 - 5374315
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaa 144  Q
    |||||||||||||||  ||||||||| ||||||||||||||    
T  5374275 atgtttttgttctcacattcggggttctggaatggaagaaa 5374315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 371
Target Start/End: Original strand, 41408132 - 41408184
Alignment:
Q  319 attgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||| |||||||||||||||||| | |||  ||||||||||| |||||||||    
T  41408132 attgactcatttatttgacatttaatattacatttgtatattacattttgatt 41408184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 47252086 - 47252026
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||| ||||||||||||||| || | |||  ||||||||| | |||||||||    
T  47252086 tagaaaaaattgactcatttatttgacatataatattacatttgtatatcacattttgatt 47252026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 385
Target Start/End: Original strand, 47505629 - 47505702
Alignment:
Q  310 ttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  47505629 ttagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattggttgatatcatga 47505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 92)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 28085712 - 28085864
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        ||||||||    
T  28085712 gatatgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgta 28085811  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  28085812 aaattttatttgttataagtcatatagtgtaaattaattaagattgaacacct 28085864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 30106001 - 30105849
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccaga-tgnnnnnnnttgatgta 199  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |        ||||||||    
T  30106001 gatatgtttttgttctcacgttcggggttttggaatgaaagaaattttatgaatgtaagtgatgaatttaaggacattcagattaaagaaatttgatgta 30105902  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  30105901 aaattttatttgttataagtcatgtagtgtaaattaattaagattgaacacct 30105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 30556504 - 30556648
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttgatgtaaaat 203  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||    
T  30556504 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaatttgatgtaaaat 30556603  T
Q  204 tttatttgttat-agtcatgtagtgtagattaattaagattgaac 247  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  30556604 tttatttgttataagtcttgtagtgtaaattaattaagattgaac 30556648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 3850285 - 3850136
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  3850285 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 3850186  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  3850185 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 3850136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 4622558 - 4622707
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||    
T  4622558 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaagaacatccagatgaaagaaatttgatgtaaaa 4622657  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  4622658 ttttatttgttatcagtcttgtagtgtaaattaattaagattgaacacct 4622707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 3704945 - 3705094
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  3704945 atgtttttgttctcacgttcggggttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 3705044  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  3705045 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 3705094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 13141120 - 13141269
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  13141120 atgtttttgttctcacgttcggggttctggaatagaagaaattttatgaatgtaagtgatgaatttaagtacatccagatgaaagaaatttgatgtaaaa 13141219  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  13141220 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 13141269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 42645574 - 42645425
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||        ||| |||||||    
T  42645574 atgtttttgttctcaagttcggggttttagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaagaaaatttgctgtaaaa 42645475  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||  ||||||| | |||||||||||||||||||||    
T  42645474 ttttatttgttataagtattgtagtgcaaattaattaagattgaacacct 42645425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 42735852 - 42735703
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||        |||||||||||    
T  42735852 atgtttttgttctcacgttcggggttctggaatggaagaaattttataaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 42735753  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||| |||||| |||| ||| |||||||||||||||||||||||||||    
T  42735752 ttttatctgttataagtcttgtggtgtagattaattaagattgaacacct 42735703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 16096169 - 16096018
Alignment:
Q  102 atatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaa 200  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||        |||||||||    
T  16096169 atatgtttttgttctcacgttcggggttctggaatggaagaaattttataaatgtaaatgatgaatttaagcacatccagatgaaagaaatttgatgtaa 16096070  T
Q  201 aattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| || |||| ||||||||| |||||||||||||||||||||    
T  16096069 aattttatttgtcataagtcttgtagtgtaaattaattaagattgaacacct 16096018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 17948308 - 17948455
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||        |||||||||||    
T  17948308 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgacgaatttaaggacatccagatgaaagaaatttgatgtaaaa 17948407  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacac 249  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  17948408 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacac 17948455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 276990 - 276841
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  276990 atgtttttgttctcacgttcggggttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 276891  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  276890 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 276841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 638859 - 639008
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  638859 atgtttttgttctcacgttcggggttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 638958  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  638959 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 639008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 824665 - 824814
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  824665 atgtttttgttctcacgttcggggttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 824764  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  824765 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 824814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 15883236 - 15883385
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||| ||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  15883236 atgtttttgttctcacgttcggggttctagaatggaagaaattctatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 15883335  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  15883336 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 15883385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 23346978 - 23347127
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||| || |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  23346978 atgtttttgttctcacgttcgggattctggaatggaagaaactttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 23347077  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  23347078 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 23347127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 25583416 - 25583565
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||        || ||||||||    
T  25583416 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaagaaattttatgtaaaa 25583515  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  25583516 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 25583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 43694982 - 43695131
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  43694982 atgtttttgttctcacgttcggggttctataatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaaatttgatgtaaaa 43695081  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  43695082 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 43695131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 2082089 - 2082238
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||| |||||||  |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  2082089 atgtttatgttctcgcgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 2082188  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||||||    
T  2082189 ttttatttgttataagttttgtagtgtaaattaattaagattgaacacct 2082238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 45409028 - 45409178
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttgatgtaa 200  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||  | ||||||| |||       |||||||||    
T  45409028 gatatgtttttgttctcacgttcggggttttagaatggaagaaattttatgaatgtaagtgatg-atttttggacatccaaatgaaaaaagttgatgtaa 45409126  T
Q  201 aattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||| ||||| |||| ||||||||| ||||||||||||||| |||||    
T  45409127 aattttattagttataagtcttgtagtgtaaattaattaagattgatcacct 45409178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 6093582 - 6093433
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagat-gnnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||         |||||||||||    
T  6093582 atgtttttgttctcacgttctgggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaataaaagaaatttgatgtaaaa 6093483  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  6093482 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 6093433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 39858268 - 39858119
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  39858268 atgtttttgttctcacgttcggggttctgaaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 39858169  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||| ||| |||  ||| ||||| |||| ||||||||||||||||    
T  39858168 ttttatttgctataagttttgtggtgtaaattagttaagattgaacacct 39858119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 41545230 - 41545081
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||  ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  41545230 atgtttttgttctcacgttcgtagttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 41545131  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| | || | ||||||| |||||||||||||||||||||    
T  41545130 ttttatttgttataaatcttatagtgtaaattaattaagattgaacacct 41545081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 28085895 - 28085998
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||| |||  |||||||     
T  28085895 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttaatgttgtctatgtatattatattttaattggtagatata 28085994  T
Q  382 atga 385  Q
    ||||    
T  28085995 atga 28085998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 30105807 - 30105706
Alignment:
Q  284 aatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcat 383  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||| ||||||||| |||||||||  ||||||||||    
T  30105807 aatgattaagattaactcttttatttttaaaaaaaattgattcatttatttgacatttaatattgtctatgtatattatattttgattggtagatatcat 30105708  T
Q  384 ga 385  Q
    ||    
T  30105707 ga 30105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 18955502 - 18955353
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||||||  ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||| |||| ||||||        |||||||||||    
T  18955502 atgtttttgttctcactttcggggttctggaatagaagaaattttatgaatgtaaatgatgaattcaaggacattcagatgaaagaaatttgatgtaaaa 18955403  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||| ||||    
T  18955402 ttttatttgttataagtcttgtagtgtaaattaattaagattgaaaacct 18955353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 27912652 - 27912503
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| | ||| |||||        |||||||||||    
T  27912652 atgtttttattctcacgttcggggttcttgaatggaagaaattttatgaatgtaaatgatgaatttaaggatatctagatgaaataaatttgatgtaaaa 27912553  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| || |||| ||||||||| |||||||||||||||||||||    
T  27912552 ttttatttgtcataagtcttgtagtgtaaattaattaagattgaacacct 27912503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 27959071 - 27958922
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| | ||| |||||        |||||||||||    
T  27959071 atgtttttattctcacgttcggggttcttgaatggaagaaattttatgaatgtaaatgatgaatttaaggatatctagatgaaataaatttgatgtaaaa 27958972  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| || |||| ||||||||| |||||||||||||||||||||    
T  27958971 ttttatttgtcataagtcttgtagtgtaaattaattaagattgaacacct 27958922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 44256348 - 44256202
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattt 205  Q
    ||||| |||||| ||| |||||| | ||| |||||||||||||||||||||| ||||||||||||| ||||| |||||       || ||||||||||||    
T  44256348 tttttattctcacgtttggggttctagaaaggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaaaaaatttgatgtaaaattt 44256249  T
Q  206 tatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  44256248 tatttgttataagtcttgtagtgtaaattaattaagattgaacacct 44256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 18089436 - 18089538
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| ||||| |||  | |||||||    
T  18089436 taatgattaatattaactcttttatttttagaaaaaattgactcatttatttgacatttaatgttgtctatgtatattatattttaattggttgatatca 18089535  T
Q  383 tga 385  Q
    |||    
T  18089536 tga 18089538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 17853351 - 17853448
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||||    
T  17853351 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttatctatgtatattacattttgattggttgatatcatga 17853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 385
Target Start/End: Complemental strand, 39858002 - 39857904
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||| ||||||||||||||||||||||||  | |||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||||    
T  39858002 gattaagataaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttatctatgtatattatattttgattggttgatatcatga 39857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 2082349 - 2082446
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || |||| |||| ||||||||| || ||||||||||    
T  2082349 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtacattacattttgattgattgatatcatga 2082446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 15883492 - 15883589
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| ||  |||||||| ||||||||| || ||||||||||    
T  15883492 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctaggtatattacattttgattgattgatatcatga 15883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 40304190 - 40304300
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  40304190 atgtttttgttctcacgttcagggttctagaatgaaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 40304289  T
Q  203 ttttatttgtt 213  Q
    |||||||||||    
T  40304290 ttttatttgtt 40304300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 23347211 - 23347311
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||| ||| || | |||||||    
T  23347211 atgattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttaattgattgttatcatg 23347310  T
Q  385 a 385  Q
    |    
T  23347311 a 23347311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 4622819 - 4622902
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  4622819 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 4622902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 6093319 - 6093228
Alignment:
Q  294 attaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||||||| || ||||||||||    
T  6093319 attaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattgattgatatcatga 6093228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 290 - 385
Target Start/End: Original strand, 13141375 - 13141470
Alignment:
Q  290 taagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  13141375 taagattaactcttttatttttagaaaaaatctattcatttattggacatttaatgttacctatgtatattatattttgattggttgatatcatga 13141470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 43695245 - 43695340
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcat 383  Q
    ||||| ||||||| |||||||||||||||||||  |||||||||||||||||||| ||||| || ||||||||| |||||||||| | ||||||||    
T  43695245 attaatattaactattttatttttagaaaaaatcaattcatttatttgacatttaatgttacctatgtatattacattttgattagttgatatcat 43695340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 276721 - 276624
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||  | ||||||||||    
T  276721 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttgattggttgatatcatga 276624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 639128 - 639225
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||  | ||||||||||    
T  639128 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttgattggttgatatcatga 639225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 824934 - 825031
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||  | ||||||||||    
T  824934 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttgattggttgatatcatga 825031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 16095910 - 16095813
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  16095910 attaagattaactcttttatttttagaaataatctactcatttatttgacatttaatgttacctatgtatattatattttgattggttgatatcatga 16095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 18955237 - 18955140
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || |||||| || |||||||||  | ||||||||||    
T  18955237 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatagtacattttgattggttgatatcatga 18955140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 3846643 - 3846559
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||    
T  3846643 gattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatctatattacattttgatt 3846559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 3705200 - 3705297
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||| ||||||| ||||| || ||||||||| ||||| |||  | ||||||||||    
T  3705200 attaagattaactcttttatttttagaaaaaatatactcatttatttaacatttaatgttacctatgtatattacattttaattggttgatatcatga 3705297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 27912025 - 27911928
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||| ||||||||  | |||||| ||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  27912025 attaagattaactcttttatttttcgaaaaaatctactcatttgtttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 27911928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 27958444 - 27958347
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||| ||||||||  | |||||| ||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  27958444 attaagattaactcttttatttttcgaaaaaatctactcatttgtttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 27958347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 385
Target Start/End: Original strand, 40304476 - 40304574
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  40304476 gattaagataaactcttttatttttagaaaaaatctactcatttatttgatatttaatgttacatatgtatattacattttgattggttgatatcatga 40304574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 17948573 - 17948670
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||| |||| |||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||| |||  | ||||||||||    
T  17948573 attaagattaactctttttttttaagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttaattggttgatatcatga 17948670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 44256097 - 44256000
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||| ||||||||| ||||| || | ||||||| ||||| |||  | ||||||||||    
T  44256097 attaagattaactcttttatttttagaaaaaatatactcatttatatgacatttaatgttacctatatatattacattttaattggttgatatcatga 44256000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 25583679 - 25583778
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaa--ttgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||| |||||||||||||||||||||||  |  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  25583679 attaagatgaactcttttatttttagaaaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 25583778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 30556757 - 30556852
Alignment:
Q  291 aagattaactcttttatttttag-aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||| ||||| ||||| |  ||||||||| ||||||||| || ||||||||||    
T  30556757 aagattaactcttttatttttagaaaaaaatctactcatttatttgatatttaatgttacccatgtatattacattttgattgattgatatcatga 30556852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 369
Target Start/End: Original strand, 38577121 - 38577202
Alignment:
Q  288 attaagattaactcttttatttttag-aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttga 369  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||| | ||| || ||||||||| |||||||    
T  38577121 attaagattaactcttttatttttagaaaaaaatctattcatttatttgacatttaatatta-ctatgtatattacattttga 38577202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 251
Target Start/End: Original strand, 38576901 - 38577010
Alignment:
Q  143 aattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-agtcatgtagtgtagattaattaag 240  Q
    |||||||||||||||||||||||||||||| ||||| |||||        ||||||||||| |||||||||||| |||| | ||||||| |||||||| |    
T  38576901 aattttatgaatgtaagtgatgaatttaaggacatcgagatgaaagaaatttgatgtaaaa-tttatttgttataagtcttctagtgtaaattaattatg 38576999  T
Q  241 attgaacacct 251  Q
    |||||||||||    
T  38577000 attgaacacct 38577010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 39068958 - 39068889
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| |||||||||||||||||| | |||| ||||||||||| |||||||||    
T  39068958 ttttttttatagaaaaaattgactcatttatttgacatttaatattatatttgtatattacattttgatt 39068889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 45408469 - 45408350
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  45408469 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctatgccagtcatgtagtgtaaa 45408370  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  45408369 ttaattaagattgaacacct 45408350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 23625767 - 23625710
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||| |||||||||||    
T  23625767 aaaaaattgactcatttatttgacatttaatgttacatttgtatatgaaattttgatt 23625710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 18089335 - 18089395
Alignment:
Q  192 ttgatgtaaaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| |||||| |||||    
T  18089335 ttgatgtaaaattttatttgttataagtcttgtagtgtaaattaattatgattgagcacct 18089395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 19143158 - 19143214
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  19143158 aaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgatt 19143214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 29725604 - 29725548
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  29725604 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 29725548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 31642982 - 31643038
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  31642982 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 31643038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 39859889 - 39859970
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||||||  ||||||||| |||||||||  | ||||||||||    
T  39859889 ttttttttttagaaaaaattgactcattta--tgacatttaatgttatcaatgtatattacattttgattggttgatatcatga 39859970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 42734785 - 42734701
Alignment:
Q  288 attaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||| |||||||||||||||  | |||||||||||||||||| | |||  | | ||||||| |||||||||    
T  42734785 attaagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatattacttatatatattacattttgatt 42734701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 38060861 - 38060924
Alignment:
Q  308 ttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  38060861 ttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 38060924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 40618435 - 40618518
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||| ||  ||||||||| || ||||||  | ||||||||||    
T  40618435 ttttttttatagaaaaaattgactcatttatttgacatttaatgttgtcaatgtatattacatgttgattggttgatatcatga 40618518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 5587096 - 5586969
Alignment:
Q  126 ggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnn-ttgatgtaaaattttatttgttata-gtcatgt 223  Q
    |||| |||||| |||||||||||||||||||||  |||| ||||||| ||||| | |||        ||||||| |||||||| |||||||| | | | |    
T  5587096 ggttatggaattgaagaaattttatgaatgtaaccgatggatttaaggacatctaaatgaaagaaaattgatgtgaaattttaattgttataagccctat 5586997  T
Q  224 agtgtagattaattaagattgaacacct 251  Q
    |||||| |||||||||||||||||||||    
T  5586996 agtgtaaattaattaagattgaacacct 5586969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 18089273 - 18089323
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaat 154  Q
    ||||||||||||||| ||| || |||||||||| |||||||||||||||||    
T  18089273 atgtttttgttctcatgtttggagttttggaatagaagaaattttatgaat 18089323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 38362530 - 38362464
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| |||||  ||| ||||||| ||||||||| || ||||||    
T  38362530 aaaaattgactcatttatttgacatttaatgttacatttatatattatattttgattgattgatatc 38362464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 41544980 - 41544882
Alignment:
Q  288 attaagattaactcttttatttttagaa-aaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||| |||||  | |||||||||| | ||||| |||||  | | ||||||| |||||||||  | ||||||||||    
T  41544980 attaagattaactcttttatttttagaaaaaaatctactcatttatttaatatttaatgttacttatatatattacattttgattggttgatatcatga 41544882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 42646152 - 42646271
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-----agtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||        ||||||| |||||||| ||||| |     |||||||||||||| |    
T  42646152 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagtcagtcatgtagtgtaaa 42646251  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||| ||||||||||||    
T  42646252 ttaattaggattgaacacct 42646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 43694404 - 43694285
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  43694404 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagtcagtcatgtagtgtaaa 43694305  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  43694304 ttaattaagattgaacacct 43694285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 45409223 - 45409316
Alignment:
Q  293 gattaactcttttatttttagaaa-aaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||| || ||||  | |||||||||||||||||  |||||  | ||||||||| |||||||||  | ||||||||||    
T  45409223 gattaactcttttatttttagcaagaaatctactcatttatttgacatttcatgttacttatgtatattacattttgattggttgatatcatga 45409316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 23346352 - 23346288
Alignment:
Q  192 ttgatgtaaaattttatttgttata-----gtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||| |||||||| ||||||||     ||||||||||||| |||||||||||||||||||||    
T  23346352 ttgatgtgaaattttaattgttataagccagtcatgtagtgtaaattaattaagattgaacacct 23346288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 26951247 - 26951303
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| | |||||||||||||||| |||||  ||||||||||| |||||||||    
T  26951247 aaaaattgactgatttatttgacatttaatgttacatttgtatattacattttgatt 26951303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 38364709 - 38364761
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||    
T  38364709 aaaaattgactcatttatttgacatttaatgttacatttgtatattacatttt 38364761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 41671438 - 41671494
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| || ||||||    
T  41671438 aaaaattgactcatttatttgacatttaatgttacatttgtatattacatgttgatt 41671494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 3703291 - 3703215
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||| |||||||  ||||||||| ||||  |  ||||||||| ||||||||| || ||||||||||    
T  3703291 tttttagaaaaaattgactcattta--tgacatttaatgttgccaatgtatattacattttgattgattgatatcatga 3703215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 16096581 - 16096616
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  16096581 agtcatgtagtgtaaattaattaagattgaacacct 16096616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 26965487 - 26965411
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  26965487 tttttagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattggttgatatcatga 26965411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 27913305 - 27913340
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  27913305 agtcatgtagtgtaaattaattaagattgaacacct 27913340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 27959724 - 27959759
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  27959724 agtcatgtagtgtaaattaattaagattgaacacct 27959759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 30555926 - 30555810
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  30555926 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaa 30555827  T
Q  232 ttaattaagattgaaca 248  Q
    |||||||||||||||||    
T  30555826 ttaattaagattgaaca 30555810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 371
Target Start/End: Complemental strand, 15825173 - 15825127
Alignment:
Q  325 tcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  15825173 tcatttatttgacatttaatgttacatttgtatattacattttgatt 15825127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 15825858 - 15825928
Alignment:
Q  302 ttttatttttagaaaaa-attgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||| ||||| |||||  ||||||||||||||||| |||||  ||||||||||| |||||||||    
T  15825858 ttttttttttataaaaagattgacacatttatttgacatttaatgttacatttgtatattacattttgatt 15825928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 38098008 - 38097939
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||  | |||||||||||||||||| | |||  | |||||| || |||||||||    
T  38098008 ttttatttttagaaaaaatctactcatttatttgacatttaatattacttatgtatactacattttgatt 38097939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 5586877 - 5586805
Alignment:
Q  300 tcttttatttttagaa-aaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||| ||||||||| |||||||| |||||||||| ||||||| | |||| |  |||||||| |||||||||    
T  5586877 tcttttttttttagaaaaaaattgactcatttatttaacatttaatattatatacgtatattacattttgatt 5586805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 30111645 - 30111681
Alignment:
Q  215 tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| || |||||||||||||||||||||    
T  30111645 tagtcatgtagtctaaattaattaagattgaacacct 30111681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 30554830 - 30554749
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||| ||||||||||||| |||||||  ||||||||| | || ||  ||||||||| ||||||||| || ||||||||||    
T  30554830 ttttttttatagaaaaaattgactcattta--tgacatttaatattgtcaatgtatattacattttgattgattgatatcatga 30554749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 35019351 - 35019295
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||| | |||||||||||||||||| |||||  |||||||| || |||||||||    
T  35019351 aaaaatttactcatttatttgacatttaatgttacatttgtatagtacattttgatt 35019295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 40303525 - 40303489
Alignment:
Q  215 tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  40303525 tagtcatgtagtgtaaattaattaagactgaacacct 40303489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 6e-47; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 34073250 - 34073102
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttgatgtaaaat 203  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||    
T  34073250 atgtttttgttctcacgttcggggttttagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaattttgatgtaaaat 34073151  T
Q  204 tttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  34073150 tttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 34073102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 16664878 - 16664729
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  16664878 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 16664779  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  16664778 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 16664729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 13534393 - 13534542
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  13534393 atgtttttgttctaacgttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 13534492  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  13534493 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 13534542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 3035643 - 3035792
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  3035643 atgtttttgttctcacgttcggggttctgaaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 3035742  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  3035743 ttttatttgttataagtcttttagtgtaaattaattaagattgaacacct 3035792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 4653190 - 4653041
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||| ||||||    
T  4653190 atgtttttgttctcacgttcggggttctgaaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgacgtaaaa 4653091  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  4653090 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 4653041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 17361359 - 17361210
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||    
T  17361359 atgtttttgttctcacgtttggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaagaaatttgatgtaaaa 17361260  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  17361259 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 17361210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 20786864 - 20787013
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||| |||||        |||||||||||    
T  20786864 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaataatgaatttaaggacatctagatgaaagaaatttgatgtaaaa 20786963  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  20786964 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 20787013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 46717927 - 46717778
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||||||        |||||||||||    
T  46717927 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaatgacatccagatgaaagaaatttgatgtaaaa 46717828  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  46717827 ttttatttattataagtcttgtagtgtaaattaattaagattgaacacct 46717778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 52447607 - 52447458
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||| |||        |||||||||||    
T  52447607 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccatatgaaataaatttgatgtaaaa 52447508  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  52447507 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 52447458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 54919616 - 54919467
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  54919616 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcaagatgaaagaaatttgatgtaaaa 54919517  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||| |||||| |||| ||||||||| |||||||||||||||||||||    
T  54919516 ttttatctgttataagtcttgtagtgtaaattaattaagattgaacacct 54919467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 104 - 248
Target Start/End: Original strand, 20353904 - 20354050
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||        ||| ||| |||    
T  20353904 atgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaagaaatttgttgttaaa 20354003  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaaca 248  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  20354004 ttttatttgttataagtcttgtagtgtaaattaattaagattgaaca 20354050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 8939634 - 8939485
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  8939634 atgtttttgttcttacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 8939535  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||  | ||||||| |||||||||||||||||||||    
T  8939534 ttttatttgttataagtattatagtgtaaattaattaagattgaacacct 8939485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 23419134 - 23419283
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  23419134 atgtttttgttctcacgttgggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcgagatgaaagaaatttgatgtaaaa 23419233  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  23419234 ttttatttattataagtcttgtagtgtaaattaattaagattgaacacct 23419283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 35824755 - 35824606
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||  ||||        |||||||||||    
T  35824755 atgtttttgttctcacgttcgggattctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatctggatgaaagaaatttgatgtaaaa 35824656  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  35824655 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 35824606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 49873950 - 49873804
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattt 205  Q
    ||||||||||||  |||||| || ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||        ||||||||||||||    
T  49873950 tttttgttctcacattcgggtttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaattt 49873851  T
Q  206 tatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||    
T  49873850 tatttgttataagtcttgtagtgtaaattaattaagattgaacacct 49873804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 23933384 - 23933533
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||| |||        |||||||||||    
T  23933384 atgtttttgttctcatgttcggggttctggaatggaaggaattttataaatgtaagtgatgaatttaaggacatccaaatgaaagaaatttgatgtaaaa 23933483  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| || || |||||||||||||||||||||    
T  23933484 ttttatttgttataagtcttgtggtataaattaattaagattgaacacct 23933533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 8939372 - 8939275
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||| |||||||||| | ||||||||||    
T  8939372 attaagattaactcttttatttttagaaaaaatttattcatttatttgacatttaatgttacctatgtatattacattttgattagttgatatcatga 8939275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 251
Target Start/End: Original strand, 31292434 - 31292580
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattt 205  Q
    ||||| |||||| |||||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||        ||||||||||| ||    
T  31292434 ttttttttctcacgttcggggttttggaatgaaagaaatttaatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaaatt 31292533  T
Q  206 tatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| |||| ||||||||| |||||||| ||||||||||||    
T  31292534 tatttgttataagtcttgtagtgtaaattaattaggattgaacacct 31292580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 30827332 - 30827481
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagat-gnnnnnnnttgatgtaaaa 202  Q
    |||||| |||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||| ||||         |||||||||||    
T  30827332 atgtttatgttctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagataaaagaaatttgatgtaaaa 30827431  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| || ||||||||||||||||||    
T  30827432 ttttatttgttataagtcttgtagtgtaaatcaattaagattgaacacct 30827481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 31309861 - 31309712
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaa 202  Q
    ||||||||||||||| |||||||||||||||||| |     |||||||||||||||||||||||||||| |||||||||||       || |||||||||    
T  31309861 atgtttttgttctcacgttcggggttttggaatgaatatttttttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 31309762  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||| ||||||||    
T  31309761 ttttatttgttataagtcttgtagtgtaaattaattaagatcgaacacct 31309712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 49970053 - 49970202
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||| ||| ||||||||||||| |||||||||||        |||||||||||    
T  49970053 atgtttttgttctcacgttcggggttctggaatggaagaaaatttatgaatataaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 49970152  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| | || ||||||||| |||| ||||||||||||||||    
T  49970153 ttttattttttataaatcttgtagtgtaaattatttaagattgaacacct 49970202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 50496016 - 50496158
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg------nnnnnnnttgatgtaa 200  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||             |||||||||    
T  50496016 tttttgttctcacgttcggggttttggaatggatgaaattttatgaatgtaagcgatgaatttaaggacatccagatgaagaaaaaaaaaattgatgtaa 50496115  T
Q  201 aattttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||    
T  50496116 aattttatttgttataagtcttgtagtgtaaattaattaagat 50496158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 27962273 - 27962420
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagat-gnnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||| | ||||||||         |||||||||||    
T  27962273 atgtttttgttctcacgttcggggttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggatatccagataaaagaaatttgatgtaaaa 27962372  T
Q  203 ttttatttgttatagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||| |||||||| |||| || |||||| |||||||||||||||| ||||    
T  27962373 tttgatttgtta-agtcttgcagtgtaaattaattaagattgaatacct 27962420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 3035862 - 3035948
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  3035862 atgattaagattaactcttttatttttagaaaaaatttactcatttatttgacatttaatgttacctatgtatattacattttgatt 3035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 49970310 - 49970407
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||||||| || ||||||||||    
T  49970310 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattgattgatatcatga 49970407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 54919371 - 54919274
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||| ||||| ||| |||||||||| | ||||||||||    
T  54919371 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttatctatgtatcttacattttgattagttgatatcatga 54919274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 31309562 - 31309459
Alignment:
Q  281 tctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatat 380  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||| |||| |||||||||  | |||||    
T  31309562 tctaatgattaagatcaactcttttatttttagaaaaaattgactcatttatttgacatttaatgttacctatgta-attacattttgattggttgatat 31309464  T
Q  381 catga 385  Q
    |||||    
T  31309463 catga 31309459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 35045217 - 35045137
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  35045217 atgtttttgttatcatgttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatctagatg 35045137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 385
Target Start/End: Complemental strand, 46717677 - 46717579
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||| ||||||| ||||| || ||||||||| |||||||||| | ||||||||||    
T  46717677 gattaagattaactcttttatttttagaaaaaatctactcatttatttaacatttaatgttacctatgtatattatattttgattagttgatatcatga 46717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 385
Target Start/End: Complemental strand, 49873692 - 49873594
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  49873692 gattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 49873594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 4652930 - 4652833
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  4652930 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 4652833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 30827597 - 30827680
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  30827597 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 30827680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 7487210 - 7487108
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||| || || || ||||||||| |||||||||  | |||||||    
T  7487210 taataattaagattaactcttttatttttagaaaaaatctattcatttatttgacaattaatgatacctatgtatattacattttgattggttgatatca 7487111  T
Q  383 tga 385  Q
    |||    
T  7487110 tga 7487108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 16664625 - 16664528
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||  |||||||||  | ||||||||||    
T  16664625 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatatttcattttgattggttgatatcatga 16664528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 20354162 - 20354259
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | | |||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  20354162 attaagattaactcttttatttttagaaaaaatctactaatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 20354259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 27962526 - 27962623
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| ||||||||| ||  |||||||||    
T  27962526 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttaattatgtatattacattttgatttatttatatcatga 27962623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 31292688 - 31292785
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  31292688 attaagattaactattttatttttagaaaaaatttacttatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 31292785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 7487484 - 7487422
Alignment:
Q  122 tcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  7487484 tcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatg 7487422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 20787128 - 20787225
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  20787128 attaagattaactctttcatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattggttgatatcatga 20787225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 41041529 - 41041626
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||| |||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  41041529 attaagattaacttttttatttttagaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgattggttgatatcatga 41041626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 385
Target Start/End: Original strand, 13534649 - 13534748
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  13534649 gattaagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattggttgatatcatga 13534748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 23419392 - 23419490
Alignment:
Q  288 attaagattaactcttttatttttag-aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||| |||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  23419392 attaagattaactcttttatttttagaaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgattggttgatatcatga 23419490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 385
Target Start/End: Original strand, 23933641 - 23933739
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||  |||||||  ||| |||||||||||||||  |||||||| ||||||||| ||||| |||  | ||||||||||    
T  23933641 gattaagattaactcttttattttttaaaaaaatctatttatttatttgacatttgatgttatctatgtatattacattttaattggttgatatcatga 23933739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 17361105 - 17361008
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| || | ||||||| ||||| |||  | ||||||||||    
T  17361105 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattacctatatatattacattttaattggttgatatcatga 17361008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 35045028 - 35044944
Alignment:
Q  288 attaagattaa-ctcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||| ||| ||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  35045028 attaagattaaactcatttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 35044944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 30114336 - 30114405
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  30114336 ttttttttatagaaaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgatt 30114405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 52447342 - 52447246
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||| ||| | ||| || | ||||||  ||||||||| || ||||||||||    
T  52447342 attaagattaactcttttatttttagaaaaaatctactcatttatttgaca-ttaatattacctatatatattgcattttgattgattgatatcatga 52447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 8840349 - 8840269
Alignment:
Q  302 ttttatttttaga-aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||||| | ||||||||| |||||||||||||||||| |||||  ||||||||||| ||||||||| || ||||||    
T  8840349 ttttatttttatagaaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgattgattgatatc 8840269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 41041359 - 41041419
Alignment:
Q  192 ttgatgtaaaattttatttgttatag-tcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||||||||||||  || ||||||||| |||||||||||||||||||||    
T  41041359 ttgatgtaaaattttatttgttataaatcttgtagtgtaaattaattaagattgaacacct 41041419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 17519970 - 17520029
Alignment:
Q  284 aatgattaagattaactctttt-atttttagaaaaaattgattcatttatttgacattta 342  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||| |||||||    
T  17519970 aatgattaagattaactctttttatttttagaaaaaatttactcatttatttaacattta 17520029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 7111164 - 7111098
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||| | ||||||    
T  7111164 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgattagttgatatc 7111098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 14270056 - 14270114
Alignment:
Q  313 gaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||| |||||| |||||  ||||||||||| |||||||||    
T  14270056 gaaaaaattgattcatttatttgtcatttaatgttacatttgtatattacattttgatt 14270114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 372
Target Start/End: Complemental strand, 43590381 - 43590311
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatta 372  Q
    |||| ||| |||||||||||||  ||||||||||||||||| |||||  ||||||||||| ||||||||||    
T  43590381 ttttttttatagaaaaaattgacacatttatttgacatttattgttacatttgtatattacattttgatta 43590311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 43594753 - 43594819
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| ||||||||| || ||||||    
T  43594753 aaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgattgattgatatc 43594819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 7113801 - 7113870
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| | |||||||||||||||| |||||  ||||||||||| |||||||||    
T  7113801 ttttttttatagaaaaaattgactaatttatttgacatttaatgttacatttgtatattacattttgatt 7113870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 26923760 - 26923829
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| | |||||||||||||||| |||||  ||||||||||| |||||||||    
T  26923760 ttttttttatagaaaaaattgactaatttatttgacatttaatgttacatttgtatattacattttgatt 26923829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 55450950 - 55451003
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgta 157  Q
    |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  55450950 atgtctttgttctcacgttgggggttctggaatggaagaaattttatgaatgta 55451003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 8081160 - 8081212
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||| |||||    
T  8081160 aaaaattgactcatttatttgacatttaatgttatatttgtatattacatttt 8081212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 19871194 - 19871250
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  19871194 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 19871250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 26917748 - 26917692
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  26917748 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 26917692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 40846754 - 40846810
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  40846754 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 40846810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 51943645 - 51943701
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  51943645 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 51943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 46718505 - 46718625
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  46718505 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttttaagccagtcatgtagtgtaaa 46718604  T
Q  232 ttaattaagattgaacacctg 252  Q
    |||||||||||||||||||||    
T  46718605 ttaattaagattgaacacctg 46718625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 50496210 - 50496274
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattca-tttatttgacatttactgtt 347  Q
    ||||||||||| |||||||||||||  ||||||||||||||| ||| ||||||||||||||| ||||    
T  50496210 ctaatgattaaaattaactctttta--tttagaaaaaattgactcattttatttgacatttaatgtt 50496274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 34072992 - 34072899
Alignment:
Q  294 attaactcttttatttttagaaaaaa--ttgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||| ||||||||||||||||||  |  | |||||||||||||||||| | ||| || ||||||||| |||||||||  | ||||||||||    
T  34072992 attaacttttttatttttagaaaaaaaatctactcatttatttgacatttaatattacctatgtatattacattttgattggttgatatcatga 34072899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 38623572 - 38623638
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| | |||||||||||||||| |||||  ||||||||||| ||||||||| || ||||||    
T  38623572 aaaaattgacttatttatttgacatttaatgttacatttgtatattacattttgattgattgatatc 38623638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 43940339 - 43940405
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| |||||  ||| ||||||| ||||||||| || ||||||    
T  43940339 aaaaattgactcatttatttgacatttaatgttacatttatatattacattttgattgattgatatc 43940405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 35824468 - 35824383
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||| ||||||  ||| |||  | |||||||||||||||||| |||||  | ||||||||| |||||||||    
T  35824468 gattaagattaactctttttattttttaaaataatctactcatttatttgacatttaatgttacttatgtatattacattttgatt 35824383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 55451049 - 55451094
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatt 333  Q
    |||||||||||||||||||||||||||||||||  | |||||||||    
T  55451049 attaagattaactcttttatttttagaaaaaatctactcatttatt 55451094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 19869823 - 19869767
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||| ||||||| |||||||||    
T  19869823 aaaaattgactcatttatttgacatttaatgttacatttatatattacattttgatt 19869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 24577873 - 24577929
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  |||||||||||  ||||||||    
T  24577873 aaaaattgactcatttatttgacatttaatgttacatttgtatattaccttttgatt 24577929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 27956653 - 27956572
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||| ||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| ||||||||| || ||||||||||    
T  27956653 ttttttttatagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattgattgatatcatga 27956572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 43304793 - 43304874
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  43304793 ttttttttttagaaaaaattgactcattta--tgacatttaatgttgtcgatgtatattacattttgattggttgatatcatga 43304874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 49649329 - 49649369
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgtt 347  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  49649329 tttttagaaaaaattgactcatttatttgacatttaatgtt 49649369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 50494873 - 50494810
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||| ||||||| |||||||||| ||||| |  ||||||||| |||||||||    
T  50494873 tttttagaaaaaattgactcattta-ttgacatttaatgttaccaatgtatattacattttgatt 50494810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 7488137 - 7488172
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  7488137 agtcatgtagtgtaaattaattaagattgaacacct 7488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 385
Target Start/End: Original strand, 13861881 - 13861952
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||| |||||||||||| ||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  13861881 aaaaaattgactcatttatttgatatttaatgttgtcaatgtatattacattttgattggttgatatcatga 13861952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 49645890 - 49645839
Alignment:
Q  316 aaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    |||||||| |||||||||||||||||| |||||  ||||||||||| |||||    
T  49645890 aaaattgactcatttatttgacatttaatgttacatttgtatattacatttt 49645839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 34073801 - 34073847
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||    
T  34073801 gaagaaattttatgaatgtaactgataaatttaaggacattcagatg 34073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 51940961 - 51940895
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| |||||  || |||||| | ||||||||| || ||||||    
T  51940961 aaaaattgactcatttatttgacatttaatgttacattagtatatcacattttgattgattgatatc 51940895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 34074916 - 34074990
Alignment:
Q  309 tttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  34074916 tttagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattggttgatatcatga 34074990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 10659119 - 10659175
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||| ||||| |||||  ||||| ||||| |||||||||    
T  10659119 aaaaattgactcatttatttgatatttaatgttacatttgtgtattacattttgatt 10659175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 10873264 - 10873320
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||| ||||| |||||  ||||| ||||| |||||||||    
T  10873264 aaaaattgactcatttatttgatatttaatgttacatttgtgtattacattttgatt 10873320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 50792659 - 50792715
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| ||||| |||| ||||||| |||||  ||||||||||| |||||||||    
T  50792659 aaaaattgactcattcatttaacatttaatgttacatttgtatattacattttgatt 50792715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 121)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 53778180 - 53778332
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||        || |||||    
T  53778180 gatatgtttttgttctcacgttcggggttttgaaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttaatgta 53778279  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  53778280 aaattttatttgttataactcatgtagtgtaaattaattaagattgaacacct 53778332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 16009023 - 16008874
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  16009023 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 16008924  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  16008923 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 16008874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 41101906 - 41101757
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  41101906 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 41101807  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  41101806 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 41101757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 37219909 - 37220058
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||    
T  37219909 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatacagatgaaagaaatttgatgtaaaa 37220008  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  37220009 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 37220058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 47912754 - 47912903
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||        |||||||||||    
T  47912754 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggaaatccagatgaaagaaatttgatgtaaaa 47912853  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  47912854 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 47912903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 50548295 - 50548444
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  50548295 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 50548394  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  50548395 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 50548444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 45170233 - 45170081
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        ||||||||    
T  45170233 gatatgtttttgttctcacgttcgggtttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgta 45170134  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||| |||||| || |||||||||||||||||||||    
T  45170133 aaattttatttgttataagtcttgtagtataaattaattaagattgaacacct 45170081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 4232891 - 4233040
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  4232891 atgtttttgttctcacgttcgaggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaagaaatttgatgtaaaa 4232990  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  4232991 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 4233040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 247
Target Start/End: Complemental strand, 18410451 - 18410306
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  18410451 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 18410352  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaac 247  Q
    |||||||||| || |||| ||||||||| |||||||||||||||||    
T  18410351 ttttatttgtcataagtcttgtagtgtaaattaattaagattgaac 18410306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 27321243 - 27321094
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||    
T  27321243 atgtttttgttctcacgttcggggttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaagaaatttgatgtaaaa 27321144  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  27321143 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 27321094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 30043299 - 30043448
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  30043299 atgtttttgttctcatgttcagggttctggaatggaagaaatttcatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 30043398  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  30043399 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 30043448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 37181782 - 37181931
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||||||||        |||||||||||    
T  37181782 atgtttttgttctcacgttcggggttttgaaatggacgaaattttatgaatgtaagtgatgaattcaaggacatccagatgaaaaaaatttgatgtaaaa 37181881  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  37181882 ttttatttgttataagtcttgtagtgtaaattaattaagattaaacacct 37181931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 44843009 - 44843158
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||        || ||||||||    
T  44843009 atgtttttgttctcacgttcggggttctggaattgaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttaatgtaaaa 44843108  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  44843109 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 44843158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 51722612 - 51722761
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||        || ||||||||    
T  51722612 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgaaagtgatgaatttaaggacatccagatgaaagaaatttaatgtaaaa 51722711  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  51722712 ttttatttgttataagtcttgttgtgtaaattaattaagattgaacacct 51722761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 37785668 - 37785525
Alignment:
Q  108 ttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaatttt 206  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||||||    
T  37785668 ttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaatttt 37785569  T
Q  207 atttgtta-tagtcatgtagtgtagattaattaagattgaacac 249  Q
    ||||||||  |||| ||||||||| |||||||||||||||||||    
T  37785568 atttgttacaagtcttgtagtgtaaattaattaagattgaacac 37785525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 3892496 - 3892649
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-----nnnnnnnttgatgt 198  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||            |||||||    
T  3892496 atgtttttgttctcacgttcggggttttagaatgaaagaaattttatgaatgtaagtgatgaatttaaggatatccagatgaaaaaaaaaaatttgatgt 3892595  T
Q  199 aaaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  3892596 aaaattttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 3892649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 16464154 - 16464005
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||  |||||||||||        |||||||||||    
T  16464154 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaagaaatttgatgtaaaa 16464055  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  16464054 ttttattttttataagtcttgtagtgtaaattaattaagattgaacacct 16464005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 41697908 - 41698057
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||  |||||||||||| |||||||||||        |||||||||||    
T  41697908 atgtttttgttctcacgttcggagttctggaatggaagaaattttatgaatgtaaacgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 41698007  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||||||||||    
T  41698008 ttttatttgttataagtcttgtagtgtaaattaatcaagattgaacacct 41698057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 43338584 - 43338435
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||        |||||||||||    
T  43338584 atgtttttgttctcacattcggagttctggaatggaagaaattttatgaatgtaagtgatgaatttatgaacatcaagatgaaagaaatttgatgtaaaa 43338485  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  43338484 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 43338435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 22428751 - 22428900
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||||||  ||||||||| || |||| ||||||||||||||||| |||||||||||||||| |||||||||||        |||||||||||    
T  22428751 atgtttttgttctcagattcggggttctgaaatgtaagaaattttatgaatgcaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 22428850  T
Q  203 ttttatttgtta-tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||  |||| ||||||||| |||||||||||||||||||||    
T  22428851 ttttatttgttacaagtcttgtagtgtaaattaattaagattgaacacct 22428900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 244
Target Start/End: Complemental strand, 23020026 - 23019881
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccaga-tgnnnnnnnttgatgta 199  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| | |        ||||||||    
T  23020026 gatatgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaagtacatccatattaaagaaatttgatgta 23019927  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattg 244  Q
    |||||||||||||||| |||| | ||||||| ||||||||||||||    
T  23019926 aaattttatttgttataagtcttatagtgtaaattaattaagattg 23019881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 27126445 - 27126296
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||    
T  27126445 atgtttttgttctcacattcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaaaaaatttgatgtaaaa 27126346  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| |||||| || |||||||||||||||||||||    
T  27126345 ttttatttgttataagtcttgtagtttaaattaattaagattgaacacct 27126296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 30440103 - 30440248
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||| |||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  30440103 atgtttttgttttcactttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 30440202  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaac 247  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||    
T  30440203 ttttatttgttataagtcttgaagtgtaaattaattaagattgaac 30440248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 13213697 - 13213547
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgt-aagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaa 201  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||| | ||| |||||        ||||||||||    
T  13213697 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaaatgatgaatttaaggatatctagatgaaagaaatttgatgtaaa 13213598  T
Q  202 attttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| | || ||||||||| |||||||||||||||||||||    
T  13213597 attttatttgttataaatcttgtagtgtaaattaattaagattgaacacct 13213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 27325471 - 27325620
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        ||||| |||||    
T  27325471 atgtttttgttctcacgttcagggttatggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgagagaaatttgatttaaaa 27325570  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||| |||| |||| |||  ||||||||| |||||||||||||||||||||    
T  27325571 tttgattttttataagtgttgtagtgtaaattaattaagattgaacacct 27325620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 27331708 - 27331857
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        ||||| |||||    
T  27331708 atgtttttgttctcacgttcagggttatggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgagagaaatttgatttaaaa 27331807  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||| |||| |||| |||  ||||||||| |||||||||||||||||||||    
T  27331808 tttgattttttataagtgttgtagtgtaaattaattaagattgaacacct 27331857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 45053531 - 45053680
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||| |||||        |||||||||||    
T  45053531 atgtttttattctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggagatctagatgaaagaaatttgatgtaaaa 45053630  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||| ||||||| ||||    
T  45053631 ttttatttgttataagtcttgtagtgtaaattaattaggattgaatacct 45053680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 15084404 - 15084524
Alignment:
Q  133 gaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-gtcatgtagtgtag 230  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||       || ||||||||||||||||||||||| ||| |||||||||     
T  15084404 gaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaattttatttgttataagtcttgtagtgtaa 15084503  T
Q  231 attaattaagattgaacacct 251  Q
    |||||||||||||||||||||    
T  15084504 attaattaagattgaacacct 15084524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 38697076 - 38696937
Alignment:
Q  108 ttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaatttt 206  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||    
T  38697076 ttttgttctcacgttcggagttatggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaatttt 38696977  T
Q  207 atttgttatagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||   |||  ||| | |||||||||||||||||||||    
T  38696976 atttgttata---atg--gtgaaaattaattaagattgaacacct 38696937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 22428944 - 22429029
Alignment:
Q  286 tgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || ||||||||| |||||||||    
T  22428944 tgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttaatgttgcctatgtatattacattttgatt 22429029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 11121836 - 11121687
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||| |||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| | ||| |||||        |||||||||||    
T  11121836 atgtttttattctcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggagatctagatgaaagaaatttgatgtaaaa 11121737  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| || |||  ||||||||| |||||||||||||||||||||    
T  11121736 ttttatttgtcataagtattgtagtgtaaattaattaagattgaacacct 11121687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 282 - 385
Target Start/End: Complemental strand, 55411243 - 55411140
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||  || || |||||| ||||||||| || ||||||    
T  55411243 ctaatgattaagattaactcttttatttttagaaataattgattcatttatttaacatttaatgttggctatgcatattacattttgattgattgatatc 55411144  T
Q  382 atga 385  Q
    ||||    
T  55411143 atga 55411140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 55411428 - 55411283
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||||||||| ||||    |||        |||||||||||    
T  55411428 atgtttttgttctcacgttcggagttttggaattgatgaaattttatgaatgtaagtgatgaatttaaggacat----atgaaagaaatttgatgtaaaa 55411333  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| ||||||| |||||| ||||||||||| |||||||||    
T  55411332 ttttatttgttataagtcatgcagtgtaaattaattaagactgaacacct 55411283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 27320996 - 27320899
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||||    
T  27320996 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttatctatgtatattacattttgattggttgatatcatga 27320899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 104 - 248
Target Start/End: Original strand, 30363492 - 30363638
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| | |||||||||| |||| ||||| ||||||||||||||| |||||||| |||| |||||||||||        |||||||||||    
T  30363492 atgtttttgttctcacgctcggggttttagaatagaagacattttatgaatgtaattgatgaatctaaggacatccagatgaaaaaaatttgatgtaaaa 30363591  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaaca 248  Q
    ||||||||||||| |||| | ||||| | ||||||||||||||||||    
T  30363592 ttttatttgttataagtcttatagtgcaaattaattaagattgaaca 30363638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 38235742 - 38235597
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||||| |||||||||||        || ||||||||    
T  38235742 atgtttttgttctcacgttcggg-ttctggaatggaagaacttttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttaatgtaaaa 38235644  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaaca 248  Q
    ||| ||||||||| |||| ||| ||||| |||| |||||||||||||    
T  38235643 tttcatttgttataagtcttgtggtgtaaattagttaagattgaaca 38235597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 40423921 - 40423780
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattt 205  Q
    |||||||||||| ||||||||||     |||||||||||||||||||||||||||| ||||||||| |||||||||||        | ||||||||||||    
T  40423921 tttttgttctcacgttcggggtt-----atggaagaaattttatgaatgtaagtgaggaatttaaggacatccagatgaaagaaactcgatgtaaaattt 40423827  T
Q  206 tatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  40423826 tatttgttataagtcttgtggtgtaaattaattaagattgaacacct 40423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 40906139 - 40906056
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||| |||||||||    
T  40906139 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctttgtatattacattttgatt 40906056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 44843262 - 44843364
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | |||||||    
T  44843262 taataattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatca 44843361  T
Q  383 tga 385  Q
    |||    
T  44843362 tga 44843364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 3892757 - 3892850
Alignment:
Q  292 agattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||| |||| ||| ||||||||| ||||||||| || ||||||||||    
T  3892757 agattaactcttttatttttagaaaaaatctactcatttatttgacatttagtgttttctatgtatattatattttgattgattgatatcatga 3892850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 22605100 - 22604952
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattt 205  Q
    |||||||||||| ||| |||||| | ||||||||||||||||||||| |||| ||||||||||||| |||| | ||||        ||||||||||||||    
T  22605100 tttttgttctcatgtttggggttctagaatggaagaaattttatgaaagtaaatgatgaatttaaggacattcggatgaaagaaatttgatgtaaaattt 22605001  T
Q  206 tatttgttat---agtcatgtagtgtagattaattaagattgaacacct 251  Q
     |||||||||   |||| ||||||||| |||||||||||||||||||||    
T  22605000 catttgttatataagtcttgtagtgtaaattaattaagattgaacacct 22604952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 37785423 - 37785326
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  37785423 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 37785326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 41101648 - 41101551
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| ||||||||| || ||||||||||    
T  41101648 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgattgattgatatcatga 41101551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 50548563 - 50548660
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  50548563 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 50548660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 53778372 - 53778460
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | || ||| ||||||||| |||||||||    
T  53778372 ctaatgattaaaattaactcttttatttttagaaaa-attgattcatttatttgacatttaatattgtctatgtatattacattttgatt 53778460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 8852222 - 8852316
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  8852222 aagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 8852316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 10827542 - 10827677
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattt 205  Q
    ||||| |||||| |||||||||| |||||| |||||||||||||||||||| || ||||||||||| ||||| |||||        ||||||||||||||    
T  10827542 ttttttttctcacgttcggggttctggaatagaagaaattttatgaatgtatgtcatgaatttaaggacatctagatgaaagaaatttgatgtaaaattt 10827641  T
Q  206 tatttgttat-agtcatgtagtgtagattaattaag 240  Q
    ||||| |||| |||| ||||||||| ||||||||||    
T  10827642 tatttattataagtcttgtagtgtaaattaattaag 10827677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 22604852 - 22604758
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||| |||  | |||||||||||||||||| ||||| || ||||||||| ||||||||| || ||||||||||    
T  22604852 aagattaactcttttatttttagaaataatctactcatttatttgacatttaatgttacctatgtatattacattttgattgattgatatcatga 22604758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 11121216 - 11121119
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||| |||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  11121216 attaagattaacttttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 11121119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 30440355 - 30440452
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||| |||||| | |||||| ||||||||| |||||||||  | ||||||||||    
T  30440355 attaagattaactcttttatttttagaaaaaatctactcatttatttgtcatttaatattatctatgtatattacattttgattggttgatatcatga 30440452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 38235483 - 38235386
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  38235483 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgattggttgatatcatga 38235386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 53845270 - 53845173
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||| |||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  53845270 attaagattaactcttttaattttagaaaaaatatactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 53845173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 6175461 - 6175541
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    |||||||| |||||| ||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  6175461 atgtttttattctcacgtttggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatg 6175541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 371
Target Start/End: Complemental strand, 16008765 - 16008677
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||    
T  16008765 taataattaagattaactcttttatttttagaaaaaatcaactcatttatttgacatttaatgttacctatatatattacattttgatt 16008677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 371
Target Start/End: Complemental strand, 16463890 - 16463810
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  16463890 aagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 16463810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 15084634 - 15084737
Alignment:
Q  283 taatgattaagattaactcttttatttttag-aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    |||| |||||||||||||||||||||||||| |||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||    
T  15084634 taataattaagattaactcttttatttttagaaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatc 15084733  T
Q  382 atga 385  Q
    ||||    
T  15084734 atga 15084737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 2218014 - 2217918
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||| |||||||  | ||||| |||||||||||| |||||||| ||||||||| |||||||||  | ||||||||||    
T  2218014 attaagattaactcttttattttta-aaaaaatctactcattcatttgacatttaatgttatctatgtatattacattttgattggttgatatcatga 2217918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 13213430 - 13213333
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||||||||||| || || || ||||||||| |||||||||  | ||||||||||    
T  13213430 attaagattaactcttttatttttagaaataatatactcatttatttgacatttaatgctacctatgtatattacattttgattggttgatatcatga 13213333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 18410196 - 18410099
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||| |||  | |||||||||||||||||| | ||| || ||||||||| |||||||||  | ||||||||||    
T  18410196 attaagattaactcttttatttttagaaataatctactcatttatttgacatttaatattacctatgtatattacattttgattggttgatatcatga 18410099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 30043561 - 30043657
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  30043561 attaagattaactcttt-atttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 30043657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 37220175 - 37220272
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||||||| || ||||| || | ||||||| |||||||||  | ||||||||||    
T  37220175 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatctaatgttacctatatatattacattttgattggttgatatcatga 37220272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 42826205 - 42826083
Alignment:
Q  131 tggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-agtcatgtagtgt 228  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||| ||||||        || || ||||||||||||| |||| |||| ||||||||    
T  42826205 tggaatggaagatattttatgaatgtaagtgatgaatttaaagacattcagatgaaagaaatttaatataaaattttatttattatgagtcttgtagtgt 42826106  T
Q  229 agattaattaagattgaacacct 251  Q
    | |||||||||||||||||||||    
T  42826105 aaattaattaagattgaacacct 42826083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 8851597 - 8851744
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaa 202  Q
    |||||||| |||||| ||| ||| | ||| |||||||||||||| |||||||||| ||||||||||||| | ||| |||||       || |||||||||    
T  8851597 atgtttttattctcacgttagggttcttg-aatggaagaaattt-atgaatgtaaatgatgaatttaaggagatctagatgaaagaaatttgatgtaaaa 8851694  T
Q  203 ttttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| ||| ||| ||||||||| |||||||||||||||||||||    
T  8851695 ttttatttgtcataagtcttgtagtgtaaattaattaagattgaacacct 8851744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 367
Target Start/End: Complemental strand, 27126182 - 27126104
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||||||||||||||||||||| |||||||||  | |||||||||||||||||| |||||||| ||||||||| |||||    
T  27126182 attaagattaactcttttatttt-agaaaaaatctactcatttatttgacatttaatgttatctatgtatattacatttt 27126104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 38696832 - 38696737
Alignment:
Q  291 aagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| ||||||||||||  |||||||||    
T  38696832 aagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattaatttatatcatga 38696737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 6177280 - 6177377
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||| |||||||||||||||| |||||||  | |||||||||||||||||| || || || | ||||||| |||||||||| | ||||||||||    
T  6177280 attaagatcaactcttttatttttaaaaaaaatctactcatttatttgacatttaatggtacctatatatattacattttgattagttgatatcatga 6177377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 23019821 - 23019725
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||| ||| ||||| || ||||||||| |||| ||||  | ||||||||||    
T  23019821 attaagattaactcttttatttttagaaaaaatctactcatttatttgaca-ttaatgttacctatgtatattacatttcgattggttgatatcatga 23019725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 41698160 - 41698257
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||||||   | |||||||||||| ||||| ||||| || | ||||||| |||||||||  | ||||||||||    
T  41698160 attaagattaactcttttatttttagaaaaaacctactcatttatttgatatttaatgttacctatatatattacattttgattggttgatatcatga 41698257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 10827707 - 10827807
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||| |||   ||||||| ||||| |||  | |||||||||    
T  10827707 atgattatgattaactcttctatttttagaaaaaattgatttatttattcgacatttaatgttgtctacatatattacattttaattggttgatatcatg 10827806  T
Q  385 a 385  Q
    |    
T  10827807 a 10827807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 37182356 - 37182445
Alignment:
Q  294 attaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||| ||||| |  | ||||||| ||||||||| || ||||||||||    
T  37182356 attaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacc--tatatattacattttgattgattgatatcatga 37182445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 47913025 - 47913107
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||| |||||||||  | |||||||||||||| ||| ||||| || ||||||||| |||||||||    
T  47913025 attaagattaactcttttatttt-agaaaaaatctactcatttatttgacaattaatgttacctatgtatattatattttgatt 47913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 40423639 - 40423558
Alignment:
Q  289 ttaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||    
T  40423639 ttaagattaactcttt-atttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgatt 40423558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 55136571 - 55136640
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  55136571 ttttttttatagaaaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 55136640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 4233119 - 4233200
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||| |||||||||||||||||||  | |||||||  ||||||||| ||||| || ||||||||| |||||||||    
T  4233119 attaagattaacttttttatttttagaaaaaatctactcattta--tgacatttaatgttacctatgtatattacattttgatt 4233200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 39132389 - 39132445
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  39132389 aaaaattgactcatttatttgacatttaatgttatatttgtatattacattttgatt 39132445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 43359511 - 43359571
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  43359511 tagaaaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 43359571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 42877117 - 42877038
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    |||| ||| ||||||||||| | |||||||||||||||||| |||||  ||||||||||| ||||||||| || ||||||    
T  42877117 ttttttttatagaaaaaatttactcatttatttgacatttaatgttacatttgtatattacattttgattgattgatatc 42877038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 6489040 - 6488982
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttga 369  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||    
T  6489040 tagaaaaaattgactcatttatttgacatttaatgttacatttgtatattatattttga 6488982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 27239130 - 27239228
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattg-attcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||| || |||||||||||||||||| |  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  27239130 attaagattaccttttttatttttagaaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgattggttgatatcatga 27239228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 37181237 - 37181118
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  37181237 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaaaaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaa 37181138  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  37181137 ttaattaagattgaacacct 37181118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 43338359 - 43338261
Alignment:
Q  288 attaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||| |||||||||||||||  | |||||||||| | ||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  43338359 attaagattaactctttttatttttagaaaaaatctactcatttatttaaaatttaatgttacttatgtatattacattttgattggttgatatcatga 43338261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 2218181 - 2218124
Alignment:
Q  195 atgtaaaattttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  2218181 atgtaaaattgtatttgttataagtcttgtagtgtaaattaattaagattgaacacct 2218124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 22977943 - 22977887
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  22977943 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 22977887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 30362791 - 30362727
Alignment:
Q  192 ttgatgtaaaattttatttgttata-----gtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| ||||| ||     |||||||||||||||||||||||||||||||||||    
T  30362791 ttgatgtaaaattttaattgttctaagccagtcatgtagtgtagattaattaagattgaacacct 30362727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 32001174 - 32001234
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||| |||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  32001174 tagaaaaagttgaatcatttatttgacatttaatgttaaatttgtatattacattttgatt 32001234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 41889655 - 41889711
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  41889655 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 41889711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 43357965 - 43357909
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  43357965 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 43357909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 50935576 - 50935520
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  50935576 aaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgatt 50935520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 2218226 - 2218179
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatg 151  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||    
T  2218226 atgtttttgttctcacgttcggggttctagaatggaagaaattttatg 2218179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 2218794 - 2218910
Alignment:
Q  137 ggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-gtcatgtagtgtagatta 234  Q
    |||| ||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| || ||| ||||||||| ||||    
T  2218794 ggaataaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagtcctgtagtgtaaatta 2218893  T
Q  235 attaagattgaacacct 251  Q
    |||||||||||||||||    
T  2218894 attaagattgaacacct 2218910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 45053782 - 45053860
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||||||||||||||| ||||||| |||||||  | |||||||||||||||||| | ||| || ||||||||| |||||    
T  45053782 attaagattaactcttt-atttttataaaaaatctactcatttatttgacatttaatattaactatgtatattatatttt 45053860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 22605664 - 22605784
Alignment:
Q  136 tggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata----gtcatgtagtgtag 230  Q
    ||||| ||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||||||    ||| |||||||||     
T  22605664 tggaataaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttataaccagtcctgtagtgtaa 22605763  T
Q  231 attaattaagattgaacacct 251  Q
    |||||||||||||||||||||    
T  22605764 attaattaagattgaacacct 22605784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 22732456 - 22732583
Alignment:
Q  126 ggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-agtcatgt 223  Q
    |||| |||||| |||||||||||||||||||||  |||| ||||||| ||||| | |||        ||||||| |||||||| ||||||| || | | |    
T  22732456 ggttatggaattgaagaaattttatgaatgtaaccgatggatttaaggacatctaaatgaaagaaaattgatgtgaaattttaattgttataagccctat 22732555  T
Q  224 agtgtagattaattaagattgaacacct 251  Q
    |||||| |||||||||||||||||||||    
T  22732556 agtgtaaattaattaagattgaacacct 22732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 31312874 - 31312755
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  31312874 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaa 31312775  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  31312774 ttaattaagattgaacacct 31312755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 27238956 - 27239009
Alignment:
Q  199 aaaattttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  27238956 aaaattttatttattataagtcttgtagtgtaaattaattaagattgaacacct 27239009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 54409488 - 54409419
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||| | |||||||||||| ||||| |||||  ||||||||||| |||||||||    
T  54409488 ttttttttatagaaaaaattaactcatttatttgatatttaatgttacatttgtatattacattttgatt 54409419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 7041684 - 7041628
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| ||||||||||| |||||| |||||  ||||||||||| |||||||||    
T  7041684 aaaaattgactcatttatttggcatttaatgttacatttgtatattacattttgatt 7041628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 10825871 - 10825811
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||||||||||||||| |||||||||||| ||||| |||| ||  ||||||||| |||||    
T  10825871 tttttagaaaaaattgactcatttatttgatatttaatgttgtcaatgtatattacatttt 10825811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 11122489 - 11122525
Alignment:
Q  215 tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11122489 tagtcatgtagtgtaaattaattaagattgaacacct 11122525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 38697741 - 38697777
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacctg 252  Q
    |||||||||||||| ||||||||||||||||||||||    
T  38697741 agtcatgtagtgtaaattaattaagattgaacacctg 38697777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 40906309 - 40906249
Alignment:
Q  192 ttgatgtaaaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||| |||| ||||||||||    
T  40906309 ttgatgtaaaattttatttgttataagtcttatagtgtaaattaactaaggttgaacacct 40906249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 42163408 - 42163352
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||  |||||||||    
T  42163408 aaaaattgactcatttatttgacatttaatgttaaatttgtatattgcattttgatt 42163352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 42826008 - 42825976
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaat 320  Q
    |||||||||||||||||||||||||||||||||    
T  42826008 attaagattaactcttttatttttagaaaaaat 42825976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 45169922 - 45169862
Alignment:
Q  325 tcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||| ||||| || ||||||||| |||||||||| | ||||| ||||    
T  45169922 tcatttatttgacatttaatgttacctatgtatattacattttgattagttgatattatga 45169862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 367
Target Start/End: Original strand, 50938470 - 50938522
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||    
T  50938470 aaaaattgactcatttatttgacatttaatgttacatttgtatattacatttt 50938522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 8850943 - 8850908
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  8850943 agtcatgtagtgtaaattaattaagattgaacacct 8850908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 368
Target Start/End: Original strand, 27325730 - 27325809
Alignment:
Q  289 ttaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttg 368  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||| | ||||| || || || | ||||||| ||||||    
T  27325730 ttaagattaacccttttatttttagaaaaaatctactcatttatttaatatttaatgctacctatatatattacattttg 27325809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 368
Target Start/End: Original strand, 27331967 - 27332046
Alignment:
Q  289 ttaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttg 368  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||| | ||||| || || || | ||||||| ||||||    
T  27331967 ttaagattaacccttttatttttagaaaaaatctactcatttatttaatatttaatgctacctatatatattacattttg 27332046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 30042650 - 30042615
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  30042650 agtcatgtagtgtaaattaattaagattgaacacct 30042615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 38236407 - 38236442
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  38236407 agtcatgtagtgtaaattaattaagattgaacacct 38236442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 40907027 - 40907062
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  40907027 agtcatgtagtgtaaattaattaagattgaacacct 40907062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 45052878 - 45052843
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  45052878 agtcatgtagtgtaaattaattaagattgaacacct 45052843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 371
Target Start/End: Complemental strand, 48071837 - 48071782
Alignment:
Q  316 aaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||| |||||||| ||||||||| |||||  ||||||||||| |||||||||    
T  48071837 aaaattgactcatttatctgacatttaatgttacatttgtatattatattttgatt 48071782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 50610327 - 50610362
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  50610327 agtcatgtagtgtaaattaattaagattgaacacct 50610362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 53776528 - 53776446
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||||||||||| |||| ||||| |||| ||  ||||||||| ||||| |||  | ||||||||||    
T  53776528 ttttttttttagaaaaaattgattcattta-ttgatatttaatgttgtcaatgtatattacattttaattggttgatatcatga 53776446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 51722051 - 51722006
Alignment:
Q  139 aagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||    
T  51722051 aagaaattttatgaatgtaactgataaatttaaggacattcagatg 51722006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 55412018 - 55412063
Alignment:
Q  139 aagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||    
T  55412018 aagaaattttatgaatgtaaatgataaatttaaggacattcagatg 55412063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 3890898 - 3890817
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||| ||  | ||||||| |||||||||  | ||||||||||    
T  3890898 ttttttttttagaaaaaattgagtcattta--tgacatttaatgttgtcaatatatattacattttgattggttgatatcatga 3890817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 22732675 - 22732747
Alignment:
Q  300 tcttttatttttag-aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||| ||||||| |||||||||| |||||||||| ||||||| | |||| |  |||||||| |||||||||    
T  22732675 tcttttttttttagaaaaaaattgactcatttatttaacatttaatattatatacgtatattacattttgatt 22732747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 43860596 - 43860556
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacattta 342  Q
    |||| ||| ||||||||||||| ||||||||||||||||||    
T  43860596 ttttttttatagaaaaaattgactcatttatttgacattta 43860556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 43863124 - 43863180
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||| | |||||  ||||||||||  |||||||||    
T  43863124 aaaaattgactcatttatttgacattcaatgttacatttgtatattgcattttgatt 43863180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 9e-43; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 27550989 - 27550840
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  27550989 atgtttttgttctcacgttcggggttttagaatagaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaaatttgatgtaaaa 27550890  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  27550889 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 27550840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 12499610 - 12499461
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  12499610 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcgagatgaaataaatttgatgtaaaa 12499511  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  12499510 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 12499461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 37270638 - 37270489
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||        ||||| |||||    
T  37270638 atgtttttgttctcaggttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatataaaa 37270539  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  37270538 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 37270489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 42612058 - 42612207
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  42612058 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 42612157  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  42612158 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 42612207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 745411 - 745560
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  745411 atgtttttgttctcacgttcagggttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 745510  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  745511 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 745560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 7180895 - 7181044
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||| |||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  7180895 atgtttttattctcacgttctgggttttagaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaaatttgatgtaaaa 7180994  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  7180995 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 7181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 9592010 - 9591861
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||        |||||||||||    
T  9592010 atgtttttgttctcacgttcagggttctggaatggaagaaattttatgaatgtaaatgatgaatttaacaacatctagatgaaagaaatttgatgtaaaa 9591911  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  9591910 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 9591861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 19665163 - 19665014
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||||||||| ||||||||||||  |||||||||||        |||||||||||    
T  19665163 atgtttttgttctcacgttcggggttctgtaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaagaaatttgatgtaaaa 19665064  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  19665063 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 19665014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 31551966 - 31552120
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatg----taagtgatgaatttaagaacatccagatg--nnnnnnnttgatg 197  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||    ||||||||||||||||| |||||||||||         ||||||    
T  31551966 atgtttttgttctcacgttcggggttttagaatggaagaaattttatgaatgtaattaagtgatgaatttaaggacatccagatgaaaaaaaatttgatg 31552065  T
Q  198 taaaattttatttgtta-tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  31552066 taaaattttatttgttattagtcttgtagtgtaaattaattaagattgaacacct 31552120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 9987159 - 9987308
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||        |||||||||||    
T  9987159 atgtttttgttctcacgttcgggattttagaatggaagaaattttatgaatgtaattgatgaatttaaggacatctagatgaaaaatatttgatgtaaaa 9987258  T
Q  203 ttttatttgtt-atagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||||||||    
T  9987259 ttttatttgttaaaagtcttgtagtgtaaattaattaagattgaacacct 9987308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 20545994 - 20546142
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  20545994 atgtttttgt-ctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 20546092  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  20546093 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 20546142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 30130759 - 30130908
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||        |||||||||||    
T  30130759 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatataaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 30130858  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||  | ||||||| |||||||||||||||||||||    
T  30130859 ttttatttgttataagttttatagtgtaaattaattaagattgaacacct 30130908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 27019936 - 27020083
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||| ||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  27019936 atgtttttgttctcacgttcggggttctagaatggaaaaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 27020035  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacac 249  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  27020036 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacac 27020083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 13305267 - 13305416
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||        |||||||||||    
T  13305267 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccaaatgaaagaaatttgatgtaaaa 13305366  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||| ||||||||| |||  ||| ||||| || ||||| ||||||||||||    
T  13305367 tttaatttgttataagtgttgtggtgtaaatcaattatgattgaacacct 13305416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 39588660 - 39588510
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  39588660 atgtttttgttctcacgttcggagttctggaatgaaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 39588561  T
Q  203 -ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
     ||||||||||||| |||| |||| |||| |||||||||||||||||||||    
T  39588560 tttttatttgttataagtcttgtaatgtaaattaattaagattgaacacct 39588510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 824651 - 824800
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||  |||| ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||        |||||||||||    
T  824651 atgtttttgttctcacgttcatggttctggaatgaaagaaattgtatggatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 824750  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| ||||||||||| |||||||||    
T  824751 ttttatttgttataagtcttctagtgtaaattaattaagagtgaacacct 824800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 34663502 - 34663602
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| || |||||| || |||||||||  | |||||||||    
T  34663502 atgattaagattaactcttttatttttagaaaaaattgagtcacttatttgacatttaatgttacctatgtatactacattttgattggttgatatcatg 34663601  T
Q  385 a 385  Q
    |    
T  34663602 a 34663602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 745665 - 745762
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  745665 attaagattaactcttttatttttagaaataatttactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 11076936 - 11076836
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||  || |||| |||| |||||||||  | |||||||||    
T  11076936 atgattaagattaactcttttatttttagaaaaaattgacgcatttatttgacatttaatgttgcctatgtaaattatattttgattggttgatatcatg 11076837  T
Q  385 a 385  Q
    |    
T  11076836 a 11076836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 15420593 - 15420440
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattt-----tatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatg 197  Q
    ||||||||||||||| ||||||| || || ||||||||||||||     ||||||||||| ||||||||||||| |||||||||||        ||||||    
T  15420593 atgtttttgttctcacgttcgggtttctgaaatggaagaaatttaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatg 15420494  T
Q  198 taaaattttatttgttatagtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||||||    ||||||||| ||||||||||||| |||||||    
T  15420493 taaaattttatttgttataagtttgtagtgtaaattaattaagatttaacacct 15420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 34654184 - 34654250
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaat 167  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  34654184 gatatgtttttgttctcacgttcggggttctggaatggaagaaattttatgagtgtaagtgatgaat 34654250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 37940048 - 37940150
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | || ||||||||||||||| ||||| || ||||||||| |||||||||  | |||||||    
T  37940048 taataattaagattaactcttttatttttagaaaaaatctactcgtttatttgacatttaatgttacctatgtatattacattttgattggttgatatca 37940147  T
Q  383 tga 385  Q
    |||    
T  37940148 tga 37940150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 20546255 - 20546352
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||| | |||||||||  | ||||||||||    
T  20546255 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatataacattttgattggttgatatcatga 20546352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 371
Target Start/End: Original strand, 42612315 - 42612403
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||||||||||| ||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  42612315 taataattaagattaactcatttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 42612403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 824901 - 824984
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||| || | ||||||| |||||||||    
T  824901 attaagattaattcttttatttttagaaaaaatttactcatttatttgacatttaatgttacctatctatattacattttgatt 824984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 19664898 - 19664804
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||| |||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  19664898 aagattaacttttttatttttagaaaaaatatactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 19664804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 9591749 - 9591652
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||| |||||||||||||    |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  9591749 attaagattaactcttttaattttagaaaaaatcttctcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 9591652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 12499357 - 12499260
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||| |||||||||||||||||||||||||  | |||||||||| ||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  12499357 attaagaataactcttttatttttagaaaaaatctactcatttatttaacatttaatgttacctatgtatattacattttgattggttgatatcatga 12499260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 371
Target Start/End: Complemental strand, 39588402 - 39588314
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||||||||||| ||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||    
T  39588402 taataattaagattaactcatttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgatt 39588314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 9987380 - 9987480
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaa---ttgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||||||||||||||||||||||||||||   |  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | |||||||||    
T  9987380 attaagattaactcttttatttttagaaaaaaaaatatactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatg 9987479  T
Q  385 a 385  Q
    |    
T  9987480 a 9987480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 11984851 - 11984705
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| || |||| || | |||| ||||| ||||||||||||||| ||||||||||||| | ||| |||||        |||||||||||    
T  11984851 atgtttttgttctcacgtacgggattctagaatagaagacattttatgaatgtaaatgatgaatttaaggagatcaagatgaaagaaatttgatgtaaaa 11984752  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaaca 248  Q
    ||||||||||||| |||| |||| ||||  |||||||| ||||||||    
T  11984751 ttttatttgttataagtcttgtaatgtaatttaattaaaattgaaca 11984705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 13305529 - 13305626
Alignment:
Q  288 attaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    |||||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | |||||||||    
T  13305529 attaagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattggttgatatcatg 13305626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 11077039 - 11076979
Alignment:
Q  192 ttgatgtaaaattttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  11077039 ttgatgtaaaattttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 11076979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 11984619 - 11984519
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| ||||||||||||||||||||||||||| |||||  | |||||||||||||||||| ||||| |  | ||||||| |||||||||  | |||||||    
T  11984619 taataattaagattaactcttttatttttagataaaatctactcatttatttgacatttaatgttacc--tatatattacattttgattggttgatatca 11984522  T
Q  383 tga 385  Q
    |||    
T  11984521 tga 11984519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 34401654 - 34401556
Alignment:
Q  288 attaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||| |||||||||||||||  | |||||||||||| ||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  34401654 attaagattaactctttttatttttagaaaaaatctactcatttatttgatatttaatgttacttatgtatattacattttgattggttgatatcatga 34401556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 371
Target Start/End: Complemental strand, 34858057 - 34858003
Alignment:
Q  317 aaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  34858057 aaattgattcatttatttgacatttaatgttatatttgtatattacattttgatt 34858003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 5102928 - 5102997
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||  ||||||||| | |||||||||    
T  5102928 ttttttttatagaaaaaattgattcatttatttgacatttaatgttacatttgtatatcacattttgatt 5102997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 385
Target Start/End: Complemental strand, 27550736 - 27550644
Alignment:
Q  294 attaactcttttatttttagaaaaaattg-attcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||| |  | |||||||||||| ||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  27550736 attaactcttttatttttagaaaaaaatctactcatttatttgaaatttaatgttacctatgtatattacattttgattggttgatatcatga 27550644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 31552226 - 31552305
Alignment:
Q  294 attaactcttttatttttagaaaaaa--ttgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  31552226 attaactcttttatttttagaaaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 31552305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 37256343 - 37256399
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  37256343 aaaaattgactcatttatttgacatttaatgttatatttgtatattacattttgatt 37256399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 8526234 - 8526303
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||| |||||||||| |||||||||||||||||| |||||  |||||||| || |||||||||    
T  8526234 ttttttttttataaaaaattgactcatttatttgacatttaatgttacatttgtatagtacattttgatt 8526303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 11078383 - 11078447
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||| |||||||||| |||||||||||||||||| |||| ||  ||||||||| |||||||||    
T  11078383 tttttaaaaaaaattgactcatttatttgacatttaatgttgtcaatgtatattacattttgatt 11078447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 15524227 - 15524171
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  15524227 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 15524171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 15527232 - 15527288
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  15527232 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 15527288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 29639443 - 29639383
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||| |||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  29639443 tagaaaaacttgactcatttatttgacatttaatgttacatttgtatattacattttgatt 29639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 744840 - 744720
Alignment:
Q  137 ggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtag 230  Q
    |||| ||||||||||||||||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||||||     ||| |||||||||     
T  744840 ggaataaattttatgaatgtaactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttataagccagtcctgtagtgtaa 744741  T
Q  231 attaattaagattgaacacct 251  Q
    |||||||||||||||||||||    
T  744740 attaattaagattgaacacct 744720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 27551562 - 27551681
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-----agtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||        ||||||| |||||||| ||||| |     |||||||||||||| |    
T  27551562 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaa 27551661  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||| ||||||||||||    
T  27551662 ttaattaggattgaacacct 27551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 381
Target Start/End: Original strand, 6720842 - 6720907
Alignment:
Q  317 aaattgattcatttatttgacatttactgtta-tctttgtatattaaattttgattaatagatatc 381  Q
    |||||||||||||||||||||||||| |||||   ||||||||||| ||||||||| || ||||||    
T  6720842 aaattgattcatttatttgacatttaatgttacattttgtatattacattttgattgattgatatc 6720907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 37270384 - 37270299
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||| ||||| | |||||||||||||  | |||||||||||||||||| ||||   | ||||||||| |||||||||    
T  37270384 gattaagattaaccctttttagttttagaaaaaatctactcatttatttgacatttaatgttccttatgtatattacattttgatt 37270299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 15420345 - 15420313
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaat 320  Q
    |||||||||||||||||||||||||||||||||    
T  15420345 attaagattaactcttttatttttagaaaaaat 15420313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 37939652 - 37939616
Alignment:
Q  215 tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37939652 tagtcatgtagtgtaaattaattaagattgaacacct 37939616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 7180821 - 7180786
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  7180821 agtcatgtagtgtaaattaattaagattgaacacct 7180786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 27019283 - 27019248
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  27019283 agtcatgtagtgtaaattaattaagattgaacacct 27019248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 29390934 - 29390993
Alignment:
Q  312 agaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||| ||| |||||||||||||||||| |||||  ||||||||||  |||||||||    
T  29390934 agaaaaaaatgaatcatttatttgacatttaatgttacatttgtatattgcattttgatt 29390993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 371
Target Start/End: Complemental strand, 6719581 - 6719535
Alignment:
Q  325 tcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  6719581 tcatttatttgacatttaatgttacatttgtatattacattttgatt 6719535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 7179803 - 7179705
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    |||||||| ||| | | |||| ||| ||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||  | |||||||||    
T  7179803 atgattaaaattgatttttttttttatagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattggttgatatcatg 7179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 20545361 - 20545325
Alignment:
Q  215 tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  20545361 tagtcctgtagtgtaaattaattaagattgaacacct 20545325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 9e-43; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 29521726 - 29521875
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  29521726 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 29521825  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  29521826 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 29521875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 33704808 - 33704659
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  33704808 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 33704709  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  33704708 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 33704659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 36308050 - 36307901
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  36308050 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 36307951  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  36307950 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 36307901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 12768448 - 12768308
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  12768448 atgtttttgttctcaagttcggggttttggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 12768349  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    ||||||||||||| |||| ||||||||| ||||||||||||    
T  12768348 ttttatttgttataagtcttgtagtgtaaattaattaagat 12768308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 33006258 - 33006410
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||        |||||| |    
T  33006258 gatatgtttttgttctcacgttcggggttttgaaatggaagaaattttatgaatgtaagtgaagaatttgaggacatccagatgaaagaaatttgatgca 33006357  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  33006358 aaattttatttgttataagtcatgtagtgtaaattaattaagattgaacacct 33006410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 14488623 - 14488772
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  14488623 atgtttttgttctcacgttcggggttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 14488722  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  14488723 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 14488772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 24781272 - 24781123
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||        |||||||||||    
T  24781272 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgattaatttaaggacatccagatgaaagaaatttgatgtaaaa 24781173  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  24781172 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 24781123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 25656058 - 25655909
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  25656058 atgtttttgttctcacgttcggggttttataatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaaaattgatgtaaaa 25655959  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| |||||||    
T  25655958 ttttatttgttataagtcttgtagtgtaaattaattaagattaaacacct 25655909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 48127982 - 48127833
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||        |||||||||||    
T  48127982 atgtttttgttctcacgttcggggttttagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaatgaaagaaatttgatgtaaaa 48127883  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  48127882 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 48127833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 7153132 - 7152983
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  7153132 atgtttttgttctcacgttcggggttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 7153033  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  7153032 ttttatttgttataagtcttatagtgtaaattaattaagattgaacacct 7152983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 35954625 - 35954476
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  35954625 atgtttttgttctcacgttcggggttctagaatggaagaaattttatgaatgtaagtgatgaatttaagtacatccagatgacagaaatttgatgtaaaa 35954526  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| | | ||||| |||||||||||||||||||||    
T  35954525 ttttatttgttataagtcttatggtgtaaattaattaagattgaacacct 35954476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 36730874 - 36730727
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  36730874 atgtttttgttctcacgttcgggattctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 36730775  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacac 249  Q
    |||||||| |||| |||| ||| ||||| |||||||||||||||||||    
T  36730774 ttttatttattataagtcttgtggtgtaaattaattaagattgaacac 36730727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 10772938 - 10772792
Alignment:
Q  107 tttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattt 205  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||        ||||||||||||||    
T  10772938 tttttgttctcacgttcggggttcttgaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaattt 10772839  T
Q  206 tatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| |||  ||||||||| |||||||||||||||||||||    
T  10772838 tatttgttataagttttgtagtgtaaattaattaagattgaacacct 10772792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 31030298 - 31030149
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||| |||||||| ||||| |||||        |||||||||||    
T  31030298 atgtttttgttctcacgttcggggttctggaattgaagaaattttatgaatgtaaatgataaatttaaggacatcgagatgaaataaatttgatgtaaaa 31030199  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  31030198 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 31030149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 30302819 - 30302971
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccaga-tgnnnnnnnttgatgta 199  Q
    |||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |        ||||| ||    
T  30302819 gatatgtttttgttctcacgttcggggttatggaattgaataaattttatgaatgtaagtgatgaatttaaggacatccagattaaataaatttgattta 30302918  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| | || ||||||||| |||||||||||||||||||||    
T  30302919 aaattttatttgttataattcttgtagtgtaaattaattaagattgaacacct 30302971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 44512221 - 44512368
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||| ||| |||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  44512221 atgtttttgttttcacgttcggggttctagaatggaataaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 44512320  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacac 249  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  44512321 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacac 44512368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 33006450 - 33006550
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||  ||||||||  ||||||||    
T  33006450 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttaatgttgtctatgtatattactttttgattggtagatatc 33006549  T
Q  382 a 382  Q
    |    
T  33006550 a 33006550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 52404806 - 52404660
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttgatgtaaaat 203  Q
    ||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||| | ||||| ||||||| |||       ||||||||||||    
T  52404806 atgtttttgttctcacgtttggggttctggaatggaagaaa-tttatgaatgtaagtgatgga-ttaaggacatccaaatgataaaatttgatgtaaaat 52404709  T
Q  204 tttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||| |||||||| |||| ||||||||| |||||||||||||||||||||    
T  52404708 tttgtttgttataagtcttgtagtgtaaattaattaagattgaacacct 52404660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 30303013 - 30303113
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  || ||||||||| |||||||||  | |||||||||    
T  30303013 atgattaagattaactcttttatttttagaaaaaattgactcatttatttgacatttaatgttgcctatgtatattacattttgattggttgatatcatg 30303112  T
Q  385 a 385  Q
    |    
T  30303113 a 30303113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 385
Target Start/End: Complemental strand, 7556239 - 7556141
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||||| || ||||||||| ||||||||| || ||||||||||    
T  7556239 gattaagattaactcttttatttttagaaaaaatcgactcatttatttgatatttaatgttacctatgtatattacattttgattgattgatatcatga 7556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 29649522 - 29649639
Alignment:
Q  133 gaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttat-agtcatgtagtgtag 230  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||       || |||||||||||||||||||||| |||| |||||||||     
T  29649522 gaatggaagaaattttatgaatgttagtgatgaatttaaggacatcaagatgaaagaaatttgatgtaaaattttatttgttataagtcttgtagtgtaa 29649621  T
Q  231 attaattaagattgaaca 248  Q
    ||||||||||||||||||    
T  29649622 attaattaagattgaaca 29649639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 247
Target Start/End: Complemental strand, 46118444 - 46118300
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccaga-tgnnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||| | || |||||||||| ||||||||||||||||||||||||||||||| ||||||| | |        ||||| |||||    
T  46118444 atgtttttgttctcacgttcgag-ttctggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccaaattaaataaatttgatttaaaa 46118346  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaac 247  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  46118345 ttttatttgttataagtcctgtagtgtaaattaattaagattgaac 46118300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 52404617 - 52404517
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||| | ||||||| |||||||||  | |||||||||    
T  52404617 atgattaagattaactcatttatttttagaaaaaattgactcatttatttgacatttaatgttgtctatatatattatattttgattggttgatatcatg 52404518  T
Q  385 a 385  Q
    |    
T  52404517 a 52404517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 44512452 - 44512554
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | |||||||    
T  44512452 taataattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatca 44512551  T
Q  383 tga 385  Q
    |||    
T  44512552 tga 44512554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 5326927 - 5326777
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||| ||||||| | | ||||||| |||||| |||||||||||||||||||||||||||||||||  |||||  ||||        |||||||||||    
T  5326927 atgttttggttctcacggttggggtttcggaatgaaagaaattttatgaatgtaagtgatgaatttaaagacatctggatgaaagaaatttgatgtaaaa 5326828  T
Q  203 ttttatttgttat-agtc-atgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  5326827 ttttatttgttataagtctttgtagtgtaaattaattaagattgaacacct 5326777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 10772685 - 10772588
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  10772685 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 10772588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 31030036 - 31029939
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||  |||||||| ||||||||| || ||||||||||    
T  31030036 attaagaataactcttttatttttagaaaaaatttactcatttatttgacatttaatgttacctacgtatattacattttgattgattgatatcatga 31029939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 46118253 - 46118153
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| || ||||| || ||||||||| |||||||||  | |||||||||    
T  46118253 atgattaggattaactctattatttttagaaaaaattgactcatttatttgacatataatgttacctatgtatattacattttgattggttgatatcatg 46118154  T
Q  385 a 385  Q
    |    
T  46118153 a 46118153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 371
Target Start/End: Complemental strand, 48127725 - 48127637
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  48127725 taataattaagattaactcttttatttttagaaaaaatatactcatttatttgacatttaatgttacctatgtatattacattttgatt 48127637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 33704547 - 33704464
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||    
T  33704547 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgatt 33704464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 290 - 385
Target Start/End: Complemental strand, 51086715 - 51086620
Alignment:
Q  290 taagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| || | ||||||| |||||||||  | ||||||||||    
T  51086715 taagattaactcttttatttttagaaaaaatctattcatttatttgacatttaatgttacctatatatattacattttgattggttgatatcatga 51086620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 21096784 - 21096687
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||  || ||||||||| |||||||||  | ||||||||||    
T  21096784 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgtttcctatgtatattacattttgattggttgatatcatga 21096687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 7152859 - 7152764
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcat 383  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||| ||| ||||| || ||||||||| ||||| |||| | ||||||||    
T  7152859 attaagattaactcttttatttttagaaaaaatctactcatttatttgacacttaatgttacctatgtatattacattttaattagttgatatcat 7152764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 29521981 - 29522082
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | ||||||||||    
T  29521981 gattaagattaactctttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattggttgatatcatga 29522080  T
Q  386 ca 387  Q
    ||    
T  29522081 ca 29522082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 30838599 - 30838659
Alignment:
Q  192 ttgatgtaaaattttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  30838599 ttgatgtaaaattttatttgttataagtcatgtagtgtaaattaattaagattgaacacct 30838659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 25655806 - 25655711
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattg-attcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||| |  | |||||||||||||||||| | ||| || ||||||||| ||||||||| || ||||||||||    
T  25655806 aagattaactcttttatttttagaaaaaaatatactcatttatttgacatttaatattacctatgtatattacattttgattgattgatatcatga 25655711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 30838776 - 30838859
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||||||||||| ||||| || |||||| || |||||||||    
T  30838776 attaagattaactcttttatttttggaaaaaatctactcatttatttgacatttaatgttacctatgtatagtacattttgatt 30838859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 5326734 - 5326673
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtt 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  5326734 atgattaagattaactcttttatttttaga-aaaattgattcatttatttgacctttaatgtt 5326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 36307797 - 36307699
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtta-tctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | | |||||||||||||||| ||||| | | ||||||||| |||||||||  | ||||||||||    
T  36307797 attaagattaactcttttatttttagaaaaaatctacttatttatttgacatttaatgttactatatgtatattacattttgattggttgatatcatga 36307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 35954371 - 35954271
Alignment:
Q  284 aatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcat 383  Q
    ||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||| ||||  | ||||||||    
T  35954371 aatgattaagattaactcttt-atttttagaaaaaatctactcatttatttgacatttaatgttacctatctatattacatttcgattggttgatatcat 35954273  T
Q  384 ga 385  Q
    ||    
T  35954272 ga 35954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 12768256 - 12768194
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtt 347  Q
    ||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||| ||||    
T  12768256 ctaatgattaagattaactcttttatttttag---aaattgactcatttatttgacatttaatgtt 12768194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 14488858 - 14488937
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| | |||  | ||||||||| |||||    
T  14488858 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattacttatgtatattacatttt 14488937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 5328799 - 5328877
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| |||||||||||| |||||||||||||||||| |||| ||  ||||||||| ||||||||| || ||||||||||    
T  5328799 ttttaagaaaaaattgactcatttatttgacatttaatgttgtcaatgtatattacattttgattgattgatatcatga 5328877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 24781012 - 24780915
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||| || ||||||||||||||||||  |   |||||||||||||||| ||||| || ||||||||| |||| |||| || ||||||||||    
T  24781012 attaagattaaatcctttatttttagaaaaaatctacaaatttatttgacatttaatgttacctatgtatattacatttcgattgattgatatcatga 24780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 4640334 - 4640390
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||    
T  4640334 aaaaattgattcatttatttgacatttaatgttacatttgtatattacattttgatt 4640390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 34334243 - 34334319
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatatta 361  Q
    |||||||||||||| | ||||| ||||| |||||||||| | |||||||||||||||| |||| ||| |||||||||    
T  34334243 atgattaagattaatttttttacttttaaaaaaaattgacttatttatttgacatttaatgttgtctatgtatatta 34334319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 52405907 - 52405848
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatg 164  Q
    ||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||    
T  52405907 atgtttttgttctcacgtttggggttctggaatggaagaaa-tttatgaatgtaagtgatg 52405848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 52406239 - 52406180
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatg 164  Q
    ||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||    
T  52406239 atgtttttgttctcacgtttggggttctggaatggaagaaa-tttatgaatgtaagtgatg 52406180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 43846320 - 43846254
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||| | ||||||    
T  43846320 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgattagttgatatc 43846254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 44300165 - 44300235
Alignment:
Q  302 ttttatttttaga-aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||| | ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  44300165 ttttatttttatagaaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgatt 44300235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 52407329 - 52407403
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||| |||||||||||||||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  52407329 tagaaaaaattgactcatttatttgacatttaatgttgtcaatgtatattacattttgattggttgatatcatga 52407403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 342
Target Start/End: Original strand, 29649687 - 29649736
Alignment:
Q  293 gattaactcttttatttttagaaaaaattgattcatttatttgacattta 342  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  29649687 gattaactcttttatttttagaaaaaaatgactcatttattggacattta 29649736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 4638273 - 4638209
Alignment:
Q  307 tttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||| | |||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  4638273 tttttatagaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 4638209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 23264093 - 23264149
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  23264093 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 23264149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 43847692 - 43847748
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  43847692 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 43847748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 44299181 - 44299125
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  44299181 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 44299125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 33004591 - 33004509
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| ||||||| |||||||||| |||| ||  ||||||||| |||||||||| | ||||| ||||    
T  33004591 ttttttttttagaaaaaattgactcattta-ttgacatttaatgttgtcaatgtatattacattttgattagttgatattatga 33004509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 36730577 - 36730522
Alignment:
Q  294 attaactctttt-atttttagaaaaaattgattcatttatttgacatttactgtta 348  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||| |||||    
T  36730577 attaactctttttatttttagaaaaaatttattcatttatttgatatttaatgtta 36730522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 51086893 - 51086838
Alignment:
Q  192 ttgatgtaaaattttatttgttat-agtcatgtagtgtagattaattaagattgaa 246  Q
    |||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||    
T  51086893 ttgatgtaaaattttatttgttataagtcttgtggtgtaaattaattaagattgaa 51086838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 25656626 - 25656745
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-----agtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||        ||||||| |||||||| ||||| |     |||||||||||||| |    
T  25656626 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaaaaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaa 25656725  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||| ||||||||||||    
T  25656726 ttaattaggattgaacacct 25656745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 29647670 - 29647586
Alignment:
Q  302 ttttatttttagaaaaaa-ttgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||| |||| ||||||||||||||||||  ||| ||  ||||||||| |||||||||  | ||||||||||    
T  29647670 ttttttttttagaaaaaaattgactcatttatttgacatttaacgttgtcaatgtatattatattttgattggttgatatcatga 29647586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 7556891 - 7556926
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  7556891 agtcatgtagtgtaaattaattaagattgaacacct 7556926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 23258950 - 23258891
Alignment:
Q  311 tagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgat 370  Q
    ||||||||||||| |||||||||||| ||||| |||||   |||||||||| ||||||||    
T  23258950 tagaaaaaattgactcatttatttgagatttaatgttacaattgtatattacattttgat 23258891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 12769565 - 12769633
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| ||||||| |||||||||| |||| ||  ||||||||| |||||||||    
T  12769565 ttttttttatagaaaaaattgactcattta-ttgacatttaatgttgtcaatgtatattacattttgatt 12769633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 30302153 - 30302120
Alignment:
Q  218 tcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| |||||||||||||||||||||    
T  30302153 tcatgtagtgtaaattaattaagattgaacacct 30302120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 42159478 - 42159421
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||| ||| |||||||||||||||||| | |||  ||||||||||| |||||||||    
T  42159478 aaaaaaatgactcatttatttgacatttaatattacatttgtatattacattttgatt 42159421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 48128597 - 48128630
Alignment:
Q  218 tcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||| |||||||||||||||||||||    
T  48128597 tcatgtagtgtaaattaattaagattgaacacct 48128630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 11757105 - 11757161
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||| ||||| ||||   ||||||||||| |||||||||    
T  11757105 aaaaattgactcatttatttgagatttaatgttgcatttgtatattacattttgatt 11757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 30301126 - 30301086
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacattta 342  Q
    |||| ||||| ||||||||||| ||||||||||||||||||    
T  30301126 tttttttttttgaaaaaattgactcatttatttgacattta 30301086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 35956246 - 35956327
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| |||||||  || |||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  35956246 ttttttttttagaaaaaattgactcattta--tggcatttaatgttgtcaatgtatattatattttgattggttgatatcatga 35956327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 88; Significance: 4e-42; HSPs: 4)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 5586 - 5738
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||        ||||||||    
T  5586 gatatgtttttgttctcacgttaggggttttagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaaatttgatgta 5685  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  5686 aaattttatttgttataagtcttgtagtgtaaattaaataagattgaacacct 5738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 371
Target Start/End: Original strand, 5810 - 5893
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||    
T  5810 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgatt 5893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 3987 - 3906
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| ||||||||| || ||||||||||    
T  3987 ttttttttttagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattgattgatatcatga 3906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 5062 - 4943
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| | || ||||||||||||| ||||||       || ||||| |||| ||| ||||| ||     ||||||||||||| |    
T  5062 gaagaaattttatgaatgtaactaataaatttaagaacattcagatgaaagaaatttgatgtgaaatcttaattgttttaagctagtcatgtagtgtaaa 4963  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  4962 ttaattaagattgaacacct 4943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 104 - 242
Target Start/End: Complemental strand, 56527 - 56387
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnt-tgatgtaaaa 202  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||       | ||||||||||    
T  56527 atgtttttgttctcaagttcggggttttggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatatgatgtaaaa 56428  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    ||||||||||||| |||| ||||||||| ||||||||||||    
T  56427 ttttatttgttataagtcttgtagtgtaaattaattaagat 56387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 56335 - 56273
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtt 347  Q
    ||||||||||||||||||||||||||||||||   || |||| |||||||||||||||||| ||||    
T  56335 ctaatgattaagattaactcttttatttttag---aagttgactcatttatttgacatttaatgtt 56273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 39774922 - 39775060
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttgatgtaaaat 203  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||    
T  39774922 atgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatg-aaaaatttgatgtaaaat 39775020  T
Q  204 tttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    |||||||||||| |||| || |||||| ||||||||||||    
T  39775021 tttatttgttataagtcttgcagtgtaaattaattaagat 39775060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 2292120 - 2292269
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  2292120 atgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaactgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 2292219  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||| |||| |||| ||| ||||| |||||||||||||||||||||    
T  2292220 ttttatttattataagtcttgtggtgtaaattaattaagattgaacacct 2292269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 37725321 - 37725470
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        || ||||||||    
T  37725321 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttaatgtaaaa 37725420  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  37725421 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 37725470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 104 - 238
Target Start/End: Original strand, 3851545 - 3851681
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  3851545 atgtttttgttctcacgttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaataaatttgatgtaaaa 3851644  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaatta 238  Q
    ||||||||||||| |||| ||||||||| ||||||||    
T  3851645 ttttatttgttataagtcttgtagtgtaaattaatta 3851681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 4738058 - 4738207
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||        |||||||||||    
T  4738058 atgtttttgttctcacgttcgaggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaatgaaagaaatttgatgtaaaa 4738157  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  4738158 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 4738207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 15152787 - 15152638
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||        |||||||||||    
T  15152787 atgtttttgttctcacgttcggggttctggaatagaagaaattttatgaatgtaaatgatgaatttaaggacatcctgatgaaagaaatttgatgtaaaa 15152688  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  15152687 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 15152638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 27551416 - 27551565
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagat-gnnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||  | |||||||| |       |||||||||||    
T  27551416 atgtttttgttctcacgttcggggttttagagtggaagaaattttatgaatgtaagtgatgaatttaaagagatccagatggaaaaaatttgatgtaaaa 27551515  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  27551516 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 27551565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 42080618 - 42080758
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  42080618 atgtttttgttctcatgttcggggttttgaaatgaaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaagtttgatgtaaaa 42080717  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    ||||||||||||| |||| ||||||||| ||||||||||||    
T  42080718 ttttatttgttataagtcttgtagtgtaaattaattaagat 42080758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 3906711 - 3906860
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||| ||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||| ||||||        |||||||||||    
T  3906711 atgtttttgttttcacgttcggggttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaagaaatttgatgtaaaa 3906810  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  3906811 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 3906860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 15399197 - 15399048
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    |||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||        |||||||||||    
T  15399197 atgtttttgttctcacattcggggttctggaatggaagaagttttatgaatgtaagtgatgaatttaaggacatccagttgaaagaaatttgatgtaaaa 15399098  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  15399097 ttttatttgttataagtcttgtggtgtaaattaattaagattgaacacct 15399048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 25223688 - 25223539
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||        |||||||||||    
T  25223688 atgtttttgttctcacgttcggggttctggaatcgaagaaattttataaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 25223589  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  25223588 ttttatttgttataagtcttgtagagtaaattaattaagattgaacacct 25223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 3754702 - 3754842
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||        |||||||||||    
T  3754702 atgtttttgttctcacgttcgggattttggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatcgagatgaaagaaatttgatgtaaaa 3754801  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    ||||||||||||| |||  ||||||||| ||||||||||||    
T  3754802 ttttatttgttataagttttgtagtgtaaattaattaagat 3754842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 6644874 - 6644737
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  6644874 atgtttttgttctcacgttcggggttccggaattgaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 6644775  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaa 239  Q
    ||||||||||||| |||| ||||||||| |||||||||    
T  6644774 ttttatttgttataagtcttgtagtgtaaattaattaa 6644737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 77422 - 77559
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||| ||| |||||||| |||||||| ||||||||||||| |||||||||||        |||||||||||    
T  77422 atgtttttgttctcacgttcggggttctggaatagaaaaaattttacgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 77521  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaa 239  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  77522 ttttatttgttataagtcatgtagtgtaaattaattaa 77559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 38282080 - 38282193
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  38282080 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 38282179  T
Q  203 ttttatttgttata 216  Q
    ||||||||||||||    
T  38282180 ttttatttgttata 38282193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 371
Target Start/End: Complemental strand, 6644683 - 6644597
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||||    
T  6644683 atgattaagattaactcttttatttttagaaaaaattgactcatttatttgacatttaatgttgtctatgtatattacattttgatt 6644597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 38282332 - 38282429
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||||||| || ||||||||||    
T  38282332 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattgattgatatcatga 38282429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 39966978 - 39967058
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  39966978 atgtttttgttctcaagttcggggttctggaattgaagaaattttatgaatgtaaatgatgaatttaaggacattcagatg 39967058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 77668 - 77765
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||||    
T  77668 attaagattaactcttttattttttgaaaaaatctactcatttatttgacatttaatgttatctatgtatattacattttgattcgttgatatcatga 77765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 3851737 - 3851802
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtt 347  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  3851737 ctaatgattaagattaactcttttatttttagaaaaaattgagtcatttatttgacatttaatgtt 3851802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 28391872 - 28391969
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||||||||||| ||||| || ||||||||| ||||||||| || ||||||||||    
T  28391872 attaagattaactcttttattttttgaaaaaatctactcatttatttgacatttattgttacctatgtatattacattttgattgattgatatcatga 28391969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 14005921 - 14006030
Alignment:
Q  142 aaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-gtcatgtagtgtagattaattaa 239  Q
    ||||||||||||||||| ||||||||||||| |||||||||||       || ||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  14005921 aaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaattttatttgttataagtcttgtagtgtaaattaattaa 14006020  T
Q  240 gattgaacac 249  Q
    ||||||||||    
T  14006021 gattgaacac 14006030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 3906969 - 3907071
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||  | |||||||    
T  3906969 taattattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgattggttgatatca 3907068  T
Q  383 tga 385  Q
    |||    
T  3907069 tga 3907071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 39775112 - 39775217
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtt--atctttgtatattaaattttgattaatagata 379  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||||  || | ||||||||| |||||||||  | ||||    
T  39775112 ctaatgattaagattaactcttttatttttagaaaaaatggactcatttatttgatatttaatgttgcatatgtgtatattacattttgattggttgata 39775211  T
Q  380 tcatga 385  Q
    ||||||    
T  39775212 tcatga 39775217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 42080810 - 42080915
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgtt--atctttgtatattaaattttgattaatagata 379  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||   | | ||||||||| |||||||||  | ||||    
T  42080810 ctaatgattaagattaactcttttatttttagaaaaaatttactcatttatttgacatttaatgttgcctatatgtatattacattttgattggttgata 42080909  T
Q  380 tcatga 385  Q
    ||||||    
T  42080910 tcatga 42080915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 15152515 - 15152431
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| || ||||||||| |||||||||    
T  15152515 gattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattacctatgtatattacattttgatt 15152431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 15398951 - 15398870
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttg 368  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| ||||||    
T  15398951 gattaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttg 15398870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 28391621 - 28391770
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||  |     |||||||||||||||||||||||||||| | |||||||||       || |||||||||    
T  28391621 atgtttttgttctcacgttcggggttctggaataaatttttttttatgaatgtaagtgatgaatttaaggagatccagatgaaagaaatttgatgtaaaa 28391720  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| ||||| |||| || |||||||||||||    
T  28391721 ttttatttgttataagtcttgtggtgtaaattagtttagattgaacacct 28391770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 1054778 - 1054857
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaatttt 367  Q
    ||||| |||||||| ||||||||||||||||||| | |||||||||||||||||| ||||| || ||||||||| |||||    
T  1054778 attaaaattaactcatttatttttagaaaaaatttactcatttatttgacatttaatgttacctatgtatattacatttt 1054857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 3767810 - 3767869
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacattta 342  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  3767810 taatgattaagattaacttttttatttttagaaaaaattgactcatttatttgacgttta 3767869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 37725989 - 37726086
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||| |||||||||||||||||||||  | |||||||||||||||||| | |||  | ||||||||| |||||||||  | ||||||||||    
T  37725989 attaagattaattcttttatttttagaaaaaatctactcatttatttgacatttaatattagttatgtatattacattttgatttgttgatatcatga 37726086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 381
Target Start/End: Original strand, 20919887 - 20919966
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    |||||||| ||||||| ||||| |||||||||||||||||| |||||  ||||||||||| |||||||||| | ||||||    
T  20919887 ttttatttatagaaaatattgactcatttatttgacatttaatgttacatttgtatattacattttgattagttgatatc 20919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 14006114 - 14006216
Alignment:
Q  283 taatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatca 382  Q
    |||| |||||||||||||||||||||||||||||||||  | ||||||| |||| ||||| |||||  | | ||||||| |||||||||  | |||||||    
T  14006114 taataattaagattaactcttttatttttagaaaaaatctactcatttaattgaaatttaatgttacatatatatattacattttgattggttgatatca 14006213  T
Q  383 tga 385  Q
    |||    
T  14006214 tga 14006216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 2292410 - 2292495
Alignment:
Q  287 gattaagattaactctttt-atttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||| |||||||||||| |||||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||    
T  2292410 gattaaaattaactctttttatttttagaaaaaatctactcatttatttgacatttaatgttacttatgtatattacattttgatt 2292495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 27479081 - 27479150
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  27479081 ttttttttatagaaaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 27479150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 39879927 - 39879992
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatat 380  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||| || |||||    
T  39879927 aaaaattgactcatttatttgacatttaatgttatatttgtatattacattttgattgattgatat 39879992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 6319401 - 6319345
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||    
T  6319401 aaaaattgactcatttatttgacatttaatgttatatttgtatattacattttgatt 6319345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 33182802 - 33182858
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  |||||||||||||||||||||    
T  33182802 aaaaattgactcatttatttgacatttaatgttacatttgtatattaaattttgatt 33182858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 518168 - 518089
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    |||||||| ||||||| ||||| |||||||||||||||||| | |||  ||||||||||| ||||||||| || ||||||    
T  518168 ttttatttatagaaaatattgactcatttatttgacatttaatattacatttgtatattacattttgattgattgatatc 518089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 24460736 - 24460805
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||| | |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  24460736 ttttttttatagaaaaaatttactcatttatttgacatttaatgttacatttgtatattacattttgatt 24460805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 18248617 - 18248673
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  18248617 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 18248673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 25223441 - 25223369
Alignment:
Q  299 ctcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||  | |||||||||||| ||||| || || || ||||||||| |||||||||    
T  25223441 ctcttttatttttagaaaaaatctactcatttatttgatatttaatgctacctatgtatattacattttgatt 25223369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 39159960 - 39159904
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  39159960 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 39159904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 39209234 - 39209290
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  39209234 aaaaattgactcatttatttgacatttaatgttacatttgtatattacattttgatt 39209290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 4738324 - 4738416
Alignment:
Q  287 gattaagattaactcttttatttttagaaa--------aaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||| ||||||||||||||        ||||  | |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  4738324 gattaagattaactcctttatttttagaaagaaaaaaaaaatgtactcatttatttgacatttaatgttatctatgtatattacattttgatt 4738416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 15399779 - 15399898
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  15399779 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaaaaaatttgatgtgaaattttaattgttctaagccagtcatgtagtgtaaa 15399878  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  15399879 ttaattaagattgaacacct 15399898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 383
Target Start/End: Complemental strand, 27549804 - 27549725
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcat 383  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||| | ||||||||    
T  27549804 ttttctttttagaaaaaattgactcattta--tgacatttaatgttttcgatgtatattacattttgattagttgatatcat 27549725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 18246555 - 18246498
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||| | |||||||||    
T  18246555 aaaaaattgactcatttatttgacatttaatgttacatttgtatatcacattttgatt 18246498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 20919207 - 20919142
Alignment:
Q  317 aaattgattcatttatttgacatttactgttat-ctttgtatattaaattttgattaatagatatc 381  Q
    ||||||| |||||||||||||||||| ||||||  ||||||||||| ||||||||| || ||||||    
T  20919207 aaattgactcatttatttgacatttaatgttatattttgtatattacattttgattgattgatatc 20919142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 21191804 - 21191861
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||||  |||||||||    
T  21191804 aaaaaattgagtcatttatttgacatttaatgttacatttgtatattgcattttgatt 21191861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 14452167 - 14452111
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| | |||  ||||||||||| |||||||||    
T  14452167 aaaaattgactcatttatttgacatttaattttacatttgtatattacattttgatt 14452111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 15400866 - 15400947
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||||||||||||||||| |||||||  ||||||||| |||| ||  ||||||||| |||||||||  | ||||||||||    
T  15400866 ttttttttttagaaaaaattgactcattta--tgacatttaatgttgtcaatgtatattacattttgattggttgatatcatga 15400947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 33178823 - 33178767
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  33178823 aaaatttgactcatttatttgacatttaatgttacatttgtatattacattttgatt 33178767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 76881 - 76763
Alignment:
Q  137 ggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttat---agtcatgtagtgtagat 232  Q
    |||| ||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||| |   |||| ||||||||| ||    
T  76881 ggaataaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttctgccagtcctgtagtgtaaat 76782  T
Q  233 taattaagattgaacacct 251  Q
    |||||||||||||||||||    
T  76781 taattaagattgaacacct 76763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 3850960 - 3850925
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  3850960 agtcatgtagtgtaaattaattaagattgaacacct 3850925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 6647205 - 6647291
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||| ||| | | |||| ||| ||||||||||||| |||||||||||||||||| | || ||  | ||||||| |||||||||    
T  6647205 atgattaaaattgatttttttttttatagaaaaaattgactcatttatttgacatttaatattgtcaatatatattacattttgatt 6647291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 27550858 - 27550812
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg 184  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||    
T  27550858 gaagaaattttatgaatgtaactgataaatttaaggacattcagatg 27550812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 15153438 - 15153471
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacac 249  Q
    |||||||||||||| |||||||||||||||||||    
T  15153438 agtcatgtagtgtaaattaattaagattgaacac 15153471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 24520432 - 24520497
Alignment:
Q  316 aaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||||  ||||||||||||||| |||||  ||||||||| | |||||||||| | ||||||    
T  24520432 aaaattgatttttttatttgacatttaatgttacatttgtatatcatattttgattagttgatatc 24520497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 6322374 - 6322430
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| |||| |||||||||||||||||| |||||  ||| ||||||| |||||||||    
T  6322374 aaaatttgactcatttatttgacatttaatgttacatttatatattatattttgatt 6322430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 21178503 - 21178571
Alignment:
Q  314 aaaaaattgattcatttatttgacatttactgtta-tctttgtatattaaattttgattaatagatatc 381  Q
    |||||||||| |||||||||||||||||| | |||   ||||||||||| |||||||||| | ||||||    
T  21178503 aaaaaattgactcatttatttgacatttaatattacattttgtatattacattttgattagttgatatc 21178571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 36602977 - 36603021
Alignment:
Q  327 atttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||| |||||  ||||||||||| |||||||||    
T  36602977 atttatttgacatttaatgttacatttgtatattacattttgatt 36603021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 14104197 - 14104048
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||        |||||||||||    
T  14104197 atgtttttgttctcacgttcggggttctggaatgaaagaaattttatgaaagtaaatgatgaatttaagaacatccagatgaaagaaatttgatgtaaaa 14104098  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  14104097 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 14104048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 17550697 - 17550846
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  17550697 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 17550796  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||| || |||| ||||||||| |||||||||||||||||||||    
T  17550797 ttttatttgtcataagtcttgtagtgtaaattaattaagattgaacacct 17550846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 955455 - 955604
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||        |||||||||||    
T  955455 atgtttttgttctcacgttcggggttctggaatgtaagaaattttatgaatataaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 955554  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  955555 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 955604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 4589691 - 4589840
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |        |||||||||||    
T  4589691 atgtttttgttctcacgttcgaggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagaagaaagaaatttgatgtaaaa 4589790  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  4589791 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 4589840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 11154489 - 11154638
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  11154489 atgtttttgttctcacgttcggtgttctggaatcgaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 11154588  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  11154589 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 11154638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 11837457 - 11837606
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||| |||||        |||||||||||    
T  11837457 atgtttttgttctcacgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaatgacatctagatgaaagaaatttgatgtaaaa 11837556  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  11837557 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 11837606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 16918602 - 16918453
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||        |||||||||||    
T  16918602 atgtttttgttcttatgttcggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 16918503  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  16918502 ttttatttgttataagtcttgtagtgtaaattaattaaaattgaacacct 16918453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 28578814 - 28578665
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||        |||||||||||    
T  28578814 atgtttttgttctcaagctcggggttctgaaatggaagaaatgttatgaatgtaagtgatgaatttaaggacatccagatgaaaaaaatttgatgtaaaa 28578715  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| |||| |||| |||||||||||||||||||||    
T  28578714 ttttatttgttataagtcttgtattgtaaattaattaagattgaacacct 28578665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 21861135 - 21861275
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||        |||||||| ||    
T  21861135 atgtttttgttctcaagttcggggttttggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaagaaatttgatgtataa 21861234  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagat 242  Q
    ||||||||||||| |||| ||| ||||| ||||||||||||    
T  21861235 ttttatttgttataagtcttgttgtgtaaattaattaagat 21861275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 27782674 - 27782525
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||| | ||||  |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||        |||||||||||    
T  27782674 atgtttttgttcttacgttcatggttctggaatggaagaaattttatgaatgtaaatgatgaatttaagaacatccagatgaaagaaatttgatgtaaaa 27782575  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||||||    
T  27782574 ttttatttgttataagttttgtagtgtaaattaattaagattgaacacct 27782525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 24083329 - 24083180
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaa 202  Q
    ||||||||||||||| |||| || || |  |||| |||||||||||||||||||||||||||||||||| |||| ||||||       || |||||||||    
T  24083329 atgtttttgttctcatgttcaggattctcaaatgaaagaaattttatgaatgtaagtgatgaatttaaggacattcagatgaaagaaatttgatgtaaaa 24083230  T
Q  203 ttttatttgttata-gtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  24083229 ttttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 24083180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 24083137 - 24083037
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  || ||||||||| ||| |||||  | |||||||||    
T  24083137 atgattaagattaacttttttatttttagaaaaaattgattcatttatttgacatttaatgttgcctatgtatattacattatgattggttgatatcatg 24083038  T
Q  385 a 385  Q
    |    
T  24083037 a 24083037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 25109746 - 25109598
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||  ||||| |||||||||||||||||||||||||  | ||||||||||||| |||||||||||        |||||||||||    
T  25109746 atgtttttgttctcacgtttagggttctggaatggaagaaattttatgaatg-cattgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 25109648  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| ||| || || |||||||||||||||||||||    
T  25109647 ttttatttgttataagtcttgtggtttaaattaattaagattgaacacct 25109598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 14103928 - 14103845
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||| ||||||||| |||||||||    
T  14103928 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttatctatgtatattacattttgatt 14103845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 23580483 - 23580335
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||| ||||| ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||        |||||||||||    
T  23580483 atgtttttgttctcacgttcagggttctggaatgaaagaaattgtatggatgtaaatgatgaatttaaggacatccagatgaaagaaatttgatgtaaaa 23580384  T
Q  203 ttttatttgttatagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||   || | ||||||||| ||||||||||| |||||||||    
T  23580383 ttttatttgtataagccttgtagtgtaaattaattaagagtgaacacct 23580335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 11154751 - 11154848
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| | |||||| ||||||||| |||||||||  | ||||||||||    
T  11154751 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattatctatgtatattacattttgattggttgatatcatga 11154848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 11837715 - 11837812
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  11837715 attaagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 11837812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 27438577 - 27438455
Alignment:
Q  131 tggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-agtcatgtagtgt 228  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| | |        |||||||||||||||||||||||| |||| ||||||||    
T  27438577 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaacgaaagaaatttgatgtaaaattttatttgttataagtcttgtagtgt 27438478  T
Q  229 agattaattaagattgaacacct 251  Q
    |  ||||||||||||||||||||    
T  27438477 aagttaattaagattgaacacct 27438455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 4589939 - 4590036
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||| |||||||  ||| |||||||||||||||| ||||| || ||||||||| |||| |||| || ||||||||||    
T  4589939 attaagattaactcttttatttttaaaaaaaatctatttatttatttgacatttaatgttacctatgtatattacatttggattgattgatatcatga 4590036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 23580222 - 23580125
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||| |||||||||||||||||||||  | |||||||||||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  23580222 attaagattaattcttttatttttagaaaaaatctactcatttatttgacatttaatgttacctatgtatattacattttgattggttgatatcatga 23580125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 27782400 - 27782306
Alignment:
Q  291 aagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| || ||||||||| |||||||||  | ||||||||||    
T  27782400 aagattaactcttttatttttagaaaaaatctactcatttatttgacatttaatattacctatgtatattacattttgattggttgatatcatga 27782306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 955712 - 955796
Alignment:
Q  287 gattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||||||||| |||||||||||||||||||  | |||||||||||||||||| ||||| || | ||||||| |||||||||    
T  955712 gattaagattaactattttatttttagaaaaaatctactcatttatttgacatttaatgttacctatatatattacattttgatt 955796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 21861327 - 21861413
Alignment:
Q  282 ctaatgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||||||||||||||||||   ||||| | |||||||||||||||||| |||| | | ||||||||| |||||||||    
T  21861327 ctaatgattaagattaactcttttatttttag---aaattaactcatttatttgacatttaatgttgtatgtgtatattacattttgatt 21861413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 17550945 - 17551042
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||||||| |||||||||||||||||||| |||  | |||||||| ||||||||| ||||| || ||||||||| |||||||||  | ||||||||||    
T  17550945 attaagatcaactcttttatttttagaaataatctactcatttatctgacatttaatgttacctatgtatattacattttgattggttgatatcatga 17551042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 385
Target Start/End: Complemental strand, 16918385 - 16918285
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    |||||||| ||||||||||||||||| |||||||||| | | ||||||||||| |||| |||||  | ||||||||| |||||||||| | || ||||||    
T  16918385 atgattaatattaactcttttattttaagaaaaaatttacttatttatttgacttttaatgttacttatgtatattacattttgattagttgaaatcatg 16918286  T
Q  385 a 385  Q
    |    
T  16918285 a 16918285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 15287585 - 15287502
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||||  ||||||||| |||||||||  | ||||||||||    
T  15287585 ttttttttatagaaaaaattgactcatttatttgacatttaatgttatcaatgtatattacattttgattggttgatatcatga 15287502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 385
Target Start/End: Complemental strand, 25109491 - 25109392
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttg--tatattaaattttgattaatagatatcatga 385  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||||  |||| ||||| || ||  ||||||| |||||||||  | ||||||||||    
T  25109491 attaagattaactcttttatttttagaaaaaatctactcatttatttgatgtttaatgttacctatgtatatattacattttgattggttgatatcatga 25109392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 28578560 - 28578478
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||||||||||| | |||||||||||||  | |||||||||||||||||| |||||  | ||||||||| |||||||||    
T  28578560 attaagattaactcttt-agttttagaaaaaatctactcatttatttgacatttaatgttacatatgtatattacattttgatt 28578478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 12783105 - 12783039
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttg 368  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||||    
T  12783105 ttttttttatagaaaaaattgactcatttatttgacatttaatgttacatttgtatattacattttg 12783039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 5090307 - 5090376
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| |||||||||    
T  5090307 ttttttttatagaaaaaattgactcatttatttgacatttaatgttacatttgtttattacattttgatt 5090376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 13866141 - 13866072
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||| ||| ||||||||||||| | |||||||||||||||| |||||  ||||||||||| |||||||||    
T  13866141 ttttttttatagaaaaaattgactaatttatttgacatttaatgttacatttgtatattacattttgatt 13866072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 32562644 - 32562700
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||| |||||||||    
T  32562644 aaaaattgactcatttatttgacatttaatgttacatttgtatattatattttgatt 32562700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 27440762 - 27440797
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  27440762 agtcatgtagtgtagattaattaagattgaacacct 27440797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 15288355 - 15288236
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnnttg-atgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| ||||||||||||| || |||       ||  |||| |||||||| ||||| ||     ||||||||||||| |    
T  15288355 gaagaaattttatgaatgtaactgataaatttaagaacattcaaatgaaagaaattttatgtgaaattttaattgttctaagccagtcatgtagtgtata 15288256  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  15288255 ttaattaagattgaacacct 15288236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 24083887 - 24084006
Alignment:
Q  138 gaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtaga 231  Q
    ||||||||||||||||||||| |||| |||||||| |||| || |||       || ||||| |||||||| ||||| ||     ||||||||||||| |    
T  24083887 gaagaaattttatgaatgtaattgataaatttaaggacattcaaatgaaacaaatttgatgtgaaattttaattgttctaagtcagtcatgtagtgtaaa 24083986  T
Q  232 ttaattaagattgaacacct 251  Q
    ||||||||||||||||||||    
T  24083987 ttaattaagattgaacacct 24084006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 23573922 - 23573958
Alignment:
Q  215 tagtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23573922 tagtcatgtagtgtaaattaattaagattgaacacct 23573958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 24159103 - 24159047
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |||||||||||||||||| |||||   |||||||||| |||||||||    
T  24159103 aaaaattgactcatttatttgacatttaatgttacaattgtatattatattttgatt 24159047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 954793 - 954758
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  954793 agtcatgtagtgtaaattaattaagattgaacacct 954758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 25119555 - 25119590
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  25119555 agtcatgtagtgtaaattaattaagattgaacacct 25119590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 27783325 - 27783360
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||| |||||||||||||||||||||    
T  27783325 agtcatgtagtgtaaattaattaagattgaacacct 27783360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 32562528 - 32562581
Alignment:
Q  192 ttgatgtaaaattttatttgttata-gtcatgtagtgtagattaattaagattg 244  Q
    ||||||| |||||||| |||||||| | ||| ||||||||||||||||||||||    
T  32562528 ttgatgtcaaattttaattgttataagccatatagtgtagattaattaagattg 32562581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 5088697 - 5088641
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    ||||||||| |  ||||||||||||||| |||||  ||||||||||| |||||||||    
T  5088697 aaaaattgacttctttatttgacatttaatgttacatttgtatattacattttgatt 5088641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 385
Target Start/End: Complemental strand, 27438346 - 27438252
Alignment:
Q  289 ttaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| |||||| |||||||||| |||||||||  | |||||||||||||||||| || || |  ||||||||| |||||||||  | ||||||||||    
T  27438346 ttaaaattaacacttttatttt-agaaaaaatctactcatttatttgacatttaatg-tacccatgtatattacattttgattggttgatatcatga 27438252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 21113 - 20962
Alignment:
Q  101 gatatgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgta 199  Q
    ||||| ||||| ||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||| |||||| | ||        ||||||||    
T  21113 gatatattttttttctcaagttcagggttctggaatggaaaaaattttatgaatgtaaatgatgaatttaaggacatcc-gttgaaataaatttgatgta 21015  T
Q  200 aaattttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  21014 aaattttatttgttataagtcttgtagtgtaaattaattaagattgaacacct 20962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 20859 - 20777
Alignment:
Q  288 attaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgatt 371  Q
    |||||||| |||||||||||||| |||||||||  | |||||||||||||||||| | |||  | ||||||||| |||||||||    
T  20859 attaagatcaactcttttatttt-agaaaaaatctactcatttatttgacatttaatattacttatgtatattacattttgatt 20777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 22764 - 22884
Alignment:
Q  137 ggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatgnnnnnnntt-gatgtaaaattttatttgttata-----gtcatgtagtgtag 230  Q
    |||| ||||||||||||| ||| |||| |||||||| |||| ||||||       || ||||| |||||||| ||||||||     ||||||||||| |     
T  22764 ggaataaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgatgtgaaattttaattgttataagccagtcatgtagtgaaa 22863  T
Q  231 attaattaagattgaacacct 251  Q
    |||||||||||||||||||||    
T  22864 attaattaagattgaacacct 22884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 5886 - 6035
Alignment:
Q  104 atgtttttgttctcaagttcggggttttggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaa 202  Q
    ||||||||||||||| |||||||||| | |||||||||||| ||||||||||||| ||||||||||| | | |||||||||        |||||||||||    
T  5886 atgtttttgttctcatgttcggggttctagaatggaagaaagtttatgaatgtaaatgatgaatttagggaaatccagatgaaagaaatttgatgtaaaa 5985  T
Q  203 ttttatttgttat-agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||| |||| || |||||| ||||||||||||| |||||||    
T  5986 ttttatttgttataagtcttgcagtgtaaattaattaagattaaacacct 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 6078 - 6178
Alignment:
Q  285 atgattaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatg 384  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||  || |||||||||||||||||||  | |||||||||    
T  6078 atgattaagattaactcttttatttttggaaaaaattgactcatttatttgacatttaatgttgcctatgtatattaaattttgattggttgatatcatg 6177  T
Q  385 a 385  Q
    |    
T  6178 a 6178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 251
Target Start/End: Original strand, 48785 - 48907
Alignment:
Q  131 tggaatggaagaaattttatgaatgtaagtgatgaatttaagaacatccagatg-nnnnnnnttgatgtaaaattttatttgttat-agtcatgtagtgt 228  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| | |        |||||||||||||||||||||||| |||| ||||||||    
T  48785 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaacgaaagaaatttgatgtaaaattttatttgttataagtcttgtagtgt 48884  T
Q  229 agattaattaagattgaacacct 251  Q
    |  ||||||||||||||||||||    
T  48885 aagttaattaagattgaacacct 48907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 46599 - 46564
Alignment:
Q  216 agtcatgtagtgtagattaattaagattgaacacct 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  46599 agtcatgtagtgtagattaattaagattgaacacct 46564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 385
Target Start/End: Original strand, 49016 - 49110
Alignment:
Q  289 ttaagattaactcttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatcatga 385  Q
    |||| |||||| |||||||||| |||||||||  | |||||||||||||||||| || || |  ||||||||| |||||||||  | ||||||||||    
T  49016 ttaaaattaacacttttatttt-agaaaaaatctactcatttatttgacatttaatg-tacccatgtatattacattttgattggttgatatcatga 49110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 94640 - 94706
Alignment:
Q  315 aaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    ||||||||| |||||||||||||||||| | |||  ||||||||||| ||||||||| || ||||||    
T  94640 aaaaattgactcatttatttgacatttaatattacatttgtatattacattttgattgattgatatc 94706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 381
Target Start/End: Original strand, 71773 - 71852
Alignment:
Q  302 ttttatttttagaaaaaattgattcatttatttgacatttactgttatctttgtatattaaattttgattaatagatatc 381  Q
    |||| ||| ||||||||||||| |||||||||||| ||||| |||||   || ||||||| ||||||||| || ||||||    
T  71773 ttttttttatagaaaaaattgactcatttatttgaaatttaatgttacaattttatattacattttgattgattgatatc 71852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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