View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16091_low_66 (Length: 378)

Name: NF16091_low_66
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16091_low_66
NF16091_low_66
[»] chr6 (61 HSPs)
chr6 (189-286)||(31555830-31555927)
chr6 (1-58)||(6598543-6598600)
chr6 (1-58)||(6605499-6605556)
chr6 (1-58)||(9893042-9893099)
chr6 (1-58)||(15448464-15448521)
chr6 (1-58)||(24661012-24661069)
chr6 (1-58)||(26224507-26224564)
chr6 (1-58)||(28364990-28365047)
chr6 (1-58)||(30833963-30834020)
chr6 (1-55)||(22579355-22579409)
chr6 (1-58)||(495630-495687)
chr6 (1-58)||(1939245-1939302)
chr6 (1-58)||(5360488-5360545)
chr6 (1-58)||(15364461-15364518)
chr6 (1-58)||(16250805-16250862)
chr6 (1-58)||(20182224-20182281)
chr6 (2-59)||(21141019-21141076)
chr6 (1-58)||(21990178-21990234)
chr6 (1-58)||(22153710-22153767)
chr6 (1-58)||(25398081-25398138)
chr6 (1-56)||(12200773-12200828)
chr6 (3-58)||(15961410-15961465)
chr6 (1-58)||(2669388-2669445)
chr6 (1-58)||(5250218-5250275)
chr6 (1-58)||(11049754-11049811)
chr6 (1-58)||(12160850-12160907)
chr6 (1-54)||(15509235-15509288)
chr6 (191-269)||(9350930-9351009)
chr6 (1-55)||(5192195-5192249)
chr6 (1-51)||(6978356-6978406)
chr6 (1-58)||(10458843-10458900)
chr6 (5-58)||(17919619-17919672)
chr6 (1-58)||(27796837-27796894)
chr6 (1-58)||(28668179-28668236)
chr6 (1-58)||(33250711-33250768)
chr6 (1-52)||(12499295-12499346)
chr6 (1-52)||(12506624-12506675)
chr6 (1-52)||(12509555-12509606)
chr6 (1-56)||(18492448-18492503)
chr6 (1-58)||(2992694-2992751)
chr6 (1-61)||(11077728-11077788)
chr6 (7-58)||(9885328-9885379)
chr6 (62-125)||(31555990-31556052)
chr6 (7-57)||(12157380-12157430)
chr6 (1-55)||(13251385-13251439)
chr6 (1-51)||(22055622-22055672)
chr6 (1-58)||(12351589-12351646)
chr6 (1-58)||(22083917-22083974)
chr6 (1-58)||(26939666-26939723)
chr6 (7-51)||(6065522-6065566)
chr6 (7-58)||(8844171-8844222)
chr6 (194-233)||(33960079-33960118)
chr6 (191-233)||(6337860-6337902)
chr6 (191-237)||(6938183-6938229)
chr6 (5-55)||(20692817-20692867)
chr6 (1-54)||(9060169-9060222)
chr6 (1-58)||(12951787-12951844)
chr6 (1-54)||(14886640-14886693)
chr6 (1-58)||(18048867-18048924)
chr6 (26-55)||(33191184-33191213)
chr6 (5-57)||(1954963-1955015)
[»] chr1 (62 HSPs)
chr1 (191-267)||(2501707-2501783)
chr1 (1-58)||(9109978-9110035)
chr1 (1-58)||(28229458-28229515)
chr1 (1-58)||(46790079-46790136)
chr1 (1-58)||(6412056-6412113)
chr1 (1-58)||(6459296-6459353)
chr1 (1-58)||(8940997-8941054)
chr1 (1-58)||(12720888-12720945)
chr1 (1-58)||(20408163-20408220)
chr1 (1-58)||(45839371-45839428)
chr1 (1-58)||(46339448-46339505)
chr1 (1-58)||(50092301-50092358)
chr1 (1-58)||(51973503-51973560)
chr1 (1-58)||(52183757-52183814)
chr1 (1-61)||(46785958-46786018)
chr1 (1-55)||(4340486-4340540)
chr1 (1-55)||(41120743-41120797)
chr1 (1-58)||(9177179-9177236)
chr1 (1-58)||(12161893-12161950)
chr1 (1-58)||(17200013-17200070)
chr1 (1-54)||(18890556-18890609)
chr1 (1-58)||(22603627-22603684)
chr1 (1-58)||(23457976-23458033)
chr1 (5-58)||(12369954-12370008)
chr1 (1-58)||(7181558-7181615)
chr1 (1-58)||(9985330-9985387)
chr1 (1-58)||(15243164-15243221)
chr1 (1-58)||(19865323-19865380)
chr1 (1-54)||(22158881-22158934)
chr1 (1-58)||(25788000-25788057)
chr1 (1-58)||(29549497-29549554)
chr1 (191-235)||(22580002-22580046)
chr1 (1-56)||(20290326-20290380)
chr1 (1-55)||(17661129-17661183)
chr1 (1-54)||(9464182-9464235)
chr1 (196-233)||(10786355-10786392)
chr1 (1-58)||(27253858-27253915)
chr1 (1-58)||(38531173-38531230)
chr1 (1-58)||(48522597-48522654)
chr1 (1-58)||(50845333-50845390)
chr1 (1-57)||(16913581-16913637)
chr1 (194-257)||(20415106-20415170)
chr1 (6-58)||(41752517-41752569)
chr1 (1-58)||(14760946-14761003)
chr1 (1-58)||(18894903-18894960)
chr1 (1-58)||(46865322-46865379)
chr1 (191-239)||(29512138-29512186)
chr1 (7-51)||(30928388-30928432)
chr1 (192-260)||(32888387-32888455)
chr1 (191-286)||(13796950-13797045)
chr1 (1-44)||(41071852-41071895)
chr1 (212-265)||(2465464-2465518)
chr1 (191-233)||(35949530-35949572)
chr1 (191-233)||(48796673-48796715)
chr1 (1-58)||(7830110-7830167)
chr1 (13-58)||(9259186-9259231)
chr1 (1-58)||(12989931-12989988)
chr1 (1-58)||(13308823-13308880)
chr1 (1-58)||(19081807-19081864)
chr1 (1-58)||(19129695-19129752)
chr1 (1-58)||(29093557-29093614)
chr1 (191-235)||(48662793-48662837)
[»] chr8 (61 HSPs)
chr8 (191-286)||(29528066-29528161)
chr8 (1-58)||(4331055-4331112)
chr8 (1-58)||(8555307-8555364)
chr8 (1-58)||(19240944-19241001)
chr8 (1-58)||(19314128-19314185)
chr8 (1-58)||(19488064-19488121)
chr8 (1-58)||(24193199-24193256)
chr8 (1-58)||(24576027-24576084)
chr8 (1-58)||(27910767-27910824)
chr8 (1-58)||(27957186-27957243)
chr8 (1-58)||(4647758-4647815)
chr8 (1-58)||(9915044-9915101)
chr8 (1-58)||(16061942-16061999)
chr8 (1-58)||(17810375-17810432)
chr8 (1-58)||(25274674-25274731)
chr8 (1-58)||(25655861-25655918)
chr8 (1-58)||(27869315-27869372)
chr8 (1-58)||(32247986-32248043)
chr8 (1-54)||(33652644-33652697)
chr8 (1-55)||(3823210-3823264)
chr8 (1-58)||(8824902-8824959)
chr8 (1-58)||(11938822-11938878)
chr8 (1-58)||(13060934-13060991)
chr8 (1-54)||(18010067-18010120)
chr8 (1-58)||(19256289-19256346)
chr8 (1-58)||(21350555-21350612)
chr8 (1-58)||(22939390-22939447)
chr8 (1-58)||(25000434-25000491)
chr8 (1-58)||(30466957-30467014)
chr8 (1-58)||(30688013-30688070)
chr8 (1-58)||(43431562-43431619)
chr8 (191-262)||(43239317-43239388)
chr8 (191-254)||(43511327-43511390)
chr8 (1-55)||(23752292-23752346)
chr8 (1-58)||(24636729-24636787)
chr8 (1-58)||(29351000-29351058)
chr8 (1-58)||(6817131-6817188)
chr8 (1-58)||(9631481-9631538)
chr8 (1-58)||(32961736-32961793)
chr8 (1-58)||(33412980-33413036)
chr8 (1-58)||(42700660-42700717)
chr8 (2-54)||(14304307-14304359)
chr8 (1-58)||(10917904-10917961)
chr8 (1-58)||(17824619-17824676)
chr8 (1-58)||(21219243-21219300)
chr8 (191-263)||(25178859-25178932)
chr8 (1-58)||(25273331-25273387)
chr8 (1-58)||(31399511-31399568)
chr8 (194-257)||(20216346-20216410)
chr8 (194-257)||(20235944-20236008)
chr8 (194-266)||(42987649-42987721)
chr8 (1-56)||(5670174-5670229)
chr8 (7-58)||(15251684-15251735)
chr8 (7-58)||(29345154-29345205)
chr8 (9-58)||(40289424-40289473)
chr8 (14-56)||(6103760-6103802)
chr8 (1-58)||(6816386-6816443)
chr8 (1-58)||(17103868-17103925)
chr8 (7-55)||(6084252-6084300)
chr8 (191-271)||(7057739-7057819)
chr8 (7-55)||(35678065-35678113)
[»] chr4 (56 HSPs)
chr4 (1-58)||(4627081-4627138)
chr4 (1-58)||(38619924-38619981)
chr4 (191-266)||(8644122-8644197)
chr4 (1-58)||(4586761-4586818)
chr4 (1-58)||(7111949-7112006)
chr4 (1-58)||(22168345-22168402)
chr4 (1-58)||(38645827-38645884)
chr4 (1-52)||(29625402-29625453)
chr4 (1-58)||(5473926-5473983)
chr4 (1-58)||(9238628-9238685)
chr4 (1-58)||(9670482-9670539)
chr4 (1-58)||(19839256-19839313)
chr4 (1-58)||(44783560-44783617)
chr4 (2-58)||(30268991-30269047)
chr4 (2-58)||(30283142-30283198)
chr4 (2-58)||(45091339-45091395)
chr4 (191-266)||(8614690-8614765)
chr4 (1-56)||(37378628-37378683)
chr4 (1-55)||(45532585-45532639)
chr4 (1-58)||(55309215-55309273)
chr4 (5-58)||(13564918-13564971)
chr4 (1-58)||(24682330-24682387)
chr4 (1-58)||(27040028-27040085)
chr4 (1-58)||(32175740-32175797)
chr4 (1-58)||(54539363-54539420)
chr4 (197-268)||(5798393-5798464)
chr4 (1-58)||(2275680-2275738)
chr4 (1-58)||(13028819-13028876)
chr4 (1-54)||(18051916-18051969)
chr4 (1-58)||(18714979-18715036)
chr4 (1-58)||(19680427-19680484)
chr4 (1-54)||(30568006-30568059)
chr4 (1-58)||(42055474-42055531)
chr4 (1-58)||(46286232-46286289)
chr4 (1-55)||(25026634-25026688)
chr4 (191-233)||(27790975-27791017)
chr4 (5-58)||(30420036-30420089)
chr4 (194-257)||(29405771-29405835)
chr4 (1-63)||(1638524-1638586)
chr4 (5-55)||(12072043-12072093)
chr4 (1-55)||(12106059-12106113)
chr4 (1-51)||(25147798-25147848)
chr4 (1-54)||(9239288-9239341)
chr4 (1-58)||(30508064-30508121)
chr4 (1-58)||(33914136-33914193)
chr4 (1-54)||(36689754-36689807)
chr4 (7-54)||(8878966-8879013)
chr4 (7-58)||(22128315-22128366)
chr4 (15-58)||(25225188-25225231)
chr4 (191-266)||(47106516-47106591)
chr4 (191-241)||(2073542-2073592)
chr4 (191-233)||(7262157-7262199)
chr4 (191-233)||(23349317-23349359)
chr4 (3-57)||(38223589-38223643)
chr4 (1-58)||(9913335-9913392)
chr4 (191-235)||(22829883-22829927)
[»] chr2 (45 HSPs)
chr2 (191-276)||(12757897-12757982)
chr2 (1-58)||(12779675-12779732)
chr2 (1-58)||(20065077-20065134)
chr2 (1-58)||(37552302-37552359)
chr2 (1-58)||(41736247-41736304)
chr2 (3-58)||(44723009-44723064)
chr2 (1-54)||(1141611-1141664)
chr2 (1-58)||(7093643-7093700)
chr2 (1-58)||(13788058-13788115)
chr2 (1-58)||(14757124-14757181)
chr2 (1-54)||(15636742-15636795)
chr2 (1-58)||(22140367-22140424)
chr2 (1-58)||(27039911-27039968)
chr2 (1-58)||(28319582-28319639)
chr2 (1-54)||(32300526-32300579)
chr2 (1-58)||(43408514-43408571)
chr2 (5-58)||(44476378-44476431)
chr2 (2-58)||(32185908-32185964)
chr2 (1-58)||(18551256-18551313)
chr2 (1-58)||(21293714-21293771)
chr2 (1-58)||(28841345-28841402)
chr2 (1-56)||(37723997-37724052)
chr2 (1-56)||(38362276-38362331)
chr2 (1-58)||(32009027-32009085)
chr2 (1-58)||(8430371-8430428)
chr2 (5-58)||(23388381-23388434)
chr2 (1-58)||(23857961-23858017)
chr2 (1-58)||(28262439-28262496)
chr2 (1-58)||(13613096-13613153)
chr2 (1-58)||(26243324-26243381)
chr2 (1-58)||(41637693-41637750)
chr2 (1-55)||(12860235-12860289)
chr2 (1-51)||(44366007-44366057)
chr2 (191-260)||(4592098-4592167)
chr2 (13-58)||(26687693-26687738)
chr2 (1-58)||(29749406-29749463)
chr2 (7-58)||(22192260-22192311)
chr2 (7-58)||(37802382-37802433)
chr2 (191-233)||(35005394-35005436)
chr2 (12-58)||(36550921-36550967)
chr2 (7-44)||(9590551-9590588)
chr2 (1-58)||(27327691-27327748)
chr2 (1-58)||(30783413-30783470)
chr2 (191-271)||(667864-667944)
chr2 (6-58)||(40018882-40018934)
[»] scaffold0602 (1 HSPs)
scaffold0602 (191-266)||(5143-5218)
[»] chr3 (81 HSPs)
chr3 (191-286)||(39143996-39144091)
chr3 (191-268)||(14418363-14418440)
chr3 (1-58)||(27449163-27449220)
chr3 (1-58)||(43329766-43329823)
chr3 (1-58)||(48404935-48404992)
chr3 (1-55)||(19269870-19269924)
chr3 (1-55)||(25882645-25882699)
chr3 (1-58)||(5261012-5261069)
chr3 (1-58)||(8110414-8110471)
chr3 (1-58)||(9652653-9652710)
chr3 (1-58)||(11915833-11915890)
chr3 (1-58)||(13921400-13921457)
chr3 (1-58)||(18091550-18091607)
chr3 (1-58)||(18104533-18104590)
chr3 (1-58)||(19223524-19223581)
chr3 (1-58)||(21816796-21816853)
chr3 (1-58)||(26098888-26098945)
chr3 (1-58)||(26390637-26390694)
chr3 (1-52)||(29704041-29704092)
chr3 (1-55)||(29236119-29236173)
chr3 (206-272)||(35203393-35203459)
chr3 (1-58)||(8428246-8428303)
chr3 (1-54)||(8546320-8546373)
chr3 (1-58)||(10941668-10941725)
chr3 (1-58)||(11219213-11219270)
chr3 (1-58)||(13905041-13905098)
chr3 (1-58)||(17762717-17762774)
chr3 (1-54)||(18539879-18539932)
chr3 (1-58)||(19064037-19064094)
chr3 (1-58)||(29956447-29956504)
chr3 (1-58)||(30005602-30005659)
chr3 (1-63)||(1628290-1628352)
chr3 (1-58)||(10803795-10803853)
chr3 (1-58)||(1310962-1311019)
chr3 (1-58)||(1745491-1745547)
chr3 (1-58)||(3461313-3461370)
chr3 (1-54)||(4393357-4393410)
chr3 (1-58)||(6088231-6088288)
chr3 (1-58)||(7623534-7623591)
chr3 (5-58)||(11007686-11007739)
chr3 (1-58)||(11837217-11837274)
chr3 (1-58)||(17269607-17269664)
chr3 (5-58)||(18380103-18380156)
chr3 (1-58)||(21490037-21490094)
chr3 (1-58)||(11085345-11085402)
chr3 (1-58)||(23217211-23217268)
chr3 (1-58)||(23773552-23773609)
chr3 (2-58)||(6447249-6447305)
chr3 (1-45)||(28859666-28859710)
chr3 (7-58)||(5565803-5565854)
chr3 (7-58)||(20761953-20762004)
chr3 (7-58)||(21020146-21020197)
chr3 (1-52)||(29451169-29451220)
chr3 (194-257)||(41410168-41410231)
chr3 (5-58)||(15501554-15501608)
chr3 (6-56)||(26963254-26963304)
chr3 (1-51)||(50665646-50665696)
chr3 (1-58)||(15063995-15064052)
chr3 (1-58)||(19610413-19610470)
chr3 (1-58)||(30219413-30219470)
chr3 (1-58)||(47263268-47263325)
chr3 (3-55)||(8543546-8543597)
chr3 (18-58)||(11386427-11386467)
chr3 (1-55)||(26830447-26830502)
chr3 (7-58)||(27968996-27969047)
chr3 (194-233)||(30247989-30248028)
chr3 (3-58)||(31250165-31250220)
chr3 (7-58)||(46012731-46012782)
chr3 (13-63)||(10772051-10772101)
chr3 (1-51)||(37283598-37283648)
chr3 (191-233)||(50622187-50622229)
chr3 (192-233)||(6083477-6083518)
chr3 (1-58)||(16299936-16299993)
chr3 (191-260)||(22845038-22845107)
chr3 (15-56)||(40287486-40287527)
chr3 (189-257)||(42096652-42096721)
chr3 (1-58)||(46942562-46942619)
chr3 (191-219)||(2150628-2150656)
chr3 (191-235)||(19454918-19454962)
chr3 (7-51)||(21088831-21088875)
chr3 (191-235)||(35688434-35688478)
[»] scaffold0001 (3 HSPs)
scaffold0001 (3-56)||(8115-8168)
scaffold0001 (3-56)||(21847-21900)
scaffold0001 (1-58)||(84382-84439)
[»] chr7 (50 HSPs)
chr7 (1-58)||(3872190-3872247)
chr7 (1-58)||(18217908-18217965)
chr7 (1-58)||(22486473-22486530)
chr7 (1-58)||(23539311-23539368)
chr7 (2-58)||(3904481-3904537)
chr7 (1-55)||(31425517-31425571)
chr7 (1-58)||(1842973-1843030)
chr7 (1-58)||(6849214-6849271)
chr7 (1-58)||(7733315-7733372)
chr7 (1-58)||(11036586-11036643)
chr7 (1-58)||(21917337-21917394)
chr7 (1-58)||(23232118-23232175)
chr7 (1-58)||(23699828-23699885)
chr7 (1-58)||(27806097-27806154)
chr7 (1-58)||(28800957-28801014)
chr7 (194-277)||(4912596-4912679)
chr7 (1-51)||(20174099-20174149)
chr7 (1-58)||(2093365-2093422)
chr7 (5-58)||(9698541-9698594)
chr7 (1-58)||(20429544-20429601)
chr7 (1-58)||(21623100-21623156)
chr7 (1-58)||(23750739-23750796)
chr7 (1-58)||(24605917-24605974)
chr7 (1-58)||(37135288-37135345)
chr7 (1-58)||(47523653-47523710)
chr7 (191-263)||(25309415-25309487)
chr7 (3-58)||(687947-688002)
chr7 (196-263)||(43223598-43223665)
chr7 (1-55)||(48933215-48933269)
chr7 (1-58)||(1907434-1907491)
chr7 (1-58)||(2650831-2650888)
chr7 (1-58)||(15014408-15014465)
chr7 (1-58)||(23577192-23577249)
chr7 (1-58)||(21871647-21871704)
chr7 (1-58)||(33427769-33427825)
chr7 (194-257)||(44300858-44300922)
chr7 (1-55)||(14786641-14786695)
chr7 (1-58)||(42926422-42926480)
chr7 (1-58)||(1824203-1824260)
chr7 (1-51)||(39979634-39979684)
chr7 (191-233)||(40855944-40855986)
chr7 (191-233)||(45112337-45112379)
chr7 (1-58)||(4514844-4514901)
chr7 (194-231)||(24430237-24430274)
chr7 (1-58)||(36993899-36993956)
chr7 (1-58)||(38057711-38057768)
chr7 (1-58)||(38090342-38090399)
chr7 (191-272)||(38398325-38398406)
chr7 (191-272)||(38400867-38400948)
chr7 (14-58)||(32267438-32267482)
[»] chr5 (49 HSPs)
chr5 (1-58)||(7888876-7888933)
chr5 (1-58)||(12045806-12045863)
chr5 (1-58)||(36196473-36196530)
chr5 (1-58)||(38837674-38837731)
chr5 (1-55)||(618373-618427)
chr5 (191-268)||(30911-30988)
chr5 (1-54)||(746875-746928)
chr5 (1-58)||(4125191-4125248)
chr5 (1-58)||(8108863-8108920)
chr5 (1-58)||(16121842-16121899)
chr5 (1-58)||(16631877-16631934)
chr5 (192-268)||(25828314-25828390)
chr5 (1-52)||(23975714-23975765)
chr5 (1-58)||(2472717-2472774)
chr5 (1-58)||(10494816-10494873)
chr5 (1-58)||(12328229-12328286)
chr5 (1-54)||(15061052-15061105)
chr5 (1-58)||(17039634-17039691)
chr5 (1-58)||(17771971-17772028)
chr5 (1-58)||(26708588-26708645)
chr5 (1-58)||(26978322-26978379)
chr5 (1-58)||(28265478-28265535)
chr5 (1-58)||(36716203-36716260)
chr5 (191-286)||(23141501-23141596)
chr5 (1-55)||(25652589-25652643)
chr5 (1-55)||(35620350-35620403)
chr5 (1-58)||(7003733-7003790)
chr5 (1-58)||(8886854-8886911)
chr5 (5-58)||(13974081-13974134)
chr5 (1-58)||(36831893-36831950)
chr5 (6-58)||(40484128-40484180)
chr5 (1-63)||(23409059-23409122)
chr5 (194-257)||(25694581-25694644)
chr5 (1-58)||(5982724-5982782)
chr5 (1-51)||(20187951-20188001)
chr5 (1-55)||(24138847-24138901)
chr5 (5-56)||(17986812-17986863)
chr5 (1-58)||(20959587-20959644)
chr5 (17-58)||(29727898-29727939)
chr5 (1-58)||(33734976-33735033)
chr5 (1-58)||(33818564-33818621)
chr5 (7-58)||(13620130-13620181)
chr5 (194-257)||(38309915-38309980)
chr5 (191-232)||(6311118-6311159)
chr5 (1-46)||(10420267-10420312)
chr5 (26-55)||(19890992-19891021)
chr5 (5-58)||(25397791-25397844)
chr5 (1-58)||(36597343-36597400)
chr5 (189-233)||(6277742-6277786)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-56)||(10668-10723)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-58)||(5982-6039)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-58)||(7584-7641)
[»] scaffold0576 (1 HSPs)
scaffold0576 (1-58)||(9232-9289)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-58)||(14993-15050)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-58)||(19682-19739)
[»] scaffold0161 (1 HSPs)
scaffold0161 (5-58)||(6878-6931)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-58)||(12731-12788)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-58)||(22290-22347)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-58)||(17620-17677)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-58)||(219715-219772)
scaffold0009 (1-58)||(182609-182666)
scaffold0009 (1-58)||(215666-215723)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-58)||(3821-3878)
scaffold0007 (1-58)||(202853-202910)
scaffold0007 (5-58)||(274668-274721)
[»] scaffold0023 (1 HSPs)
scaffold0023 (2-58)||(39706-39762)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-58)||(26562-26619)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-58)||(43996-44053)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-61)||(74717-74777)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-57)||(84678-84734)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-58)||(921-979)
[»] scaffold0554 (1 HSPs)
scaffold0554 (1-58)||(9889-9946)
[»] scaffold0184 (1 HSPs)
scaffold0184 (5-62)||(7539-7596)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-55)||(173525-173578)
[»] scaffold0087 (1 HSPs)
scaffold0087 (1-58)||(37790-37847)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-58)||(440042-440099)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-58)||(58661-58718)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-56)||(10237-10292)
[»] scaffold0655 (1 HSPs)
scaffold0655 (1-55)||(3168-3222)
[»] scaffold0472 (1 HSPs)
scaffold0472 (197-242)||(8014-8059)
[»] scaffold0249 (1 HSPs)
scaffold0249 (194-241)||(20172-20220)
[»] scaffold0160 (1 HSPs)
scaffold0160 (191-235)||(26053-26097)


Alignment Details
Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 189 - 286
Target Start/End: Complemental strand, 31555927 - 31555830
Alignment:
Q  189 atctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagatttgttattgt 286  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  31555927 atcttataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaaacatctttcaaaaattgtataccagcaagagagatttgttattgt 31555830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6598543 - 6598600
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6598543 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 6598600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6605556 - 6605499
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6605556 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 6605499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9893042 - 9893099
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9893042 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 9893099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15448464 - 15448521
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15448464 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 15448521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24661069 - 24661012
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24661069 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 24661012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26224507 - 26224564
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26224507 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 26224564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28364990 - 28365047
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28364990 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 28365047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30834020 - 30833963
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30834020 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 30833963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22579409 - 22579355
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22579409 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 22579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 495687 - 495630
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  495687 tgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagta 495630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1939302 - 1939245
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1939302 tgaggaatttcattttttcggtcactaatttccctcgctaattttgctttttctagta 1939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5360488 - 5360545
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  5360488 tgaggaattttattttttccgtcactaatttccctcgctaattttgctttttctagta 5360545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15364518 - 15364461
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  15364518 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 15364461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16250862 - 16250805
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  16250862 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 16250805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20182224 - 20182281
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20182224 tgaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagta 20182281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 21141019 - 21141076
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtat 59  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  21141019 gaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagtat 21141076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21990234 - 21990178
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21990234 tgaggaatttcattttt-ccgtcattaatttccctcgctaattttgctttttctagta 21990178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22153767 - 22153710
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  22153767 tgaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagta 22153710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25398081 - 25398138
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  25398081 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12200773 - 12200828
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  12200773 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctag 12200828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 15961465 - 15961410
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  15961465 aggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 15961410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2669388 - 2669445
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  2669388 tgaggaatttcatttttttcgtcactaatttccctcgttaattttgctttttctagta 2669445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5250218 - 5250275
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  5250218 tgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagta 5250275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11049811 - 11049754
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  11049811 tgaggaatttcattttttccgtcactaatttcccttgctaattttgttttttctagta 11049754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12160907 - 12160850
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  12160907 tgaggaatttcattttttacgtcactaatttccctcgctaattttactttttctagta 12160850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15509235 - 15509288
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15509235 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttct 15509288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 9350930 - 9351009
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa-catctaaagcatccttcaaaaattgtataccagcaa 269  Q
    |||||||||||||||| || ||| ||||||| ||||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  9350930 ctcataaaatagtacggatagtaatatttaataaaataaaaaaacatccaaaacatccttcagaaattgtataccagcaa 9351009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5192249 - 5192195
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  5192249 tgaggaatttcattttttccttcactaattttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6978356 - 6978406
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  6978356 tgaggaatttcattttttccgtaactaatttccctcgctaattttgctttt 6978406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10458843 - 10458900
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  10458843 tgaggaaattcattttttccgtcactaatttccctcactaattttactttttctagta 10458900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 17919619 - 17919672
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  17919619 gaatttcattttttccgtcattgatttctctcgctaattttgttttttctagta 17919672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27796894 - 27796837
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27796894 tgagaaatatcatttttttcgtcactaatttccctcgctaattttgctttttctagta 27796837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28668179 - 28668236
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  28668179 tgaggaattttattttttccgtcactgatttccctcgctaattttactttttctagta 28668236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33250768 - 33250711
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  33250768 tgaggaatttcattttttccgtcactaatttccctcgttaattttgtcttttctagta 33250711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12499295 - 12499346
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  12499295 tgaggaatttcattttttccgtcactactttccctcgctaattttgtttttt 12499346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12506624 - 12506675
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  12506624 tgaggaatttcattttttccgtcactactttccctcgctaattttgtttttt 12506675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12509606 - 12509555
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  12509606 tgaggaatttcattttttccgtcactactttccctcgctaattttgtttttt 12509555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18492448 - 18492503
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  18492448 tgagaaatttcattttttccgtcactaatttgcatcgctaattttgctttttctag 18492503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2992694 - 2992751
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| ||||||    
T  2992694 tgaggaattttattttttccatcactaatttccctcgctaattatgcttttcctagta 2992751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11077728 - 11077788
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtattg 61  Q
    |||||||||| || ||||||||||  |||||||||| |||||||| |||||||||||||||    
T  11077728 tgaggaattttatgttttccgtcacaaatttccctccctaatttttctttttctagtattg 11077788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 9885328 - 9885379
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||||||||||    
T  9885328 attttattttttccgtcactaatttccctccctgattttgctttttctagta 9885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 31556052 - 31555990
Alignment:
Q  62 ccttgtggacaacaactttagtgtcctttccaatatcctatggaggttccccatatccgcactt 125  Q
    |||||||| |||||||||||||||| || ||||||||||||||||| | |||||| ||||||||    
T  31556052 ccttgtgggcaacaactttagtgtctttcccaatatcctatggagg-tgcccatacccgcactt 31555990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 12157430 - 12157380
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagt 57  Q
    |||| ||||||||||||| |||||||||||  |||||||||||||||||||    
T  12157430 attttattttttccgtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13251439 - 13251385
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||| ||||| ||||| ||||||| ||| ||||||||||||||||||    
T  13251439 tgaggaatttcacttttttcgtcactaatttctctctctaattttgctttttcta 13251385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22055672 - 22055622
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||| ||||    
T  22055672 tgaggaattttattttttctgtcattaatttccctctctaattttgttttt 22055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12351646 - 12351589
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||  ||||| | ||||||||||||    
T  12351646 tgaggaattttattttttccgtcactaatttccctccttaattatactttttctagta 12351589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22083917 - 22083974
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  22083917 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 22083974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26939666 - 26939723
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||  |||| |||||||||||  ||||||| ||||||||||||    
T  26939666 tgaggaatttcattttttttgtcactaatttccctcagtaattttactttttctagta 26939723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 6065522 - 6065566
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||    
T  6065522 attttattttttccgtcattaattttcctccctaattttgctttt 6065566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 8844222 - 8844171
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| || ||||| ||||||||||||    
T  8844222 attttattttttccgtcactaatttccctccctgatttttctttttctagta 8844171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 33960118 - 33960079
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  33960118 ataaaatagtacgaatcgtagtatttagccaaataaaaaa 33960079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 6337902 - 6337860
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  6337902 ctcataaaatagtatgaatggtagtatttaaccaaataaaaaa 6337860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 6938183 - 6938229
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatc 237  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||    
T  6938183 ctcataaaataatacgaatcgtagtatttagtaaaattaaaaacatc 6938229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 20692867 - 20692817
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||| ||||||||||||| |||||| ||||| |||||||| ||||||||    
T  20692867 gaattttattttttccgtcactaattttcctcgttaattttgttttttcta 20692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9060169 - 9060222
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    ||||| |||| ||||||||||||| ||||||| |||  ||||||||||||||||    
T  9060169 tgagggattttattttttccgtcactaatttcgctctttaattttgctttttct 9060222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12951787 - 12951844
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  12951787 tgagaaattttatgttttccgtcacaaatttccctctctaattttgcttttcctagta 12951844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14886640 - 14886693
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    ||||| |||| |||||||| |||| |||||| |||| |||||||||||||||||    
T  14886640 tgagggattttattttttctgtcactaattttcctccctaattttgctttttct 14886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18048867 - 18048924
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| ||||||||||||| |||||| |||| ||||||||| |||| ||||||    
T  18048867 tgagaaattttattttttccgtcactaattttcctctctaattttgtttttcctagta 18048924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 33191184 - 33191213
Alignment:
Q  26 taatttccctcgctaattttgctttttcta 55  Q
    ||||||||||||||||||||||||||||||    
T  33191184 taatttccctcgctaattttgctttttcta 33191213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1954963 - 1955015
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagt 57  Q
    |||||| ||||||||||||| | ||||||||  |||||||||||||| |||||    
T  1954963 gaattttattttttccgtcactcatttcccttcctaattttgcttttcctagt 1955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 2501707 - 2501783
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagc 267  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  2501707 ctcataaaagagtacgaatcgtagtatttaacaaaataaaaaacatccaaaacatccttcaaaaattgtataccagc 2501783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9110035 - 9109978
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9110035 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 9109978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28229515 - 28229458
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28229515 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 28229458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46790079 - 46790136
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46790079 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 46790136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6412113 - 6412056
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  6412113 tgaggaatttcattttttccgttactaatttccctcgctaattttgctttttctagta 6412056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6459296 - 6459353
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  6459296 tgaggaatttcattttttccgtcactaatttccctcgctaatttcgctttttctagta 6459353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8941054 - 8940997
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8941054 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 8940997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12720888 - 12720945
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  12720888 tgaggaattttattttttccgtcactaatttccctcgctaattttgctttttctagta 12720945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20408220 - 20408163
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  20408220 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagta 20408163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45839371 - 45839428
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  45839371 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 45839428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46339505 - 46339448
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  46339505 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagta 46339448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50092358 - 50092301
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  50092358 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 50092301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51973503 - 51973560
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  51973503 tgaggaatttcattttttccgttactaatttccctcgctaattttgctttttctagta 51973560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52183757 - 52183814
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  52183757 tgaggaattttattttttccgtcattaatttccctcgttaattttgctttttctagta 52183814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46786018 - 46785958
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtattg 61  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  46786018 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctaatattg 46785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4340486 - 4340540
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4340486 tgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttcta 4340540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41120797 - 41120743
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  41120797 tgaggaatttcattttttccatcactaatttccctcgctaattttgctttttcta 41120743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9177179 - 9177236
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  9177179 tgaggaatttcattttttccgttactaatttccctcgctaattttgttttttctagta 9177236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12161893 - 12161950
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  12161893 tgaggaatttcattttttccgtcaataattttcctcgctaattttactttttctagta 12161950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17200070 - 17200013
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  17200070 tgaggaatttcattttttccgtcactgatttccctcgctaattttgttttttctagta 17200013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18890609 - 18890556
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  18890609 tgaggaatttcattttttccatcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22603627 - 22603684
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  22603627 tgaggaatttcattttttccatcactaatttcccttgctaattttgctttttctagta 22603684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23457976 - 23458033
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  23457976 tgaggaatttcattttttccgtcaataattttcctcgctaattttactttttctagta 23458033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 12370008 - 12369954
Alignment:
Q  5 gaatttcatttttt-ccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  12370008 gaatttcatttttttccgtcactaatttccctcgctaattttgctttttctagta 12369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7181615 - 7181558
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||||    
T  7181615 tgaggaattttcttttttccgtcactaatttcccttgctaattttgctttttctagta 7181558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9985387 - 9985330
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||    
T  9985387 tgaggaatttgattttttccgtcactaatttcccttgctaattttgttttttctagta 9985330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15243164 - 15243221
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  15243164 tgaggaatttcattttttccgtcactaatttctctcgctgatttttctttttctagta 15243221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19865323 - 19865380
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  19865323 tgagaaatttcattttttccgtcactaattttcctcgctaattttactttttctagta 19865380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22158881 - 22158934
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  22158881 tgaggaatttcattttttctgtcactaatttccctcgctaattttactttttct 22158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25788057 - 25788000
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||  |||||||||||| |||||| ||||||||||||||||||||||||||    
T  25788057 tgaggaattttcttttttccgtcactaattttcctcgctaattttgctttttctagta 25788000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29549497 - 29549554
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  29549497 tgagaaattttatttttttcgtcactaatttccctcgctaattttgctttttctagta 29549554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 22580046 - 22580002
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaaca 235  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  22580046 ctcataatatagtacgaatcgtagtatttaacaaaataaaaaaca 22580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20290380 - 20290326
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  20290380 tgaggaatttcattttt-ccgtcactaatttccctcgctaattttactttttctag 20290326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17661129 - 17661183
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||    
T  17661129 tgaggaattttattttttccgtcactaatttccgtcgttaattttgctttttcta 17661183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9464182 - 9464235
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||| || |||||||| ||||||||    
T  9464182 tgaggaatttcattttttccgtcactaatttccgtcactaattttactttttct 9464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 10786355 - 10786392
Alignment:
Q  196 aaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10786355 aaaatagtacgaatcgtagtatttaacaaaataaaaaa 10786392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27253915 - 27253858
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| |||||||||||||||||||| |||| |||||||| ||||||||||||    
T  27253915 tgagaaattttattttttccgtcattaattttcctccctaatttttctttttctagta 27253858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38531230 - 38531173
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  38531230 tgaggaattttattttttccgtcacttatttccctccctaattttactttttctagta 38531173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48522597 - 48522654
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| |||||||| |||| |||||| ||||||||||||||||||||||||||    
T  48522597 tgagaaattttattttttctgtcactaattttcctcgctaattttgctttttctagta 48522654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50845390 - 50845333
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||||||||||    
T  50845390 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagta 50845333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16913637 - 16913581
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagt 57  Q
    |||||||||| ||||||||||||| ||||||||||  |||||||||||||| |||||    
T  16913637 tgaggaattttattttttccgtcactaatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 20415106 - 20415170
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||||||||||||||||||| | |||| |||||||||| |||  ||||||||||||||    
T  20415106 ataaaatagtacgaatcgtagtatttagccaaataaaaaaacatccaaaatatccttcaaaaatt 20415170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 41752517 - 41752569
Alignment:
Q  6 aatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| ||||||||||||| |||||||| || |||||||||||||||||||||    
T  41752517 aattttattttttccgtcactaatttccgtcactaattttgctttttctagta 41752569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14760946 - 14761003
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  ||||||||||  ||||||||||||||||||||    
T  14760946 tgaggaattttatgttttccgtcacaaatttccctctttaattttgctttttctagta 14761003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18894960 - 18894903
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| ||||||| ||||| |||||| ||||||||||||||||||| ||||||    
T  18894960 tgaggtattttatttttttcgtcactaattttcctcgctaattttgcttttcctagta 18894903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46865322 - 46865379
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| ||||||||||||| ||||||||||| ||| |||| ||||||||||||    
T  46865322 tgagggattttattttttccgtcactaatttccctccctagtttttctttttctagta 46865379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 29512186 - 29512138
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatcta 239  Q
    |||||||||||||| |||| |||||||||||  ||||||||||||||||    
T  29512186 ctcataaaatagtatgaattgtagtatttaatcaaataaaaaacatcta 29512138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 30928432 - 30928388
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  30928432 attttattttttccgtcactaatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 32888387 - 32888455
Alignment:
Q  192 tcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgta 260  Q
    |||||||||||||||||| ||||||||||   |||||||||||||| |||  ||||||  |||||||||    
T  32888387 tcataaaatagtacgaattgtagtatttaggcaaataaaaaacatccaaaatatccttagaaaattgta 32888455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 13797045 - 13796950
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagatttgttattgt 286  Q
    |||||||||||||| |||| ||||||||||   |||||||||||||| |||  |||| | ||||||||||  || ||||||  || ||||||||||    
T  13797045 ctcataaaatagtatgaattgtagtatttagtcaaataaaaaacatccaaaatatccctaaaaaattgtacgccggcaagatggagttgttattgt 13796950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41071895 - 41071852
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattt 44  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
T  41071895 tgaggaatttcattttctccgtcactaatttccctcgcaaattt 41071852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 2465518 - 2465464
Alignment:
Q  212 tagtatttaacaaaataaaaaac-atctaaagcatccttcaaaaattgtatacca 265  Q
    ||||||||||||||||||||||  ||| ||| |||||||||| ||||||||||||    
T  2465518 tagtatttaacaaaataaaaaaatatccaaaacatccttcaataattgtatacca 2465464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 35949572 - 35949530
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  35949572 ctcataaaatagtatgaatggtagtatttaaccaaataaaaaa 35949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 48796673 - 48796715
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  48796673 ctcataaaatagtatgaatggtagtatttaaccaaataaaaaa 48796715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7830110 - 7830167
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| || |||||| |||| |||||||||| |||||||||||||| ||||||    
T  7830110 tgagaaattttatgttttccatcataaatttccctccctaattttgcttttcctagta 7830167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 9259231 - 9259186
Alignment:
Q  13 ttttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||| |||||| ||||| |||||||| |||||||||||    
T  9259231 ttttttccgtcactaattttcctcgttaattttgttttttctagta 9259186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12989931 - 12989988
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| |||||||||||||  |||||| ||| ||||||||||||||| |||||    
T  12989931 tgagaaattttattttttccgtcaccaatttctctctctaattttgctttttttagta 12989988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13308880 - 13308823
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||||| | || ||||||||||| ||||||||| |||| ||||||    
T  13308880 tgaggaattttattttttcggacactaatttccctctctaattttgtttttcctagta 13308823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19081807 - 19081864
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| ||||||||| ||| ||||||||||| |||||||| |||||| |||||    
T  19081807 tgagaaattttattttttccatcactaatttccctctctaattttactttttttagta 19081864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19129695 - 19129752
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| ||||||||| ||| ||||||||||| |||||||| |||||| |||||    
T  19129695 tgagaaattttattttttccatcactaatttccctctctaattttactttttttagta 19129752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29093614 - 29093557
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||||| ||| ||| ||||||||  ||||||| ||||||||||||    
T  29093614 tgaggaattttattttttcggtccttagtttccctccttaattttactttttctagta 29093557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 48662793 - 48662837
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaaca 235  Q
    ||||||||||| || ||||||||||||||| ||||| ||||||||    
T  48662793 ctcataaaataatatgaatcgtagtatttagcaaaaaaaaaaaca 48662837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 29528161 - 29528066
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagatttgttattgt 286  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||| |||  ||||||||    
T  29528161 ctcataaaatagtacgaatcgtattatttaacaaaataaaaaacatccaaaacatccttcaaaaattatataccagcaggagggatcggttattgt 29528066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4331055 - 4331112
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4331055 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 4331112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8555364 - 8555307
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8555364 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 8555307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19240944 - 19241001
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19240944 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 19241001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19314128 - 19314185
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19314128 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 19314185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19488121 - 19488064
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19488121 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 19488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24193256 - 24193199
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24193256 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 24193199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24576084 - 24576027
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24576084 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 24576027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27910824 - 27910767
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27910824 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 27910767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27957243 - 27957186
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27957243 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 27957186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4647815 - 4647758
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  4647815 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 4647758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9915101 - 9915044
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  9915101 tgaggaatttcattttttccgtcactaatttctctcgctaattttgctttttctagta 9915044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16061999 - 16061942
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  16061999 tgaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagta 16061942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17810375 - 17810432
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  17810375 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagta 17810432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25274674 - 25274731
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25274674 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 25274731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25655918 - 25655861
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  25655918 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 25655861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27869315 - 27869372
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27869315 tgaggaatttcattttttccatcactaatttccctcgctaattttgctttttctagta 27869372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32247986 - 32248043
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  32247986 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 32248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33652644 - 33652697
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33652644 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 33652697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3823210 - 3823264
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3823210 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 3823264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8824902 - 8824959
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  8824902 tgaggaatttgattttttccatcactaatttccctcgctaattttgctttttctagta 8824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11938822 - 11938878
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11938822 tgaggaatttcatttt-tccgtcactaatttccctcgctaattttgctttttctagta 11938878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13060991 - 13060934
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  13060991 tgaggaatttcattttttccgtcactaatttacctcgctaattttgcttttgctagta 13060934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18010120 - 18010067
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  18010120 tgaggaatttcattttttccgtcactaatttctctcgctaattttgctttttct 18010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19256289 - 19256346
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  19256289 tgaggaattttattttttccgtcactaatttccctcgttaattttgctttttctagta 19256346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21350555 - 21350612
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  21350555 tgaggaatttcattttttccgtcactaatttcccttgcttattttgctttttctagta 21350612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22939390 - 22939447
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  22939390 tgaggaatttcattttttccgtcactaatttccttcactaattttgctttttctagta 22939447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25000491 - 25000434
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  25000491 tgaggaatttcattttttccgtcactaatttccctcactaattttactttttctagta 25000434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30467014 - 30466957
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||    
T  30467014 tgaggaattttaatttttccgtcactaatttccctcgctaattttgctttttctagta 30466957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30688013 - 30688070
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  30688013 tgaggaatttcattttttcggtcactgatttccctcgctaattttgctttttctagta 30688070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43431619 - 43431562
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  43431619 tgaggaatttcattttttccgtcactaatttccctcactaatttttctttttctagta 43431562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 43239317 - 43239388
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtata 262  Q
    ||||||||||||||||||| || |||||||||||||||||||||||  ||| |||| | |||||||||||||    
T  43239317 ctcataaaatagtacgaattgtggtatttaacaaaataaaaaacattcaaaacatcttacaaaaattgtata 43239388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 43511327 - 43511390
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaa 254  Q
    |||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  43511327 ctcataaaatagtatggttcgtagtatttaacaaaataaaaaacatccaaaacatccttcaaaa 43511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23752346 - 23752292
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  23752346 tgagaaatttcattttttccgtcactaatatccctcgctaattttgctttttcta 23752292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24636729 - 24636787
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgct-ttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  24636729 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctattttctagta 24636787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29351000 - 29351058
Alignment:
Q  1 tgaggaatttcattttttcc-gtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  29351000 tgaggaatttcattttttctagtcactaatttccctcgctaattttgctttttctagta 29351058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6817131 - 6817188
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  6817131 tgaggaatttcattttttccgtcactgattttccttgctaattttgctttttctagta 6817188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9631481 - 9631538
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  9631481 tgaggaattttattttttccgtcactaattttccttgctaattttgctttttctagta 9631538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32961736 - 32961793
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||    
T  32961736 tgaggaatttcattttttctgtcactgatttccctcgctaattttgctttttttagta 32961793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33413036 - 33412980
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  33413036 tgaggaatttcattttttccgttactaatttccctcgctaatttt-ctttttctagta 33412980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42700717 - 42700660
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||    
T  42700717 tgaggaatttcattttttccgtcactgattttcctcgctaattttactttttctagta 42700660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 14304307 - 14304359
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  14304307 gagggatttcattttttccatcactaatttccctcgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10917904 - 10917961
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||||||||||    
T  10917904 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagta 10917961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17824676 - 17824619
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||||||||||    
T  17824676 tgaggaattttatgttttccgtcacaaatttccctctctaattttgctttttctagta 17824619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21219300 - 21219243
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  21219300 tgagtaatttcattttttccgtcactaatttctctcgctgatttttctttttctagta 21219243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 25178932 - 25178859
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa-catctaaagcatccttcaaaaattgtatac 263  Q
    |||||||||||  | ||||||||  |||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  25178932 ctcataaaataaaatgaatcgtaaaatttaacaaaataaaaaaacatccaaagcatccttcaaaaaatgtatac 25178859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25273387 - 25273331
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||| |||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  25273387 tgaggactttcattttttc-gtcactaatttccctcgttaattttgctttttctagta 25273331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31399568 - 31399511
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| | ||| |||||||||||| |||||||| |||||||||||    
T  31399568 tgaggaatttcatttttttcatcactaatttccctcgttaattttgttttttctagta 31399511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 20216346 - 20216410
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||||||||||||||||||| | |||| |||||||||| |||  ||||||||||||||    
T  20216346 ataaaatagtacgaatcgtagtatttagccaaataaaaaaacatccaaaatatccttcaaaaatt 20216410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 20235944 - 20236008
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||||||||||||||||||| | |||| |||||||||| |||  ||||||||||||||    
T  20235944 ataaaatagtacgaatcgtagtatttagccaaataaaaaaacatccaaaatatccttcaaaaatt 20236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 42987721 - 42987649
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccag 266  Q
    ||||||||||||| ||| || |||||| | ||||||||||||||||||  |||||| |||||||||| |||||    
T  42987721 ataaaatagtacggatcataatatttagctaaataaaaaacatctaaaatatccttaaaaaattgtacaccag 42987649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5670229 - 5670174
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    ||||||||| |||||||||||||| |||||||||||| | |||||| |||||||||    
T  5670229 tgaggaattccattttttccgtcactaatttccctcgttgattttgttttttctag 5670174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 15251684 - 15251735
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  15251684 attttattttttccgtcactaatttccctccctaattttgctttttcaagta 15251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 29345154 - 29345205
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  29345154 attttattttttccgtcactaatttccctccctaatttttctttttctagta 29345205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 40289473 - 40289424
Alignment:
Q  9 ttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||| |||||| |||||||||||||  |||||||||||    
T  40289473 ttcattttttccgtcactaattttcctcgctaattttaatttttctagta 40289424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 6103802 - 6103760
Alignment:
Q  14 tttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  6103802 tttttctgtcattaattttcctctctaattttgctttttctag 6103760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6816443 - 6816386
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| ||||||| | ||| |||||||||||||||||| ||||||| ||||||    
T  6816443 tgagaaattttatttttttcatcactaatttccctcgctaattatgcttttcctagta 6816386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17103925 - 17103868
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||| ||| ||||||||| |||||||||||    
T  17103925 tgaggaattttatgttttccgtcacaaatttctctctctaattttgttttttctagta 17103868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 6084300 - 6084252
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||||||| ||||||  ||| ||||||||||||||||||    
T  6084300 attttattttttccgtcactaatttatctccctaattttgctttttcta 6084252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 7057739 - 7057819
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaaga 271  Q
    |||||||||||||| |||| ||||||||||   ||||||| ||||| ||||  |||| | |||||||||| ||| ||||||    
T  7057739 ctcataaaatagtatgaattgtagtatttagtcaaataaataacatttaaaatatccctaaaaaattgtacaccggcaaga 7057819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 35678113 - 35678065
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||| |||||||||| ||||  |||||||||||||||||    
T  35678113 attttattttttccttcattaattttcctccttaattttgctttttcta 35678065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4627138 - 4627081
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4627138 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 4627081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38619924 - 38619981
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38619924 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 38619981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 8644197 - 8644122
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccag 266  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||| |||| |||||||||||||||||||    
T  8644197 ctcataaaatagtacgaatcgtagtattgaacaaaataaaaaacattcaaaacatctttcaaaaattgtataccag 8644122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4586818 - 4586761
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4586818 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 4586761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7112006 - 7111949
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7112006 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 7111949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22168345 - 22168402
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22168345 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 22168402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38645827 - 38645884
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38645827 tgaggaatttcattttttccgtcaataatttccctcgctaattttgctttttctagta 38645884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29625402 - 29625453
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29625402 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 29625453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5473926 - 5473983
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  5473926 tgaggaatttcatttttcccgtcactaatttccctcgctaattttgctttttctagta 5473983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9238685 - 9238628
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  9238685 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttttagta 9238628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9670539 - 9670482
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  9670539 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 9670482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19839256 - 19839313
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19839256 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 19839313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44783560 - 44783617
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  44783560 tgaggaatttcattttttccgtcactaatttccctcgctagttttgctttttctagta 44783617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 30269047 - 30268991
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  30269047 gaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagta 30268991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 30283142 - 30283198
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  30283142 gaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagta 30283198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45091339 - 45091395
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  45091339 gaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 45091395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 8614690 - 8614765
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccag 266  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||  ||| |||| || ||||||||||||||||    
T  8614690 ctcataaaatagtacgaatcatagtattgaacaaaataaaaaacattcaaaacatcttttaaaaattgtataccag 8614765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37378683 - 37378628
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  37378683 tgaggaatttcattttttccgtcaataattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45532639 - 45532585
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  45532639 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttcta 45532585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55309273 - 55309215
Alignment:
Q  1 tgaggaatttcatttttt-ccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  55309273 tgaggaatttcatttttttccgtcactaatttccctcgctaattttgctttttctagta 55309215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13564971 - 13564918
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  13564971 gaatttcattatttccgtcactaatttccctcgctaattttgctttttctagta 13564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24682387 - 24682330
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  24682387 tgaggaattttattttttccgtcattaatttccctccctaatttttctttttctagta 24682330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27040085 - 27040028
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  27040085 tgaggaattttcttttttccgtcactaatttccctcgctaattttgctttttctagta 27040028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32175797 - 32175740
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  32175797 tgaggaattttattttttccgtcactaatttccctcgttaattttgctttttctagta 32175740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54539363 - 54539420
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  54539363 tgaggaatttcattttttccgtcactaattttccttgctaattttgctttttctagta 54539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 5798393 - 5798464
Alignment:
Q  197 aaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagca 268  Q
    |||||||| ||||||||||||||||||||||||||| |||| ||| ||||||| |||| |||||||| ||||    
T  5798393 aaatagtatgaatcgtagtatttaacaaaataaaaagcatccaaaacatcctttaaaagttgtatactagca 5798464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2275738 - 2275680
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaa-ttttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  2275738 tgaggaatttcattttttccgtcactaatttccctcgctaatttttgttttttctagta 2275680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13028876 - 13028819
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  13028876 tgaggaattgcattttttccgtcactaattttcctcgctaagtttgctttttctagta 13028819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18051916 - 18051969
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18051916 tgagaaatttcattttttccgtcactaatttccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18714979 - 18715036
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||||    
T  18714979 tgaggaattttattttttccgtcacttatttccctcgctaatattgctttttctagta 18715036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19680484 - 19680427
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  19680484 tgaggaatttcattttttccgtcactaaattccctcactaatttttctttttctagta 19680427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30568059 - 30568006
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  30568059 tgaggaatttcattttttccgtcactaatttcgctcgctaattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42055474 - 42055531
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| |||||   |||||||||||||||||||||||||||||||    
T  42055474 tgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttttctagta 42055531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46286289 - 46286232
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||    
T  46286289 tgaggaattttattttttccgtcactaatttccgtcactaattttgctttttctagta 46286232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25026634 - 25026688
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  25026634 tgagaaatttcattttttccgtcactaatttccctcactaattttactttttcta 25026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 27791017 - 27790975
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  27791017 ctcataaaatagtacgaatcgtagtatttaactaaataaaaaa 27790975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 30420089 - 30420036
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||| ||||||||||||| |||||| |||| |||||||||||||||||||||    
T  30420089 gaattttattttttccgtcactaattttcctccctaattttgctttttctagta 30420036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 29405835 - 29405771
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||  |||| |||||||||    
T  29405835 ataaaatagtacgaatcgtagtatttaaccaaataaaaaaacatccaaaatatccctcaaaaatt 29405771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1638524 - 1638586
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtattgcc 63  Q
    ||||| |||| ||||||||||||| ||||||||||| ||||||||| |||| |||||| ||||    
T  1638524 tgagggattttattttttccgtcactaatttccctccctaattttgtttttcctagtagtgcc 1638586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 12072043 - 12072093
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  12072043 gaatttcattttttcgatcactaatttcgctcgctaattttgctttttcta 12072093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12106059 - 12106113
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||| ||||||||| ||| |||||||||||||||||||| |||||||||    
T  12106059 tgagaaattttattttttccatcaataatttccctcgctaattttactttttcta 12106113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25147798 - 25147848
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| || ||||||||||| |||||||||| ||||||||||||||    
T  25147798 tgaggaattttatgttttccgtcataaatttccctctctaattttgctttt 25147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9239341 - 9239288
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||| || |||||    
T  9239341 tgagcaatttcattttttccgtcactaatttccctcgttaattttactctttct 9239288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30508064 - 30508121
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||| |||||   |||| ||||||||||||||||||||||||||    
T  30508064 tgaggaattttatttttttcgtcacagattttcctcgctaattttgctttttctagta 30508121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33914136 - 33914193
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  33914136 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 33914193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36689754 - 36689807
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||| ||||||||||||||| ||| |||||||||||| |||||||| |||||||    
T  36689754 tgagaaatttcattttttccatcactaatttccctcgttaattttgttttttct 36689807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 8878966 - 8879013
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  8878966 attttattttttccgtcactaatttccctctctgattttgctttttct 8879013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 22128366 - 22128315
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| || |||||| |||||||||||    
T  22128366 attttattttttccgtcactaatttccctccctgattttgttttttctagta 22128315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 25225188 - 25225231
Alignment:
Q  15 ttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||    
T  25225188 ttttccgtcattgatttccctccctaatttttctttttctagta 25225231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 47106591 - 47106516
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccag 266  Q
    ||||||||||||||  |||||||||  ||| | ||||||||||||||||||  |||| | |||||||||| |||||    
T  47106591 ctcataaaatagtataaatcgtagtgcttagccaaataaaaaacatctaaaatatccctaaaaaattgtacaccag 47106516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 2073592 - 2073542
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaa 241  Q
    ||||||||||| ||||||||||||||||||   |||| |||||||||||||    
T  2073592 ctcataaaataatacgaatcgtagtatttagtcaaattaaaaacatctaaa 2073542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 7262157 - 7262199
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  7262157 ctcataaaatagtatgaatggtagtatttaaccaaataaaaaa 7262199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 23349359 - 23349317
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| ||||||||||||||| | ||||||||||    
T  23349359 ctcataaaatagtatgaatcgtagtatttagccaaataaaaaa 23349317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 38223589 - 38223643
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagt 57  Q
    |||||||| ||||||||||||| |||| |||||| |||||||| | |||||||||    
T  38223589 aggaattttattttttccgtcactaatctccctccctaattttacattttctagt 38223643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9913335 - 9913392
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| ||||||||||||| |||||| |||| ||||||||  |||||||||||    
T  9913335 tgagggatttaattttttccgtcactaattttcctccctaattttaatttttctagta 9913392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 22829883 - 22829927
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaaca 235  Q
    ||||||||||| || ||||||||||||||| | ||||||||||||    
T  22829883 ctcataaaataatatgaatcgtagtatttagccaaataaaaaaca 22829927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 12757897 - 12757982
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagat 276  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||  ||||||||    
T  12757897 ctcataaaatagtaagaatcgtagtatttaacaaaataaaaaacatccaaaacattcttcaaaaattgtatatcagtgagagagat 12757982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12779675 - 12779732
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12779675 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 12779732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20065134 - 20065077
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20065134 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 20065077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37552302 - 37552359
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37552302 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 37552359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41736247 - 41736304
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41736247 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 41736304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 44723009 - 44723064
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44723009 aggaatttcattttttccatcattaatttccctcgctaattttgctttttctagta 44723064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1141611 - 1141664
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1141611 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7093643 - 7093700
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  7093643 tgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttactagta 7093700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13788115 - 13788058
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  13788115 tgaggaatttcattttttccgtcactgatttccctcgctaattttgctttttctagta 13788058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14757181 - 14757124
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  14757181 tgaggaatttcattttttccgtcattaattttcttcgctaattttgctttttctagta 14757124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15636795 - 15636742
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15636795 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 15636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22140424 - 22140367
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  22140424 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 22140367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27039968 - 27039911
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  27039968 tgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagta 27039911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28319639 - 28319582
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  28319639 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 28319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32300526 - 32300579
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32300526 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43408571 - 43408514
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  43408571 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 43408514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 44476431 - 44476378
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44476431 gaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 44476378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 32185908 - 32185964
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  32185908 gaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 32185964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18551313 - 18551256
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  18551313 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttttagta 18551256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21293771 - 21293714
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  21293771 tgagaaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 21293714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28841402 - 28841345
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  28841402 tgaggaatttcattttttccgttactaatttccctcgctaattttgcttttcctagta 28841345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37724052 - 37723997
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  37724052 tgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctag 37723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38362331 - 38362276
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  38362331 tgaggaatttcattttttccgtcactaatttcccttactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32009027 - 32009085
Alignment:
Q  1 tgaggaatttcatttt-ttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  32009027 tgaggaatttcatttttttccgtcactaattttcctcgctaattttgctttttctagta 32009085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8430371 - 8430428
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  8430371 tgaggaattttattttttccgtcactaatttcccccgctaattttgttttttctagta 8430428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 23388434 - 23388381
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||||    
T  23388434 gaatttcattttttccgtcaccaatttccctcgctaattttgttttttctagta 23388381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23858017 - 23857961
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  23858017 tgaggaatttcattttc-ccgtcactaatttccctcgctaattttgctttttctagta 23857961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28262439 - 28262496
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||||    
T  28262439 tgaggaatttcattttttccatcactaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13613153 - 13613096
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||| ||||||| ||||    
T  13613153 tgaggaatttcatttttttcgtcactaattttcctcgctaatttttctttttccagta 13613096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26243381 - 26243324
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||| ||| || |||||||||||| ||||||||||||||||||||    
T  26243381 tgaggaattttatttttaccgccactaatttccctcgttaattttgctttttctagta 26243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41637693 - 41637750
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||||||||||    
T  41637693 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttttctagta 41637750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12860289 - 12860235
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    ||||| |||||| ||||||||||| |||||| |||| ||||||||||||||||||    
T  12860289 tgagggatttcactttttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44366057 - 44366007
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||| ||||    
T  44366057 tgaggaattttattttttctgtcattaatttccctctctaattttgttttt 44366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 4592167 - 4592098
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgta 260  Q
    ||||||||||||||||||||||| ||||||   |||||||||||||| |||  |||| | ||||||||||    
T  4592167 ctcataaaatagtacgaatcgtactatttagtcaaataaaaaacatccaaaatatccctaaaaaattgta 4592098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 26687738 - 26687693
Alignment:
Q  13 ttttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||    
T  26687738 ttttttccgtcattaatttccctccttaattttgctttatctagta 26687693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29749463 - 29749406
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||  |||||||||||||||||||||    
T  29749463 tgaggaattttatgttttccgtcacaaatttcccttcctaattttgctttttctagta 29749406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 22192260 - 22192311
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||| ||| || ||||||||||||||||||    
T  22192260 attttattttttccgtcactaatttctctccctgattttgctttttctagta 22192311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 37802433 - 37802382
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| |||||||||||||| |||||| ||| |||||||||||||| ||||||    
T  37802433 attttattttttccgtcatcaatttctctccctaattttgcttttcctagta 37802382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 35005436 - 35005394
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||    
T  35005436 ctcataaaatagtacggatcgtagtatttagcaatataaaaaa 35005394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 36550921 - 36550967
Alignment:
Q  12 attttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||| ||| ||||||||||| ||||||||| |||||||||||    
T  36550921 attttttccatcactaatttccctctctaattttgttttttctagta 36550967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 9590551 - 9590588
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattt 44  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  9590551 atttcattttttccgtcactaatttccctccctaattt 9590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27327691 - 27327748
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  ||||||| || |||||||||||||| ||||||    
T  27327691 tgaggaattttatgttttccgtcacaaatttccatccctaattttgcttttcctagta 27327748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30783413 - 30783470
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||  |||||||||||||| ||||||    
T  30783413 tgaggaattttatgttttccgtcacaaatttcccttcctaattttgcttttcctagta 30783470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 667944 - 667864
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaaga 271  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||| |||  |||  | |||||||||| ||| ||||||    
T  667944 ctcataaaataatatgaatcgtagtatttaatcaaattaaaaacatccaaaatatctcttaaaaattgtacaccggcaaga 667864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 40018882 - 40018934
Alignment:
Q  6 aatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| ||||||||||||| ||||||||||   |||||||| |||||||||||    
T  40018882 aattttattttttccgtcactaatttccctttttaattttgttttttctagta 40018934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0602 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 5143 - 5218
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccag 266  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||| |||| |||||||||||||||||||    
T  5143 ctcataaaatagtacgaatcgtagtattgaacaaaataaaaaacattcaaaacatctttcaaaaattgtataccag 5218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 39144091 - 39143996
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagatttgttattgt 286  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||| |||||||||||| || || ||| |||| ||||||||    
T  39144091 ctcataaaatagtacgaatcatagtatttaacaaaataaacaacatccaaaacatccttaaaaaattgtatatcaacaggagggattagttattgt 39143996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 14418363 - 14418440
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagca 268  Q
    |||||||||||||| |||||||||||||||| ||||||||||| |||||||  ||||||||| |||||||||||||||    
T  14418363 ctcataaaatagtatgaatcgtagtatttaataaaataaaaaatatctaaaatatccttcaacaattgtataccagca 14418440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27449163 - 27449220
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27449163 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 27449220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43329823 - 43329766
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43329823 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 43329766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48404935 - 48404992
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48404935 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 48404992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19269924 - 19269870
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19269924 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 19269870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25882645 - 25882699
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25882645 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 25882699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5261012 - 5261069
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  5261012 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 5261069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8110414 - 8110471
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8110414 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 8110471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9652653 - 9652710
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  9652653 tgaggaatttcattttttccgtcactaatttccctcgccaattttgctttttctagta 9652710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11915833 - 11915890
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  11915833 tgaggaatttcatattttccgtcactaatttccctcgctaattttgctttttctagta 11915890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13921400 - 13921457
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  13921400 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagta 13921457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18091607 - 18091550
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18091607 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttttagta 18091550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18104590 - 18104533
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18104590 tgaggaatttaattttttccgtcaataatttccctcgctaattttgctttttctagta 18104533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19223524 - 19223581
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  19223524 tgaggaatttcattttttccgtcaccaatttccctcgctaattttgctttttctagta 19223581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21816796 - 21816853
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  21816796 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 21816853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26098888 - 26098945
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  26098888 tgaggaatttcattttttccatcactaatttccctcgctaattttgctttttctagta 26098945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26390694 - 26390637
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26390694 tgaggaatttcattttttccgtcactaatttctctcgctaattttgctttttctagta 26390637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29704092 - 29704041
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29704092 tgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29236119 - 29236173
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29236119 tgagaaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 29236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 35203393 - 35203459
Alignment:
Q  206 gaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagag 272  Q
    |||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||||||||    
T  35203393 gaatcgcagtatttaacaaaataaaaaacatgcaaaacatccttcaaaaattgtatactagcaagag 35203459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8428246 - 8428303
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  8428246 tgaggaatttcattttttccgtcactaatttccctcgctaattttattttttctagta 8428303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8546320 - 8546373
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  8546320 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttct 8546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10941725 - 10941668
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  10941725 tgaggaatttcattttttccgtcactaatttcccttactaattttgctttttctagta 10941668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11219213 - 11219270
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  11219213 tgagaaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 11219270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13905098 - 13905041
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  13905098 tgaggaatttcattttttccgtcactaatttcgctctctaattttgctttttctagta 13905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17762717 - 17762774
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  17762717 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttctttctagta 17762774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18539879 - 18539932
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18539879 tgaggaatttcattttttccgtcactaatttccctctctaattttgctttttct 18539932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19064037 - 19064094
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  19064037 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttctttctagta 19064094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29956447 - 29956504
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  29956447 tgaggaatttcattttttccatcactaatttccctcgctaattttactttttctagta 29956504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30005602 - 30005659
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  30005602 tgaggaatttcattttttccatcactaatttccctcgctaattttactttttctagta 30005659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1628290 - 1628352
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtattgcc 63  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||| ||||    
T  1628290 tgaggaattttattttttccatcattaatttccctccctaattttactttttctagtaatgcc 1628352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10803795 - 10803853
Alignment:
Q  1 tgaggaatttcatttt-ttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  10803795 tgaggaatttcatttttttccgtcattaatttccctccctaatttggctttttctagta 10803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1311019 - 1310962
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||| ||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  1311019 tgaggattttcattttttccgtcactaattttccttgctaattttgctttttctagta 1310962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1745547 - 1745491
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  1745547 tgaggaatttcattttt-ccgtcactaatttccctcgctaattttgctttttttagta 1745491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3461370 - 3461313
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||||| |||| |||||||| ||||||||||||||||||||||||    
T  3461370 tgaggaattttattttttctgtcactaatttccttcgctaattttgctttttctagta 3461313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4393410 - 4393357
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  4393410 tgagaaatttcattttttccgtcactaatttccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6088288 - 6088231
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||  || ||||||||||||||||||    
T  6088288 tgaggaatttcattttttccgtcactaatttcccttacttattttgctttttctagta 6088231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7623591 - 7623534
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  7623591 tgagaaatttcattttttccgtcactaatttccctcgctgatttttctttttctagta 7623534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 11007739 - 11007686
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  11007739 gaatttcattttttccgtcactaatttcccttactaattttgctttttctagta 11007686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11837274 - 11837217
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||    
T  11837274 tgaggaatttcattttttccatcacgaatttccctcgctaattttgttttttctagta 11837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17269664 - 17269607
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||    
T  17269664 tgaggaattttattttttccatcgttaatttccatcgctaattttgctttttctagta 17269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 18380103 - 18380156
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  18380103 gaatttcattttttccgtcactgatttccctcgctaattttactttttctagta 18380156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21490094 - 21490037
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  21490094 tgagaaatttcattttttccgtcattgatttccctcactaattttgttttttctagta 21490037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11085402 - 11085345
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | | ||||| |||||||||||| ||||||||||||    
T  11085402 tgaggaatttcattttttccgttactgatttctctcgctaattttactttttctagta 11085345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23217268 - 23217211
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||| |||||| |||||    
T  23217268 tgaggaatttgattttttccctcattaatttccctccctaatttttctttttttagta 23217211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23773552 - 23773609
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||| |||||||| ||||||||||  ||||||||| |||||||||||    
T  23773552 tgaggaatttcatttcttccgtcactaatttcccttactaattttgttttttctagta 23773609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 6447305 - 6447249
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||| ||||||||| ||| ||||||||||| |||||||||||||| ||||||    
T  6447305 gaggaattttattttttccatcactaatttccctccctaattttgcttttcctagta 6447249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28859666 - 28859710
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaatttt 45  Q
    |||||||||||||||||||||||| |||||| |||||||||||||    
T  28859666 tgaggaatttcattttttccgtcactaattttcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 5565803 - 5565854
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||||||||||    
T  5565803 attttattttttccgtcactaatttccctccctgattttgctttttctagta 5565854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 20762004 - 20761953
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| || ||||||||||||||||||    
T  20762004 attttattttttccgtcactaatttccctccctgattttgctttttctagta 20761953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 21020146 - 21020197
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  21020146 attttattttttccgtcactaatttccctccctaattttgcttttcctagta 21020197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29451169 - 29451220
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||| |||||    
T  29451169 tgagaaatttcattttttccgtcactaatttccctcgttaattttgtttttt 29451220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 41410231 - 41410168
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||| ||||||||||||||| | |||||||||||||| |||  |||| |||||||||    
T  41410231 ataaaatagtatgaatcgtagtatttagccaaataaaaaacatccaaaatatccctcaaaaatt 41410168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 15501608 - 15501554
Alignment:
Q  5 gaatttcatttttt-ccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||| |||||||||||||  |||||||||||| ||||||||||||    
T  15501608 gaatttcatttttttccgtcattaatttttctcgctaattttactttttctagta 15501554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 26963304 - 26963254
Alignment:
Q  6 aatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    ||||||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  26963304 aatttcattttttacgtcactaatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50665696 - 50665646
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| || ||||||||||| |||||||||| ||||||||||||||    
T  50665696 tgaggaattttatgttttccgtcataaatttccctctctaattttgctttt 50665646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15064052 - 15063995
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  15064052 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 15063995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19610413 - 19610470
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  19610413 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 19610470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30219413 - 30219470
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  30219413 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 30219470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47263325 - 47263268
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||||| ||||  ||||||| ||| ||||||||||||||||||||    
T  47263325 tgaggaatttaattttttctgtcaccaatttccttcgttaattttgctttttctagta 47263268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 8543546 - 8543597
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| ||||||||    
T  8543546 aggaatttcattttt-ccatcactaatttccctcgctaattttgttttttcta 8543597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 11386427 - 11386467
Alignment:
Q  18 tccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagta 11386467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26830502 - 26830447
Alignment:
Q  1 tgaggaatttcatttttt-ccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||||| |||||||||    
T  26830502 tgaggaattttatttttttccgtcattaattttcctccctaatttttctttttcta 26830447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 27968996 - 27969047
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| |||| |||||||| ||||||||||| || ||||||||||||||||||    
T  27968996 attttatttgttccgtcactaatttccctccctgattttgctttttctagta 27969047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 30248028 - 30247989
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  30248028 ataaaatagtacgaatcgtagtatttagccaaataaaaaa 30247989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 31250165 - 31250220
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||| ||||||||||||| |||| | |||| |||||||||| ||||||||||    
T  31250165 aggaattttattttttccgtcactaatcttcctccctaattttgcattttctagta 31250220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 46012782 - 46012731
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| |||||| |||| || ||||||||||||||||||    
T  46012782 attttattttttccgtcactaattttcctccctgattttgctttttctagta 46012731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 10772101 - 10772051
Alignment:
Q  13 ttttttccgtcattaatttccctcgctaattttgctttttctagtattgcc 63  Q
    ||||||| |||| |||||||||||| ||||||| |||||||||||| ||||    
T  10772101 ttttttctgtcactaatttccctcgttaattttactttttctagtagtgcc 10772051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37283598 - 37283648
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| || ||||||||||  |||||||||| ||||||||||||||    
T  37283598 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 50622229 - 50622187
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||| |||||||||||||| |||||||||||| ||||||||||    
T  50622229 ctcagaaaatagtacgaattgtagtatttaaccaaataaaaaa 50622187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 6083518 - 6083477
Alignment:
Q  192 tcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||||||||| |||||||| | ||||||||||    
T  6083518 tcataaaatagtacgaatcgaagtatttagccaaataaaaaa 6083477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16299936 - 16299993
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||| ||| |||||||||||||| ||||||    
T  16299936 tgaggaattttatgttttccgtcacaaatttcgctccctaattttgcttttcctagta 16299993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 22845107 - 22845038
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgta 260  Q
    ||||||||||| ||||||| ||||||||||   |||||||||||||| |||  |||| | ||||||||||    
T  22845107 ctcataaaataatacgaattgtagtatttagtcaaataaaaaacatccaaaatatccctaaaaaattgta 22845038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 40287527 - 40287486
Alignment:
Q  15 ttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  40287527 ttttccgtctataatttcccttgctaattttgctttttctag 40287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 42096721 - 42096652
Alignment:
Q  189 atctcataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaagcatccttcaaaaatt 257  Q
    |||| |||||||||||||||||||| |||||| | |||| |||||||||| |||  |||| |||||||||    
T  42096721 atctaataaaatagtacgaatcgtaatatttagccaaataaaaaaacatccaaaatatccctcaaaaatt 42096652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46942562 - 46942619
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| |||||||| |||| |||||||| || ||||||||| |||||||||||    
T  46942562 tgagggatttaattttttctgtcactaatttccttccctaattttgatttttctagta 46942619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 2150656 - 2150628
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtattt 219  Q
    |||||||||||||||||||||||||||||    
T  2150656 ctcataaaatagtacgaatcgtagtattt 2150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 19454918 - 19454962
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaaca 235  Q
    ||||||||||| || ||||||||||||||| | ||||||||||||    
T  19454918 ctcataaaataatatgaatcgtagtatttagccaaataaaaaaca 19454962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 21088831 - 21088875
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||| ||||||||||||| ||||||||||| |||| |||||||||    
T  21088831 attttattttttccgtcactaatttccctccctaactttgctttt 21088875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 35688434 - 35688478
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaaca 235  Q
    ||||||||||| || ||||||||||||||| | ||||||||||||    
T  35688434 ctcataaaataatatgaatcgtagtatttagccaaataaaaaaca 35688478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 8168 - 8115
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8168 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 8115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 21900 - 21847
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21900 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 21847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 84382 - 84439
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  84382 tgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagta 84439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3872247 - 3872190
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3872247 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 3872190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18217908 - 18217965
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18217908 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 18217965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22486473 - 22486530
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22486473 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 22486530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23539311 - 23539368
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23539311 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 23539368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 3904537 - 3904481
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3904537 gaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 3904481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31425571 - 31425517
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31425571 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 31425517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1842973 - 1843030
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  1842973 tgaggaatttcattttttccgtcactaatttccctcgttaattttgctttttctagta 1843030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6849271 - 6849214
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  6849271 tgaggaatttcattttctccgtcactaatttccctcgctaattttgctttttctagta 6849214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7733372 - 7733315
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  7733372 tgaggaatttcattttttccgtcactaatttccctcgctaatttcgctttttctagta 7733315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11036586 - 11036643
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11036586 tgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagta 11036643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21917394 - 21917337
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  21917394 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 21917337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23232118 - 23232175
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  23232118 tgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagta 23232175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23699885 - 23699828
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  23699885 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 23699828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27806097 - 27806154
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  27806097 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagta 27806154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28800957 - 28801014
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  28800957 tgaggaatttcattttttctgtcactaatttccctcgctaattttgctttttctagta 28801014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 4912679 - 4912596
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagatt 277  Q
    |||||||| || ||||||| |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||| ||| ||||    
T  4912679 ataaaataatatgaatcgttgtatttaacaaaataataaacatctaaaacatccttcaaaaagtttataccagcaggagggatt 4912596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20174099 - 20174149
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20174099 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttt 20174149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2093422 - 2093365
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  2093422 tgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagta 2093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 9698594 - 9698541
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  9698594 gaatttcattatttccgtcactaatttccctcgctaattttgctttttctagta 9698541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20429544 - 20429601
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  20429544 tgaggaatttcattttttccgtcactaatttcccttgttaattttgctttttctagta 20429601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21623100 - 21623156
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  21623100 tgaggaatttcattttttccgtcactaatttccctcgct-attttgctttttctagta 21623156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23750796 - 23750739
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  23750796 tgagaaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 23750739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24605917 - 24605974
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  24605917 tgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagta 24605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37135345 - 37135288
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  37135345 tgaggaatttcattttttccgtcactaatttccctcactaattttgttttttctagta 37135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47523710 - 47523653
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  47523710 tgaggaatttcattttttccgtcactaatttccctcgctaattttattttttctagta 47523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 25309487 - 25309415
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtatac 263  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||  ||||||||||||||| ||||    
T  25309487 ctcataaaaaagtatgaatcgtagcatttaacaaaataaaaaacatccaaaatatccttcaaaaattgcatac 25309415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 687947 - 688002
Alignment:
Q  3 aggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  687947 aggaattttatttttttcgtcattgatttccctcgctaattttgctttttctagta 688002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 43223598 - 43223665
Alignment:
Q  196 aaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtatac 263  Q
    ||||||||| ||||| |||||||||||||||||||||||||  ||| ||||||||||||||| |||||    
T  43223598 aaaatagtatgaatcatagtatttaacaaaataaaaaacatgcaaaacatccttcaaaaattatatac 43223665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48933215 - 48933269
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  48933215 tgaggaattttattttttccgtcactaattttcctcgctaattttgctttttcta 48933269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1907434 - 1907491
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  1907434 tgagggattttattttttccgtcactaatttccctcgctaattttgcttttcctagta 1907491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2650888 - 2650831
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||    
T  2650888 tgaggaatttcattttttccgtcactaaattccctcactaatttttctttttctagta 2650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15014465 - 15014408
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||    
T  15014465 tgaggaattttattttttccgtcaccaatttccctcgctaattttactttttctagta 15014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23577249 - 23577192
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  23577249 tgaggaatttcattttttccgtcactaatttctctcgctgatttttctttttctagta 23577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21871647 - 21871704
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||| || | |||| |||||||||||||| |||||||||||    
T  21871647 tgaggaatttcattttttccgccactgattttcctcgctaattttgttttttctagta 21871704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33427769 - 33427825
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||    
T  33427769 tgaggaatttcattttttg-gtcactaatttccctcgctaattttgttttttctagta 33427825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 44300858 - 44300922
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||||||||||||||||||| | |||| |||||||||| |||  ||||||||||||||    
T  44300858 ataaaatagtacgaatcgtagtatttagccaaataaaaaaacatccaaaatatccttcaaaaatt 44300922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14786695 - 14786641
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||||| ||||||||    
T  14786695 tgaggaatttcattttttctgtcactaattttcctcactaattttgttttttcta 14786641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42926480 - 42926422
Alignment:
Q  1 tgaggaatttcatttttt-ccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||  |||||||||||    
T  42926480 tgaggaatttcatttttttccgtcactaattttcctcgctaattttattttttctagta 42926422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1824260 - 1824203
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  1824260 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 1824203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39979684 - 39979634
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| || ||||||||||  |||||||||| ||||||||||||||    
T  39979684 tgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 39979634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 40855986 - 40855944
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  40855986 ctcataaaatagtatgaatggtagtatttaaccaaataaaaaa 40855944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 45112337 - 45112379
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  45112337 ctcataaaatagtatgaatggtagtatttaaccaaataaaaaa 45112379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4514844 - 4514901
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  4514844 tgagaaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 4514901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 24430274 - 24430237
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaa 231  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  24430274 ataaaatagtatgtatcgtagtatttaacaaaataaaa 24430237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36993899 - 36993956
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || |||||| |||  |||||||||| |||||||||||||| ||||||    
T  36993899 tgaggaattttatattttccatcacaaatttccctccctaattttgcttttcctagta 36993956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38057711 - 38057768
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||| ||| |||||| ||||| | |||||||||||| |||||    
T  38057711 tgaggaattttattttttccatcactaattttcctcgttgattttgctttttgtagta 38057768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38090342 - 38090399
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| |||||||||||||  |||||||||| ||||||||||| || ||||||    
T  38090342 tgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagta 38090399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 38398406 - 38398325
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagag 272  Q
    ||||||||||| || ||| | || |||||  | |||||||||||||| |||  || |||||||||||||| |||||||||||    
T  38398406 ctcataaaatattaggaaccataatatttggccaaataaaaaacatccaaaatatacttcaaaaattgtacaccagcaagag 38398325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 38400948 - 38400867
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagag 272  Q
    ||||||||||| || ||| | || |||||  | |||||||||||||| |||  || |||||||||||||| |||||||||||    
T  38400948 ctcataaaatattaggaaccataatatttggccaaataaaaaacatccaaaatatacttcaaaaattgtacaccagcaagag 38400867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 32267438 - 32267482
Alignment:
Q  14 tttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||| |||| |||||| |||||||||| ||||||||||    
T  32267438 tttttccgtcactaatctccctccctaattttgcattttctagta 32267482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7888876 - 7888933
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7888876 tgaggaatttcattttttccgtcaataatttccctcgctaattttgctttttctagta 7888933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12045806 - 12045863
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12045806 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 12045863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36196473 - 36196530
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36196473 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 36196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38837731 - 38837674
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38837731 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctagta 38837674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 618373 - 618427
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  618373 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcta 618427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 30911 - 30988
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagca 268  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||||||| | ||||||| ||||||    
T  30911 ctcataaaagagtacgaatcgtagtatttaccaaaataaaaaacatccaaaacatccttcagatattgtattccagca 30988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 746928 - 746875
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  746928 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttct 746875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4125248 - 4125191
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  4125248 tgaggaatttcattttttccgtcactaatttccctcgctaattttactttttctagta 4125191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8108920 - 8108863
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8108920 tgaggaatttcattttttccgtcactaatttccctctctaattttgctttttctagta 8108863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16121899 - 16121842
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  16121899 tgaggaattttattttttccgtcactaatttccctcgctaattttgctttttctagta 16121842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16631934 - 16631877
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  16631934 tgaggaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 16631877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 25828390 - 25828314
Alignment:
Q  192 tcataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagca 268  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||||||    
T  25828390 tcataaaatagtatgaattgtagtatttaacaaaataaaaaacatccaaaacatccttaacaaattatataccagca 25828314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23975714 - 23975765
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgcttttt 52  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23975714 tgaggaatttcattttttccgtcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2472774 - 2472717
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  2472774 tgaggaatttcattttttccgtcactaatttccttcactaattttgctttttctagta 2472717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10494816 - 10494873
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  10494816 tgaggaatttcattttttccgtcactaatttccctcgctacatttgctttttctagta 10494873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12328286 - 12328229
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  12328286 tgaggaatttcattttttccgttactaatttccctcactaattttgctttttctagta 12328229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15061052 - 15061105
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttct 54  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  15061052 tgaggaatttcattttttcggtcactaatttccctcgctaattttgctttttct 15061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17039691 - 17039634
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  17039691 tgaggaatttcattttttccgtcactaattttcctcactaattttgctttttctagta 17039634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17772028 - 17771971
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  17772028 tgaggaatttcattttttccgtcactaatttccctcgctgatttttctttttctagta 17771971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26708645 - 26708588
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  26708645 tgaggaatttcattttttccggcactaatttccctcgctaattttgcattttctagta 26708588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26978379 - 26978322
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  26978379 tgaggaatttcattttttccggcactaatttccctcgctaattttgcattttctagta 26978322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28265535 - 28265478
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  28265535 tgaggaatttcattttttccgtcactaattttcctcgctaattttactttttctagta 28265478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36716260 - 36716203
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  36716260 tgaggaatttcattttttccatcactaatttccctcgctaattttgttttttctagta 36716203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 23141596 - 23141501
Alignment:
Q  191 ctcataaaatagtacgaa-tcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaattgtataccagcaagagagatttgttattgt 286  Q
    ||||||||| ||||| || |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||  || |||| ||||||||    
T  23141596 ctcataaaaaagtacaaaatcgtagtatttaacaaaataaaaa-catccaaaacatccttcaaaaattgtataccaacataagggattagttattgt 23141501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25652643 - 25652589
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  25652643 tgaggaatttcattttttctgtcactgatttccctcgctaattttgctttttcta 25652589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35620403 - 35620350
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  35620403 tgaggaattt-attttttccgtcactaatttccctcgctaattttgctttttcta 35620350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7003790 - 7003733
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||    
T  7003790 tgaggaattttcttttttccgtcactaatttccctcgctaattttgttttttctagta 7003733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8886911 - 8886854
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||||    
T  8886911 tgaggaatttcatttttttcgtcacaaattttcctcgctaattttgctttttctagta 8886854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13974134 - 13974081
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  13974134 gaatttcatttttttcgtcgctaatttccctcgctaattttgctttttctagta 13974081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36831950 - 36831893
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||    
T  36831950 tgaggaatttcatttttttcgtccctaatttccctcactaattttgctttttctagta 36831893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 40484128 - 40484180
Alignment:
Q  6 aatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  40484128 aatttcattatttccgtcactaatttccctcgctaatttttctttttctagta 40484180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23409059 - 23409122
Alignment:
Q  1 tgaggaatttcatttt-ttccgtcattaatttccctcgctaattttgctttttctagtattgcc 63  Q
    |||||||||||||||| |||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  23409059 tgaggaatttcatttttttccgtcactaatttttctcgctaattttgctttttctagtagtgcc 23409122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 25694644 - 25694581
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaagcatccttcaaaaatt 257  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||| ||||  |||||||||    
T  25694644 ataaaatagtacgaatcgtagtatttagccaaataaaaaacatccaaaacatcactcaaaaatt 25694581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5982724 - 5982782
Alignment:
Q  1 tgaggaatttcatttt-ttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  5982724 tgaggaattccatttttttccgtcactaatttccctcgctgattttgctttttctagta 5982782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20188001 - 20187951
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttt 51  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  20188001 tgaggaattttattttttccgtcactaatttccttcgctaattttgctttt 20187951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24138901 - 24138847
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  24138901 tgagaaatttcattttttccgtcaccaattttcctcgctaattttgctttttcta 24138847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 17986812 - 17986863
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||||||||||||| ||||||| ||| |||||||| ||||||||||    
T  17986812 gaatttcattttttccgtcactaatttctctcactaattttactttttctag 17986863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20959587 - 20959644
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| | |||| |||| |||||||| ||||||||||||    
T  20959587 tgaggaattttattttttccgtcagtgattttcctccctaattttactttttctagta 20959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 29727939 - 29727898
Alignment:
Q  17 ttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagta 29727898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33735033 - 33734976
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||| |||| ||||||||| |||||||||| |||| |||||||||||||| ||||||    
T  33735033 tgagggattttattttttccctcattaattttcctccctaattttgcttttcctagta 33734976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33818621 - 33818564
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| | |||||||||||||||||||    
T  33818621 tgaggaattttatgttttccgtcacaaatttccctccccaattttgctttttctagta 33818564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 13620181 - 13620130
Alignment:
Q  7 atttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||| ||||||||||| || ||||| ||||||||||||    
T  13620181 attttattttttccgtcactaatttccctccctgatttttctttttctagta 13620130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 38309915 - 38309980
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat--aaaaaacatctaaagcatccttcaaaaatt 257  Q
    |||||||||||||||||||| |||||| | ||||  |||||||||| |||  ||||||||||||||    
T  38309915 ataaaatagtacgaatcgtaatatttagccaaataaaaaaaacatccaaaatatccttcaaaaatt 38309980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 6311118 - 6311159
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaa 232  Q
    ||||||||||||||||||| |||||||||| | |||||||||    
T  6311118 ctcataaaatagtacgaattgtagtatttagccaaataaaaa 6311159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10420312 - 10420267
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttg 46  Q
    ||||| |||| ||||||||||||| ||||||||||| |||||||||    
T  10420312 tgagggattttattttttccgtcactaatttccctctctaattttg 10420267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 19891021 - 19890992
Alignment:
Q  26 taatttccctcgctaattttgctttttcta 55  Q
    ||||||||||||||||||||||||||||||    
T  19891021 taatttccctcgctaattttgctttttcta 19890992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 25397844 - 25397791
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  25397844 gaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 25397791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36597400 - 36597343
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||| |||||  ||| | |||||||||||||||||||    
T  36597400 tgaggaattttatgttttccgtcataaatttttctcccaaattttgctttttctagta 36597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 6277786 - 6277742
Alignment:
Q  189 atctcataaaatagtacgaatcgtagtatttaacaaaataaaaaa 233  Q
    |||| |||||||||||||||||||| |||||| | ||||||||||    
T  6277786 atctaataaaatagtacgaatcgtaatatttagccaaataaaaaa 6277742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10723 - 10668
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10723 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttctag 10668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6039 - 5982
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  6039 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7584 - 7641
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  7584 tgaggaatttcatattttccgtcactaatttccctcgctaattttgctttttctagta 7641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9289 - 9232
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  9289 tgaggaatttcattttttccgtcactaatttccctcactaattttgctttttctagta 9232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15050 - 14993
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  15050 tgaggaatttcattttttcggtcactaatttccctcgctaattttgctttttctagta 14993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19682 - 19739
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19682 tgaggaatttcattttttccgtcactaatttcccttgctaattttgctttttctagta 19739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 6878 - 6931
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6878 gaatttcattttttccgtcaataatttccctcgctaattttgctttttctagta 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12731 - 12788
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  12731 tgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttcaagta 12788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22290 - 22347
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22290 tgaggaatttcatttttttcgtcactaatttccctcgctaattttgctttttctagta 22347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17677 - 17620
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  17677 tgaggaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 219715 - 219772
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  219715 tgaggaatttcattttttccgtcactaatttccgtcgctaattttgctttttctagta 219772  T

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Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 182609 - 182666
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  182609 tgagaaatttcattttttccgtcactaatttccctcgctaattttactttttctagta 182666  T

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Target: scaffold0009; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 215723 - 215666
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  215723 tgaggaatttcattttttccgtcgctaatttctctcgctaattttgctttttttagta 215666  T

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Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3821 - 3878
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  3821 tgaggaatttcattttttccgtcactaattttcctcgctaattttgctttttctagta 3878  T

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Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 202853 - 202910
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  202853 tgagcaatttcattttttccgtcactaatttccctcgctaatttttctttttctagta 202910  T

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Target: scaffold0007; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 274721 - 274668
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  274721 gaatttcattttttccgtcactaatttccctcgctaattttgttttttctagta 274668  T

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Target: scaffold0023 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 39762 - 39706
Alignment:
Q  2 gaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  39762 gaggaatttcattttttccatcactaatttccctcgctaattttgctttttctagta 39706  T

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Target: scaffold0076 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26562 - 26619
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  26562 tgaggaatttcattttttccgtcactaatttccgtcactaattttgctttttctagta 26619  T

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Target: scaffold0062 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43996 - 44053
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  43996 tgaggaatttcattttttccatcactaatttccctcgctaatttttctttttctagta 44053  T

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Target: scaffold0035 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 74777 - 74717
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtattg 61  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  74777 tgagaaatttcattttttccgtcactaatttcccttgctaattttgccttttctagtattg 74717  T

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Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 84734 - 84678
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagt 57  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  84734 tgaggaatttcattttttctgtcactaatttccctcactaattttgctttttctagt 84678  T

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Target: scaffold0717 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 979 - 921
Alignment:
Q  1 tgaggaatttcatttttt-ccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||    
T  979 tgaggaattttatttttttccgtcagtaatttccctcgctaattttgctttttctagta 921  T

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Target: scaffold0554 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9889 - 9946
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  9889 tgagaaatttcattttttccttcactaatttcactcgctaattttgctttttctagta 9946  T

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Target: scaffold0184 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 7539 - 7596
Alignment:
Q  5 gaatttcattttttccgtcattaatttccctcgctaattttgctttttctagtattgc 62  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||    
T  7539 gaatttcattttttccgtcactaattttcctcgttaattttactttttctagtattgc 7596  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 173525 - 173578
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  173525 tgagaaatttcattttttccgtcactaattt-cctcgctaattttgctttttcta 173578  T

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Target: scaffold0087 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37847 - 37790
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| ||||||||||||| |||||||||  |||||||||| |||||||||||    
T  37847 tgaggaattttattttttccgtcactaatttcccctgctaattttgttttttctagta 37790  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 440042 - 440099
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||||||||||||||||| |||| | ||| ||||||||| ||||||||||||    
T  440042 tgaggaatttcattttttccgtcactaatattccttgctaattttactttttctagta 440099  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 58661 - 58718
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctagta 58  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||||    
T  58661 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctagta 58718  T

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Target: scaffold0069 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10237 - 10292
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttctag 56  Q
    |||||||||| || ||||||||||  |||||||||| |||||||||||||| ||||    
T  10237 tgaggaattttatgttttccgtcacaaatttccctccctaattttgcttttcctag 10292  T

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Target: scaffold0655 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3222 - 3168
Alignment:
Q  1 tgaggaatttcattttttccgtcattaatttccctcgctaattttgctttttcta 55  Q
    ||||||| || || |||||||||| ||||||||||| |||||||| |||||||||    
T  3222 tgaggaactttatcttttccgtcactaatttccctccctaatttttctttttcta 3168  T

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Target: scaffold0472 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 8014 - 8059
Alignment:
Q  197 aaatagtacgaatcgtagtatttaacaaaataaaaaacatctaaag 242  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||    
T  8014 aaatagtacgaattgtagtatttagtcaaataaaaaacatctaaag 8059  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 20172 - 20220
Alignment:
Q  194 ataaaatagtacgaatcgtagtatttaacaaaat-aaaaaacatctaaa 241  Q
    ||||||||||| |||| |||||||||||| |||| ||||||||||||||    
T  20172 ataaaatagtatgaattgtagtatttaaccaaataaaaaaacatctaaa 20220  T

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Target: scaffold0160 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 26097 - 26053
Alignment:
Q  191 ctcataaaatagtacgaatcgtagtatttaacaaaataaaaaaca 235  Q
    ||||||||||| || ||||||||||||||| | ||||||||||||    
T  26097 ctcataaaataatatgaatcgtagtatttagccaaataaaaaaca 26053  T

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