View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16091_low_9 (Length: 624)
Name: NF16091_low_9
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_low_9 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 327; Significance: 0; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 19 - 374
Target Start/End: Complemental strand, 2449330 - 2448975
Alignment:
| Q |
19 |
attttgcataaggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449330 |
attttgcataaggctttcgtgagatcctgtttccacgatcttaccattttgaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcg |
2449231 |
T |
|
| Q |
119 |
atgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaata |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449230 |
atgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaactcgttcggattcaaaatctagtgcacttgttgcttcgtctagcaata |
2449131 |
T |
|
| Q |
219 |
gaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2449130 |
gaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaata |
2449031 |
T |
|
| Q |
319 |
tacaattaccatcttaatataatcttcnnnnnnnttatataacttagcataatatc |
374 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2449030 |
tacaattaccatcttaatataatcttcaaaacaattatataacttagcataatatc |
2448975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 359 - 614
Target Start/End: Complemental strand, 2448958 - 2448703
Alignment:
| Q |
359 |
aacttagcataatatcaaaagaagctagcactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcat |
458 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2448958 |
aacttagcataatatcaaaagaagctagcactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcat |
2448859 |
T |
|
| Q |
459 |
ccacaatttcttcatatgtagcattctctcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttg |
558 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2448858 |
ccacaacatcttcatatgtagcatcctctcttccaaaaagtatattctccttaatgcttgttgcaaacaaagcaggttcttgacttactaaacccatttg |
2448759 |
T |
|
| Q |
559 |
agacctaagccacttaagttgcaacttatgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2448758 |
tgacctaagccacttaagttgcaacttatgaatagcaactccatcaagaagaatct |
2448703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 387 - 614
Target Start/End: Complemental strand, 2620338 - 2620111
Alignment:
| Q |
387 |
cactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcattctc |
486 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2620338 |
cactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcatcctc |
2620239 |
T |
|
| Q |
487 |
tcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaactta |
586 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2620238 |
tcttccaaaaagtatattctccttaatgcttgttgcaaacaaagcaggttcttgacttactaaacccatttgtgacctaagccacttaagttgcaactta |
2620139 |
T |
|
| Q |
587 |
tgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
2620138 |
tgaatagcaactccatcaagaagaatct |
2620111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 384 - 614
Target Start/End: Original strand, 2572407 - 2572637
Alignment:
| Q |
384 |
tagcactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcatt |
483 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2572407 |
tagcactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcatc |
2572506 |
T |
|
| Q |
484 |
ctctcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaac |
583 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2572507 |
ctctcttccaaaaagtatattctccttaatgcttgttgcaaacaaagcaggttcttgactcactaaacccatttgtgacctaagccacttaagttgcaac |
2572606 |
T |
|
| Q |
584 |
ttatgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |
|
|
| T |
2572607 |
ttatgaatagcaactccatcaagaagaatct |
2572637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 387 - 614
Target Start/End: Complemental strand, 2433063 - 2432836
Alignment:
| Q |
387 |
cactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcattctc |
486 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2433063 |
cactaacctgagtatcatatccttgtggcaacattgatatgaaattatgagcattggaagctttggcagcatccacaatttcttcatatgtagcatcctc |
2432964 |
T |
|
| Q |
487 |
tcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaactta |
586 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2432963 |
tcttccaaaaagtatattctccttaatgcttgttgcaaacaaagcaggttcttgacttactaaacccatttgtgacctaagccacttaagttgcaactta |
2432864 |
T |
|
| Q |
587 |
tgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
2432863 |
tgaatagcaactccatcaagaagaatct |
2432836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 387 - 614
Target Start/End: Original strand, 2677246 - 2677473
Alignment:
| Q |
387 |
cactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcattctc |
486 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
2677246 |
cactaacctgagtatcatatccttgtggcaacattgaaatgaaattatgagcattagaagctttagcagcatccacgatttcttcatatgtagcatcctc |
2677345 |
T |
|
| Q |
487 |
tcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaactta |
586 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2677346 |
tcttccaaaaagtatattctccataatgcttgttgcaaacaaagcaggttcttgacttactaaacccatttgtgacctaagccacttaagttgcaactta |
2677445 |
T |
|
| Q |
587 |
tgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
2677446 |
tgaatagcaactccatcaagaagaatct |
2677473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 388 - 614
Target Start/End: Original strand, 2599989 - 2600215
Alignment:
| Q |
388 |
actaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcattctct |
487 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
2599989 |
actaacctgagtatcatatacttgtggcaacaatgaaatgaaattatgagcattagaagttttagcagcattcacaatttcttcatatgtagcatcctct |
2600088 |
T |
|
| Q |
488 |
cttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaacttat |
587 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2600089 |
cttccaaaaagtatattctccttaatgcttgttgcaaacaaagcaggttcttgacttactaaacccatttgtgacctaagccacttaagttgcaacttat |
2600188 |
T |
|
| Q |
588 |
gaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
||||||||||||||||||||| ||||| |
|
|
| T |
2600189 |
gaatagcaactccatcaagaagaatct |
2600215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 381 - 614
Target Start/End: Original strand, 2644802 - 2645035
Alignment:
| Q |
381 |
agctagcactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagc |
480 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |
|
|
| T |
2644802 |
agctagcactaacctgcgtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaaactttagcagcatctacaacatcttcatatgtagc |
2644901 |
T |
|
| Q |
481 |
attctctcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgc |
580 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2644902 |
atcctctcttccaaaaagtatattctccttaatgcttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccactgaagttgc |
2645001 |
T |
|
| Q |
581 |
aacttatgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||| |
|
|
| T |
2645002 |
aacttatgaatggcaactccatcaagaagaatct |
2645035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 387 - 614
Target Start/End: Complemental strand, 2586648 - 2586421
Alignment:
| Q |
387 |
cactaacctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcattctc |
486 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||| |
|
|
| T |
2586648 |
cactaacctgagtatcatatccttgtggcaacattgaaatgaaattatgagcattagaagctttagcagcatccacaacatcttcaaatgtagcatcctc |
2586549 |
T |
|
| Q |
487 |
tcttccaaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaactta |
586 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2586548 |
tcttccaaaaagtatattctccttgatgcttgttgcaaacaaagcaggttcttgactcactaaacccatttgtgacctaagccacttaagttgcaactta |
2586449 |
T |
|
| Q |
587 |
tgaatagcaactccatcaagaataatct |
614 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
2586448 |
tgaatagcaactccatcaagaagaatct |
2586421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 19 - 333
Target Start/End: Complemental strand, 2436151 - 2435837
Alignment:
| Q |
19 |
attttgcataaggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcg |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| | ||||||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
2436151 |
attttgcatgaggctttcgtgagatcctgtttccatgatcttaccattttgaacaactgcaatgatgtctgcattttggatggtggataagcggtgagcg |
2436052 |
T |
|
| Q |
119 |
atgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaata |
218 |
Q |
| |
|
||||| |||||||||||| ||||| ||||| || | |||||||||||||||| |||| |||||| |||| || ||||||||||||||||||||||||| |
|
|
| T |
2436051 |
atgatgatggtggtgcgtccaactacagctttgtctagagcttcttggacaactcgttcagattcagaatcgagagcacttgttgcttcgtctagcaata |
2435952 |
T |
|
| Q |
219 |
gaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaata |
318 |
Q |
| |
|
||||| |||| |||| | ||||||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||| ||| | |
|
|
| T |
2435951 |
gaatttttggcatttttactatggctcttgcaatggcaatcctttgcttttgtcccccagacatttgaattcccctctccccaacctgtagtaataagca |
2435852 |
T |
|
| Q |
319 |
tacaattaccatctt |
333 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
2435851 |
tacaattaacatctt |
2435837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 317
Target Start/End: Complemental strand, 2621548 - 2621250
Alignment:
| Q |
19 |
attttgcataaggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcg |
118 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||| ||||| ||||||||| ||| | |||||||| |||||| || ||||||||||||||||||||| |
|
|
| T |
2621548 |
attttgcatgaggctttcatgagatcctgtttccgcgatcataccattttgaacaaccgcaatgatgtctgcattttgaatggtggataagcggtgagcg |
2621449 |
T |
|
| Q |
119 |
atgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaata |
218 |
Q |
| |
|
||||| |||||||||||| |||| |||||||| || |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| | |
|
|
| T |
2621448 |
atgatgatggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactctttcggattcagaatctagtgcacttgttgcttcatctagcaaaa |
2621349 |
T |
|
| Q |
219 |
gaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaat |
317 |
Q |
| |
|
||||| |||| |||| || || ||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
2621348 |
gaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgccccccagacatttgaactcctctctccccaacctgcagtagtaaat |
2621250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 19 - 333
Target Start/End: Original strand, 2571470 - 2571784
Alignment:
| Q |
19 |
attttgcataaggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcg |
118 |
Q |
| |
|
||||||||| ||||| ||||||||||| |||||| || | |||||||| ||||| ||||| || |||||| || |||||| ||||||||||||||| |
|
|
| T |
2571470 |
attttgcatgaggctatcgtgagatcccatttccatgaccagaccattttgaacgaccgcaataatgtctgcattttggatggtagataagcggtgagcg |
2571569 |
T |
|
| Q |
119 |
atgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaata |
218 |
Q |
| |
|
||||| |||||||| ||| |||||| ||||| || | |||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||| ||||| |
|
|
| T |
2571570 |
atgatgatggtggttcgtccaactgcagctttgtctagagcttcttggacgactcgttcggattcagaatcgagtgcacttgttgcttcgtctaacaata |
2571669 |
T |
|
| Q |
219 |
gaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaata |
318 |
Q |
| |
|
||||| |||| |||| || |||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | |
|
|
| T |
2571670 |
gaatttttggcatttttatgatggctcttgcaattgcaattctttgcttttgtccccctgacatttgaactcccctctccccaacctgtagtagtaaaca |
2571769 |
T |
|
| Q |
319 |
tacaattaccatctt |
333 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
2571770 |
tacaattaacatctt |
2571784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 19 - 316
Target Start/End: Original strand, 2674961 - 2675258
Alignment:
| Q |
19 |
attttgcataaggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcg |
118 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||| |||||||||||||| || | ||||||||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
2674961 |
attttgcatgaggctttcgtgagatcccgtttccatgatcttaccattttggacaactgcaatgatgtctgcattttggatggttgataagcggtgagcg |
2675060 |
T |
|
| Q |
119 |
atgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaata |
218 |
Q |
| |
|
||||| |||||||||||| |||| | ||||| || | ||||||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||| |||| |
|
|
| T |
2675061 |
atgatgatggtggtgcgtccaaccgccgctttgtctagagcttcttgaacaactcgttcggattcagaatcaagtgcacttgttgcttcatctagtaata |
2675160 |
T |
|
| Q |
219 |
gaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaa |
316 |
Q |
| |
|
|||| | || |||| ||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||| ||||||||||||| ||||| |||| |
|
|
| T |
2675161 |
aaattttaggcatttttattatggctcttgcaatggcaatcctttgtttttgtccccctgacatctgaactcctctctccccaacctgtagtaataaa |
2675258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 29 - 316
Target Start/End: Complemental strand, 2589971 - 2589684
Alignment:
| Q |
29 |
aggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcgatgataatgg |
128 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||| ||| | ||||||||| |||||| || |||||| |||| ||||||||||||||| |||| |
|
|
| T |
2589971 |
aggctttcgtgagatcctatttccataatcttaccattttgaacaactgcaatgatgtctgcattttggatggtagataggcggtgagcgatgatgatgg |
2589872 |
T |
|
| Q |
129 |
tggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaatagaattcttgg |
228 |
Q |
| |
|
|||||||| |||| || ||||| || | ||||||||||||||| ||| |||||| |||| ||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
2589871 |
tggtgcgtccaacggtagctttgtctagagcttcttggacaaccctttctgattcagaatcgagtgcacttgttgcttcatctagcaatagaatttttgg |
2589772 |
T |
|
| Q |
229 |
atttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaa |
316 |
Q |
| |
|
|||| || || ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| | ||||| |||||||||| |
|
|
| T |
2589771 |
catttttatgatagctcttgcaatggcaatcctttgcttttgcccccctgacatttgtactcctctctctctaacctgtagtagtaaa |
2589684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 97 - 333
Target Start/End: Original strand, 2598301 - 2598537
Alignment:
| Q |
97 |
gatggtggataagcggtgagcgatgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgca |
196 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||||||||| |||||| ||||| || | |||||||||||| ||| ||||||||||| |||| |||||| |
|
|
| T |
2598301 |
gatggtagataatcggtgagcgatgatgatggtggtgcgtccaactgaagctttgtctagagcttcttggacgactcgttcggattcagaatcgagtgca |
2598400 |
T |
|
| Q |
197 |
cttgttgcttcgtctagcaatagaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctct |
296 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| |||| || |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2598401 |
cttgttgcttcgtctaacaatagaatttttggcatttttatgatggctcttgcaattgcaattctttgcttttgtccccctgacatttgtactcccctct |
2598500 |
T |
|
| Q |
297 |
ccccaacctatagtagtaaatatacaattaccatctt |
333 |
Q |
| |
|
||||||||| |||||||||| || ||||| |||||| |
|
|
| T |
2598501 |
ccccaacctgtagtagtaaacatgtaattaacatctt |
2598537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 29 - 326
Target Start/End: Original strand, 2643122 - 2643419
Alignment:
| Q |
29 |
aggctttcgtgagatcctgtttccacgatcttaccatttttaacgattgcaatgatatctgcagttctgatggtggataagcggtgagcgatgataatgg |
128 |
Q |
| |
|
|||||||| |||| ||||||||||| ||||| ||||||| || | ||||||||| || ||| || ||||||||||| ||| ||||||||||| |||| |
|
|
| T |
2643122 |
aggctttcatgagttcctgtttccattatcttgccattttgaaacactgcaatgatgtcagcattttggatggtggataggcgatgagcgatgatgatgg |
2643221 |
T |
|
| Q |
129 |
tggtgcgttcaactgtggctttctcaaaagcttcttggacaacttgttcggattcaaaatctagtgcacttgttgcttcgtctagcaatagaattcttgg |
228 |
Q |
| |
|
| |||||| |||||| | |||| || | ||| |||||||||| | ||||||||||| |||| ||||||||||| |||||||| | ||||| |||| | || |
|
|
| T |
2643222 |
ttgtgcgtccaactgcgactttgtctagagcgtcttggacaattcgttcggattcagaatcaagtgcacttgtcgcttcgtccaacaataaaattttagg |
2643321 |
T |
|
| Q |
229 |
atttttgattatggctcttgcaatggaaatcctttgcttttgtccccctgacatttgtactcccctctccccaacctatagtagtaaatatacaatta |
326 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||||||| || |||||| |
|
|
| T |
2643322 |
catttttattatggctcttgcaatggcaatcctttgtttttgcccccctgacatttgaactcctctctccccaacctgtagtagtaaacatgcaatta |
2643419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 33788367 - 33788455
Alignment:
| Q |
191 |
agtgcacttgttgcttcgtctagcaatagaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccctga |
279 |
Q |
| |
|
|||||||| |||||||| || |||| |||||| ||||||||| || || ||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
33788367 |
agtgcactagttgcttcatcaagcagaagaattactggattttttatgatagctcttgcaatggctattctttgcttttgtcctcctga |
33788455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 2588478 - 2588432
Alignment:
| Q |
363 |
tagcataatatcaaaagaagctagcactaacctgagtatcatatcct |
409 |
Q |
| |
|
||||||||||||||||||| ||| | ||||| ||||||||||||||| |
|
|
| T |
2588478 |
tagcataatatcaaaagaaactacccctaacatgagtatcatatcct |
2588432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 392 - 607
Target Start/End: Original strand, 17872589 - 17872804
Alignment:
| Q |
392 |
acctgagtatcatatccttgtggcaacaatgaaatgaaattatgagcattggaagctttagcagcatccacaatttcttcatatgtagcattctctcttc |
491 |
Q |
| |
|
|||||||||| || ||||| || | ||| |||||||||| ||||||||| || ||| ||||| || ||||| || || | ||||||| ||| | | |
|
|
| T |
17872589 |
acctgagtattgtaaccttgaggaagcaaagaaatgaaatcatgagcattacaaattttcgcagcttcaacaatctcatcttcggtagcatcttctttac |
17872688 |
T |
|
| Q |
492 |
caaaaagtatattctccttaatacttgttgcaaacaaagcaggttcttgacttactaaacccatttgagacctaagccacttaagttgcaacttatgaat |
591 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||||||| ||||||||||||||||| || || ||||| ||||||||||| |||| ||||| ||| |||| |
|
|
| T |
17872689 |
caaaaattatattctctttaatgcttgttgcaaataaagcaggttcttgactaaccaaccccatcattgacctaagccatttaatctgcaagttacgaat |
17872788 |
T |
|
| Q |
592 |
agcaactccatcaaga |
607 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
17872789 |
agctactccatcaaga |
17872804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 5823595 - 5823515
Alignment:
| Q |
193 |
tgcacttgttgcttcgtctagcaatagaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtcc |
273 |
Q |
| |
|
||||||||||||||| || || | || ||||||||||| || | |||||| |||||||| | ||| |||||||||||||| |
|
|
| T |
5823595 |
tgcacttgttgcttcatcaagaagaaggattcttggattcttcaatatggcccttgcaattgcaattctttgcttttgtcc |
5823515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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