View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16091_low_98 (Length: 305)
Name: NF16091_low_98
Description: NF16091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16091_low_98 |
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Alignment Details
Target: chr6 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 21 - 289
Target Start/End: Complemental strand, 2128542 - 2128274
Alignment:
| Q |
21 |
agtgaaaacaacggggttgggtctagcagaatgaactagattttcacaacataacgaatcatgattttaattttagttaaaagagatgtttacatttagt |
120 |
Q |
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| T |
2128542 |
agtgaaaacaacggggttgggtctagcataatgaactagattttcacaacataacgaatcatgattttaattttgattaaaagagatgtttacatttagt |
2128443 |
T |
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| Q |
121 |
gtccgacactttcaaattagattgttgctttggaaggaatctaaggctatgtacattgtccgaaattatagtgcaaaagttaacaaatttttagcaaaat |
220 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
2128442 |
gtccgacactttcaaattagattgttgctttggaaagaatctaaggctacgtacattgtccgaaattatagtgcaaaagttaacaaatttttagcagaat |
2128343 |
T |
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| Q |
221 |
gagaaccagattaacaatattatgagtgcaacaaaatgtaaggaaacaaattgaaagtgccctaaagta |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2128342 |
gagaaccagattaacaatattatgagtgcaacaaaatgtaaggaaacaaattgaaagtgccctaaagta |
2128274 |
T |
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