View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16093_high_22 (Length: 227)
Name: NF16093_high_22
Description: NF16093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16093_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 41940559 - 41940338
Alignment:
| Q |
1 |
tcaaaacaggtgaggttaatttaaggttatttagtgttattaaatgaaacatgag--ttattacctttgatacaccttttccaaggtagtcagatcctcc |
98 |
Q |
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| T |
41940559 |
tcaaaacaggtgaggttaatttaaggttatttagtgttattaaatgaaacatgagagttattacctttgatacaccttttccaaggtagtcagatcctcc |
41940460 |
T |
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| Q |
99 |
atctcttaactcaagagcctcgtaaatacctaataatttatttcaacaataaaattaatcggtgtttaacatgtataattcaagtatgcaagccacctac |
198 |
Q |
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| T |
41940459 |
atctcttaactcaagagcctcgtaaatacctaataatttatttcaaaaataaaattaatcggtgtttaacatgtataattcaagcatgcaagccacctac |
41940360 |
T |
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| Q |
199 |
ataaatatccatggatgcaaaa |
220 |
Q |
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||||||||||||||||||||| |
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| T |
41940359 |
gtaaatatccatggatgcaaaa |
41940338 |
T |
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