View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16093_high_9 (Length: 377)
Name: NF16093_high_9
Description: NF16093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16093_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 29 - 356
Target Start/End: Original strand, 36439032 - 36439359
Alignment:
| Q |
29 |
tttcaagcaaaaaaggagagtacctacccaattcatgcttatccacacgtacatacaaatcttgtccaacttgtgtgtaagtcctagtatcctccaaatc |
128 |
Q |
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| T |
36439032 |
tttcaagcaaaaaaggagagtacctacccaattcatgcttatccacacgtacatacaaatcttgtccaacttgtgtgtaagtcctagtatcctccaaatc |
36439131 |
T |
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| Q |
129 |
accatgccaagtaacacacccactttgcaacatctcattttcacttgtaaatgcaacacaagagcaatcccctaaacacatctctctacactccttcaat |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36439132 |
accatgccaagtaacacacccactttgcaacatctcattttcacttgtaaatgcaacacaagagcaatcccctaaacacatctctctacactccttcaat |
36439231 |
T |
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| Q |
229 |
cccaaactctcgttcacacgtgtcattgaagtatttggcaccttcacacgtaccactttcacaaacccttccccatttcgacacgtggacacattcgact |
328 |
Q |
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||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36439232 |
cccaaactctcattcacacgtgtcattgaagtattcggcaccttcacacgtgccactttcacaaacccttccccatttcgacacgtggacacattcgact |
36439331 |
T |
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| Q |
329 |
tcctcacacacccacccgacccatctct |
356 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
36439332 |
tcctcacacacccacccgacccatctct |
36439359 |
T |
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