View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16093_low_3 (Length: 663)

Name: NF16093_low_3
Description: NF16093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16093_low_3
NF16093_low_3
[»] chr7 (49 HSPs)
chr7 (19-353)||(8346701-8347031)
chr7 (378-663)||(8346375-8346660)
chr7 (371-663)||(8329888-8330179)
chr7 (375-663)||(8343646-8343930)
chr7 (139-325)||(8330202-8330391)
chr7 (142-325)||(8343957-8344147)
chr7 (373-663)||(24725316-24725609)
chr7 (376-663)||(4247356-4247641)
chr7 (376-635)||(44944717-44944978)
chr7 (375-660)||(14055250-14055539)
chr7 (375-660)||(14365278-14365567)
chr7 (377-663)||(5058530-5058813)
chr7 (375-663)||(27221417-27221699)
chr7 (376-663)||(5715290-5715570)
chr7 (404-663)||(17811375-17811633)
chr7 (376-565)||(24990012-24990200)
chr7 (375-560)||(26281256-26281439)
chr7 (374-525)||(9685224-9685375)
chr7 (375-660)||(7730206-7730472)
chr7 (19-124)||(8330415-8330520)
chr7 (19-119)||(8344183-8344283)
chr7 (446-663)||(20570729-20570944)
chr7 (376-520)||(22687649-22687793)
chr7 (385-652)||(11324988-11325252)
chr7 (375-514)||(39182259-39182397)
chr7 (376-514)||(11326386-11326524)
chr7 (383-500)||(8571250-8571367)
chr7 (376-660)||(21846294-21846554)
chr7 (375-567)||(26617415-26617606)
chr7 (397-534)||(27509914-27510051)
chr7 (376-663)||(6916786-6917063)
chr7 (577-663)||(8329823-8329909)
chr7 (577-660)||(8346313-8346396)
chr7 (416-514)||(1977692-1977790)
chr7 (374-468)||(21157811-21157905)
chr7 (513-663)||(26565392-26565540)
chr7 (579-660)||(39182357-39182438)
chr7 (576-663)||(24989618-24989704)
chr7 (372-462)||(8630001-8630091)
chr7 (376-471)||(30294175-30294267)
chr7 (375-470)||(26565663-26565758)
chr7 (576-663)||(30294444-30294531)
chr7 (380-449)||(4574475-4574544)
chr7 (576-663)||(8572336-8572422)
chr7 (543-659)||(27509260-27509374)
chr7 (474-514)||(8329867-8329907)
chr7 (616-663)||(8304324-8304371)
chr7 (474-514)||(8346354-8346394)
chr7 (579-619)||(9685235-9685275)
[»] chr4 (34 HSPs)
chr4 (375-660)||(5361812-5362093)
chr4 (398-659)||(9911259-9911518)
chr4 (378-663)||(5375666-5375950)
chr4 (375-565)||(13023566-13023758)
chr4 (374-663)||(10142897-10143185)
chr4 (376-663)||(9770112-9770397)
chr4 (375-663)||(36120823-36121108)
chr4 (375-564)||(8889227-8889415)
chr4 (377-660)||(17466080-17466361)
chr4 (374-525)||(13551602-13551753)
chr4 (374-663)||(23064805-23065094)
chr4 (375-568)||(37240261-37240448)
chr4 (376-509)||(8011212-8011345)
chr4 (377-470)||(7044728-7044821)
chr4 (372-469)||(24719513-24719610)
chr4 (375-480)||(18459733-18459838)
chr4 (527-663)||(24719725-24719860)
chr4 (376-470)||(4156763-4156857)
chr4 (513-663)||(8010980-8011129)
chr4 (380-480)||(7815561-7815661)
chr4 (580-663)||(6346799-6346882)
chr4 (374-481)||(6347088-6347195)
chr4 (374-456)||(7452418-7452499)
chr4 (576-663)||(7044961-7045048)
chr4 (520-663)||(9149566-9149709)
chr4 (590-663)||(37240450-37240524)
chr4 (376-449)||(9149791-9149864)
chr4 (613-663)||(55476223-55476273)
chr4 (474-511)||(4157053-4157090)
chr4 (440-480)||(7803070-7803110)
chr4 (579-619)||(13551613-13551653)
chr4 (372-448)||(18327339-18327415)
chr4 (372-448)||(18437982-18438058)
chr4 (397-441)||(46664421-46664465)
[»] chr8 (34 HSPs)
chr8 (372-663)||(11879596-11879885)
chr8 (372-663)||(11897012-11897301)
chr8 (373-663)||(15294667-15294954)
chr8 (373-663)||(15475036-15475323)
chr8 (375-663)||(5922048-5922333)
chr8 (375-564)||(31424162-31424350)
chr8 (372-660)||(29384159-29384449)
chr8 (376-663)||(17646993-17647282)
chr8 (376-663)||(45403029-45403314)
chr8 (378-663)||(19704301-19704583)
chr8 (425-658)||(23142224-23142454)
chr8 (371-562)||(22910146-22910336)
chr8 (415-660)||(6810861-6811101)
chr8 (380-564)||(3094185-3094378)
chr8 (375-564)||(27836406-27836594)
chr8 (372-663)||(7489127-7489417)
chr8 (397-659)||(32424356-32424615)
chr8 (375-479)||(24056594-24056698)
chr8 (380-566)||(6292282-6292467)
chr8 (375-451)||(477101-477177)
chr8 (465-559)||(9212202-9212295)
chr8 (375-471)||(15761473-15761569)
chr8 (543-658)||(15761207-15761322)
chr8 (576-649)||(8582241-8582314)
chr8 (377-421)||(9036757-9036801)
chr8 (375-423)||(23136348-23136396)
chr8 (593-663)||(17566313-17566383)
chr8 (397-514)||(15231745-15231862)
chr8 (578-663)||(24056414-24056499)
chr8 (579-619)||(22910193-22910233)
chr8 (579-619)||(31424261-31424301)
chr8 (592-658)||(22910052-22910118)
chr8 (577-663)||(24414131-24414217)
chr8 (579-619)||(9212246-9212286)
[»] chr5 (22 HSPs)
chr5 (376-663)||(43234868-43235153)
chr5 (377-663)||(18843716-18844000)
chr5 (375-663)||(19578941-19579228)
chr5 (375-660)||(21059003-21059285)
chr5 (377-663)||(23172272-23172560)
chr5 (372-635)||(18051405-18051663)
chr5 (384-663)||(27340031-27340307)
chr5 (376-660)||(38158111-38158383)
chr5 (375-542)||(22645681-22645849)
chr5 (397-660)||(41688513-41688772)
chr5 (425-568)||(19979648-19979790)
chr5 (425-663)||(20320992-20321228)
chr5 (376-501)||(20923718-20923843)
chr5 (380-449)||(24106645-24106714)
chr5 (378-450)||(19042444-19042516)
chr5 (378-442)||(20320926-20320990)
chr5 (520-663)||(26021464-26021604)
chr5 (616-663)||(41427657-41427704)
chr5 (475-517)||(19042406-19042448)
chr5 (613-663)||(19377838-19377888)
chr5 (476-514)||(43005747-43005785)
chr5 (579-619)||(19979697-19979737)
[»] chr1 (37 HSPs)
chr1 (376-663)||(23528656-23528941)
chr1 (372-663)||(16125299-16125591)
chr1 (375-663)||(13100190-13100475)
chr1 (374-663)||(9954877-9955166)
chr1 (375-663)||(25146612-25146898)
chr1 (373-605)||(9327116-9327347)
chr1 (375-663)||(9351907-9352193)
chr1 (375-661)||(18304657-18304941)
chr1 (372-663)||(21846118-21846401)
chr1 (376-630)||(13276143-13276395)
chr1 (378-663)||(19009792-19010073)
chr1 (377-566)||(42180005-42180193)
chr1 (378-660)||(12513283-12513553)
chr1 (376-568)||(9128778-9128969)
chr1 (475-660)||(47785958-47786140)
chr1 (374-514)||(41032661-41032801)
chr1 (377-663)||(17869594-17869873)
chr1 (465-658)||(32881416-32881600)
chr1 (373-509)||(17055995-17056131)
chr1 (376-451)||(30619075-30619150)
chr1 (374-480)||(18337547-18337652)
chr1 (376-471)||(14074404-14074499)
chr1 (576-663)||(16434709-16434794)
chr1 (453-557)||(18228278-18228380)
chr1 (376-463)||(12800623-12800710)
chr1 (576-663)||(17055763-17055850)
chr1 (375-442)||(34478833-34478900)
chr1 (579-659)||(41032621-41032701)
chr1 (374-421)||(47785790-47785837)
chr1 (593-663)||(14074327-14074397)
chr1 (387-468)||(8772715-8772796)
chr1 (375-468)||(24117006-24117099)
chr1 (379-462)||(27917495-27917578)
chr1 (592-659)||(30619156-30619223)
chr1 (434-468)||(27502239-27502273)
chr1 (579-619)||(9128831-9128871)
chr1 (579-619)||(9327206-9327246)
[»] scaffold0186 (1 HSPs)
scaffold0186 (372-663)||(8439-8726)
[»] chr6 (40 HSPs)
chr6 (376-663)||(15527954-15528239)
chr6 (375-660)||(23897810-23898092)
chr6 (375-660)||(30912253-30912542)
chr6 (373-663)||(17543574-17543872)
chr6 (376-663)||(26053140-26053425)
chr6 (376-663)||(26073193-26073478)
chr6 (375-663)||(7223518-7223800)
chr6 (376-602)||(17250057-17250280)
chr6 (375-663)||(19748332-19748618)
chr6 (372-663)||(17103198-17103480)
chr6 (422-565)||(21354786-21354928)
chr6 (375-641)||(10508883-10509153)
chr6 (398-542)||(22498848-22498992)
chr6 (374-501)||(6943464-6943591)
chr6 (375-514)||(27233268-27233407)
chr6 (375-544)||(11327532-11327701)
chr6 (376-544)||(7918342-7918510)
chr6 (379-535)||(2912218-2912373)
chr6 (375-468)||(18491074-18491167)
chr6 (375-455)||(5422798-5422878)
chr6 (510-663)||(7918194-7918343)
chr6 (397-471)||(4841953-4842025)
chr6 (378-453)||(3573984-3574059)
chr6 (576-663)||(4841673-4841760)
chr6 (577-663)||(2912105-2912191)
chr6 (576-663)||(11327406-11327493)
chr6 (576-663)||(22498284-22498371)
chr6 (375-453)||(10958239-10958317)
chr6 (375-480)||(12245108-12245213)
chr6 (403-468)||(18490998-18491063)
chr6 (379-468)||(27890137-27890225)
chr6 (576-663)||(3573744-3573831)
chr6 (403-468)||(18490922-18490987)
chr6 (579-620)||(27233267-27233308)
chr6 (379-468)||(33583766-33583855)
chr6 (401-468)||(8285760-8285827)
chr6 (498-554)||(27614594-27614651)
chr6 (399-444)||(7359871-7359916)
chr6 (383-440)||(8545030-8545087)
chr6 (579-619)||(17250155-17250195)
[»] chr2 (31 HSPs)
chr2 (372-663)||(31237820-31238110)
chr2 (377-659)||(35565802-35566082)
chr2 (375-660)||(15588702-15588979)
chr2 (372-663)||(1404779-1405068)
chr2 (374-544)||(30432417-30432587)
chr2 (374-663)||(36429846-36430133)
chr2 (378-567)||(31578007-31578194)
chr2 (375-663)||(20063713-20064008)
chr2 (375-505)||(23863321-23863451)
chr2 (459-660)||(1690575-1690774)
chr2 (378-509)||(25539222-25539353)
chr2 (376-502)||(19491855-19491982)
chr2 (375-471)||(1690796-1690892)
chr2 (375-471)||(5395682-5395778)
chr2 (373-481)||(15266079-15266187)
chr2 (376-470)||(16766710-16766804)
chr2 (513-663)||(16766922-16767070)
chr2 (404-468)||(34841584-34841648)
chr2 (543-663)||(13502517-13502637)
chr2 (412-471)||(31023259-31023318)
chr2 (543-663)||(19262160-19262279)
chr2 (513-663)||(25538989-25539138)
chr2 (513-663)||(27406927-27407076)
chr2 (372-471)||(17995051-17995150)
chr2 (372-455)||(19245149-19245232)
chr2 (576-663)||(30433013-30433100)
chr2 (375-461)||(24473335-24473420)
chr2 (474-514)||(13502561-13502601)
chr2 (375-463)||(27750194-27750282)
chr2 (475-514)||(16766987-16767026)
chr2 (397-454)||(15516610-15516667)
[»] chr3 (44 HSPs)
chr3 (374-663)||(28745768-28746061)
chr3 (375-542)||(29067283-29067450)
chr3 (374-658)||(39427900-39428183)
chr3 (375-656)||(8155980-8156261)
chr3 (374-663)||(24620041-24620334)
chr3 (376-660)||(22137278-22137559)
chr3 (449-659)||(42696920-42697129)
chr3 (381-663)||(17064326-17064592)
chr3 (377-525)||(3449272-3449419)
chr3 (376-525)||(20756039-20756188)
chr3 (385-568)||(21963438-21963620)
chr3 (385-568)||(21985874-21986056)
chr3 (376-502)||(30727694-30727820)
chr3 (397-563)||(22494731-22494889)
chr3 (375-480)||(27676355-27676460)
chr3 (465-567)||(15515195-15515296)
chr3 (373-522)||(25870350-25870508)
chr3 (375-525)||(22356032-22356183)
chr3 (376-470)||(24649724-24649818)
chr3 (375-468)||(15806543-15806635)
chr3 (576-663)||(27676634-27676721)
chr3 (373-472)||(17796374-17796473)
chr3 (373-472)||(19104814-19104913)
chr3 (398-480)||(10872971-10873053)
chr3 (533-660)||(25870169-25870294)
chr3 (576-663)||(6136413-6136500)
chr3 (576-663)||(13286142-13286229)
chr3 (377-455)||(28135723-28135801)
chr3 (576-662)||(28135960-28136046)
chr3 (373-472)||(17796265-17796364)
chr3 (373-472)||(17796483-17796582)
chr3 (373-472)||(19104705-19104804)
chr3 (373-472)||(19104923-19105022)
chr3 (543-663)||(20756188-20756307)
chr3 (576-660)||(3449157-3449241)
chr3 (576-658)||(29067475-29067557)
chr3 (376-468)||(13005927-13006019)
chr3 (474-514)||(27676637-27676677)
chr3 (380-424)||(42696870-42696914)
chr3 (576-663)||(10872559-10872646)
chr3 (474-514)||(6136457-6136497)
chr3 (474-514)||(13286145-13286185)
chr3 (619-663)||(22971050-22971094)
chr3 (474-514)||(25870210-25870250)
[»] scaffold0417 (1 HSPs)
scaffold0417 (375-663)||(7299-7585)
[»] scaffold0042 (1 HSPs)
scaffold0042 (375-663)||(93549-93834)
[»] scaffold0510 (2 HSPs)
scaffold0510 (375-514)||(91-231)
scaffold0510 (579-660)||(51-131)
[»] scaffold0603 (2 HSPs)
scaffold0603 (513-663)||(8803-8952)
scaffold0603 (372-455)||(9070-9153)
[»] scaffold0048 (4 HSPs)
scaffold0048 (375-468)||(48825-48918)
scaffold0048 (578-663)||(48506-48591)
scaffold0048 (578-663)||(61158-61243)
scaffold0048 (416-470)||(61418-61472)
[»] scaffold0016 (2 HSPs)
scaffold0016 (576-663)||(56269-56356)
scaffold0016 (497-541)||(58746-58790)
[»] scaffold0036 (1 HSPs)
scaffold0036 (375-480)||(37191-37296)
[»] scaffold0115 (1 HSPs)
scaffold0115 (376-461)||(35103-35188)
[»] scaffold0534 (1 HSPs)
scaffold0534 (593-663)||(885-955)
[»] scaffold1892 (1 HSPs)
scaffold1892 (414-479)||(886-951)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 19 - 353
Target Start/End: Complemental strand, 8347031 - 8346701
Alignment:
Q  19 gctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattttc 118  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8347031 gctatatgccatggaagggaggtaaaagaaagggagcacattgagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattttc 8346932  T
Q  119 ataatgnnnnnnnnnnnnnnagggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaacttgttac 218  Q
    ||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8346931 ataatgttttttttttt---agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaaattgttac 8346835  T
Q  219 tttgattttattacaatataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgctttaaacttgtt 318  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  8346834 tttgattttattacaatataat-ttttcaaacctttagtttgattattattattatcttatagtgttaaagtttatgataatggttgcattaaacttgtt 8346736  T
Q  319 aattaaaccattgttgtcaaaatcctttactttgg 353  Q
    |||||||||||||||||||||||||||||||||||    
T  8346735 aattaaaccattgttgtcaaaatcctttactttgg 8346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 378 - 663
Target Start/End: Complemental strand, 8346660 - 8346375
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 477  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  478 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 577  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||       ||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatatatttagtattattatttttttgg 8346461  T
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||    
T  8346460 taaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgatt 8346375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 371 - 663
Target Start/End: Complemental strand, 8330179 - 8329888
Alignment:
Q  371 aaatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8330179 aaatcattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaata 8330080  T
Q  471 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagta-ttattan 569  Q
    | |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||      
T  8330079 ggaaaaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatatacttattatttatt-- 8329982  T
Q  570 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
          ||||||||||||||||||||||||| |||| | |||||||||||||||||||||| |||| || ||||||||||||| ||||||||||    
T  8329981 ttttttggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgatt 8329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 375 - 663
Target Start/End: Complemental strand, 8343930 - 8343646
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  8343930 cattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatgaa 8343831  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||          
T  8343830 aaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattttataagttatatttagtattattattttt- 8343732  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
       ||||||||||||| |||||||||||||| | ||||| |||||||||||||||| |||| || ||||||||| ||||||||||||||    
T  8343731 ---taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgatt 8343646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 139 - 325
Target Start/End: Complemental strand, 8330391 - 8330202
Alignment:
Q  139 agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaacttgttactttgattttattacaatata 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8330391 agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaaagataatttttgcattgaacttgttactttgattttattacaatata 8330292  T
Q  239 atgttttcaaacctttagtttgattattatta---ttatcttacagtgttaaagtttatgataatgtttgctttaaacttgttaattaaa 325  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8330291 atgttttcaaacctttagtttgattattattattattatcttacagtgttaaagtttatgataatgtttgcattaaacttgttaattaaa 8330202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 142 - 325
Target Start/End: Complemental strand, 8344147 - 8343957
Alignment:
Q  142 gaagattttcataatgtttgattatctctaactaa------tagtagtcatgttaa-tgataatttttgcattgaacttgttactttgattttattacaa 234  Q
    ||||||||||||||||||||||||||||||| |||      ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8344147 gaagattttcataatgtttgattatctctaattaactaatatagtagtcatgttaaatgataatttttgcattgaacttgttactttgactttattacaa 8344048  T
Q  235 tataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgctttaaacttgttaattaaa 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  8344047 tataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgcatttaacttgttaattaaa 8343957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 373 - 663
Target Start/End: Complemental strand, 24725609 - 24725316
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    ||||||||||||||||||| ||| ||||||||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||     
T  24725609 atcattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaatagg 24725510  T
Q  473 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat----ta 568  Q
     |||||||||  ||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    |     
T  24725509 caaaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattattttatt 24725411  T
Q  569 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
           |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||| ||||||||||    
T  24725410 ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgatt 24725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 4247356 - 4247641
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||  ||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||| ||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||||            
T  4247456 aattcatcgattttgattgcgattttatgatttcttataaactaagtcatttatgactatatatca-tttgtaacatatatttagtattatt-tttttta 4247553  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| || |  | ||||||||||||| || |||||||    
T  4247554 ggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgatt 4247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 376 - 635
Target Start/End: Complemental strand, 44944978 - 44944717
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcac----cttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    ||||||||| |||||||||||||||||||| |||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
      ||||||||| |||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-tt 44944781  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagt 635  Q
        |||||| || || ||||||||||||||||| |  |||||||||||| |||||||| ||||    
T  44944780 ttttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 44944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 375 - 660
Target Start/End: Original strand, 14055250 - 14055539
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| |||||||  || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 569  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14055350 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14055448  T
Q  570 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || |||||||||||||||||||||    
T  14055449 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttg 14055539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 375 - 660
Target Start/End: Original strand, 14365278 - 14365567
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| |||||||  || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 569  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14365378 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14365476  T
Q  570 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || |||||||||||||||||||||    
T  14365477 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttg 14365567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 377 - 663
Target Start/End: Original strand, 5058530 - 5058813
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||  |||||||  |||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 576  Q
    ||||   |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       |    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-ttttttg 5058727  T
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||| ||||| ||||||||||||||||| |  |||| ||||||| |||| ||| || |  | || |||||||||||||||||||||    
T  5058728 gtaaagtccatcgattttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgattttgatt 5058813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 27221417 - 27221699
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| |||||||  || ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||| |  |    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| || ||           
T  27221517 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagttttttt-----tt 27221610  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||| ||||  | |||||| |||||||||| |  ||||| || ||| |||||||| ||||   |||||||||||||||||||||||||    
T  27221611 tggtacaatcagtcgattttaattgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgatt 27221699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 5715290 - 5715570
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||| ||||||||||| ||||||||   ||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||| ||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | | || ||            
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatttttttt-----ttt 5715482  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||| ||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  | ||||||||||| ||||||||||||    
T  5715483 ggtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgatt 5715570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 404 - 663
Target Start/End: Original strand, 17811375 - 17811633
Alignment:
Q  404 taaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttac 503  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||   |||||||| |||||| || |||||| |||||||||||||    
T  17811375 taaaattcttgattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttac 17811474  T
Q  504 gatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgat 603  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||||| ||||||||| ||||| ||       |||||||||||| |||||||||||||||    
T  17811475 gatttcttataaactaagtcatttataattatatacca-tttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgat 17811573  T
Q  604 ttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    || |  ||||  |||||| |||||||| ||||  | |||||||||| |||||||||||||    
T  17811574 tttacaattttctatatcgattctacaaaagtccttgagtaaaatctttcgattttgatt 17811633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 376 - 565
Target Start/End: Complemental strand, 24990200 - 24990012
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||| | ||| ||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||  ||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 565  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||    
T  24990100 aatccatcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatacta-tttataacatatatttagtatta 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 375 - 560
Target Start/End: Complemental strand, 26281439 - 26281256
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||   |    
T  26281439 cattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagca 26281340  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttag 560  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  26281339 aaatccatcgatttt-gttgcgatttaacgatttcttataaactaagtcatttatgactatatacca-tttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 374 - 525
Target Start/End: Complemental strand, 9685375 - 9685224
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||  ||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||     
T  9685375 tcattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagac 9685276  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 525  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9685275 aaaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 9685224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 375 - 660
Target Start/End: Complemental strand, 7730472 - 7730206
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||| ||    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| |||                  |||||||||||||||||||||| ||           
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatca------------------tttataacatatatttagtattttttttttgt 7730292  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     ||||||||||||  |||||||||||||||| |  |||||||||||||||| |||| |||| || |||||||| | ||||||||||    
T  7730291 tggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttg 7730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 8330520 - 8330415
Alignment:
Q  19 gctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattttc 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8330520 gctatatgccatggaagggaggtaaaagaaagggagcacagggagagtggtggaagagatcatctataatgacctagaaaacaaaacaactcagattttc 8330421  T
Q  119 ataatg 124  Q
    ||||||    
T  8330420 ataatg 8330415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 8344283 - 8344183
Alignment:
Q  19 gctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattttc 118  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8344283 gctatatgccatggaagggaggtaaaagaaagggagcacatggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcagattttc 8344184  T
Q  119 a 119  Q
    |    
T  8344183 a 8344183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 446 - 663
Target Start/End: Complemental strand, 20570944 - 20570729
Alignment:
Q  446 aaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccatttt 545  Q
    ||||| |||||||||||  |||||||| ||||||||| |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  20570944 aaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatatacca-ttt 20570846  T
Q  546 ataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaa 645  Q
    ||||||||||||||||||||||        |||||| ||||| ||||||||||| ||||| || |||||||||||| |||||||| ||||  | ||||||    
T  20570845 ataacatatatttagtattatt-cttttttggtaaagtccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaa 20570747  T
Q  646 aatccttcgattttgatt 663  Q
    |||| ||| |||||||||    
T  20570746 aatctttcaattttgatt 20570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 376 - 520
Target Start/End: Complemental strand, 22687793 - 22687649
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| | |||||||||||||||  ||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaa 520  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||    
T  22687693 aatccatcgattttgattgcgattttacgatttcttacaaactaa 22687649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 652
Target Start/End: Original strand, 11324988 - 11325252
Alignment:
Q  385 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 484  Q
    ||||||| ||| |||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||| | |||||||  ||||| |||      
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcata- 11325086  T
Q  485 attttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt---tataacatatatttagtattattannnnnnnggtaaa 581  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||   ||||||||||  ||||| || ||        ||||||    
T  11325087 attttgattgcgaatttacgatttcttataaactaagtcatttatgactatataccaattatttataacatat--ttagttttttt--ttttttggtaaa 11325182  T
Q  582 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatcctt 652  Q
    |||||| |||||||||||  |||| |  ||||| |||||||||| ||||||||| || |||||||| ||||    
T  11325183 atccatcgattttgattgtaattttacaatttc-tatatcaattttacagaagtagttgagtaaaaccctt 11325252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 375 - 514
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||||||| |||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  475 aaatccattgattttaattgcgattttacgatttcttata 514  Q
    |||||||| ||||||  |||||||||||| ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 376 - 514
Target Start/End: Original strand, 11326386 - 11326524
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    ||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||  ||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  476 aatccattgattttaattgcgattttacgatttcttata 514  Q
    |||| || |||||| ||||||||||||| ||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctata 11326524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 383 - 500
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  383 tcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccat 482  Q
    ||||||||| ||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  483 tgattttaattgcgattt 500  Q
     |||||| ||||||||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 376 - 660
Target Start/End: Complemental strand, 21846554 - 21846294
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| | |||| ||  ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    |||| || |||||| |||||||                    |||||||| |||||||||||| || ||||||||||||||||| |||||||            
T  21846455 aatcaatcgattttgattgcga--------------------taagtcatttatgactatatatca-tttataacatatatttaatattatt--tatttg 21846379  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||||||  |||||||||| ||||| | ||||||||||||| |||||| | |||| || || ||||||||||||||||||    
T  21846378 ggtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttg 21846294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 375 - 567
Target Start/End: Complemental strand, 26617606 - 26617415
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc--atagtagaatcccaaa--ata 470  Q
    ||||||| | ||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||||  |||| |  |||||||||| | |||  |||    
T  26617606 cattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatata 26617507  T
Q  471 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 567  Q
    |  |||||| || |||||| |||||||||||||||  |||| || |||||||||| |||||||||    || |||||||||||||||||||||||||    
T  26617506 ggcaaaatctatcgattttgattgcgattttacgagatcttgtagactaagtcatttatgactat----ca-tttataacatatatttagtattatt 26617415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 27510051 - 27509914
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 496  Q
    ||||| |||||||  |||||||||||| ||||||||| | |||||| ||||||| ||||||||||   |||||||  ||||| |||  ||||| ||||||    
T  27510051 taaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgcg 27509952  T
Q  497 attttacgatttcttataaactaagtcatctatgacta 534  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27509951 attttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 6916786 - 6917063
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||||||||||||||| ||  |||||| | ||||| |||||||||||| ||| || |||||     ||||||||| ||||||||||| | ||||  |  |    
T  6916786 attgttgtcaaaatcccgatttaaatcttgaaatttaggattttgcgattttttttcacct-----gactcaaattcatagtagaattctaaaa--gtta 6916878  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| | |||| |||||||||||||||||||||||||| |||||||| ||||||| ||| |||  |||||||||||||||| || ||||           
T  6916879 aaatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattcca-gttataacatatatttaata-tatttttttgt 6916975  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||| ||| |||||||||||| |||| || |||||||||||| ||| ||   |||| || |||||||||||||| |||||||||    
T  6916976 tggtaaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgatt 6917063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 577 - 663
Target Start/End: Complemental strand, 8329909 - 8329823
Alignment:
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||| || |||||||||||||| |||||||||    
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgatt 8329823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 577 - 660
Target Start/End: Complemental strand, 8346396 - 8346313
Alignment:
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||| ||||||||||||||||| | | |||||||||||||||||||| | |||| || |||||||||||||||||||||    
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttg 8346313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 416 - 514
Target Start/End: Original strand, 1977692 - 1977790
Alignment:
Q  416 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 514  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||   ||||| | | |||||| |||||||||||| |||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 21157905 - 21157811
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||||  |||| | ||||||||||||||||||| | ||||| ||||    
T  21157905 tcattgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 513 - 663
Target Start/End: Complemental strand, 26565540 - 26565392
Alignment:
Q  513 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 612  Q
    |||||| |||||| ||||||||||||| | ||||||||||||||| |  ||||||        ||||||||||||  ||||||||||| |||| | ||||    
T  26565540 taaactgagtcatttatgactatatac-agtttataacatatattaac-attatttttgttttggtaaaatccatcaattttgattgcaattttacgatt 26565443  T
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    | ||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  26565442 ttttatattgattctacaaaagtagttgagtaaaatccttcgattttgatt 26565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 579 - 660
Target Start/End: Original strand, 39182357 - 39182438
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||| ||||||| ||||||||| |  |||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttg 39182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 24989704 - 24989618
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||||    
T  24989704 ggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcct-tagtaaaatccttcgattttgatt 24989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 462
Target Start/End: Complemental strand, 8630091 - 8630001
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 462  Q
    |||||||||||||||||||  ||| ||| ||| |||||  |||||||||| |||||  | | |||||||||||||||||||||||||||||    
T  8630091 aatcattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatc 8630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 471
Target Start/End: Original strand, 30294175 - 30294267
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    ||||||||||||||||  || ||||||||||||| |||||||||| || ||| ||||||||   |||||||||||||||| | |||| ||||||||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcacctt---cgactcaaatccatagcaaaatctcaaaatag 30294267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 470
Target Start/End: Complemental strand, 26565758 - 26565663
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    ||||||||||||||| ||| | |||||| |||||||||| ||||||  ||||| ||||| || ||||| |||||| ||||| |||||| |||||||    
T  26565758 cattgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaata 26565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 30294444 - 30294531
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| || |||||||| ||||| | |||||||| |||| |||||| | |||| ||  |||||||||||||||||||||||    
T  30294444 ggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatccttcgattttgatt 30294531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 4574475 - 4574544
Alignment:
Q  380 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 449  Q
    |||| |||||| |||| ||||||||||||| ||| |||||||||||||  ||||||||||||| ||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacgattcaaat 4574544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 8572336 - 8572422
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||||||||||||||| |||| || ||||| ||||||||||||||| | ||  | || ||| ||| |||||||||||||    
T  8572336 ggtaaaatccattgattttgattgcaattttataatttc-tatatcaattctacaaatgtccttgattaacatctttcgattttgatt 8572422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 659
Target Start/End: Complemental strand, 27509374 - 27509260
Alignment:
Q  543 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 642  Q
    |||||||||||||||||||||||||        ||||||||| || || ||| |||||||||| |  |||||||||||| |||||| | |||| || |||    
T  27509374 tttataacatatatttagtattatt--ttttttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgag 27509277  T
Q  643 taaaatccttcgatttt 659  Q
    ||||||||||| |||||    
T  27509276 taaaatccttcaatttt 27509260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 8329907 - 8329867
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  8329907 aaaatcctttgattttgattgcgattttacgatttcttata 8329867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 663
Target Start/End: Original strand, 8304324 - 8304371
Alignment:
Q  616 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  8304324 tatatcaattctacaaaagtccttgagtaaaatccttcgattttgatt 8304371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 8346394 - 8346354
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||| |||||||| |||||||| |||||||||||||||    
T  8346394 aaaatcctttgattttgattgcgatattacgatttcttata 8346354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 9685275 - 9685235
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  9685275 aaaatccatcgattttaattgcgattttatgatttcttata 9685235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 9e-81; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 375 - 660
Target Start/End: Complemental strand, 5362093 - 5361812
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||           
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttt-taacatatatttagtattttt---cttt 5361898  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     ||| |||||||| || |||||||||||||| | |||||| |||||| |||||||| |||| || |||||||| ||||||||||||    
T  5361897 tggtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttg 5361812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 398 - 659
Target Start/End: Complemental strand, 9911518 - 9911259
Alignment:
Q  398 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcga 497  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |  |||||||||||||||||| ||||| |  ||||||||| |||||| |||||||    
T  9911518 aaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggcaaaatccatcgattttgattgcga 9911419  T
Q  498 ttttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgat 597  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||       |||||| ||||| |||||||||    
T  9911418 ttttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaagtattatta-ttttttggtaaagtccatcgattttgat 9911321  T
Q  598 tgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 659  Q
    |||||||| |  |||||||||||| |||||||| ||||  ||||||||||||||||| ||||    
T  9911320 tgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcgttttt 9911259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 378 - 663
Target Start/End: Original strand, 5375666 - 5375950
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 477  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||||||||||||||||||||||||| |||| |||| ||||||   |||||||| ||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  478 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 577  Q
    | ||| || ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||| |        ||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatca-tttataacatatatttagtattaattttttttggg 5375864  T
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||  |||||||||||||  | ||||||||||||||||||||||||    
T  5375865 taaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgattttgatt 5375950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 375 - 565
Target Start/End: Original strand, 13023566 - 13023758
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaa-ttcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatccc--aaaatag 471  Q
    |||||||||||||||||  || |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 565  Q
    | |||||| || |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatatacca-tttataacatatatttagtatta 13023758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 374 - 663
Target Start/End: Original strand, 10142897 - 10143185
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||| ||||||| ||| ||||| |||||||| |  ||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||     
T  10142897 tcattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagac 10142996  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 573  Q
    ||||||||| |||||| |||| |||||||||||||||||||||  ||||||| |||||||||||||||  |||||| |||||||||||||||||          
T  10142997 aaaatccatcgattttgattgtgattttacgatttcttataaatcaagtcatttatgactatatacca-attataatatatatttagtattatttttttt 10143095  T
Q  574 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
      | ||||||||||  |||||||||||||||| |  || ||||||||| |||||||| || | || || |||||||||||||||||||||    
T  10143096 ttgataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgattttgatt 10143185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 9770112 - 9770397
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||| ||||||  ||| ||||| |||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    |||| ||  ||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||| || |||||||||||||||||||| |            
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaactaagttacttatgactatatacca-ttcataacatatatttagtattaat-ttttttg 9770309  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| |||   | ||||||||||||||||||||||||    
T  9770310 ggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgattttgatt 9770397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 36120823 - 36121108
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||| | ||  |||||  ||||||| |||||||||||| |||||||||||||||||||| ||||||||| || ||| | ||||||   |    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||| ||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||          
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatatacca-tttataaaatatatttagtattatta--tttt 36121019  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| || ||||| ||||  | |||||||||| |||||||||||||    
T  36121020 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgatt 36121108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 375 - 564
Target Start/End: Original strand, 8889227 - 8889415
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||| || |||||||||| |||||||||||||| |||| ||||||||||||||||  |    
T  8889227 cattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggca 8889326  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 564  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  8889327 aaattcatcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatatacca-tttataatatatatttagtatt 8889415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 377 - 660
Target Start/End: Original strand, 17466080 - 17466361
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||||||||| |  || |||||| ||||||| |||||||||||| |||||||| ||| || |||||||||||||| |||||||| ||||||   |||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 576  Q
    |||||| |||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||             
T  17466180 atccatcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatatacca-tttataacatatatttaatattatt-tttttgtt 17466277  T
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||||| |||||||||||| |||| |  |||||||||||| |||| ||| |||| || ||||| |||| ||| ||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatctttcaattttg 17466361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 374 - 525
Target Start/End: Complemental strand, 13551753 - 13551602
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||  ||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||     
T  13551753 tcattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagac 13551654  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 525  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13551653 aaaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 13551602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 374 - 663
Target Start/End: Complemental strand, 23065094 - 23064805
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||| |||| || ||| ||||| ||||||| ||| ||||||  ||||||||||| ||||||||||||||||||| ||||||| | |||||||      
T  23065094 tcattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggt 23064995  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaac--taagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
     |||||||| |||||||||||| |||||||||||||||||||||  |||||||| ||||||  |||| || ||||||||||||||||||||||||||       
T  23064994 caaatccatcgattttaattgcaattttacgatttcttataaactataagtcatttatgaccctatatca-tttataacatatatttagtattatta-tt 23064897  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
        |||||||||  | |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | || ||||||||||| |||||||||    
T  23064896 ttttggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgatt 23064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 375 - 568
Target Start/End: Original strand, 37240261 - 37240448
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| |||||||  || |||||||||||||| ||    || ||||||| |||||||||||||||||||||||||||||||| ||||||||||  |    
T  37240261 cattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaa-cccaaaataggca 37240355  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 568  Q
     ||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  37240356 taattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactctatacca-tttatatcatatatttagtattatta 37240448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 376 - 509
Target Start/End: Complemental strand, 8011345 - 8011212
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  476 aatccattgattttaattgcgattttacgatttc 509  Q
    ||| ||| |||||| ||||||||||| |||||||    
T  8011245 aattcatcgattttgattgcgattttgcgatttc 8011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 7044728 - 7044821
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    ||||||||||||||| ||| ||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaata 7044821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 469
Target Start/End: Original strand, 24719513 - 24719610
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaat 469  Q
    |||||||||||||||||||  ||| ||| | |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  24719513 aatcattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 480
Target Start/End: Complemental strand, 18459838 - 18459733
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| ||||||| |||  |||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||| ||||||| |||||||  |    
T  18459838 cattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggca 18459739  T
Q  475 aaatcc 480  Q
    ||||||    
T  18459738 aaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 663
Target Start/End: Original strand, 24719725 - 24719860
Alignment:
Q  527 tatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattc 626  Q
    ||||||||||||| |||| ||||||||||||||  ||||||        |||||||  ||| ||||||||||||||||| | ||||||||||||| ||||    
T  24719725 tatgactatatacaattt-ataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgattc 24719823  T
Q  627 tacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||| ||||  |||||||||||||||||||| |||||    
T  24719824 tacaaaagtaatcgagtaaaatccttcgattgtgatt 24719860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 4156763 - 4156857
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    |||||||||||||||| ||| |||||| ||||||| ||||||||  |||||| |||||||| |||||||||||||  ||||||||||| ||||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaata 4156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 513 - 663
Target Start/End: Complemental strand, 8011129 - 8010980
Alignment:
Q  513 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 612  Q
    |||||||| |||| ||| | ||||||| |||| ||||||||||||||| ||||||        |||||||| ||| ||||||||||||||||| |  |||    
T  8011129 taaactaattcatttataattatatacaattt-ataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaatt 8011031  T
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| |||||| | || | || ||||||||||||||||||||||||    
T  8011030 tcttatatcgattctataaaaatagttgagtaaaatccttcgattttgatt 8010980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 480
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  380 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 479  Q
    |||| ||||||| ||| ||||||||||||| ||| |||||| |||||| |||| ||| | ||||||||| ||||||||||||||||||||||  ||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  480 c 480  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 580 - 663
Target Start/End: Complemental strand, 6346882 - 6346799
Alignment:
Q  580 aaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||| ||||||||||||||||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgatt 6346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 374 - 481
Target Start/End: Complemental strand, 6347195 - 6347088
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    ||||| |||||||||| |  || ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||  || || ||||||||      
T  6347195 tcattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatagccgagtctcaaaataggt 6347096  T
Q  474 aaaatcca 481  Q
    ||||||||    
T  6347095 aaaatcca 6347088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 374 - 456
Target Start/End: Original strand, 7452418 - 7452499
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagt 456  Q
    |||||||||| ||||||| ||| ||||| ||||||| ||| ||||||| ||||| ||||||||||||||||| ||||||||||    
T  7452418 tcattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagt 7452499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 7044961 - 7045048
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| |||||||||||  |||| | ||||||||||||| ||| | || |||| || |||||||||| |||||||||||||    
T  7044961 ggtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgatt 7045048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 520 - 663
Target Start/End: Complemental strand, 9149709 - 9149566
Alignment:
Q  520 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttg-atgatttcttat 618  Q
    |||||| ||| ||||||||| |||| ||||||||||||||| ||||||        ||||||||| ||  |||||||||||| |||  | ||||||||||    
T  9149709 agtcatttataactatatacaattt-ataacatatatttagcattatttttcttttggtaaaatctatcaattttgattgcgttttttacgatttcttat 9149611  T
Q  619 atcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||| |||||||  |||| || |||||||||||||| |||||||||    
T  9149610 atcgattctacgaaagtagttgagtaaaatccttcaattttgatt 9149566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 663
Target Start/End: Original strand, 37240450 - 37240524
Alignment:
Q  590 attttgattgcgatttgatgatttctt-atatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||| ||||| | |||||||| ||||| |||||||| |||| || ||||||||||||||||||||||||    
T  37240450 attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgatt 37240524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 9149864 - 9149791
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 449  Q
    ||||| |||||||||| ||| |||||||||||||| |||||||||||||||| |  |||||||| || ||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttatctaccttcaaagaatcaaat 9149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 663
Target Start/End: Original strand, 55476223 - 55476273
Alignment:
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  55476223 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 55476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 511
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttctt 511  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 480
Target Start/End: Original strand, 7803070 - 7803110
Alignment:
Q  440 cgactcaaatccatagtagaatcccaaaatagaaaaaatcc 480  Q
    ||||||||| |||||| |||||||||||||||| |||||||    
T  7803070 cgactcaaacccatagcagaatcccaaaatagacaaaatcc 7803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 13551653 - 13551613
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  13551653 aaaatccatcgattttaattgcgattttatgatttcttata 13551613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 18327339 - 18327415
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 448  Q
    |||||||||||||||||||  ||  ||| ||  |||||| ||||||||||||||||  | | |||||||||||||||    
T  18327339 aatcattgttgtcaaaatcacgaattaagtctcaaaatttaggattttgcgactttacttagcttcaacgactcaaa 18327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 18438058 - 18437982
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 448  Q
    |||||||||||||||||||  ||  ||| ||  |||||| ||||||||||||||||  | | |||||||||||||||    
T  18438058 aatcattgttgtcaaaatcacgaattaagtctcaaaatttaggattttgcgactttacttagcttcaacgactcaaa 18437982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 441
Target Start/End: Complemental strand, 46664465 - 46664421
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacg 441  Q
    |||||| |||||||||| ||||||||||||| |||| ||||||||    
T  46664465 taaatcttaaaattcagaattttgcgactttgttcatcttcaacg 46664421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 6e-79; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 372 - 663
Target Start/End: Original strand, 11879596 - 11879885
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  11879596 aatcattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11879695  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
     |||||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||       
T  11879696 gaaaaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-tt 11879793  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
        |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||    
T  11879794 ttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgatt 11879885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 372 - 663
Target Start/End: Original strand, 11897012 - 11897301
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  11897012 aatcattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11897111  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
     |||||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||       
T  11897112 gaaaaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-tt 11897209  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
        |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||    
T  11897210 ttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgatt 11897301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 373 - 663
Target Start/End: Original strand, 15294667 - 15294954
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||     
T  15294667 atcaatgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatagg 15294766  T
Q  473 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 572  Q
     ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||         
T  15294767 caaaatccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--ttt 15294863  T
Q  573 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
       |||||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | ||||||||||||||||||||||||    
T  15294864 ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgatt 15294954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 373 - 663
Target Start/End: Original strand, 15475036 - 15475323
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||     
T  15475036 atcaatgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatagg 15475135  T
Q  473 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 572  Q
     ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||         
T  15475136 caaaatccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--ttt 15475232  T
Q  573 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
       |||||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | ||||||||||||||||||||||||    
T  15475233 ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgatt 15475323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 5922048 - 5922333
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| |    
T  5922048 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagaca 5922147  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| |||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||| || ||||||||||||||||||||  |          
T  5922148 aaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatatacca-ttcataacatatatttagtatta-aatttttt 5922245  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||||||| || || ||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  5922246 gggtaaaatccatcga-ttagattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 5922333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 375 - 564
Target Start/End: Original strand, 31424162 - 31424350
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||  |    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 564  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatatacca-attataacatatatttagtatt 31424350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 372 - 660
Target Start/End: Complemental strand, 29384449 - 29384159
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||| ||||||||||||||| |   |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29384449 aatcgttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaatag 29384350  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta----tt 567  Q
      ||||| ||| || ||| ||||||||||||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||||||||    ||    
T  29384349 gcaaaattcatcga-tttgattgcgattttacgatttcttataaaacaattcatttatgactatatacca-tttataacatatatttagtattagtattt 29384252  T
Q  568 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
            |||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |||| || |||||||||||||||||||||    
T  29384251 ttttttttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttg 29384159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 17646993 - 17647282
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattatta-nnnn 572  Q
    ||| ||| |||||| ||||  |||| ||||||||||||||||  |||||  | | | | ||||||||| ||| ||| ||||||||| | ||||||         
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaacctagtcattttttttattatatacca-tttgtaaaatatatttaatgttattattttt 17647191  T
Q  573 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
       | |||||||||| ||||||||||||||||| |  |||||||||||| |||||||| || | || ||||||||||||||||||||||||    
T  17647192 tttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgatt 17647282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 45403029 - 45403314
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||  ||| ||||| ||||||| || ||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||   ||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||||||| |||||| ||||||||||||||||| ||||| ||| ||||||| |||||  |||||||| ||||||||||||||||| ||||||||           
T  45403129 aatccatcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatatacca-tttataacatatatttaatattattattttttt 45403227  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| || ||||||||||||| ||| |  ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||||    
T  45403228 ggtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgatt 45403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 378 - 663
Target Start/End: Complemental strand, 19704583 - 19704301
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattca-ggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||||||||||  || |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 576  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||||||||||| || ||        |    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaaccaagttatttatgactatatacca-tttgtaacatatatttagttttttt---ttttag 19704388  T
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||| ||||||||||| ||||| | ||||||  ||||| ||||||||  |||  | ||||||| ||||| ||||||||||    
T  19704387 gtaaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgatt 19704301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 425 - 658
Target Start/End: Original strand, 23142224 - 23142454
Alignment:
Q  425 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 524  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| |||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  525 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 624  Q
    | ||||||||||||||| ||||||||||||||||||||||||||       |||||| ||||| ||||||||||||||||| |  |||||||||||| ||    
T  23142324 tttatgactatatacca-tttataacatatatttagtattatta--tttttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgat 23142420  T
Q  625 tctacagaagtggtcgagtaaaatccttcgattt 658  Q
    |||||| ||||  | || ||||||| ||||||||    
T  23142421 tctacaaaagtttttgactaaaatcattcgattt 23142454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 371 - 562
Target Start/End: Complemental strand, 22910336 - 22910146
Alignment:
Q  371 aaatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    ||||||||| ||| || |||| ||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||  ||||||    
T  22910336 aaatcattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaata 22910237  T
Q  471 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagta 562  Q
    |  |||||||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||||| ||||||    
T  22910236 ggcaaaatccattgattttgattgcgattttaagatttcttataaattaagtaatttatgactatatacca-tttataacatatacttagta 22910146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 415 - 660
Target Start/End: Original strand, 6810861 - 6811101
Alignment:
Q  415 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||  ||||| ||| |||||| ||| ||||||||||||||| ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaat-catcgattttgattacgattttacgatttcatata 6810959  T
Q  515 aactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttc 614  Q
    ||||||||||| ||| |||||||| || |||||||||||||||||||||||||        |||||||||||| |||||||||||||||||    |||||    
T  6810960 aactaagtcatttataactatatatca-tttataacatatatttagtattatt--ttttttggtaaaatccatcgattttgattgcgattt-tcaatttc 6811055  T
Q  615 ttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||| |||||||| |||| || || |||||| |||||||||||    
T  6811056 ttatatctattctacaaaagtagttgattaaaattcttcgattttg 6811101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 380 - 564
Target Start/End: Complemental strand, 3094378 - 3094185
Alignment:
Q  380 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 479  Q
    ||||||||||   ||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  480 cattgattttaattgcgattttacgatttct----------tataaactaagtcatctatgactatataccattttataacatatatttagtatt 564  Q
    ||| |||||| |||||||||||||||||| |          ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 3094185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 375 - 564
Target Start/End: Complemental strand, 27836594 - 27836406
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||| |  || || |||||||||||||||||||||||  ||| |||||||||||| ||| |||||||||||||||| | ||||||   |    
T  27836594 cattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagca 27836495  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 564  Q
    |||| |||  ||||| ||| | ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  27836494 aaattcatcaattttgattacaattttacaatttcttataaactaagtcatttatgactatatacca-tttataacatgtatttagtatt 27836406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 663
Target Start/End: Complemental strand, 7489417 - 7489127
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc----caaa 467  Q
    ||||||| ||||||||||||  |  |||||| |||||| ||| |||||||   |||||||||||||||||||| |||||| ||||||||| |     |||    
T  7489417 aatcattattgtcaaaatccccaattaaatcgtaaaatacagaattttgc---tttcttcaccttcaacgactaaaatccgtagtagaattctaaataaa 7489321  T
Q  468 atagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 567  Q
    ||||| |||||  || |||||| ||||| |||||| ||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |    
T  7489320 atagacaaaatttatcgattttgattgcaattttatgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattaat 7489222  T
Q  568 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |        ||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| ||||  | |||||||||||| |||||||||||    
T  7489221 atttttga-gtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatcctccgattttgatt 7489127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 397 - 659
Target Start/End: Original strand, 32424356 - 32424615
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 496  Q
    ||||| |||||||| ||||||||  |||||| ||||   | ||||| |||||| ||||||||||||| |||||||| |||||  || |||||| ||||||    
T  32424356 taaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattgcg 32424452  T
Q  497 attttacgatttcttataaactaagtcatctatgactatataccattttataac--atatatttagtattattannnnnnnggtaaaatccattgatttt 594  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||  ||||||||||||||| |        | ||||||| || ||||||    
T  32424453 attttacgatttattatatactaagtcatttatgactatatacca-tttataacatatatatttagtattaat-ttttctggataaaatctatcgatttt 32424550  T
Q  595 gattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 659  Q
     |||||||||| |  ||||| ||| || |||||||| || |  | ||||||||||||||||||||    
T  32424551 tattgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgatttt 32424615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 375 - 479
Target Start/End: Complemental strand, 24056698 - 24056594
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||| |||||||| |||| ||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||   |||||||||||||| |    
T  24056698 cattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagaca 24056599  T
Q  475 aaatc 479  Q
    |||||    
T  24056598 aaatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 566
Target Start/End: Complemental strand, 6292467 - 6292282
Alignment:
Q  380 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 479  Q
    |||| ||||| | ||| |||||| ||||||| | ||||||| |||||| |||| ||| ||||||||||| |||||||| ||| | ||||||  ||||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  480 cattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat 566  Q
    ||  |||||| |||||| | |||| |||| |||||| ||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||    
T  6292367 caacgattttgattgcggtcttacaatttattataatctaagtcatttatcactatatacca-tttataaaatatatttaatattat 6292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc 451  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 465 - 559
Target Start/End: Complemental strand, 9212295 - 9212202
Alignment:
Q  465 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta 559  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||| ||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatatacca-tttataacctatattta 9212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 15761569 - 15761473
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    ||||||||||||||||  ||| ||||||||||| | |||||||||| || ||| || |||||||||||||||||| ||||| | |||||||||||||    
T  15761569 cattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaatag 15761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 543 - 658
Target Start/End: Complemental strand, 15761322 - 15761207
Alignment:
Q  543 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 642  Q
    |||||||||||||||||| ||||||        |||||||||||| ||||||||||||||||| |  | |||||||||| |||||||| ||||  | |||    
T  15761322 tttataacatatatttagcattatttttgttttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagtaattgag 15761223  T
Q  643 taaaatccttcgattt 658  Q
    ||||||||||||||||    
T  15761222 taaaatccttcgattt 15761207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 576 - 649
Target Start/End: Original strand, 8582241 - 8582314
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatc 649  Q
    |||||||| ||| |||||||||||  |||| | |||||||||||||||||||||| |||| || ||||||||||    
T  8582241 ggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 9036801 - 9036757
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgc 421  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttgc 9036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 23136348 - 23136396
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcga 423  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  23136348 cattattgtcaaaatcccgacttaaatcctaaaattcaggattttgcga 23136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 17566313 - 17566383
Alignment:
Q  593 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| ||||||||||||||    
T  17566313 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgatt 17566383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 514
Target Start/End: Original strand, 15231745 - 15231862
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 496  Q
    ||||||||||| || | ||||||||||  ||||||||||||||||||| |||| |||| || ||||  |||||||  ||||||||     ||| ||||||    
T  15231745 taaatcctaaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcg 15231844  T
Q  497 attttacgatttcttata 514  Q
    ||||||| |||| |||||    
T  15231845 attttacaattttttata 15231862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 578 - 663
Target Start/End: Complemental strand, 24056499 - 24056414
Alignment:
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||| || |||| |||||||||||| |  |||| ||||||  |||||||| || | || ||||||||||||||||||||||||    
T  24056499 taaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttcgattttgatt 24056414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 22910233 - 22910193
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  22910233 aaaatccattgattttgattgcgattttaagatttcttata 22910193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 31424261 - 31424301
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  31424261 aaaatccattgattttgattgcgattttacgatttcttata 31424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 658
Target Start/End: Complemental strand, 22910118 - 22910052
Alignment:
Q  592 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 658  Q
    |||||||||||||| | ||||||||||||| |||||||| || | || || ||||||||||| ||||    
T  22910118 tttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaattt 22910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 577 - 663
Target Start/End: Complemental strand, 24414217 - 24414131
Alignment:
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||| |||||| |||||||  ||||| |  ||||| |||||| |||||||| || |  | ||||||||||||||||||||||||    
T  24414217 gtaaaattcattgaatttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgatt 24414131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 9212286 - 9212246
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  9212286 aaaatccatcgattttgattgcgattttaagatttcttata 9212246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 6e-79; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 43234868 - 43235153
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||||||| |||||| |||| |||||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||| ||| ||||||||           
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaacca-tttataacatatacttactattatta-tctttt 43235065  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| || ||||||||||||||||| |  |||| ||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  43235066 ggtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 43235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 377 - 663
Target Start/End: Original strand, 18843716 - 18844000
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||| ||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 576  Q
    || ||| |||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |        |    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaactaagtcatttatgattatatacca-tttataacatatatttagtattaat-ttttttgg 18843913  T
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||| ||||||||||||||||| |  ||||| |||||  |||||||| ||||  | ||||||||| || |||||||||||    
T  18843914 gtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaatactccgattttgatt 18844000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 19578941 - 19579228
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||| |  || |||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   |    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||| ||||||||           
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttacca-ttcataacatatatttggtattattttttttt 19579139  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||||||| ||||||||||||||||| |  ||||  |||| | |||||||| ||||  | |||| |||||||||||||||||||    
T  19579140 tggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgattttgatt 19579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 375 - 660
Target Start/End: Complemental strand, 21059285 - 21059003
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||  |||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||  |    
T  21059285 cattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggca 21059187  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||| ||           
T  21059186 aaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaacca-tttataacatatatttagtattttt--ttttg 21059090  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagt-aaaatccttcgattttg 660  Q
      ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||| ||  ||| |||||| ||||||||||    
T  21059089 ttgtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttg 21059003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 377 - 663
Target Start/End: Complemental strand, 23172560 - 23172272
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  477 ----atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 572  Q
        ||| || |||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||| |         
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatatacca-tttgtaacatatatttaatattaat-tttt 23172363  T
Q  573 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
       |||||||| ||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  23172362 ttgggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgatt 23172272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 372 - 635
Target Start/End: Complemental strand, 18051663 - 18051405
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||    
T  18051663 aatcattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaatag 18051564  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
      ||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||   | ||||||||||||||||||||||||||       
T  18051563 gcaaaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atat---aatttataacatatatttagtattatta-tt 18051469  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagt 635  Q
        ||| |||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||    
T  18051468 ttttggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagt 18051405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 384 - 663
Target Start/End: Complemental strand, 27340307 - 27340031
Alignment:
Q  384 caaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccatt 483  Q
    |||||||| ||| |||||| ||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||  |||||||  ||||| |||     
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  484 gattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta--nnnnnnnggtaaa 581  Q
    |||||| |||| |||||||  |||||||||||||||||||||     ||||||||||||||  ||||||||||||||||||||||          |||||    
T  27340207 gattttgattgagattttaatatttcttataaactaagtcatt----actatataccatttg-taacatatatttagtattattattatttttttgtaaa 27340113  T
Q  582 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||| || ||||||||||||||||| |  ||||||||||||||||||||| ||||    ||||||||||||||||||||||||    
T  27340112 atctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgatt 27340031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 376 - 660
Target Start/End: Complemental strand, 38158383 - 38158111
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||| | ||| |||||||||||||  ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||| ||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||||||||||||||  |||  |||||||||||||||||||||||| |||| ||||||||          |||||||||||||||||||||||            
T  38158283 aatccattgattttggttgttattttacgatttcttataaactaaatcatttatgacta----------tataacatatatttagtattatt--tttttt 38158196  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||||||  |||||||||| ||||| |  |||||||| ||  |||||||| || | || |||||||||||||||||||||    
T  38158195 ggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgattttg 38158111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 375 - 542
Target Start/End: Complemental strand, 22645849 - 22645681
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||   |    
T  22645849 cattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagta 22645750  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaa-gtcatctatgactatataccat 542  Q
    || |||||  ||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  22645749 aattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatataccat 22645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 397 - 660
Target Start/End: Complemental strand, 41688772 - 41688513
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 496  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| ||||  |||||| ||| | ||||||   ||||| ||| |||||| ||||||    
T  41688772 taaatcctaaaattc-ggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgattgcg 41688674  T
Q  497 attttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttga 596  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||        |||||||| ||| ||||||||    
T  41688673 attttacgatttcttataaactaaatcatttataactatatacca-ttcataacatatatttagtattatt--ttttttggtaaaattcatcgattttga 41688577  T
Q  597 ttgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||| |  ||||  |||||| |||||||| ||||  |  ||||||||||||||||||||    
T  41688576 ttgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatccttcgattttg 41688513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 425 - 568
Target Start/End: Original strand, 19979648 - 19979790
Alignment:
Q  425 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 524  Q
    |||||||| |||||||||||||||| ||| |||||||||||||| |   ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  525 tctatgactatataccattttataacatatatttagtattatta 568  Q
    | ||||||||||||||| ||||||||||||||||| ||||||||    
T  19979748 tttatgactatatacca-tttataacatatatttattattatta 19979790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 425 - 663
Target Start/End: Original strand, 20320992 - 20321228
Alignment:
Q  425 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 524  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||| ||||| |||  | ||| ||||||||||||||| ||||||||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaactaagtca 20321090  T
Q  525 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 624  Q
    | |||||| ||||| || ||||||||||||||||| ||||| |        |||||||||||| ||||||||||||||||| |  ||||| |||||  ||    
T  20321091 tttatgaccatatatca-tttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatatagat 20321189  T
Q  625 tctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||| ||||  |  ||||||||||||| |||||||||    
T  20321190 tctacaaaagtccttcagtaaaatccttcaattttgatt 20321228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 376 - 501
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||  ||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  476 aatccattgattttaattgcgatttt 501  Q
    | ||||| |||||| |||||||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 24106645 - 24106714
Alignment:
Q  380 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 449  Q
    |||||||||||||||  |||||| |||||||||||||||||| ||||||||||||  |||||||||||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 378 - 450
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatc 450  Q
    ||||||||||||||  || ||||| |||||||| | ||||||| |||||||||||||||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacga 442  Q
    ||||||||||||||  ||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 520 - 663
Target Start/End: Original strand, 26021464 - 26021604
Alignment:
Q  520 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    |||||| ||||||||||||| |||| ||||||||||||||| |||||||       |||||||| ||| |  ||| |||| ||||| | |||||||||||    
T  26021464 agtcatttatgactatatacaattt-ataacatatatttagcattattattgttttggtaaaatgcatcg--tttaattgtgattttacgatttcttata 26021560  T
Q  620 tcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    || ||  |||| |||| || |||||||||||| |||||||||||    
T  26021561 tcgatgttacacaagtagttgagtaaaatcctacgattttgatt 26021604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 663
Target Start/End: Original strand, 41427657 - 41427704
Alignment:
Q  616 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||| |||||||| ||||  ||||||||||||||||||||||||||    
T  41427657 tatatcgattctacaaaagtcctcgagtaaaatccttcgattttgatt 41427704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 517
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  475 aaatccattgattttaattgcgattttacgatttcttataaac 517  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 613 - 663
Target Start/End: Original strand, 19377838 - 19377888
Alignment:
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  19377838 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 19377888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 514
Target Start/End: Complemental strand, 43005785 - 43005747
Alignment:
Q  476 aatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  43005785 aatccatcgattttaattgcgattttacgatttcctata 43005747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 19979697 - 19979737
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  19979697 aaaatccatggattttgattgcgattttacgatttcttata 19979737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 6e-79; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 376 - 663
Target Start/End: Original strand, 23528656 - 23528941
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    ||||||||||||||||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    |||| || |||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||| ||||||||           
T  23528756 aatctatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatatacca-tttataacgtatatttattattatta-ttattg 23528853  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  23528854 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 23528941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 372 - 663
Target Start/End: Complemental strand, 16125591 - 16125299
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt---caccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||  |||||||||||| ||||  ||||    
T  16125591 aatcattattttcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaa 16125492  T
Q  469 tagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 568  Q
    |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  16125491 taggcaaaatccattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatatacca-tttataacatatatttagtattatta 16125393  T
Q  569 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
           |||||  ||||| ||||||||||||||||| |  |||||||||||| |||||||| | ||  | ||||||||||||||||||||||||    
T  16125392 -tttttgggtaacgtccatcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgattttgatt 16125299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 13100190 - 13100475
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||| ||||||||||||  || ||||| |||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  |    
T  13100190 cattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggca 13100289  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    ||| |||| |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||  |||          
T  13100290 aaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatatacca-tttgtaacatatatttagtat--ttatttttt 13100386  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||||||| ||||||||||||||||| | ||||||||||||| |||||||| | ||  | ||||||||||||| ||||||||||    
T  13100387 gggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgatt 13100475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 374 - 663
Target Start/End: Complemental strand, 9955166 - 9954877
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    ||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||       
T  9955166 tcattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagc 9955067  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 573  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||         
T  9955066 aaaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatatacca-tttataacatatattcagtattattattttt 9954968  T
Q  574 nng-gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
      | ||||||||||| ||| ||||||||||||| |  ||||| |||||  |||||  | ||||  |   ||||||||||||||||||||||    
T  9954967 ttgtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgatt 9954877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 375 - 663
Target Start/End: Complemental strand, 25146898 - 25146612
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    || | |||  ||||||||||||| |||||||||||||||||||||||| || |||||||||||| || |||||||| |||||||||||| | |           
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatata-caatttataacgtatatttagtatcaat-tttttt 25146702  T
Q  575 nggtaaaatccattgattttgattgcga-tttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||||||| |||||||||||||| ||| |  ||||  |||||| |||||||  |||   | ||||||||||||||||||||||||    
T  25146701 gggtaaaatccatcgattttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgatt 25146612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 373 - 605
Target Start/End: Complemental strand, 9327347 - 9327116
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  9327347 atcattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaataga 9327248  T
Q  473 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattattann 570  Q
     ||||||||| |||||| ||||||||||||||||||||||||||||||||||  | | ||||||||||||| ||||||| |||||||||||||||||       
T  9327247 caaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatatacca-tttataatatatatttagtattatt--t 9327151  T
Q  571 nnnnnggtaaaatccattgattttgattgcgattt 605  Q
         |||||||| ||| |||||||||||||||||    
T  9327150 ttttgggtaaaattcatcgattttgattgcgattt 9327116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 375 - 663
Target Start/End: Complemental strand, 9352193 - 9351907
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||| |    
T  9352193 cattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagaca 9352094  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||| | |||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |           
T  9352093 aaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatatacca-tttataacatatatttagtattaat-tttttt 9351996  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||| ||| ||||||||||| ||||| |  ||||| |||||  |||||||| ||||  | |  ||||||||| |||||||||||    
T  9351995 gggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgattttgatt 9351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 375 - 661
Target Start/End: Complemental strand, 18304941 - 18304657
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttc-aacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||  || ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||     
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 573  Q
    |||||||||  ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||| |          
T  18304841 aaaatccatcaattttgattgcga-tttacgatttcttataagctaagtcatttatgactatatacca-ttcataacgtatatttagtattaat-ttttt 18304745  T
Q  574 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttga 661  Q
      | |||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||    
T  18304744 ttgataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttga 18304657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 372 - 663
Target Start/End: Complemental strand, 21846401 - 21846118
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21846401 aatcattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatag 21846302  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
    ||||||||||| |||||| |||||||||||   |||| | ||||||   ||||| ||| ||||||||  | ||||||||||||||||||||||| |        
T  21846301 aaaaaatccatcgattttgattgcgatttt---atttttcataaac---gtcatttataactatata-taatttataacatatatttagtattaat-ttt 21846210  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
        |||||||| |||  |||||||||||||||| |  |||||||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  21846209 tttgggtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 21846118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 376 - 630
Target Start/End: Complemental strand, 13276395 - 13276143
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||  ||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    |||| || |||||| |||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||||           
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattatta-tttttt 13276198  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctaca 630  Q
    |||| | ||||| |||||||||||| |||| |  |||||||||||| ||||||||    
T  13276197 ggtatagtccatcgattttgattgcaattttacaatttcttatatcgattctaca 13276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 378 - 663
Target Start/End: Complemental strand, 19010073 - 19009792
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 477  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||| | ||||||   ||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  478 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 577  Q
    ||||| |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||  ||||||| |||| ||        ||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaattaagtcatttataactatatacca-tttataac--atatttaatatt-ttttttttgggg 19009878  T
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| |||||||||||||||||| |  ||||| |||||| ||| |||| ||||  | ||||||||||||| ||||||||||    
T  19009877 taaaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgatt 19009792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 377 - 566
Target Start/End: Complemental strand, 42180193 - 42180005
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||  |||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat 566  Q
    || ||| |||||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagtattat 42180005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 378 - 660
Target Start/End: Original strand, 12513283 - 12513553
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 477  Q
    |||||||||||||| ||| ||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||   ||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  478 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 577  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||  ||||||| ||||||         ||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatatacca-tatataac--atatttaatattat--attttttgg 12513477  T
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||| || ||||||||||||||||| |  ||||||||       ||||||||||| || ||||||||||||| |||||||    
T  12513478 taaaatctatcgattttgattgcgattttacaatttctta-------tctacagaagtagttgagtaaaatcctttgattttg 12513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 376 - 568
Target Start/End: Complemental strand, 9128969 - 9128778
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||| ||||||  ||| |||||||||||| | ||||| |||||||||||||||| || ||||||||||||  |||||||||||  |||||||| ||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 568  Q
    ||| ||| |||||| |||||||||| ||||||||||||||||||||| || | ||||||||||||| |||||||||||| |||||||||||||    
T  9128869 aattcatcgattttgattgcgatttgacgatttcttataaactaagttatttttgactatatacca-tttataacatatctttagtattatta 9128778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 475 - 660
Target Start/End: Original strand, 47785958 - 47786140
Alignment:
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||           
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt--ttttg 47786054  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     |||||||||||| |||||| ||| ||||||  ||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  47786055 tggtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagttgagtaaaatccttcgattttg 47786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 374 - 514
Target Start/End: Complemental strand, 41032801 - 41032661
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||  ||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||      
T  41032801 tcattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggc 41032702  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 377 - 663
Target Start/End: Complemental strand, 17869873 - 17869594
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||||||||||||||| |||||| ||||     ||||||||||||||||||||||||| |||||  ||||||| |||||||||| |||||||  |||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 576  Q
    || | | |||||| ||||| ||||||||||||||| ||||||||||| | ||| || |||||| | |||| |||||||||||||||||||||       |    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaactaagtcttttataaccatatacta-tttacaacatatatttagtattatta-ttttttg 17869681  T
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||| ||| ||||||||||||||||| |  |||| ||| ||  |||||| | ||||  | ||||||||||||| ||||||||||    
T  17869680 gtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctttgattttgatt 17869594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 465 - 658
Target Start/End: Original strand, 32881416 - 32881600
Alignment:
Q  465 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 564  Q
    |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatatacca-tttataacatatatttagtatt 32881514  T
Q  565 attannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 658  Q
     ||         |||||| |||||||||||||||||||||| |  |||||||||||| |||||||| | || || |||||||||||||||||||    
T  32881515 ttt--------tgtaaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgattt 32881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 373 - 509
Target Start/End: Complemental strand, 17056131 - 17055995
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||||| | ||||| |||||||||||||||| ||||||||||||||   ||||||      
T  17056131 atcattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataag 17056032  T
Q  473 aaaaatccattgattttaattgcgattttacgatttc 509  Q
     ||||||||| |||||| |||||||||||||||||||    
T  17056031 taaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc 451  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 374 - 480
Target Start/End: Complemental strand, 18337652 - 18337547
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||| ||| || | |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||||      
T  18337652 tcattgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggc 18337554  T
Q  474 aaaatcc 480  Q
    |||||||    
T  18337553 aaaatcc 18337547  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 376 - 471
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||| | | |||||||||||||  |||||||||||||||||||||  |||||||||||||||||| |||||||||  |||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 16434709 - 16434794
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||| ||||||| |||||||||||||||||  || | |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  16434709 ggtagaatccatcgattttgattgcgattt--tgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgatt 16434794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 453 - 557
Target Start/End: Original strand, 18228278 - 18228380
Alignment:
Q  453 tagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacat 552  Q
    |||||||||||||||||||  |||||||||  ||||| |||| ||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatatacca-tttataacat 18228375  T
Q  553 atatt 557  Q
    |||||    
T  18228376 atatt 18228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 376 - 463
Target Start/End: Complemental strand, 12800710 - 12800623
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 463  Q
    |||||||| |||||||  || |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcc 12800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 17055850 - 17055763
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||  ||||||||||| |||| |  ||||||| |||| |||||||| |||| || ||||||||||||||||||||||||    
T  17055850 ggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgatt 17055763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 34478900 - 34478833
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacga 442  Q
    ||||||||| ||||||| ||| |||||| |||||||  |||||||| |||||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 659
Target Start/End: Complemental strand, 41032701 - 41032621
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 659  Q
    ||||||||| |||||| |||||||||| |  |||||||||||| |||||||| || | || ||||||||| ||||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgatttt 41032621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 47785790 - 47785837
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgc 421  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||    
T  47785790 tcattgttgtcaaaatcccaacataaatcctaaaattcaggattttgc 47785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 593 - 663
Target Start/End: Complemental strand, 14074397 - 14074327
Alignment:
Q  593 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 14074327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 468
Target Start/End: Original strand, 8772715 - 8772796
Alignment:
Q  387 aatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||| ||| ||||||| ||||| ||| ||||||||||||| |  | ||||||| |||||||||||||| ||| ||||||||    
T  8772715 aatcccgacttaaatcccaaaatccagaattttgcgactttgtgtagcttcaacaactcaaatccatagcagagtcccaaaa 8772796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 468
Target Start/End: Original strand, 24117006 - 24117099
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||||||||| |  |  ||||| |||||||| | |||||| | ||||| |||||||||||||| ||||||  ||| |||||||||||||    
T  24117006 cattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaatttatattagaatcccaaaa 24117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 462
Target Start/End: Complemental strand, 27917578 - 27917495
Alignment:
Q  379 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 462  Q
    ||||||||||||| ||| ||||| || ||||  |||||||||||| ||| || ||||||||| || ||||| ||||| ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaatc 27917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 659
Target Start/End: Original strand, 30619156 - 30619223
Alignment:
Q  592 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 659  Q
    |||||||||||||| |  |||| | ||||| |||||||| |||| || ||||||||||||||||||||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttt 30619223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 468
Target Start/End: Complemental strand, 27502273 - 27502239
Alignment:
Q  434 cttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    |||||||||||||||||||||| ||||||||||||    
T  27502273 cttcaacgactcaaatccatagcagaatcccaaaa 27502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 9128871 - 9128831
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  9128871 aaaattcatcgattttgattgcgatttgacgatttcttata 9128831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Complemental strand, 9327246 - 9327206
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 147; Significance: 4e-77; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 372 - 663
Target Start/End: Original strand, 8439 - 8726
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    ||||||||||||||||||||  || ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||     
T  8439 aatcattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataa 8538  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||        
T  8539 gcaaaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataccatatatttagtattatt---t 8634  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||  || |  | |||||||||||||| |||||||||    
T  8635 ttttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgatt 8726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 9e-75; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 376 - 663
Target Start/End: Complemental strand, 15528239 - 15527954
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||  |||||||| ||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||  |           
T  15528139 aatccatcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatatacca-tttataacatatatttagtatta-aattttttg 15528042  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||  |||||||| ||||| ||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  15528041 ggggaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 15527954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 375 - 660
Target Start/End: Original strand, 23897810 - 23898092
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||  || |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||       
T  23897810 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 23897909  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||           
T  23897910 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt-ttttttttt 23898007  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     |||||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  23898008 tggtaaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttg 23898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 375 - 660
Target Start/End: Complemental strand, 30912542 - 30912253
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  |    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||| |||||||||||||||||||           
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatca-tttatcacatatatttagtattatttttttgt 30912344  T
Q  575 ng-----gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     |     ||||||||||| |||| |||||||||||  ||||||||||||||| ||| |||| |||| || || ||||||||||| ||||||    
T  30912343 ggtaaaagtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttg 30912253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 373 - 663
Target Start/End: Complemental strand, 17543872 - 17543574
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||      
T  17543872 atcattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataag 17543773  T
Q  473 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta---- 568  Q
     |||||| || |||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||        
T  17543772 caaaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatatacca-tttataacatatatttagtattattatttt 17543674  T
Q  569 -----nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
                |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  17543673 ttttttatttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 17543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 376 - 663
Target Start/End: Complemental strand, 26053425 - 26053140
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26053228  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||    
T  26053227 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgatt 26053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 376 - 663
Target Start/End: Complemental strand, 26073478 - 26073193
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26073281  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||    
T  26073280 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgatt 26073193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 7223518 - 7223800
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||       || |||||||||||||||| ||||||||   |    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatat----atttagtattattann 570  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    |||||||||||||       
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaatttagtattatt--t 7223707  T
Q  571 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
         ||||||||||||||||| |||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  7223708 tgtttggtaaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 7223800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 376 - 602
Target Start/End: Original strand, 17250057 - 17250280
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||  ||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||||| || ||||            
T  17250157 aattcattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatata--aatttataatatatatttattactatt-gtttttt 17250253  T
Q  576 ggtaaaatccattgattttgattgcga 602  Q
    |||||||||||||||||||||||||||    
T  17250254 ggtaaaatccattgattttgattgcga 17250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 19748332 - 19748618
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||| ||||||||| ||| |||||| || ||| |||||||||| || |||||||||||| || ||||||||||| ||||||||||  |||||||  |    
T  19748332 cattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggca 19748431  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||| ||| |||||| |||| |||||||||||||||||||||||||||||| || ||||||||| || ||||||| ||||||||||||||||||          
T  19748432 aaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatca-tttataaaatatatttagtattatta-ttttc 19748529  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  19748530 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 19748618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 372 - 663
Target Start/End: Original strand, 17103198 - 17103480
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||       || ||||||||||||||| |||||||||||||||||||||    
T  17103198 aatcattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatag 17103290  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
    | ||||||||| |||||| ||| |||||||||||||||||||||||||||| || || ||||||||| || ||||| ||||||||||| ||||| |        
T  17103291 acaaaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgactatatatca-tttatgacatatatttattattaat-ttt 17103388  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||| | ||||||    
T  17103389 tttaggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgatt 17103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 422 - 565
Target Start/End: Original strand, 21354786 - 21354928
Alignment:
Q  422 gactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaag 521  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21354786 gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaaaatccatcgttttttattgcgattttacgatttcttataaactaag 21354885  T
Q  522 tcatctatgactatataccattttataacatatatttagtatta 565  Q
    | || ||||||||||||||| |||||||||||||||||||||||    
T  21354886 taatttatgactatatacca-tttataacatatatttagtatta 21354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 375 - 641
Target Start/End: Complemental strand, 10509153 - 10508883
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    |||| |||||||||||| ||| ||||||||||||||||| | |||| |||||||||||| ||||| |||||||||  ||||||||||||||||||||  |    
T  10509153 cattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggca 10509054  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatatacc-----attttataacatatatttagtattattan 569  Q
    |||| ||| |||||| ||| ||||||||||| || |||||||||||||||| ||| ||||||||||       ||||||||||||||||| ||||||||     
T  10509053 aaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacctaagtcatttataacatatatttattattattat 10508955  T
Q  570 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcga 641  Q
          | ||||||||||  |||||||||||||||| |  |||||||||||| |||||||| |||| |||||    
T  10508954 tattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagtcga 10508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 398 - 542
Target Start/End: Complemental strand, 22498992 - 22498848
Alignment:
Q  398 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcga 497  Q
    |||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| |    
T  22498992 aaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatcgattttaattgcaa 22498893  T
Q  498 ttttacgatttcttataaactaagtcatctatgactatataccat 542  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  22498892 ttttacgatttcttataaacgaagtcatttatgactatataccat 22498848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 374 - 501
Target Start/End: Complemental strand, 6943591 - 6943464
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||     
T  6943591 tcattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagac 6943492  T
Q  474 aaaatccattgattttaattgcgatttt 501  Q
    ||||| ||| |||||| |||||||||||    
T  6943491 aaaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 375 - 514
Target Start/End: Complemental strand, 27233407 - 27233268
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||| | | ||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  475 aaatccattgattttaattgcgattttacgatttcttata 514  Q
    |||||||| |||||| |||||||||||| |||||||||||    
T  27233307 aaatccatcgattttgattgcgattttatgatttcttata 27233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 375 - 544
Target Start/End: Complemental strand, 11327701 - 11327532
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| |||| |||||||| || | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 544  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||||    
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccattt 11327532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 376 - 544
Target Start/End: Complemental strand, 7918510 - 7918342
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||   ||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 544  Q
    |||| || |||||| |||| |||||| |||||| ||||||| |||||||| |||||||||||| |||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcattt 7918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 379 - 535
Target Start/End: Complemental strand, 2912373 - 2912218
Alignment:
Q  379 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaat 478  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||| ||||||| || ||||||||| |||||| ||||||||||||  ||||||   |||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaataagcaaaat 2912275  T
Q  479 ccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactat 535  Q
     ||| |||||| ||||| |||||||||||| |||||||| ||||||| |||||||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 18491167 - 18491074
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||| ||||||||||| ||| ||||||||||||| ||| |||||||  |||| ||||||||||||||||||||||||||| ||||||||||||    
T  18491167 cattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaa 18491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 455
Target Start/End: Complemental strand, 5422878 - 5422798
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 455  Q
    ||||||||||||||||| ||| ||||| |||||||||| |||||||| ||||| |||||||||||||||||||||| ||||    
T  5422878 cattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 510 - 663
Target Start/End: Complemental strand, 7918343 - 7918194
Alignment:
Q  510 ttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatg 609  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||| |||||||||||||        |||||||||||| ||||||||||||||||| |      
T  7918343 ttataaattaagtcatttatgactatatatcattt-ataacataaatttagtattatt---tttttggtaaaatccatcgattttgattgcgattttaca 7918248  T
Q  610 atttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||| |||||  |||||||| ||||  | ||||||||| ||||||||||||||    
T  7918247 atttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgatt 7918194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 4842025 - 4841953
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||    
T  4842025 taaatcctaaaatt--ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataatag 4841953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccat 453  Q
    |||| ||||||| | ||| ||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 4841760 - 4841673
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||| ||| ||||||||||||||||| | ||||||||||  | |||||||| |||| || ||||||||||||| ||||||||||    
T  4841760 ggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgatt 4841673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 577 - 663
Target Start/End: Complemental strand, 2912191 - 2912105
Alignment:
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| | ||||||||||||||||| |  |||||||||| |||||||||| |||| || |||||||||||||| |||| ||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgatt 2912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 11327493 - 11327406
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  11327493 ggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgatt 11327406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 22498371 - 22498284
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||| ||| |||||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgatt 22498284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 453
Target Start/End: Complemental strand, 10958317 - 10958239
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccat 453  Q
    ||||||||||||||||  ||| ||||||  ||||||||||||||||||||||   |||||||||| || ||||||||||    
T  10958317 cattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaaggattcaaatccat 10958239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 480
Target Start/End: Original strand, 12245108 - 12245213
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| |||||| |||  |||||| |||||||||| ||||||||||||| ||||| ||||  || | |||||||| | | |||||||||| ||| |    
T  12245108 cattgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttcatggatttaaatccattgcaaaatcccaaaacagata 12245207  T
Q  475 aaatcc 480  Q
    ||||||    
T  12245208 aaatcc 12245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 468
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  403 ctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 468
Target Start/End: Original strand, 27890137 - 27890225
Alignment:
Q  379 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    |||||||||||| |||| ||| ||| |||||||||| |||||||||||| |  | ||| |||||||||||||||||  ||||||||||||    
T  27890137 gttgtcaaaatc-tgacttaagtcccaaaattcaggtttttgcgactttgtgtagctttaacgactcaaatccatatcagaatcccaaaa 27890225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 3573831 - 3573744
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||  ||| ||||||||||||||||| |  |||||||||||| ||||||||  ||| || ||||||| |||| |||||||||||    
T  3573831 ggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgattttgatt 3573744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 468
Target Start/End: Complemental strand, 18490987 - 18490922
Alignment:
Q  403 ctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||| ||| ||||||| ||||| |||||||||||||||| ||| |||||| | ||||||||||    
T  18490987 ctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaa 18490922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 620
Target Start/End: Complemental strand, 27233308 - 27233267
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttatat 620  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  27233308 aaaatccatcgattttgattgcgattttatgatttcttatat 27233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 468
Target Start/End: Complemental strand, 33583855 - 33583766
Alignment:
Q  379 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||||||  ||| ||| ||| ||||| |||||||||  ||||||  | | |||||||||||||||||||||| |||| |||||||    
T  33583855 gttgtcaaaatcgcgacttaagtcccaaaatccaggatttttagactttaattagcttcaacgactcaaatccatagcagaaacccaaaa 33583766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 468
Target Start/End: Complemental strand, 8285827 - 8285760
Alignment:
Q  401 tcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||| ||||||||||||||||  |  | ||||||||||||||||||| || | ||||||||||    
T  8285827 tcctaaaatccaggattttgcgacttgatctagcttcaacgactcaaatccacagcaaaatcccaaaa 8285760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 554
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  498 ttttacgatttcttataaac--taagtcatctatgactatataccattttataacatat 554  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatatacca-tttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 7359871 - 7359916
Alignment:
Q  399 aatcctaaaattcaggattttgcgactttcttcaccttcaacgact 444  Q
    |||||||||||| | ||||| |||||||| ||||||||||||||||    
T  7359871 aatcctaaaatttaagatttagcgactttattcaccttcaacgact 7359916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 8545087 - 8545030
Alignment:
Q  383 tcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaac 440  Q
    ||||||||| ||  |||||||||||||| ||||||||||||||||  |||| ||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgactttactcactttcaac 8545030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 17250155 - 17250195
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttata 619  Q
    ||||| ||||||||||||||||||||| | |||||||||||    
T  17250155 aaaattcattgattttgattgcgattttacgatttcttata 17250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 372 - 663
Target Start/End: Complemental strand, 31238110 - 31237820
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  31238110 aatcattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaatag 31238011  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattattann 570  Q
     |||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||      
T  31238010 gaaaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatgtattatta-t 31237913  T
Q  571 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
         |||||||||||| |||||||||||| |||| |  ||||  |||||| ||| |||| ||||  | ||||||||||||||||| ||||||    
T  31237912 tttttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgatt 31237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 377 - 659
Target Start/End: Complemental strand, 35566082 - 35565802
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    |||||||||||||||  || ||||||  ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||  |||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 576  Q
    |||||| |||||| |||||  |||||||||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||| ||        |    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaacaaagtcatttatgactatata-caatttataacatatatttagtattttt----ttttg 35565888  T
Q  577 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag---taaaatccttcgatttt 659  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| |||| || |||   |||||||||||||||||    
T  35565887 gtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaataaaatccttcgatttt 35565802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 375 - 660
Target Start/End: Complemental strand, 15588979 - 15588702
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||| ||||||||||| ||| ||| || ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| |    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    ||||| || | |||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||   || ||||||||||||||||||           
T  15588880 aaatcaatcgttttttattgcgattttacgatttcatataaactaagtcatttatgattatataccatt---tatcatatatttagtattatt---tttt 15588787  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     |||||||||||| ||||||||||||||||| || |||||||||||| || |||| |||||  | |||||||||||||||||||||    
T  15588786 tggtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgattttg 15588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 372 - 663
Target Start/End: Original strand, 1404779 - 1405068
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||     
T  1404779 aatcattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactat 1404878  T
Q  472 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 571  Q
      ||||||||| |||||| |||| ||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||| |||| | |||||       
T  1404879 gcaaaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacacca-tttataacatatacttaggaatattatta 1404977  T
Q  572 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
          | |||||||| |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  1404978 tttt-tttaaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 1405068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 374 - 544
Target Start/End: Original strand, 30432417 - 30432587
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||||||  ||||| |||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||     
T  30432417 tcattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagac 30432516  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 544  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30432517 aaaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccattt 30432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 374 - 663
Target Start/End: Original strand, 36429846 - 36430133
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    ||||||||||||||||||  || ||||||||| |||  |||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||      
T  36429846 tcattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggc 36429945  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 573  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||| || |||||||||||| || ||| |||||||||||||||||| ||          
T  36429946 aaaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatca-tttctaacatatatttagtatt-tttttttt 36430043  T
Q  574 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
      |||||||||||| |||||||||||| |||| |   ||| || |||| |||||||| || |  | |||||| |||||||||||||||||    
T  36430044 taggtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatccttcgattttgatt 36430133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 378 - 567
Target Start/End: Original strand, 31578007 - 31578194
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 477  Q
    |||||||||||||| ||| |||||  ||||||| | |||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||   ||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  478 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 567  Q
    |||||  ||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt 31578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 375 - 663
Target Start/End: Original strand, 20063713 - 20064008
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| |||| |||||||| || | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagt-attattannnnn 573  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| |||||||||| || |||| |||||| | ||||||          
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccattt-atcacatgtatttatttattatttatttt 20063911  T
Q  574 nn-------ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
             |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  20063912 attttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgatt 20064008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 375 - 505
Target Start/End: Complemental strand, 23863451 - 23863321
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| ||||| |||||||  || ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||  |    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  475 aaatccattgattttaattgcgattttacga 505  Q
    |||||||| ||||||  ||||||||||||||    
T  23863351 aaatccatcgattttggttgcgattttacga 23863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 660
Target Start/End: Complemental strand, 1690774 - 1690575
Alignment:
Q  459 aatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattt 558  Q
    |||||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||||||    
T  1690774 aatcccaaaataggcgaaacccattgattttgattgcgattttacgatttcttataaactaagtcttttatgactatatacca-tttataaaatatattt 1690676  T
Q  559 agtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 658  Q
    | ||||||||       ||||||||  || ||||||||||||||||| | || |||||||||| |||  ||| |||| ||  |||||| ||||||| |||    
T  1690675 aatattatta-ttttttggtaaaatttatcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttt 1690577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 378 - 509
Target Start/End: Complemental strand, 25539353 - 25539222
Alignment:
Q  378 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 477  Q
    |||||| ||||||| ||  |||||||||||||||| || ||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||   ||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  478 tccattgattttaattgcgattttacgatttc 509  Q
    ||||| |||||| | |||||||| ||||||||    
T  25539253 tccatcgattttgactgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 376 - 502
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatccta--aaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||  ||  |||||||||  ||||  ||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggt 19491953  T
Q  474 aaaatccattgattttaattgcgatttta 502  Q
    ||||||||| |||||| ||||||||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 1690892 - 1690796
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    ||||||||||||||  | ||| |||||| ||||||| ||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  1690892 cattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatag 1690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 5395778 - 5395682
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||||||||| |||| ||| || ||||||||||||||| |||||| ||||||||    
T  5395778 cattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatag 5395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 373 - 481
Target Start/End: Original strand, 15266079 - 15266187
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||  ||||| |||| |||||| || ||||||||||  || ||| |||||||||     
T  15266079 atcattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaatagg 15266178  T
Q  473 aaaaatcca 481  Q
    |||||||||    
T  15266179 aaaaatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    ||||||||||||||  |||| |||||| ||||||| |||||||| ||| ||| |||||||||||||| |||||||||||| ||||||| ||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 513 - 663
Target Start/End: Original strand, 16766922 - 16767070
Alignment:
Q  513 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 612  Q
    |||||| |||||| ||||||| ||||| |||| |||||| |||||||| ||||||        |||||| ||| ||||||||||||||||||| | ||||    
T  16766922 taaactgagtcatttatgactgtatacaattt-ataacaaatatttagcattatttttgttttggtaaa-tcctttgattttgattgcgattttacgatt 16767019  T
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| |||||| | |||| || |||||||||||||| |||||||||    
T  16767020 tcttatatcgattctataaaagtagttgagtaaaatccttcaattttgatt 16767070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 468
Target Start/End: Original strand, 34841584 - 34841648
Alignment:
Q  404 taaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaa 34841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 543 - 663
Target Start/End: Complemental strand, 13502637 - 13502517
Alignment:
Q  543 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 642  Q
    ||||||||||||||||| |||||||        |||||||||||| ||||||||||||||||| | ||||||||||||  |||||||| || | || ||     
T  13502637 tttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttgac 13502538  T
Q  643 taaaatccttcgattttgatt 663  Q
    ||| ||||||| |||||||||    
T  13502537 taatatccttcaattttgatt 13502517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 412 - 471
Target Start/End: Original strand, 31023259 - 31023318
Alignment:
Q  412 aggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  31023259 aggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaatag 31023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 543 - 663
Target Start/End: Complemental strand, 19262279 - 19262160
Alignment:
Q  543 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 642  Q
    ||||||||||||| ||||||||||||       |||||| ||| | ||||||||||||||||| |  |||||||||||| |||||||| ||||  | |||    
T  19262279 tttataacatatagttagtattattatttttt-ggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgag 19262181  T
Q  643 taaaatccttcgattttgatt 663  Q
    ||||||| |||||||||||||    
T  19262180 taaaatctttcgattttgatt 19262160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 663
Target Start/End: Complemental strand, 25539138 - 25538989
Alignment:
Q  513 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 612  Q
    |||||| |||||| ||||||||||||| || | ||||||||||||||| ||||||        ||||||||| || |||||||||||| |||| |  |||    
T  25539138 taaactgagtcatttatgactatatacaatat-ataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaatt 25539040  T
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    | ||||||| |||||||| |||| ||  ||||||||||||  |||||||||    
T  25539039 ttttatatcgattctacaaaagtagttcagtaaaatcctttaattttgatt 25538989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 663
Target Start/End: Original strand, 27406927 - 27407076
Alignment:
Q  513 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 612  Q
    |||||| |||||| ||| ||||||||| | ||||||| |||||||||| ||||||        ||| ||||||||  |||||||||||||||| ||||||    
T  27406927 taaactgagtcatttattactatatac-agtttataatatatatttagcattatttttgttttggtgaaatccatcaattttgattgcgattttatgatt 27407025  T
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||  ||| | || |||| || ||||||||| ||| ||||||||||    
T  27407026 tcttatattgattatccaaaagtagttgagtaaaattcttggattttgatt 27407076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 17995051 - 17995150
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 471  Q
    |||||||||||| ||||| | ||| |||| |||||||| ||| ||||||||| ||| |||||| |||||||||||||| | ||| | ||| |||||||||    
T  17995051 aatcattgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaatag 17995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 455
Target Start/End: Original strand, 19245149 - 19245232
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 455  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||| |||||||  ||| ||| | ||| ||||||||||||    
T  19245149 aatcattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgactttactcatctttagcgattcaaatccatag 19245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 30433013 - 30433100
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||  |||||||||||||||| |  ||||| |||||| |||||| | ||||  | |||||||||| |||||||||||||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgatt 30433100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 461
Target Start/End: Original strand, 24473335 - 24473420
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 461  Q
    |||||||||| ||||| |||| ||| ||| ||||||||||||||||||| |||  ||||||||||| | |||||||| ||| |||||    
T  24473335 cattgttgtcgaaatcgtgacttaagtcccaaaattcaggattttgcgattttactcaccttcaac-attcaaatccgtagcagaat 24473420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 27750282 - 27750194
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 463  Q
    ||||||||||||||||  ||| ||| ||| ||||| || ||||||||||||||  | | ||| |||||||||||||||||  |||||||    
T  27750282 cattgttgtcaaaatcgcgacttaagtcccaaaatacaagattttgcgacttttcttaacttaaacgactcaaatccataacagaatcc 27750194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 514
Target Start/End: Original strand, 16766987 - 16767026
Alignment:
Q  475 aaatccattgattttaattgcgattttacgatttcttata 514  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  16766987 aaatcctttgattttgattgcgattttacgatttcttata 16767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 15516667 - 15516610
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccata 454  Q
    |||||| ||| |||||| ||||||||||||| |||||||||||| | |||||| ||||    
T  15516667 taaatcttaatattcagcattttgcgactttattcaccttcaacaattcaaattcata 15516610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 374 - 663
Target Start/End: Original strand, 28745768 - 28746061
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||     
T  28745768 tcattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagac 28745867  T
Q  474 aaaatccattgattttaattgcgattttacgatttc------ttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 567  Q
    ||||| ||| |||||| |||||||||||||||||||      |||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||| |    
T  28745868 aaaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatacta-tttataacatatatttactattaat 28745966  T
Q  568 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
            |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  28745967 -ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgatt 28746061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 375 - 542
Target Start/End: Original strand, 29067283 - 29067450
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29067283 cattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaca 29067382  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccat 542  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29067383 aaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatataccat 29067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 374 - 658
Target Start/End: Original strand, 39427900 - 39428183
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    |||| ||||||||||||| ||  |||||  |||||| | ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||     
T  39427900 tcatcgttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagac 39427999  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 573  Q
    ||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||| |          
T  39428000 aaagtccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacta-cttataacatatatttagtattaattttttt 39428098  T
Q  574 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 658  Q
      |||||||||||| ||||||||||||||||| |  ||||| |||||| |||| ||| || |  | |||||||||||||||||||    
T  39428099 tgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgattt 39428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 375 - 656
Target Start/End: Complemental strand, 8156261 - 8155980
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa-tagaa 473  Q
    |||||||||||||||||  || ||||| ||||||||||| ||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||| ||||     
T  8156261 cattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattagac 8156162  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-nnnn 572  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||         
T  8156161 aaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatatacca-tttataacatatatttagtattattattatt 8156063  T
Q  573 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgat 656  Q
       |||||||||||  ||| ||||||||||||| |   |||||||||||||| ||||| |||| || |||||||||||||||||    
T  8156062 tttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgat 8155980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 374 - 663
Target Start/End: Complemental strand, 24620334 - 24620041
Alignment:
Q  374 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgac---tttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    |||||||||||||||| | ||| |||||||||||||| | |||||||||||   ||||||||||||||||||||||||| || ||||||||| |||||||    
T  24620334 tcattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaata 24620235  T
Q  471 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-- 568  Q
    |  ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||| |||      
T  24620234 ggcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatatacca-tttataaaatatatttagtatttttatt 24620136  T
Q  569 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
           |||||||||||   |||||||||||||||| |  ||||  |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  24620135 tttttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgatt 24620041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 376 - 660
Target Start/End: Original strand, 22137278 - 22137559
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||| | ||||||||||| |||||||||||||||| ||| || |||||||||||||||| |||| ||||||||||||||| ||||||||||||   ||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 575  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||| ||||||||||||| | |||||||| |||||||||||||||||           
T  22137378 aatccatcgattttaattgcgatttt-cgatttcttatttactaagtcatttatgactatatacta-tttataac-tatatttagtattattaatttttt 22137474  T
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
     |||||||||||  |||||||||  | ||| | ||||||||||||| |||||||| |||| || ||||||||| ||| |||||||    
T  22137475 tgtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttg 22137559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 449 - 659
Target Start/End: Original strand, 42696920 - 42697129
Alignment:
Q  449 tccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttata 548  Q
    |||||||||||||| ||||||||  ||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttata 42697018  T
Q  549 acatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaat 648  Q
    |||||||||| ||||| ||        |||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||| || || ||||||    
T  42697019 acatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaat 42697118  T
Q  649 ccttcgatttt 659  Q
    ||||| |||||    
T  42697119 ccttcaatttt 42697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 381 - 663
Target Start/End: Original strand, 17064326 - 17064592
Alignment:
Q  381 tgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 480  Q
    ||||||||||| ||| |||||| |||||||||||||||||||| | | ||||||||||||||||| ||| ||||||||||| | |||||||| ||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  481 attgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaa 580  Q
    || |||||| ||||||||||||||||||||||||||||||||||| |||||||||               |||||||||||||| ||        |||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaactaagtcatttatgactat---------------atatatttagtatt-ttttttttttggtaa 17064509  T
Q  581 aatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||| |||||||||||| |||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  17064510 aatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgatt 17064592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 377 - 525
Target Start/End: Complemental strand, 3449419 - 3449272
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 476  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||| |||||||  |||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  477 atccattgattttaattgcgattttacgatttcttataaactaagtcat 525  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaagtaagtcat 3449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 376 - 525
Target Start/End: Original strand, 20756039 - 20756188
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||||||||||||| ||| |||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||  ||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  476 aatccattgattttaattgcgattttacgatttcttataaactaagtcat 525  Q
    |||| || |||||| ||||| |||||||||||||||||||||||||||||    
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaactaagtcat 20756188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 385 - 568
Target Start/End: Original strand, 21963438 - 21963620
Alignment:
Q  385 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 484  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  485 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 568  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21963538 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 385 - 568
Target Start/End: Original strand, 21985874 - 21986056
Alignment:
Q  385 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 484  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  485 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 568  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21985974 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21986056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 376 - 502
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 475  Q
    |||||| ||||||||||||| |||||| |||||| | | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  476 aatccattgattttaattgcgatttta 502  Q
    ||| ||| |||||| ||||||||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 397 - 563
Target Start/End: Complemental strand, 22494889 - 22494731
Alignment:
Q  397 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 496  Q
    |||||||||||||    |||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||| | ||||| ||| |||||| ||||||    
T  22494889 taaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgattgcg 22494790  T
Q  497 attttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtat 563  Q
    ||||||||       |||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  22494789 attttacg-------ataaactaagtcagttatgactatatacca-tttataacatatatttagtat 22494731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 375 - 480
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||  |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  475 aaatcc 480  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 465 - 567
Target Start/End: Complemental strand, 15515296 - 15515195
Alignment:
Q  465 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 564  Q
    ||||||| |||||| | | |||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15515296 aaaataggaaaaattcgtcgattttaacttcgatttcacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 15515198  T
Q  565 att 567  Q
    |||    
T  15515197 att 15515195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 373 - 522
Target Start/End: Complemental strand, 25870508 - 25870350
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttc----aacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||||||||||||  ||| ||||||||||||| || ||||||| ||||||||||| ||||    |||||||||||| | |||||||| | |||||    
T  25870508 atcattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaa 25870409  T
Q  469 tagaaaaaatcca-----ttgattttaattgcgattttacgatttcttataaactaagt 522  Q
    |||  ||||||||     |||||||| |||||||||||||||||||||||||| |||||    
T  25870408 taggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaattaagt 25870350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 375 - 525
Target Start/End: Complemental strand, 22356183 - 22356032
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaa 473  Q
    ||||||| ||||||| | ||| |||||||||||||||||||||||  || ||| || || ||||||| | |  ||| ||||||||||||| ||||||       
T  22356183 cattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataagc 22356084  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 525  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  22356083 aaaatccatgaattttgattgcgattttacgatttcttataaactaagtcat 22356032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 24649818 - 24649724
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    |||||||||||||||| ||| |||||| ||||||  ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaata 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 15806635 - 15806543
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||||||||||| ||| ||||||||| ||| ||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaa 15806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 27676634 - 27676721
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||| |||| |||| || |||||||||| |||||||||||||    
T  27676634 ggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgatt 27676721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 17796374 - 17796473
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    ||||||||||||||||| | ||| |||||| ||||||  |||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  17796374 atcattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 17796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 19104814 - 19104913
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    ||||||||||||||||| | ||| |||||| ||||||  |||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  19104814 atcattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 19104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 10873053 - 10872971
Alignment:
Q  398 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 480  Q
    |||||||||||| |||||||||| ||  || ||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  10873053 aaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 660
Target Start/End: Complemental strand, 25870294 - 25870169
Alignment:
Q  533 tatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacaga 632  Q
    |||||||||||| ||||||||||||||||||||||        |||||||||||| ||||||||||||||||| |  |||||||||||| |||||||| |    
T  25870294 tatataccattt-ataacatatatttagtattatt-gttttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaa 25870197  T
Q  633 agtggtcgagtaaaatccttcgattttg 660  Q
      | || ||||||||||||| |||||||    
T  25870196 cttagttgagtaaaatcctttgattttg 25870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 6136500 - 6136413
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||| ||||| | ||||||||||||| |||||| | |||| || |||||||||| || ||||||||||    
T  6136500 ggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatcttttgattttgatt 6136413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 576 - 663
Target Start/End: Original strand, 13286142 - 13286229
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| |||||| |||| ||||| | ||||||||||||| |||||||| |||| || |||||||||| || ||||||||||    
T  13286142 ggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatcttttgattttgatt 13286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 455
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  377 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 455  Q
    ||||||||||||| | ||  |||||| |||||||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 576 - 662
Target Start/End: Original strand, 28135960 - 28136046
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgat 662  Q
    ||||||||  ||||||||||||| | |||| |  |||||||||||||||| |||| |||| || |||||||||||||||||||||||    
T  28135960 ggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgat 28136046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 17796265 - 17796364
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||||| |||||||||| |  || |||||| ||||||  ||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796265 atcattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 17796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 17796483 - 17796582
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||||||||||||||||   ||  |||||| ||||||  |||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796483 atcattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 17796582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 19104705 - 19104804
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||||| |||||||||| |  || |||||| ||||||  ||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104705 atcattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 19104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 19104923 - 19105022
Alignment:
Q  373 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 472  Q
    |||||||||||||||||   ||  |||||| ||||||  |||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104923 atcattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 19105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 663
Target Start/End: Original strand, 20756188 - 20756307
Alignment:
Q  543 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 642  Q
    |||||||||||||||||||||||||        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| || |  | |||    
T  20756188 tttataacatatatttagtattatt-tcttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgag 20756286  T
Q  643 taaaatccttcgattttgatt 663  Q
    ||||||| ||| |||||||||    
T  20756287 taaaatctttcaattttgatt 20756307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 660
Target Start/End: Complemental strand, 3449241 - 3449157
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||||||  |||||||||||||||| |   ||||||||||| |||||||| |||| || || ||||||| ||||||||||    
T  3449241 ggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgattttg 3449157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 576 - 658
Target Start/End: Original strand, 29067475 - 29067557
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 658  Q
    |||||||||||| ||||||||||||||||| |  | |||  |||||||||||||| || |  | |||||||||||||||||||    
T  29067475 ggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcgattt 29067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 13005927 - 13006019
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    |||||||||||||||  ||| |||||   ||||||||  ||||||||||||| |||||||| |||   |||||||||||| | ||||||||||    
T  13005927 attgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctttaacatttcaaatccatagcaaaatcccaaaa 13006019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 474 - 514
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 42696870 - 42696914
Alignment:
Q  380 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgac 424  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttgcgac 42696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 10872646 - 10872559
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||  ||||| |||  ||||| | ||||||||||||| ||||| || |||| ||  ||||||||||||| |||||||||    
T  10872646 ggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgatt 10872559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 514
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 619 - 663
Target Start/End: Original strand, 22971050 - 22971094
Alignment:
Q  619 atcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||  | ||||||||||||||||||||||||    
T  22971050 atcaattctacaaaagtccttgagtaaaatccttcgattttgatt 22971094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 25870250 - 25870210
Alignment:
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttacaatttcttata 25870210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 120; Significance: 5e-61; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 375 - 663
Target Start/End: Complemental strand, 7585 - 7299
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||| | ||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||| |||||||  |    
T  7585 cattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggca 7486  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 574  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||  ||| ||||||||||||||||||||           
T  7485 aaattcatcgattttaattgcgattttacgatttcttataaacgaagtaatttatgaatatatacca-attagaacatatatttagtattatt-gttttt 7388  T
Q  575 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
     |||||||| ||| ||||||||||||||||  |  ||||| |||||| |||| ||| ||||  | ||||||||||||||||||||||||    
T  7387 tggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgatt 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 375 - 663
Target Start/End: Complemental strand, 93834 - 93549
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||||| ||| ||||||||||||| ||| ||||||  | |||||||||| ||||| |||||||||||||| ||||| | |||||||       
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  475 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgact-atataccattttataacatatatttagtattattannnnn 573  Q
    |||||||| |||||| ||||||||||||||||||||| |||| |||||| | ||||||| |||||| | || ||||||||||||||||| ||||          
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacga-ttcataacatatatttagtaatatt-tgttt 93639  T
Q  574 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
      |||||||||||| ||||||||||||||||| | ||||| ||||||| |||||||| |||| || || |||||||||||||||||||||    
T  93638 ttggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgatt 93549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 375 - 514
Target Start/End: Complemental strand, 231 - 91
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata-gaa 473  Q
    ||||||||  || |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| |      
T  231 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 132  T
Q  474 aaaatccattgattttaattgcgattttacgatttcttata 514  Q
    ||||||||| |||||| |||| |||||||| ||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttata 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 660
Target Start/End: Complemental strand, 131 - 51
Alignment:
Q  579 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 660  Q
    ||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttg 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 513 - 663
Target Start/End: Complemental strand, 8952 - 8803
Alignment:
Q  513 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 612  Q
    |||||| |||||| ||||||||||||| | || ||||||||||||||| |||||         |||||||||||| ||||||||||||||||| |  | |    
T  8952 taaactgagtcatttatgactatatacaactt-ataacatatatttagcattatctttgttttggtaaaatccatcgattttgattgcgattttacaagt 8854  T
Q  613 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||| |||||||| |||| || ||||||||||||||||||||||||    
T  8853 tcttatatctattctacaaaagtagttgagtaaaatccttcgattttgatt 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 455
Target Start/End: Complemental strand, 9153 - 9070
Alignment:
Q  372 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 455  Q
    |||||||||||||||||||||||  |||||  ||||||  ||||||||| || ||| |||||||||||||||||||||||||||    
T  9153 aatcattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatag 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 3e-19; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 48918 - 48825
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 468  Q
    ||||||||| ||||| | ||| |||||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 578 - 663
Target Start/End: Complemental strand, 48591 - 48506
Alignment:
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||| ||||| ||||||||| ||||||| | || ||||| |||| |||||||| |||| ||  |||||||||||||||||||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgatt 48506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 578 - 663
Target Start/End: Complemental strand, 61243 - 61158
Alignment:
Q  578 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||| ||||| ||||||| || |||||| | |||||| |||||| |||||||| |||| ||  |||||||| ||||||||||||||    
T  61243 taaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgatt 61158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 61472 - 61418
Alignment:
Q  416 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 470  Q
    |||||||||||| ||| |||||||||  |||||||||||  ||||||||||||||    
T  61472 ttttgcgactttattcgccttcaacggttcaaatccatatgagaatcccaaaata 61418  T

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Target: scaffold0016 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 576 - 663
Target Start/End: Complemental strand, 56356 - 56269
Alignment:
Q  576 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  56356 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 56269  T

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Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 58790 - 58746
Alignment:
Q  497 attttacgatttcttataaactaagtcatctatgactatatacca 541  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatatacca 58746  T

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Target: scaffold0036 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 375 - 480
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  375 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 474  Q
    ||||||||||||||| | ||| |||||  |||||||||| ||||||| | ||| |||||||||||| |||||||||||||| ||||||  |||||||  |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  475 aaatcc 480  Q
    ||||||    
T  37196 aaatcc 37191  T

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Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 461
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  376 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 461  Q
    |||||||||||||||  ||| ||||| ||||||||||  ||||||  ||||| |||||||| |||||||||||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

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Target: scaffold0534 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 885 - 955
Alignment:
Q  593 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 663  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| ||||||||||||||    
T  885 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgatt 955  T

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Target: scaffold1892 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1892
Description:

Target: scaffold1892; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 479
Target Start/End: Original strand, 886 - 951
Alignment:
Q  414 gattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 479  Q
    ||||||||||||||  | | ||||||| ||||||||| |||| ||||||||||||||| |||||||    
T  886 gattttgcgactttacttatcttcaacaactcaaatcgatagcagaatcccaaaataggaaaaatc 951  T

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