View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16102_low_10 (Length: 282)
Name: NF16102_low_10
Description: NF16102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16102_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 48463284 - 48463021
Alignment:
| Q |
1 |
aagaacatgcaaaaagtagaaatcttgtgtgtgaaagaaagaaacagaaaattattaaggaagcaccaaccttaaacatgcagtagtttgtttcagttga |
100 |
Q |
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| T |
48463284 |
aagaacatgcaaaaagtagaaatattgtgtgtgaaagaaagaaacagaaaattattaaggaagcaccaaccttaaacatgcagtagtttgtttcagttga |
48463185 |
T |
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| Q |
101 |
ttgatgtttgttttgttttcaaggaggtagctgctattcttgttaaatttgcagcattcggagttaataaagagagatatgattgatgttgaagagtaga |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48463184 |
ttgatgtttgttttgttttcaaggaggtagct---attcttgttaaatttgcagcattcggagttaataaagagagatatgattgatgttgaagagtaga |
48463088 |
T |
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| Q |
201 |
aatagaaatagaaagtggaaggaaattgtgggagggaaaaactatgacttagtaagagttgattagt |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48463087 |
aatagaaatagaaagtggaaggaaattgtgggagggaaaaactatgacttagtaagagttgattagt |
48463021 |
T |
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