View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16104_high_7 (Length: 357)
Name: NF16104_high_7
Description: NF16104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16104_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 15364917 - 15365195
Alignment:
| Q |
1 |
aagtttaaaatgtgacatctctgagcctcacttttataattgtgggcacaaaaatacatc---aggagacattgcacacagattaaagaaacaaaaaatg |
97 |
Q |
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|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |
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| T |
15364917 |
aagtttaaaatgtgacatctctgagcttcatttttataattgtgggcacaaaaatacgttctaaggaggcattgcacacagattaaagaaacaaaaaatg |
15365016 |
T |
|
| Q |
98 |
tcactaatgaaggaagatcaaaacagaaacggggcgtcatagtacccctgaaaatgggagaattcacacactaccaacataattaacttgtaatgctaaa |
197 |
Q |
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||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | |
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| T |
15365017 |
tcactaatgaaagaagatcaaaacaaaaacggggcgtcatagtaccc-tgaaaatgggagaattcacacactaccaacgtaattaacttgtaatgctaca |
15365115 |
T |
|
| Q |
198 |
ttacgtaggccatgttgttttaacagtaggactaatgtttgccaataaataccaaacgtgtacatttttcagaacacaca |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
15365116 |
ttacgtaggccatgttgttttaacagtaggactaatgtttaccaataaataccaaacgtgtacatttttcagaacacaca |
15365195 |
T |
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