View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16104_low_19 (Length: 285)
Name: NF16104_low_19
Description: NF16104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16104_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 27099041 - 27099316
Alignment:
| Q |
1 |
cattgcagcagccgcggcactctcccttgtgatcgcggttattttgcggtggaagttccggtgacagccgcaggctgcacattggaggctgtttaccgcg |
100 |
Q |
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| T |
27099041 |
cattgcagcagccgcggcactctcccttgtgatcgcggttattttgcggtggaagttccggtgacagccgcaggctgcacattggaggctgtttaccgcg |
27099140 |
T |
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| Q |
101 |
gatggcgatgagtcatcgatggtgaattcaccgcagccgtcggtggcgtagcttccaaggcttgctgcatggtttcttaaacactctctgtagatatagt |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27099141 |
gatggcgatgagtcgtcgatggtgaattcaccgcagccgtcggtggcgtagcttccaaggcttgctgcatggtttcttaaacactctctgtagatatagt |
27099240 |
T |
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| Q |
201 |
tttgtgaatgtgatgatgaagatgataacattcctcctccttccattgtttttatttattattttctctctctctg |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27099241 |
tttgtgaatgtgatgatgaagatgataacattcctcctccttccattgtttttatttattattttctctctctctg |
27099316 |
T |
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