View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16105_low_3 (Length: 659)
Name: NF16105_low_3
Description: NF16105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16105_low_3 |
 | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 410; Significance: 0; HSPs: 29)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 16 - 637
Target Start/End: Original strand, 6713391 - 6714012
Alignment:
| Q |
16 |
ctagagattcttttgataaaaacatatgtttgaggatgcttatatacatacaattgactgtacacctaatcattggttcatattttataggaatggaagt |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6713391 |
ctagagattcttttgataaaaacatatgtttgaggatgcttatatacatacaattgactgtacacctaatcattggttcatattttataggaatgaaagt |
6713490 |
T |
|
| Q |
116 |
gttaatatcaagaatattgttcaacgtgttagccgttttctagataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaag |
215 |
Q |
| |
|
| ||||||||||||| ||| ||| ||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
6713491 |
gcagatatcaagaatatagttgaacatgtcacccgtttgctagataagacagacttatttgttgttgaatatccagtcggtgtcagatctcgagtggaag |
6713590 |
T |
|
| Q |
216 |
ctgcgactgggtttatagatttcaaaaattcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctat |
315 |
Q |
| |
|
|| |||| || || || || |||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||| || |
|
|
| T |
6713591 |
atgtgactaatttactaaatatccaaaattcaaatgatgttttacttttagggatctggggaatggggggcttgggcaaaacaacccttgccaaagccat |
6713690 |
T |
|
| Q |
316 |
ttataataaaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaa |
415 |
Q |
| |
|
||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6713691 |
ttataatcaaattggtatcaaatttgagggaaggagctttcttctaaacattagggaagtttgggagacagatactaatcaagtttctctacagcaacaa |
6713790 |
T |
|
| Q |
416 |
gtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttc |
515 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6713791 |
atactttgtgatgtttacaaaacaacagaactcaagatacttgacattgaatcagggaaaaatttattgaaggaaagacttgctcagaaaagggtacttc |
6713890 |
T |
|
| Q |
516 |
ttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaaggga |
615 |
Q |
| |
|
|||||||||||||||||| | || ||||||||||||| |||||||||||||||| | |||||||||||| ||||||||| |||| ||||||||||| || |
|
|
| T |
6713891 |
ttgtgcttgatgatgtgaataaactggaccaactaaaggctttgtgtggaagccgcaaatggtttggtccggggagtagagtaatcatcacaacaagaga |
6713990 |
T |
|
| Q |
616 |
tatgcatcttcttaggtcgtgt |
637 |
Q |
| |
|
||||| ||||||||| |||||| |
|
|
| T |
6713991 |
tatgcgtcttcttagatcgtgt |
6714012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 59 - 630
Target Start/End: Complemental strand, 6535996 - 6535425
Alignment:
| Q |
59 |
atacatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttctag |
158 |
Q |
| |
|
|||||||||||||| | | | | | ||||||||||||||||||||||||||| ||||| | ||||||||||| ||||| ||| ||||| ||||| |||| |
|
|
| T |
6535996 |
atacatacaattgattctgctctttatcattggttcatattttataggaatgaaagtgatgatatcaagaatgttgttgaacatgttactcgtttgctag |
6535897 |
T |
|
| Q |
159 |
ataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgtttt |
258 |
Q |
| |
|
||| || ||| |||||||||| |||| |||||||||| ||| |||||| ||| ||||||| ||| | | || | || |||| || ||||||| || |
|
|
| T |
6535896 |
ataggaaagagttatttgttgctgaacatccagtgggaattgaatctcgtgtgcaagctgcaactaagctattaaacatccaaaacgcagaagatgtctt |
6535797 |
T |
|
| Q |
259 |
acttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttctt |
358 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| | ||||| |||| |||||| ||| |
|
|
| T |
6535796 |
acttctagggatatggggaatggggggtataggcaaaacaaccattgccaaagccatttataatgaaattggtagcaagtttgatggaaagagcttcctt |
6535697 |
T |
|
| Q |
359 |
ctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatg |
458 |
Q |
| |
|
|| || || ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||| || |
|
|
| T |
6535696 |
ctgaatataagggaattttgggagacaggtactaatcaagtttcactacagcaacaagtactttgtgatgtttacaaaacaacttcattcaagatacgtg |
6535597 |
T |
|
| Q |
459 |
acatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgcttt |
558 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||| |||||||||||||| || |||| ||||||||||| | |||||||||||||||||| ||||| |
|
|
| T |
6535596 |
acattgaatcagggaaaaatatattgaagcaaagactttcccagaaaagggtattttttgtacttgatgatgttaatgaattggaccaactaaaggcttt |
6535497 |
T |
|
| Q |
559 |
gtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttag |
630 |
Q |
| |
|
||||||||||| | |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6535496 |
gtgtggaagccgagaatggtttggttcggggagtagaataatcatcacaacaagggatatgcatcttcttag |
6535425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 61 - 627
Target Start/End: Original strand, 6813399 - 6813965
Alignment:
| Q |
61 |
acatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttctagat |
160 |
Q |
| |
|
||||||||||||| || ||| ||||| ||| || |||| |||||| | ||||| | || |||||||||||||| ||| ||| | |||||| ||||| |
|
|
| T |
6813399 |
acatacaattgaccgtgagccttatcatatgttaatgttttgtaggaacgaaagtgatgatgtcaagaatattgttgaacatgtcacccgtttgttagat |
6813498 |
T |
|
| Q |
161 |
aagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttttac |
260 |
Q |
| |
|
| |||||| ||||| |||| |||| ||||||||||||| | |||||| |||||| ||| |||| | || | || |||| ||| |||||||||||| |
|
|
| T |
6813499 |
aggacagagttattcgttgctgaacatccagtgggtgtagaatctcgcgtggaaactgtgactaaactactaaacatcgaaaactcagaagatgttttac |
6813598 |
T |
|
| Q |
261 |
ttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttct |
360 |
Q |
| |
|
|| |||||||||||||||||||||| || || ||||||||| |||||||||| ||||||||| ||||||| | | |||||||||||||||||||||||| |
|
|
| T |
6813599 |
ttctagggatatggggaatggggggtatgggtaaaacaacccttgccaaagcaatttataatcaaattgggagcaaatttgagggaaggagctttcttct |
6813698 |
T |
|
| Q |
361 |
aaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgac |
460 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||| | | |||||||||||||| |
|
|
| T |
6813699 |
gaacattagggaactttgggagacagatactaatcaagtttctctacagcaacaaatactttgtgatgtttgcaaaacaacggcattcaagatacatgac |
6813798 |
T |
|
| Q |
461 |
atcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgt |
560 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||| ||||||||| || ||||| ||||||| |
|
|
| T |
6813799 |
atcgaatcagggaaaaatatattgaaggaaagactttcccagaagaaggtacttcttgtgcttgatgatgtgaatgaattggagcagctaaaggctttgt |
6813898 |
T |
|
| Q |
561 |
gtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttct |
627 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||||||||||||||||| || |||||| |||||| |
|
|
| T |
6813899 |
gtggaagccacgaatggtttggtctgggcagtagaataataatcacaactagaaatatgcgtcttct |
6813965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 74 - 635
Target Start/End: Complemental strand, 6624758 - 6624197
Alignment:
| Q |
74 |
tgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttctagataagacagacttat |
173 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||| || | |||||| ||||||| |||||| |||| |
|
|
| T |
6624758 |
tgtacacctcatcattggttcatgttttataggaatgagagtgcagatatcaagaatattgttaaacacgtgacccgtttgctagataggacagaattat |
6624659 |
T |
|
| Q |
174 |
ttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttttacttttagggatatg |
273 |
Q |
| |
|
| |||| |||| ||||||||||||| | |||||| ||||| |||| |||| | | | || || |||| || ||||||||||||||||||| ||||| |
|
|
| T |
6624658 |
tcgttgctgaacatccagtgggtgtagaatctcgtgtggatgctgtgactaagctactcaatatccaaaactccgaagatgttttacttttaggaatatg |
6624559 |
T |
|
| Q |
274 |
gggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttctaaacattagggaa |
373 |
Q |
| |
|
|||||||||||| | || |||||||||||||||||||| ||||||||| ||||||| | | ||| || ||| ||||||||||| | || || || ||| |
|
|
| T |
6624558 |
gggaatggggggtgtgggtaaaacaaccattgccaaagcgatttataatcaaattgggagaaaattcgatggacggagctttcttttgaatataagagaa |
6624459 |
T |
|
| Q |
374 |
ttttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcaggga |
473 |
Q |
| |
|
||||| ||||||||| | ||||| |||||||| || |||||| |||||| |||||||||||||||||| | | ||||||||| || ||||||||||||| |
|
|
| T |
6624458 |
ttttgcgagacagatgccaatcatgtttctctgcaacaacaaatactttgtgatgtttacaaaacaacggcattcaagatacgcgatatcgaatcaggga |
6624359 |
T |
|
| Q |
474 |
aaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacgg |
573 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |
|
|
| T |
6624358 |
aaaatatattgaaggaaagacttgcccagaatagggtacttcttgtgcttgatgatgtgaatgaattggaccaactaaaggctttgtgtggaagccgtga |
6624259 |
T |
|
| Q |
574 |
atggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttaggtcgt |
635 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
6624258 |
atggtttggtccggggagtagaattatcatcacaacaagggatatgcatcttcttaggtcgt |
6624197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 58 - 629
Target Start/End: Complemental strand, 6500693 - 6500122
Alignment:
| Q |
58 |
tatacatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttcta |
157 |
Q |
| |
|
|||||| |||||||| ||| ||||| |||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||| || | |||||| ||| |
|
|
| T |
6500693 |
tatacagacaattgattgtgcaccttatcaatggttcatatattataggaatgaaagtgaagatatcaagaatattgttcaacgcgtcacccgtttgcta |
6500594 |
T |
|
| Q |
158 |
gataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttt |
257 |
Q |
| |
|
|||| |||||| |||||||||| |||| ||||||||||| | | |||||| ||||||||||||||| | | || | | ||||| |||||||||| | |
|
|
| T |
6500593 |
gataggacagagttatttgttgctgaacatccagtgggtttagaatctcgtgtggaagctgcgactaagctgctaaacataaaaaacacaaaagatgtct |
6500494 |
T |
|
| Q |
258 |
tacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttct |
357 |
Q |
| |
|
|| || |||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||| ||||||| | ||||||||| |||||||| || |
|
|
| T |
6500493 |
taattctagggatatggggaatggggggtacgggcaagacaaccattgccaaagccatttataatcaaattgggagcgaatttgagggtaggagcttcct |
6500394 |
T |
|
| Q |
358 |
tctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacat |
457 |
Q |
| |
|
||| || || ||||| |||||||| |||||||||||||| ||||| ||||||||| | || |||| ||||||||||||||||||| || ||||||||| | |
|
|
| T |
6500393 |
tctgaatataagggagttttgggaaacagatactaatcaagtttcactacagcaaaaggtgctttgtgatgtttacaaaacaacaaaattcaagatacgt |
6500294 |
T |
|
| Q |
458 |
gacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctt |
557 |
Q |
| |
|
||||| |||||||||||||| ||||||| | |||||||| | ||||||| ||||||| |||||||||||||||||| ||| |||| |||||||| |||| |
|
|
| T |
6500293 |
gacatagaatcagggaaaaacatattgaggcaaagactttctcagaaaaaggtactttttgtgcttgatgatgtgaacgaactggatcaactaaaggctt |
6500194 |
T |
|
| Q |
558 |
tgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttctta |
629 |
Q |
| |
|
||| |||||||| || |||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
6500193 |
tgtttggaagccgcgaatggtttggtccggggagtagaataattatcacaacaagagatttgcatcttctta |
6500122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 63 - 629
Target Start/End: Original strand, 6750474 - 6751040
Alignment:
| Q |
63 |
atacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttctagataa |
162 |
Q |
| |
|
|||||| ||| ||| ||||||||||||| ||||||||||| ||||||| |||| | || |||||||||||| ||| ||| | |||||| |||||| |
|
|
| T |
6750474 |
atacaactgattgtgcacctaatcattgattcatattttacaggaatgaaagttcagaaataaagaatattgttgaacatgtcatccgtttgttagatag |
6750573 |
T |
|
| Q |
163 |
gacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttttactt |
262 |
Q |
| |
|
|||||| |||||||||| |||| |||| |||||||| | |||||| ||||||||||||||| | | | | || |||| ||| ||||||| || | |
|
|
| T |
6750574 |
gacagagttatttgttgctgaacatccggtgggtgtagaatctcgtgtggaagctgcgactaagctccttaacatccaaaaatcagaagatgtgtttatg |
6750673 |
T |
|
| Q |
263 |
ttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttctaa |
362 |
Q |
| |
|
|||||||||||||||||||||| | || |||||||||||||||||||| ||||| ||| ||||||| | | |||||||||||||||||| ||| | |
|
|
| T |
6750674 |
ctagggatatggggaatggggggtacgggtaaaacaaccattgccaaagccatttacaatgaaattgggagcaaatttgagggaaggagcttccttatgg |
6750773 |
T |
|
| Q |
363 |
acattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacat |
462 |
Q |
| |
|
| || |||||||||||||||||| |||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||| || ||||||||| |||||| |
|
|
| T |
6750774 |
atataagggaattttgggagacacatactaatcaagtttcactacagcaacaagtactctgtgatgtttacaaaacaacaaaattcaagatacgtgacat |
6750873 |
T |
|
| Q |
463 |
cgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgt |
562 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
6750874 |
agaatcagggaaaaacatattgaagcaaagacttgcccagaatagggtacttcttgtgcttgatgatgtgaatgaattggaccaactaaaagctttgtgt |
6750973 |
T |
|
| Q |
563 |
ggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttctta |
629 |
Q |
| |
|
||||||| | |||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||| |
|
|
| T |
6750974 |
ggaagccgtgaatggtttggtccagggagtagaataatcatcacaacaagaaatatggatcttctta |
6751040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 57 - 630
Target Start/End: Original strand, 6794065 - 6794638
Alignment:
| Q |
57 |
atatacatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttct |
156 |
Q |
| |
|
|||||||||||||||| || ||||| |||||| ||||||||||||||||||| ||||| | ||||||||||||||||| ||| ||| | | |||| || |
|
|
| T |
6794065 |
atatacatacaattgatagtgcaccttatcattatttcatattttataggaatgaaagtgctgatatcaagaatattgttgaacatgtcaccggtttgct |
6794164 |
T |
|
| Q |
157 |
agataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgtt |
256 |
Q |
| |
|
| || |||||| |||||||||| |||| ||||||||||| | | |||||| ||||||| ||||||| | | || | ||||||| ||| ||||||| |
|
|
| T |
6794165 |
tggtaggacagagttatttgttgctgaacatccagtgggtttagaatctcgtgtggaagttgcgactaagctgctaaacatcaaaaactcagaagatgta |
6794264 |
T |
|
| Q |
257 |
ttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttc |
356 |
Q |
| |
|
||| || |||||||||||||||||||||| || || ||||||||| |||| ||||| ||| ||||| ||||||| | | |||||||||||||||||| | |
|
|
| T |
6794265 |
ttaattctagggatatggggaatggggggtatgggaaaaacaacccttgctaaagccattcataatcaaattgggagcaaatttgagggaaggagcttcc |
6794364 |
T |
|
| Q |
357 |
ttctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacaga-actcaagatac |
455 |
Q |
| |
|
|| | |||||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||| || | || | |||| |||| |
|
|
| T |
6794365 |
ttttgaacattagggaagtttgggacacagatactaatcaagtttctctacagcaacagatacttcatgatgtttacaaagca-ctgacattcaaaatac |
6794463 |
T |
|
| Q |
456 |
atgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgc |
555 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| || |
|
|
| T |
6794464 |
gtgatatagaatcagggaaaaatatattgaaggaaagacttgcccagaaaaggatacttcttgtgcttgatgatgtgaatgaattggaccagctaaaggc |
6794563 |
T |
|
| Q |
556 |
tttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttag |
630 |
Q |
| |
|
|||||||| |||| | |||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
6794564 |
attgtgtggtagccgcaaatggtttggtccggggagtagaataataatcacaacaagaaatattcatcttcttag |
6794638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 24 - 630
Target Start/End: Complemental strand, 6590416 - 6589810
Alignment:
| Q |
24 |
tcttttgataaaaacatatgtttgaggatgcttatatacatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatat |
123 |
Q |
| |
|
||||||| || || |||||||| ||| ||||| | || ||||||||||| ||| ||||| |||||| ||||||||||||||||||| ||||| | |||| |
|
|
| T |
6590416 |
tcttttggtagaagcatatgttggagaatgctgacatccatacaattgattgtgcaccttttcattgtttcatattttataggaatgaaagtgctgatat |
6590317 |
T |
|
| Q |
124 |
caagaatattgttcaacgtgttagccgttttctagataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgact |
223 |
Q |
| |
|
||||||||||||| ||| | | |||||| |||||| |||||| ||||| |||| |||| ||||||||||||| | |||||| |||||||||| |||| |
|
|
| T |
6590316 |
caagaatattgttgaacacatcacccgtttgttagataggacagagttattcgttgctgaacatccagtgggtgtagaatctcgtgtggaagctgtgact |
6590217 |
T |
|
| Q |
224 |
gggtttatagatttcaaaaattcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataata |
323 |
Q |
| |
|
| | || | || |||| ||| | ||||||||| |||| |||||||||||||||||||| || || ||||||||| |||||||||| ||||||||| |
|
|
| T |
6590216 |
aagctactaaacatccaaaactcagatgatgttttaattttggggatatggggaatggggggtatggggaaaacaacccttgccaaagcaatttataatc |
6590117 |
T |
|
| Q |
324 |
aaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttc |
423 |
Q |
| |
|
||||||| | | |||||||||||||||||||||||| || || || || || |||||||||||||||||||| ||||||||||||||| | ||||| |
|
|
| T |
6590116 |
aaattgggagcaaatttgagggaaggagctttcttctgaatataagagagttatgggagacagatactaatcaagtttctctacagcaaaagatacttga |
6590017 |
T |
|
| Q |
424 |
tgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgctt |
523 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||| | |||||||| |||||||| |||||||||| |||| ||||||| ||||| ||||||||| || |
|
|
| T |
6590016 |
tgatgtttacaaaacattgacattcaagatacgtgatctagaatcaggcaaaaatatgttgaaggaaaaactttcccagaatagggttcttcttgtgttt |
6589917 |
T |
|
| Q |
524 |
gatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatc |
623 |
Q |
| |
|
|||||||||| ||||||||| || ||||| ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6589916 |
gatgatgtgaatgaattggagcagctaaaggctttgtgtggtagccgtgattggtttggtccggggagtagaataataatcacaacaagagatatgcatc |
6589817 |
T |
|
| Q |
624 |
ttcttag |
630 |
Q |
| |
|
||||||| |
|
|
| T |
6589816 |
ttcttag |
6589810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 111 - 637
Target Start/End: Original strand, 6672330 - 6672857
Alignment:
| Q |
111 |
gaagtgttaatatcaagaatattgttcaacgtgttagccgttttctagataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagt |
210 |
Q |
| |
|
|||||| | ||||||||||||||||| ||||||| | |||||| |||||||||||||| ||||| ||| |||| |||| |||||||| | |||| | || |
|
|
| T |
6672330 |
gaagtgctgatatcaagaatattgttgaacgtgtcacccgtttcctagataagacagagttattcgttactgaacatccggtgggtgtagaatcttgtgt |
6672429 |
T |
|
| Q |
211 |
ggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaa |
310 |
Q |
| |
|
||||||| | ||| | | | | || | |||||| |||||||||||||| |||||||||||||||||||||| || ||||| |||| |||||||||| |
|
|
| T |
6672430 |
ggaagcttccactaagctacttaacatccagaattcagaagatgttttacttctagggatatggggaatggggggtatgggcaagacaaacattgccaaa |
6672529 |
T |
|
| Q |
311 |
gctatttataataaaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggagacagatactaatcaggtttctctacagc |
410 |
Q |
| |
|
|| ||||| ||| ||||||| | | |||||||||||||||||| ||||| | || |||||||||||||||||| || ||||| ||||||||||||| |
|
|
| T |
6672530 |
gccatttacaatcaaattgggagcaaatttgagggaaggagcttccttctgattataagggaattttgggagacatgtattaatctagtttctctacagc |
6672629 |
T |
|
| Q |
411 |
aacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggt |
510 |
Q |
| |
|
|||| ||||||| |||||| ||||||||||| | ||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||| | ||| |
|
|
| T |
6672630 |
aacaggtactttgtgatgtctacaaaacaacgacattcaagatacgtgacatagaatcaaggaaaaatatactgaaggaaagacttgcccagagcaaggt |
6672729 |
T |
|
| Q |
511 |
acttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcc-tgggagtagaataataatcacaac |
609 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||| | | |||||||||||| ||||||||| |||| ||||| || |
|
|
| T |
6672730 |
acttcttgtgcttgatgatgtgaatgaattggatcagctaaaggctttgtgtggaagctatgaatggtttggtccaagggagtagagtaatcatcaccac |
6672829 |
T |
|
| Q |
610 |
aagggatatgcatcttcttaggtcgtgt |
637 |
Q |
| |
|
||| ||||||||||||||||| |||||| |
|
|
| T |
6672830 |
aagagatatgcatcttcttagatcgtgt |
6672857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 95 - 637
Target Start/End: Original strand, 6648714 - 6649256
Alignment:
| Q |
95 |
atattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttctagataagacagacttatttgttgttgaatatccagtgg |
194 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||| ||| | | | || ||| ||||||| |||||| |||||||||| ||| ||||||||| |
|
|
| T |
6648714 |
atattttataggaatgaaagtgcagatatcaagaatattgttgaacatatcacccatttgctagataggacagagttatttgttgccgaacatccagtgg |
6648813 |
T |
|
| Q |
195 |
gtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttttacttttagggatatggggaatggggggcataggcaa |
294 |
Q |
| |
|
|||| | |||| ||||||||||| ||| | | || | || || ||||| ||||||||| |||| | ||||| |||||||||||||| | || || |
|
|
| T |
6648814 |
gtgtacaacctcgtgtggaagctgcaactaagctactaaacatccaatattcagaagatgtttcacttcttgggatctggggaatggggggaactggaaa |
6648913 |
T |
|
| Q |
295 |
aacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggagacagatactaat |
394 |
Q |
| |
|
||| |||||||||||||| ||||||||| ||||||| | | ||||||||| |||||||| ||||| || || || ||||||||||||||| ||| |||| |
|
|
| T |
6648914 |
aactaccattgccaaagccatttataatcaaattgggaacaaatttgaggggaggagcttccttctgaatataagagaattttgggagacaaatattaat |
6649013 |
T |
|
| Q |
395 |
caggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagac |
494 |
Q |
| |
|
| ||||||||||| |||||| | |||| ||||||||||||||| || | ||||||||| |||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
6649014 |
ctagtttctctacaacaacaacttctttgtgatgtttacaaaactacgacattcaagatacgtgacatagaatcagggaaaaatacattgaaagaaagac |
6649113 |
T |
|
| Q |
495 |
ttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtag |
594 |
Q |
| |
|
|| ||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||| |||||||||||||||| | |||||||||||| |||||||| |
|
|
| T |
6649114 |
tttcccagaatagggtacttattgtgcttgatgatgtgaatgaattggaccaattaaaggctttgtgtggaagccgtgaatggtttggtccggggagtag |
6649213 |
T |
|
| Q |
595 |
aataataatcacaacaagggatatgcatcttcttaggtcgtgt |
637 |
Q |
| |
|
||| || |||||||| || ||||||||||||||||| |||||| |
|
|
| T |
6649214 |
aattatcatcacaacgagagatatgcatcttcttagatcgtgt |
6649256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 619
Target Start/End: Original strand, 6833765 - 6834357
Alignment:
| Q |
24 |
tcttttgataaaaacatatgtttgaggatgcttatatacatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatat |
123 |
Q |
| |
|
||||||||||||| |||||||| | ||| |||||||||||||||||| | | ||||| || |||| ||| ||||||||||||||| ||||| | |||| |
|
|
| T |
6833765 |
tcttttgataaaagcatatgttgaataatgattatatacatacaattgattatgcaccttattattgtttcttattttataggaatgaaagtgctgatat |
6833864 |
T |
|
| Q |
124 |
caagaatattgttcaacgtgttagccgttttctagataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgact |
223 |
Q |
| |
|
||| || |||||| ||||||| | | ||| || |||| |||| | |||||||||| |||| ||||||||||| | | |||||| ||||| ||| || | |
|
|
| T |
6833865 |
caaaaacattgttgaacgtgtcacacatttgcttgataggacaaagttatttgttgctgaacatccagtgggtttagaatctcgtgtggacactgtgatt |
6833964 |
T |
|
| Q |
224 |
gggtttatagatttcaaaaattcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataata |
323 |
Q |
| |
|
| | || | | ||||| ||| |||||||||||| | |||||||||||||||||||| | ||| |||||||||||||||||||| ||||||||| |
|
|
| T |
6833965 |
aagctattaaacataaaaaaatca---gatgttttacttcttgggatatggggaatggggggtacaggtaaaacaaccattgccaaagccatttataatc |
6834061 |
T |
|
| Q |
324 |
aaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttc |
423 |
Q |
| |
|
||||||| | | ||||||||||| |||||| ||| | | ||||||| ||||||||| ||||||||| ||||| || |||||||| ||||||| |
|
|
| T |
6834062 |
aaattgggagcaaatttgagggaatgagcttccttttgggtgtacgggaattctgggagacacatactaatctagtttcactgcagcaacaggtactttg |
6834161 |
T |
|
| Q |
424 |
tgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgctt |
523 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||| |||||||| |
|
|
| T |
6834162 |
tgatgtttacaaaacaacaacatccaagatacatgacatcgaatcagggaaaattatattgaagcaaagacttgctcagaaaagggtgctttttgtgctt |
6834261 |
T |
|
| Q |
524 |
gatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatg |
619 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||||||||||| | || |||||||||| | || ||||||||||| ||||| ||||| |||||| |
|
|
| T |
6834262 |
gatgatgtaactgaattgcaccaactaaatgctttgtgtggaagtcgcgaatggtttggttccggaagtagaataatcatcacgacaagagatatg |
6834357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 240 - 637
Target Start/End: Original strand, 6725734 - 6726131
Alignment:
| Q |
240 |
aaaattcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatt |
339 |
Q |
| |
|
|||| ||| |||||||||||||| ||||||| ||||| |||||||| | || ||||||||| |||||||||| ||||||||| ||||||||| | ||| |
|
|
| T |
6725734 |
aaaaatcagaagatgttttacttctagggatttggggtatggggggtacgggtaaaacaacccttgccaaagccatttataatcaaattggtagcaaatt |
6725833 |
T |
|
| Q |
340 |
tgagggaaggagctttcttctaaacattagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaaca |
439 |
Q |
| |
|
|||||||||||||||| ||||||| || |||||||||||||||||| |||| |||| ||||||||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
6725834 |
tgagggaaggagctttgttctaaatatcagggaattttgggagacaaataccaatctagtttctctacagcaaaaggtactttgtgatgtttacaaaaca |
6725933 |
T |
|
| Q |
440 |
acagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaat |
539 |
Q |
| |
|
| | ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||||||| | ||| |
|
|
| T |
6725934 |
ttaacattcaagatacgtgacatagaatcagggaaaaatatattgaaggaaagactttcccagactagtgtacttcttgtgctagatgatgtgaataaat |
6726033 |
T |
|
| Q |
540 |
tggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttaggtcgtgt |
637 |
Q |
| |
|
||||||| ||||| || |||| |||||||| | |||||||||||| ||||||||||| || |||||||| || |||| |||||||||||| |||||| |
|
|
| T |
6726034 |
tggaccagctaaaggcattgtatggaagccgtgaatggtttggtccggggagtagaattatcatcacaacgagagataagcatcttcttagttcgtgt |
6726131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 84 - 636
Target Start/End: Complemental strand, 6548213 - 6547670
Alignment:
| Q |
84 |
atcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttctagataagacagacttatttgttgttga |
183 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | || |||| | ||||||| | ||||| ||||| ||||||| |||| | |||||||||| || |
|
|
| T |
6548213 |
atcattggttcatattttataggaatgaaagtgctgatgtcaacagtattgttagtcatgttactcgtttgctagataggacacagttatttgttgccga |
6548114 |
T |
|
| Q |
184 |
atatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgttttacttttagggatatggggaatgggg |
283 |
Q |
| |
|
| |||||||||| || | |||||| ||| ||||||| || | | || | || |||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6548113 |
acatccagtgggagtagaatctcgtgtgcaagctgcaaccaagctattaaagatccaaaagtcagaagatgttttacttttagggatatggggaatggg- |
6548015 |
T |
|
| Q |
284 |
ggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggaga |
383 |
Q |
| |
|
|||||||||||| |||||| | ||||||||| ||||||||| | ||||| |||| |||||| ||||| || || |||||||||||||||| |
|
|
| T |
6548014 |
--------caaaacaaccatagccaaatccatttataatgaaattggtagcaagtttgacggaaagagcttccttctgaatataagggaattttgggaga |
6547923 |
T |
|
| Q |
384 |
cagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatatt |
483 |
Q |
| |
|
||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||| |||||||||||||||| ||| |
|
|
| T |
6547922 |
caggtactaatcaagtttcactacagcaacaagtactttgtgatgtttacaaaacaacttcattcaagatacgtgacattgaatcagggaaaaatacatt |
6547823 |
T |
|
| Q |
484 |
gaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggt |
583 |
Q |
| |
|
||||||||||| || | || || || ||| | |||||||||||||| | |||| |||||||| |||| || ||||||||||||| | |||||||||| |
|
|
| T |
6547822 |
aaaggaaagactctccgataatagagtgcttttagtgcttgatgatgtaaatgaactggaccaaataaaggcattgtgtggaagccgcaaatggtttggt |
6547723 |
T |
|
| Q |
584 |
cctgggagtagaataataatcacaacaagggatatgcatcttcttaggtcgtg |
636 |
Q |
| |
|
|| ||||| |||||||| ||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
6547722 |
cccgggagcagaataatcatcacaacaagagatatgcgtcttcttagatcgtg |
6547670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 266 - 630
Target Start/End: Original strand, 6756295 - 6756659
Alignment:
| Q |
266 |
gggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttctaaaca |
365 |
Q |
| |
|
|||||||||||||||||||| || || |||||||||||||||||||| ||||||||| ||||||| | | |||||||||||||||||| ||||| || | |
|
|
| T |
6756295 |
gggatatggggaatggggggtatgggtaaaacaaccattgccaaagccatttataatgaaattggaagaaaatttgagggaaggagcttccttctgaata |
6756394 |
T |
|
| Q |
366 |
ttagggaattttgggagacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcga |
465 |
Q |
| |
|
| || || ||||||||||||||||||||||| ||||| ||||| ||||| ||||| | |||| |||| ||||||| | ||||||||| |||||| || |
|
|
| T |
6756395 |
taagagagttttgggagacagatactaatcaagtttcactacaacaacaggtactctgcgatgcttacgaaacaacgacattcaagatacgtgacataga |
6756494 |
T |
|
| Q |
466 |
atcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtgga |
565 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| | | |||||||||| |
|
|
| T |
6756495 |
atcagggaaaaatatattgaagcaaagactggcccagaatagggtacttctagtgcttgatgatgtcagtgaatttcaccaactacaggttttgtgtgga |
6756594 |
T |
|
| Q |
566 |
agccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttag |
630 |
Q |
| |
|
|||| | |||||||||||| || ||||||||||| ||||||||||| |||| | |||||||||| |
|
|
| T |
6756595 |
agccgtgaatggtttggtccgggtagtagaataatcatcacaacaagagataggaatcttcttag |
6756659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 303 - 514
Target Start/End: Original strand, 8412730 - 8412941
Alignment:
| Q |
303 |
ttgccaaagctatttataataaaattggtatgagatttgagggaaggagctttcttctaaacattagggaattttgggagacagatactaatcaggtttc |
402 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| | ||||||||||| | |||| ||||||| || |||||||||||||||| | ||||||||| ||||| |
|
|
| T |
8412730 |
ttgccaaagccatttataatcaaattggtagaaaatttgagggaaagtgcttcgttctaaatataagggaattttgggagaaaaatactaatctagtttc |
8412829 |
T |
|
| Q |
403 |
tctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccag |
502 |
Q |
| |
|
||||||||||| ||||||| |||| ||||||||||| | ||||||||||||||| | ||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
8412830 |
tctacagcaactggtactttgtgatttttacaaaacattgacatacaagatacatgacatagtatcagggaaaagtatactgaaggaaagacttgcccag |
8412929 |
T |
|
| Q |
503 |
aaaagggtactt |
514 |
Q |
| |
|
| ||||||||| |
|
|
| T |
8412930 |
actagggtactt |
8412941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 503 - 622
Target Start/End: Original strand, 4343031 - 4343150
Alignment:
| Q |
503 |
aaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataa |
602 |
Q |
| |
|
||||| || |||||||| ||||| ||||||| | ||||||| ||||||||||||||||||||||| | ||||||||| ||| |||||||||||||| | |
|
|
| T |
4343031 |
aaaagagttcttcttgtacttgacgatgtgaataaattggatcaactaaatgctttgtgtggaagtcgtagatggtttgctccagggagtagaataatca |
4343130 |
T |
|
| Q |
603 |
tcacaacaagggatatgcat |
622 |
Q |
| |
|
||||||| ||||||| |||| |
|
|
| T |
4343131 |
tcacaaccagggataagcat |
4343150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 464 - 622
Target Start/End: Complemental strand, 4126389 - 4126231
Alignment:
| Q |
464 |
gaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtg |
563 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||| || ||||| || |||||||| ||||| ||||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
4126389 |
gaatcagggaaatctatattaaaggaacgactttgtcataaaagagttcttcttgtacttgacgatgtgaataaattggaccaactcaatgctttgtgtg |
4126290 |
T |
|
| Q |
564 |
gaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcat |
622 |
Q |
| |
|
|||| |||||||| ||| |||||||||||||| ||||| || ||||||| |||| |
|
|
| T |
4126289 |
gaagttgtaaatggtttgctccagggagtagaataatcatcacgaccagggataagcat |
4126231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 619
Target Start/End: Original strand, 4351330 - 4351434
Alignment:
| Q |
515 |
cttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaaggg |
614 |
Q |
| |
|
||||| ||||| ||||||| | ||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||| |||||||| |||| |
|
|
| T |
4351330 |
cttgtacttgacgatgtgaataaattggaccaacttaatactttgtgtggaagttgtaaatggtttgctcctgggagtagaataatcatcacaaccaggg |
4351429 |
T |
|
| Q |
615 |
atatg |
619 |
Q |
| |
|
||||| |
|
|
| T |
4351430 |
atatg |
4351434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 622
Target Start/End: Original strand, 4358460 - 4358618
Alignment:
| Q |
464 |
gaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtg |
563 |
Q |
| |
|
|||||||| ||| |||||| ||||||||||| || ||||| |||||| |||| ||||| ||||| | | ||||||||||||||||||||||||||| |
|
|
| T |
4358460 |
gaatcaggaaaatctatattaaaggaaagactgtgtcataaaagagtacttattgtacttgacgatgtcaataaattggaccaactaaatgctttgtgtg |
4358559 |
T |
|
| Q |
564 |
gaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcat |
622 |
Q |
| |
|
|||| |||||||| ||| || |||||||| || |||||||| ||||||| |||| |
|
|
| T |
4358560 |
gaagttgtaaatggtttgctccaggaagtagaattatcatcacaactagggataagcat |
4358618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 25567834 - 25567919
Alignment:
| Q |
245 |
tcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
|||||||||||| ||||| ||||||| ||||| ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
25567834 |
tcaaaagatgttctacttctagggatgtggggtatgggagggattggcaaaaccaccattgcaaaagccatttacaataaaattgg |
25567919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 549 - 637
Target Start/End: Original strand, 4925774 - 4925862
Alignment:
| Q |
549 |
taaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttaggtcgtgt |
637 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||| |||| ||||||||| | |||||| |
|
|
| T |
4925774 |
taaaggctttgtgtggaagccacgaccggtttggtccgggtagtagaataatcatcacaacaagaaatattcatcttcttggatcgtgt |
4925862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 622
Target Start/End: Complemental strand, 4323015 - 4322896
Alignment:
| Q |
503 |
aaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataa |
602 |
Q |
| |
|
||||| ||||||||||| ||||| ||||||| | || ||||||| |||||||||||||||||||| |||||||| ||| || ||||||||||| | |
|
|
| T |
4323015 |
aaaagagtacttcttgtacttgacgatgtgaataaactggaccagctaaatgctttgtgtggaagttgtaaatggtttgctccaggtagtagaataatca |
4322916 |
T |
|
| Q |
603 |
tcacaacaagggatatgcat |
622 |
Q |
| |
|
||||||| || |||| |||| |
|
|
| T |
4322915 |
tcacaactagagataagcat |
4322896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 628
Target Start/End: Complemental strand, 4925765 - 4925690
Alignment:
| Q |
554 |
gctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaac-aagggatatgcatcttctt |
628 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| || ||||||||||| |||||||| ||| ||||||||| ||||| |
|
|
| T |
4925765 |
gctttgtgtggaagccgcggctggtttggtccaggtagtagaataatcatcacaacaaagagatatgcatattctt |
4925690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 448 - 622
Target Start/End: Original strand, 4333586 - 4333760
Alignment:
| Q |
448 |
caagatacatgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaa |
547 |
Q |
| |
|
||||||||| |||| ||| |||| ||| ||||||| ||||| ||||| || ||||| || ||| |||| ||||| ||||| | | ||||||||||| |
|
|
| T |
4333586 |
caagatacaaaacatagaagcaggaaaatatatattaaaggacagactatgtcataaaagagttcttattgtacttgacgatgttaataaattggaccaa |
4333685 |
T |
|
| Q |
548 |
ctaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcat |
622 |
Q |
| |
|
|||||| | |||||||||| | |||||||| |||||||||||||||||| || ||||| ||||||| |||| |
|
|
| T |
4333686 |
ctaaatattctgtgtggaagtcgtaaatggtttgctcctgggagtagaataatcattacaactagggataagcat |
4333760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 574 - 629
Target Start/End: Original strand, 8412958 - 8413013
Alignment:
| Q |
574 |
atggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttctta |
629 |
Q |
| |
|
|||||||||||| || ||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
8412958 |
atggtttggtccgggaagtagaataatcatcacaacaagagagatgcatcttctta |
8413013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 331
Target Start/End: Original strand, 4342773 - 4342859
Alignment:
| Q |
245 |
tcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggt |
331 |
Q |
| |
|
||||| |||||| |||| ||||||| ||||| ||||| || || || ||||| |||||||| ||||| ||||| |||||||||||| |
|
|
| T |
4342773 |
tcaaatgatgttctactactagggatgtgggggatgggtggaatggggaaaaccaccattgcaaaagccatttacaataaaattggt |
4342859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 617
Target Start/End: Original strand, 6811808 - 6811922
Alignment:
| Q |
503 |
aaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataa |
602 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | | ||||||| || ||||| |||||||| ||||| | | ||||||||| | || || | |||||| | |
|
|
| T |
6811808 |
aaaagggtacttcttgtacttgacgatgttaataaattggagcagctaaacgctttgtgcggaagtcgtgaatggtttggcaccggtagcaaaataatca |
6811907 |
T |
|
| Q |
603 |
tcacaacaagggata |
617 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
6811908 |
tcacaacaagagata |
6811922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 4351062 - 4351147
Alignment:
| Q |
245 |
tcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
|||||||||||| |||| ||||||| ||||| ||||| || || |||||| | ||| |||| ||||| ||||| ||||||||||| |
|
|
| T |
4351062 |
tcaaaagatgttctactaatagggatgtgggggatgggtggaatcggcaaatccaccgttgcaaaagccatttacaataaaattgg |
4351147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 7875948 - 7875868
Alignment:
| Q |
537 |
aattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggata |
617 |
Q |
| |
|
|||||||||| | |||||||||||||| || | | |||||||||| ||| ||||||||||| ||||||||||| |||| |
|
|
| T |
7875948 |
aattggaccagttgaatgctttgtgtggtagtcttgagtggtttggtcatggtagtagaataattatcacaacaagtgata |
7875868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 220; Significance: 1e-120; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 57 - 630
Target Start/End: Complemental strand, 12239 - 11665
Alignment:
| Q |
57 |
atatacatacaattgactgtacacctaatcattggttcatattttataggaatggaagtgttaatatcaagaatattgttcaacgtgttagccgttttct |
156 |
Q |
| |
|
|||||||||||||||| || ||||| |||||| ||||||||||||||||||| ||||| | ||||||||||||||||| ||| ||| | | |||| || |
|
|
| T |
12239 |
atatacatacaattgatagtgcaccttatcattatttcatattttataggaatgaaagtgctgatatcaagaatattgttgaacatgtcaccggtttgct |
12140 |
T |
|
| Q |
157 |
agataagacagacttatttgttgttgaatatccagtgggtgttggatctcgagtggaagctgcgactgggtttatagatttcaaaaattcaaaagatgtt |
256 |
Q |
| |
|
| || |||||| |||||||||| |||| ||||||||||| | | |||||| ||||||| ||||||| | | || | ||||||| ||| ||||||| |
|
|
| T |
12139 |
tggtaggacagagttatttgttgctgaacatccagtgggtttagaatctcgtgtggaagttgcgactaagctgctaaacatcaaaaactcagaagatgta |
12040 |
T |
|
| Q |
257 |
ttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggtatgagatttgagggaaggagctttc |
356 |
Q |
| |
|
||| || |||||||||||||||||||||| || || ||||||||| |||| ||||| ||| ||||| ||||||| | | |||||||||||||||||| | |
|
|
| T |
12039 |
ttaattctagggatatggggaatggggggtatgggaaaaacaacccttgctaaagccattcataatcaaattgggagcaaatttgagggaaggagcttcc |
11940 |
T |
|
| Q |
357 |
ttctaaacattagggaattttggg-agacagatactaatcaggtttctctacagcaacaagtactttctgatgtttacaaaacaacaga-actcaagata |
454 |
Q |
| |
|
|| | |||||||||||| |||||| | |||||||||||||| |||| | |||||||||| ||||| ||||||||||||| || | || | |||| ||| |
|
|
| T |
11939 |
ttttgaacattagggaagtttggggacacagatactaatcaagtttgtgtacagcaacagatacttcatgatgtttacaaagca-ctgacattcaaaata |
11841 |
T |
|
| Q |
455 |
catgacatcgaatcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatg |
554 |
Q |
| |
|
| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| | |
|
|
| T |
11840 |
cgtgatatagaatcagggaaaaatatattgaaggaaagacttgcccagaaaaggatacttcttgtgcttgatgatgtgaatgaattggaccagctaaagg |
11741 |
T |
|
| Q |
555 |
ctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggatatgcatcttcttag |
630 |
Q |
| |
|
| |||||||| |||| | |||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
11740 |
cattgtgtggtagccgcaaatggtttggtccggggagtagaataataatcacaacaagaaatattcatcttcttag |
11665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 612
Target Start/End: Complemental strand, 34735512 - 34735298
Alignment:
| Q |
398 |
gtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgaca-tcgaatcagggaaaaatatattgaaggaaagactt |
496 |
Q |
| |
|
||||||||||| |||||| | ||||||||| | |||||||||||| || | |||||| || ||| | |||||||| |||| |||||| ||||||||||| |
|
|
| T |
34735512 |
gtttctctacaacaacaactcctttctgatatctacaaaacaacaaaaataaagatagat-acagttgaatcaggaaaaatgatattgcaggaaagactt |
34735414 |
T |
|
| Q |
497 |
gcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaa |
596 |
Q |
| |
|
|| || ||| || |||||||||| || ||||||| | || |||||||| | ||||||||||| ||||| ||||||||||||||| || ||||||| |
|
|
| T |
34735413 |
cgtcataagaggatatttcttgtgctggacgatgtgaataaactggaccaattgaatgctttgtgcggaagtcacggatggtttggtgaaggaagtagaa |
34735314 |
T |
|
| Q |
597 |
taataatcacaacaag |
612 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
34735313 |
taatcatcacaacaag |
34735298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 612
Target Start/End: Complemental strand, 34730913 - 34730699
Alignment:
| Q |
398 |
gtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgaca-tcgaatcagggaaaaatatattgaaggaaagactt |
496 |
Q |
| |
|
||||||||||| |||| | | ||||||||| | |||||||||||| || | |||||| | ||| | |||||||| |||| |||||| ||||||||||| |
|
|
| T |
34730913 |
gtttctctacaacaacgactcctttctgatatctacaaaacaacaaaaataaagatagaa-acagttgaatcaggaaaaatgatattgcaggaaagactt |
34730815 |
T |
|
| Q |
497 |
gcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaa |
596 |
Q |
| |
|
|| || ||| || |||||||||| || ||||||| | || |||||||| | ||||||||||| ||||| ||||||||||||||| || ||||||| |
|
|
| T |
34730814 |
tgtcataagaggatatttcttgtgctggacgatgtgaataaactggaccaattgaatgctttgtgcggaagtcacggatggtttggtgaaggaagtagaa |
34730715 |
T |
|
| Q |
597 |
taataatcacaacaag |
612 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
34730714 |
taatcatcacaacaag |
34730699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 612
Target Start/End: Complemental strand, 34727755 - 34727541
Alignment:
| Q |
398 |
gtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgaca-tcgaatcagggaaaaatatattgaaggaaagactt |
496 |
Q |
| |
|
||||||||||| |||| | | ||||||||| | |||||||||||| || | |||||| | ||| | |||||||| |||| |||||| ||||||||||| |
|
|
| T |
34727755 |
gtttctctacaacaacgactcctttctgatatctacaaaacaacaaaaataaagatagaa-acagttgaatcaggaaaaatgatattgcaggaaagactt |
34727657 |
T |
|
| Q |
497 |
gcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaa |
596 |
Q |
| |
|
|| || ||| || ||||||||||||| ||||||| | || |||||||| | ||||||||||||||||| || | |||||||||| || ||||||| |
|
|
| T |
34727656 |
cgtcataagaggatatttcttgtgcttgacgatgtgaataaagtggaccaattgaatgctttgtgtggaagtcatgaatggtttggtgaaggaagtagaa |
34727557 |
T |
|
| Q |
597 |
taataatcacaacaag |
612 |
Q |
| |
|
|||| ||||| ||||| |
|
|
| T |
34727556 |
taatgatcactacaag |
34727541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 612
Target Start/End: Original strand, 18928968 - 18929185
Alignment:
| Q |
395 |
caggtttctctacagcaacaagtactttctgatgtttacaaaacaacagaactcaagatacatgacatcgaatcagggaaaaat-atattgaaggaaaga |
493 |
Q |
| |
|
|||||||||||||| |||| | | || |||||| | ||||||||||||||| | ||||| | | | ||||| ||||||||| ||||||||||||||| |
|
|
| T |
18928968 |
caggtttctctacaacaacgactcctatctgatatctacaaaacaacagaaataaagattcgtactcttgaatc-gggaaaaatgatattgaaggaaaga |
18929066 |
T |
|
| Q |
494 |
cttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagta |
593 |
Q |
| |
|
||| |||||| | || |||||||| | || ||||||| | || ||||||| | ||||||||||| ||||| |||| |||||||||| || |||| |
|
|
| T |
18929067 |
cttcagaagaaaaagatatttcttgtgttggacgatgtgaataaagaggaccaattgaatgctttgtgcggaagtcacgaatggtttggtgaaggaagta |
18929166 |
T |
|
| Q |
594 |
gaataataatcacaacaag |
612 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
18929167 |
gaataatcatcacaacaag |
18929185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 622
Target Start/End: Complemental strand, 36215805 - 36215686
Alignment:
| Q |
503 |
aaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataa |
602 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||| |||||| ||| | ||||||||||||||||| | |||||||||| |||||||||||||| | |
|
|
| T |
36215805 |
aaaagagtacttcttgtacttgatgacgtgagtacattggatcaatttaatgctttgtgtggaagtcgtcaatggtttggtgtggggagtagaataatca |
36215706 |
T |
|
| Q |
603 |
tcacaacaagggatatgcat |
622 |
Q |
| |
|
||||||| || |||| |||| |
|
|
| T |
36215705 |
tcacaactagagataggcat |
36215686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 617
Target Start/End: Original strand, 5094148 - 5094244
Alignment:
| Q |
521 |
cttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggata |
617 |
Q |
| |
|
||||||||||| | | |||||||||||||||||||||||| ||||| || |||||||||||| |||||||||||||| || || |||||||||| |
|
|
| T |
5094148 |
cttgatgatgttaatacattggaccaactaaatgctttgtgcggaagtcataaatggtttggtccggggagtagaataatcattaccacaagggata |
5094244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 617
Target Start/End: Complemental strand, 5159379 - 5159300
Alignment:
| Q |
538 |
attggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggata |
617 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||| || || |||||||||| |
|
|
| T |
5159379 |
attggaccaactaaatgctttgtgcggaagtcataaatggtttggttctgggagtagaataatcattaccacaagggata |
5159300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 617
Target Start/End: Original strand, 5423877 - 5423956
Alignment:
| Q |
538 |
attggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggata |
617 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||| ||||||||||| |||| |
|
|
| T |
5423877 |
attggaccaactgaatgctttgtgtggaagtcataaatggtttggttcggggagtagaataattatcacaacaagagata |
5423956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 5423603 - 5423670
Alignment:
| Q |
264 |
tagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattggt |
331 |
Q |
| |
|
||||||| ||||| |||||||| | || |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
5423603 |
tagggatgtggggtatggggggagttggtaaaacaaccattgccaaagctatttacaataaaattggt |
5423670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 622
Target Start/End: Complemental strand, 5075631 - 5075525
Alignment:
| Q |
516 |
ttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaaggga |
615 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||| | ||||||||||| |||| | |||| || || | |||||||||||||| |||||||| ||||| |
|
|
| T |
5075631 |
ttgtacttgatgatgtgagtgaattggagcaattgaatgctttgtgcggaaatcgtaaatggcttagttcagggagtagaataattatcacaaccaggga |
5075532 |
T |
|
| Q |
616 |
tatgcat |
622 |
Q |
| |
|
||||||| |
|
|
| T |
5075531 |
tatgcat |
5075525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 5134076 - 5133991
Alignment:
| Q |
245 |
tcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||| |||||| ||||| ||||||| ||||| ||||| ||| | || |||||||||||||| ||||| ||||| ||||||||||| |
|
|
| T |
5134076 |
tcaaatgatgttatacttctagggatgtggggtatgggaggcgttggtaaaacaaccattgcgaaagccatttacaataaaattgg |
5133991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 266 - 330
Target Start/End: Complemental strand, 5159651 - 5159587
Alignment:
| Q |
266 |
gggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||| ||||| |||||||| || ||||||||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
5159651 |
gggatgtggggtatgggggggattggcaaaacaaccattgcaaaagctatctataatgaaattgg |
5159587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 567
Target Start/End: Complemental strand, 5183901 - 5183801
Alignment:
| Q |
467 |
tcagggaaaaatatattgaaggaaagacttgcccagaaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaa |
566 |
Q |
| |
|
|||||||||| |||| | ||||| ||||| ||| ||||| |||||||| || ||||||||||||| | ||| |||||||| |||||||||||||||| |
|
|
| T |
5183901 |
tcagggaaaagtatactaaaggatagactcttccataaaagagtacttctggtacttgatgatgtgaatacatttgaccaactgaatgctttgtgtggaa |
5183802 |
T |
|
| Q |
567 |
g |
567 |
Q |
| |
|
| |
|
|
| T |
5183801 |
g |
5183801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 5368312 - 5368376
Alignment:
| Q |
266 |
gggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||| ||||| |||||||| | || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5368312 |
gggatgtggggtatggggggagttggtaaaacaaccattgccaaagctatttacaataaaattgg |
5368376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 617
Target Start/End: Complemental strand, 5068952 - 5068873
Alignment:
| Q |
538 |
attggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaacaagggata |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||| | || ||||||||||| ||||| |||||||||| |
|
|
| T |
5068952 |
attggaccaactaaatgctttgtgtggaagtcgtaagtggtttggttcgggaagtagaataatcatcaccacaagggata |
5068873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 622
Target Start/End: Complemental strand, 5148872 - 5148753
Alignment:
| Q |
503 |
aaaagggtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataa |
602 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| ||||| ||| | | ||||||||||||||| | ||||||||| | || ||||||||||| | |
|
|
| T |
5148872 |
aaaagagtacttcttgtacttgatgatgtgagtacgttggatcaattgactgctttgtgtggaagtcgtcaatggtttggctcgggaagtagaataatta |
5148773 |
T |
|
| Q |
603 |
tcacaacaagggatatgcat |
622 |
Q |
| |
|
||||||| || ||||||||| |
|
|
| T |
5148772 |
tcacaactagagatatgcat |
5148753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 5105024 - 5104958
Alignment:
| Q |
264 |
tagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||||| ||||| ||||| || | || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5105024 |
tagggatgtggggtatgggaggagttggtaaaacaaccattgccaaagctatttacaataaaattgg |
5104958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 5069242 - 5069157
Alignment:
| Q |
245 |
tcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||| |||||| | ||| ||||||| ||||| ||||| || | || ||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
5069242 |
tcaaatgatgttctccttctagggatgtggggtatgggaggagttggtaaaacgaccattgccaaagctatttacaataaaattgg |
5069157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 5356787 - 5356702
Alignment:
| Q |
245 |
tcaaaagatgttttacttttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||| |||||||| ||| ||||||| ||||| ||||| || | |||||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
5356787 |
tcaaatgatgttttccttctagggatgtggggtatgggaggagttggcaaaacaaccatcggaaaagctatttacaataaaattgg |
5356702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 622
Target Start/End: Original strand, 5445178 - 5445291
Alignment:
| Q |
509 |
gtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaa |
608 |
Q |
| |
|
|||||| |||| ||||||||||||| | ||| |||||||| ||| |||| |||| ||| | | ||||||||| | ||||||| |||||||||||||| |
|
|
| T |
5445178 |
gtacttgttgtacttgatgatgtgaatacattagaccaacttaatactttctgtgcaagtcgtgaatggtttggctcagggagtataataataatcacaa |
5445277 |
T |
|
| Q |
609 |
caagggatatgcat |
622 |
Q |
| |
|
| || ||||||||| |
|
|
| T |
5445278 |
ccagagatatgcat |
5445291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 330
Target Start/End: Original strand, 5093893 - 5093957
Alignment:
| Q |
266 |
gggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||| ||||| |||||||| || || |||||||||||||| |||||||| |||||| ||||||| |
|
|
| T |
5093893 |
gggatgtggggtatgggggggattggtaaaacaaccattgcaaaagctatctataatgaaattgg |
5093957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 5262296 - 5262229
Alignment:
| Q |
263 |
ttagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
|||||||| ||||| |||||||| || ||||||||||||||| | ||||| ||||| ||||| ||||| |
|
|
| T |
5262296 |
ttagggatgtggggtatggggggaattggcaaaacaaccattacgaaagccatttacaataagattgg |
5262229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 5348261 - 5348327
Alignment:
| Q |
264 |
tagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||||| ||||| ||||| || | || ||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
5348261 |
tagggatgtggggtatgggaggagttggtaaaacgaccattgccaaagctatttacaataaaattgg |
5348327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 5692263 - 5692197
Alignment:
| Q |
264 |
tagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||||| ||||| ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
5692263 |
tagggatgtggggcatgggaggaattggcaaaaccaccattgcaaaagccatttacaataaaattgg |
5692197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 567
Target Start/End: Original strand, 5368584 - 5368613
Alignment:
| Q |
538 |
attggaccaactaaatgctttgtgtggaag |
567 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
5368584 |
attggaccaactaaatgctttgtgtggaag |
5368613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 574 - 622
Target Start/End: Complemental strand, 5104714 - 5104666
Alignment:
| Q |
574 |
atggtttggtcctgggagtagaataataatcacaacaagggatatgcat |
622 |
Q |
| |
|
|||||||||| | |||||||||||||| || ||||||||||||| |||| |
|
|
| T |
5104714 |
atggtttggttcggggagtagaataatcattacaacaagggataggcat |
5104666 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 509 - 609
Target Start/End: Complemental strand, 10575 - 10475
Alignment:
| Q |
509 |
gtacttcttgtgcttgatgatgtgagtgaattggaccaactaaatgctttgtgtggaagccacggatggtttggtcctgggagtagaataataatcacaa |
608 |
Q |
| |
|
||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| | | |||||||||| | |||| ||||||||| || |||| |
|
|
| T |
10575 |
gtacttcttgttcttgatgatgtggatagtttggaccaactaaatgctttgtgtggaagtcgtgaatggtttggttcagggactagaataatcattacaa |
10476 |
T |
|
| Q |
609 |
c |
609 |
Q |
| |
|
| |
|
|
| T |
10475 |
c |
10475 |
T |
|
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Target: chr2 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 22586467 - 22586401
Alignment:
| Q |
264 |
tagggatatggggaatggggggcataggcaaaacaaccattgccaaagctatttataataaaattgg |
330 |
Q |
| |
|
||||||| ||||| |||||||| | ||||||||||||||||| |||||| |||| ||||| ||||| |
|
|
| T |
22586467 |
tagggatgtggggtatggggggatttggcaaaacaaccattgcaaaagctgtttacaataagattgg |
22586401 |
T |
|
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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 20836492 - 20836541
Alignment:
| Q |
264 |
tagggatatggggaatggggggcataggcaaaacaaccattgccaaagct |
313 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| ||||||||| |
|
|
| T |
20836492 |
tagggatatggggaatgggtggattaggcaaaacaaccacggccaaagct |
20836541 |
T |
|
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