View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16108_low_5 (Length: 306)
Name: NF16108_low_5
Description: NF16108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16108_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7736540 - 7736772
Alignment:
| Q |
1 |
tgatacctgtagctgctaatgatgttgctttctccactcatgcagttataatcaatctgattgtaatatctcaatttgcaatctatggagtaagtacata |
100 |
Q |
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| T |
7736540 |
tgatacctgtggctgctaatgatgttgctttctccactcatgcagttataatcaatctgattgtaatatctcaatttgcaatctatggagtaagtacata |
7736639 |
T |
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| Q |
101 |
taatcaacttgttgagttcttgataatttaaagatggtatttgttttcatgtttgagtacactttgcttcggaccaaacgtctgttttgaggcgcgctca |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
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| T |
7736640 |
taatcaacttgttgagttcttgataattcaaagatggtatttgttttcatgtttgagtacactttgcttcagaccaaacgtctgttttgaggcgcgttca |
7736739 |
T |
|
| Q |
201 |
aacatgaaagcaaaaacattgagaatctgtttg |
233 |
Q |
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|||||||||||||||||| |||||||||||||| |
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| T |
7736740 |
aacatgaaagcaaaaacactgagaatctgtttg |
7736772 |
T |
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