View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1610R-Insertion-14 (Length: 720)

Name: NF1610R-Insertion-14
Description: NF1610R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1610R-Insertion-14
NF1610R-Insertion-14
[»] chr6 (41 HSPs)
chr6 (101-684)||(30934863-30935454)
chr6 (428-681)||(30994106-30994360)
chr6 (166-374)||(30993874-30994081)
chr6 (415-575)||(30965348-30965507)
chr6 (29-99)||(13057589-13057659)
chr6 (29-81)||(30728687-30728739)
chr6 (29-100)||(15540989-15541060)
chr6 (29-100)||(24338294-24338365)
chr6 (29-87)||(3629723-3629781)
chr6 (29-81)||(26065386-26065437)
chr6 (29-81)||(26085355-26085406)
chr6 (29-100)||(2628726-2628795)
chr6 (29-100)||(8717194-8717264)
chr6 (40-99)||(9020339-9020398)
chr6 (29-100)||(15367428-15367499)
chr6 (29-84)||(19704419-19704473)
chr6 (29-100)||(26932402-26932472)
chr6 (29-87)||(15346743-15346801)
chr6 (29-99)||(18322497-18322566)
chr6 (29-87)||(29754561-29754618)
chr6 (29-102)||(11982869-11982941)
chr6 (620-681)||(30965503-30965564)
chr6 (31-87)||(1069575-1069631)
chr6 (29-81)||(4816089-4816140)
chr6 (29-81)||(5273074-5273125)
chr6 (205-257)||(25048610-25048662)
chr6 (29-101)||(30034445-30034514)
chr6 (29-81)||(32280393-32280445)
chr6 (29-100)||(3394767-3394838)
chr6 (40-99)||(13040173-13040232)
chr6 (29-100)||(26068234-26068304)
chr6 (29-87)||(12195366-12195423)
chr6 (29-87)||(14466721-14466779)
chr6 (29-79)||(14507037-14507086)
chr6 (29-87)||(22491009-22491067)
chr6 (29-87)||(26065973-26066030)
chr6 (237-374)||(30965201-30965336)
chr6 (29-81)||(33309261-33309312)
chr6 (29-81)||(33311530-33311581)
chr6 (42-77)||(10584355-10584390)
chr6 (31-102)||(28241160-28241229)
[»] chr3 (61 HSPs)
chr3 (176-264)||(41147650-41147738)
chr3 (29-99)||(53915338-53915408)
chr3 (29-99)||(36012173-36012243)
chr3 (29-99)||(1313751-1313822)
chr3 (29-100)||(3315030-3315101)
chr3 (29-100)||(43423307-43423378)
chr3 (29-100)||(53917505-53917576)
chr3 (30-100)||(18099009-18099079)
chr3 (29-87)||(45883287-45883345)
chr3 (29-81)||(51674627-51674679)
chr3 (29-100)||(1321828-1321898)
chr3 (29-100)||(42990648-42990718)
chr3 (29-100)||(43226426-43226496)
chr3 (29-100)||(43421259-43421330)
chr3 (29-99)||(18096740-18096810)
chr3 (29-87)||(24980056-24980114)
chr3 (29-81)||(5522483-5522534)
chr3 (29-81)||(27635516-27635568)
chr3 (29-81)||(32219432-32219484)
chr3 (29-100)||(6065632-6065702)
chr3 (29-100)||(11168451-11168520)
chr3 (29-100)||(28101847-28101918)
chr3 (29-87)||(747108-747165)
chr3 (29-99)||(10084229-10084297)
chr3 (29-99)||(10191152-10191220)
chr3 (29-99)||(41849402-41849470)
chr3 (29-87)||(43228636-43228693)
chr3 (29-82)||(38890390-38890442)
chr3 (29-70)||(51943717-51943758)
chr3 (29-81)||(456257-456308)
chr3 (29-81)||(458634-458685)
chr3 (29-81)||(5192000-5192051)
chr3 (29-81)||(10955884-10955935)
chr3 (29-81)||(53893911-53893962)
chr3 (30-77)||(1626548-1626595)
chr3 (29-100)||(10621365-10621435)
chr3 (29-100)||(25533774-25533843)
chr3 (29-99)||(4103736-4103804)
chr3 (29-99)||(9604447-9604516)
chr3 (29-87)||(12267831-12267889)
chr3 (29-87)||(17795599-17795657)
chr3 (29-87)||(19104039-19104097)
chr3 (29-99)||(22114143-22114211)
chr3 (35-87)||(3307111-3307164)
chr3 (32-77)||(15781226-15781271)
chr3 (44-81)||(28181362-28181399)
chr3 (29-81)||(880314-880366)
chr3 (29-81)||(5886547-5886598)
chr3 (29-81)||(5900020-5900071)
chr3 (29-81)||(10958180-10958231)
chr3 (29-81)||(25389256-25389307)
chr3 (29-100)||(6063282-6063352)
chr3 (29-76)||(7606465-7606511)
chr3 (29-100)||(28412869-28412939)
chr3 (29-87)||(18163010-18163068)
chr3 (29-87)||(28761299-28761357)
chr3 (41-87)||(38210732-38210777)
chr3 (55-97)||(47701522-47701564)
chr3 (29-87)||(50494348-50494405)
chr3 (29-102)||(31151685-31151757)
chr3 (40-81)||(42992741-42992782)
[»] chr4 (65 HSPs)
chr4 (29-99)||(33415334-33415404)
chr4 (29-100)||(14789272-14789343)
chr4 (29-99)||(14787274-14787344)
chr4 (29-99)||(22800705-22800775)
chr4 (29-99)||(37312924-37312994)
chr4 (29-99)||(38928024-38928094)
chr4 (29-81)||(3824467-3824519)
chr4 (29-101)||(49088974-49089046)
chr4 (29-100)||(5101334-5101405)
chr4 (29-100)||(22802576-22802647)
chr4 (29-100)||(36921337-36921408)
chr4 (29-100)||(53405556-53405627)
chr4 (29-99)||(37089212-37089282)
chr4 (29-96)||(36919432-36919499)
chr4 (29-87)||(6765265-6765323)
chr4 (29-99)||(26085818-26085886)
chr4 (29-83)||(38270010-38270064)
chr4 (29-102)||(24348624-24348695)
chr4 (29-101)||(3937124-3937195)
chr4 (29-81)||(18409211-18409263)
chr4 (29-101)||(22780210-22780281)
chr4 (29-101)||(24446500-24446572)
chr4 (29-100)||(619297-619368)
chr4 (29-100)||(16453726-16453797)
chr4 (29-100)||(47868825-47868895)
chr4 (29-87)||(2891710-2891768)
chr4 (30-100)||(8631259-8631327)
chr4 (29-87)||(14633741-14633798)
chr4 (29-87)||(16455644-16455702)
chr4 (29-99)||(19096300-19096370)
chr4 (29-99)||(56030875-56030945)
chr4 (29-86)||(12395703-12395760)
chr4 (29-86)||(12400665-12400722)
chr4 (29-81)||(2484732-2484783)
chr4 (29-81)||(6133255-6133307)
chr4 (29-101)||(9173985-9174055)
chr4 (29-81)||(9176332-9176383)
chr4 (32-100)||(11437789-11437856)
chr4 (29-81)||(18847575-18847626)
chr4 (29-81)||(22046545-22046596)
chr4 (29-100)||(40091258-40091330)
chr4 (29-77)||(47563177-47563225)
chr4 (29-80)||(22132248-22132298)
chr4 (29-100)||(22782576-22782646)
chr4 (29-99)||(5635318-5635386)
chr4 (29-99)||(9148658-9148727)
chr4 (29-87)||(11435378-11435435)
chr4 (31-81)||(17662109-17662158)
chr4 (29-87)||(27499466-27499524)
chr4 (29-99)||(31849440-31849508)
chr4 (29-77)||(11006116-11006163)
chr4 (29-77)||(11008430-11008477)
chr4 (37-81)||(18311234-18311278)
chr4 (29-81)||(22044250-22044301)
chr4 (44-100)||(44599679-44599734)
chr4 (29-77)||(51015668-51015715)
chr4 (29-100)||(16931630-16931700)
chr4 (29-80)||(22134476-22134526)
chr4 (30-77)||(38409628-38409674)
chr4 (29-100)||(47210636-47210706)
chr4 (31-82)||(47275144-47275195)
chr4 (29-99)||(7941746-7941814)
chr4 (40-86)||(13547584-13547630)
chr4 (29-87)||(41997905-41997963)
chr4 (30-87)||(48486740-48486797)
[»] chr1 (59 HSPs)
chr1 (31-101)||(6995538-6995608)
chr1 (29-87)||(25251133-25251191)
chr1 (29-87)||(2949091-2949149)
chr1 (29-87)||(39932444-39932502)
chr1 (31-99)||(39462888-39462956)
chr1 (29-100)||(50078634-50078706)
chr1 (29-100)||(31424861-31424932)
chr1 (34-100)||(18839957-18840023)
chr1 (29-102)||(31490276-31490348)
chr1 (29-85)||(13215448-13215504)
chr1 (29-101)||(13358943-13359013)
chr1 (29-100)||(16226538-16226608)
chr1 (29-100)||(16429317-16429388)
chr1 (29-100)||(17185978-17186049)
chr1 (29-100)||(28206911-28206982)
chr1 (29-100)||(46431547-46431617)
chr1 (29-100)||(50307388-50307459)
chr1 (29-87)||(9459289-9459346)
chr1 (29-87)||(9463116-9463173)
chr1 (32-78)||(17324500-17324546)
chr1 (29-99)||(23816254-23816323)
chr1 (29-87)||(25248410-25248468)
chr1 (29-99)||(31735365-31735434)
chr1 (29-99)||(47906635-47906704)
chr1 (29-87)||(50248429-50248487)
chr1 (29-103)||(51750408-51750480)
chr1 (30-99)||(31422706-31422775)
chr1 (29-86)||(47451995-47452052)
chr1 (29-81)||(9240952-9241004)
chr1 (29-81)||(27336802-27336854)
chr1 (29-99)||(4131221-4131292)
chr1 (29-99)||(13762205-13762275)
chr1 (29-100)||(14097814-14097885)
chr1 (29-100)||(51757904-51757974)
chr1 (29-87)||(11457334-11457392)
chr1 (29-99)||(13447117-13447185)
chr1 (29-87)||(16231933-16231990)
chr1 (29-75)||(17324438-17324484)
chr1 (29-87)||(23786209-23786266)
chr1 (29-87)||(24326032-24326089)
chr1 (35-77)||(25860275-25860317)
chr1 (29-77)||(3579452-3579500)
chr1 (29-81)||(15294695-15294746)
chr1 (29-81)||(15823914-15823966)
chr1 (29-81)||(27338993-27339045)
chr1 (40-100)||(41647296-41647356)
chr1 (29-81)||(47177732-47177783)
chr1 (29-100)||(2617887-2617956)
chr1 (29-100)||(20291826-20291895)
chr1 (29-84)||(28998109-28998164)
chr1 (29-84)||(29003825-29003880)
chr1 (29-100)||(38925327-38925398)
chr1 (40-87)||(40134319-40134366)
chr1 (45-87)||(16432767-16432809)
chr1 (29-99)||(20302811-20302879)
chr1 (31-81)||(47180085-47180134)
chr1 (40-77)||(12302373-12302410)
chr1 (46-99)||(18307490-18307543)
chr1 (205-242)||(33485851-33485888)
[»] chr2 (31 HSPs)
chr2 (29-102)||(22287178-22287251)
chr2 (29-81)||(17849457-17849509)
chr2 (29-96)||(27105142-27105209)
chr2 (29-101)||(45238840-45238912)
chr2 (29-100)||(21520533-21520604)
chr2 (34-100)||(11739420-11739486)
chr2 (29-87)||(28196975-28197033)
chr2 (30-87)||(22874450-22874507)
chr2 (29-81)||(19007980-19008032)
chr2 (29-81)||(38020420-38020472)
chr2 (29-97)||(45279844-45279911)
chr2 (29-100)||(19501842-19501911)
chr2 (29-99)||(22162869-22162939)
chr2 (29-82)||(42923368-42923421)
chr2 (29-85)||(3022512-3022568)
chr2 (29-81)||(19504195-19504246)
chr2 (29-81)||(23452095-23452146)
chr2 (29-87)||(14837608-14837667)
chr2 (29-100)||(36560980-36561050)
chr2 (29-87)||(6258674-6258732)
chr2 (29-87)||(36558733-36558790)
chr2 (29-99)||(43623423-43623493)
chr2 (29-86)||(34979447-34979504)
chr2 (29-81)||(28459055-28459107)
chr2 (29-81)||(35215451-35215502)
chr2 (29-81)||(42453822-42453873)
chr2 (29-101)||(45332018-45332089)
chr2 (45-100)||(6263992-6264047)
chr2 (44-78)||(15539396-15539430)
chr2 (29-70)||(7462819-7462860)
chr2 (45-82)||(42923310-42923347)
[»] chr8 (35 HSPs)
chr8 (31-99)||(15073134-15073202)
chr8 (29-100)||(27827410-27827480)
chr8 (29-87)||(27106759-27106817)
chr8 (29-99)||(27829721-27829790)
chr8 (29-100)||(15068402-15068473)
chr8 (35-87)||(183246-183298)
chr8 (29-100)||(15956373-15956444)
chr8 (29-100)||(28283061-28283131)
chr8 (29-81)||(2467996-2468048)
chr8 (40-100)||(14419034-14419094)
chr8 (29-81)||(14808181-14808233)
chr8 (29-81)||(15185582-15185634)
chr8 (29-101)||(35872299-35872371)
chr8 (29-100)||(18811133-18811203)
chr8 (29-100)||(25952940-25953011)
chr8 (29-100)||(37214108-37214179)
chr8 (29-87)||(13858346-13858404)
chr8 (29-99)||(15809643-15809711)
chr8 (31-81)||(33541273-33541323)
chr8 (31-100)||(41383086-41383155)
chr8 (40-100)||(14477681-14477741)
chr8 (29-101)||(32339735-32339805)
chr8 (30-81)||(5372044-5372095)
chr8 (29-100)||(43530540-43530610)
chr8 (29-87)||(21482728-21482786)
chr8 (29-87)||(24873051-24873108)
chr8 (29-81)||(4424444-4424495)
chr8 (29-81)||(22684511-22684562)
chr8 (29-77)||(36865959-36866007)
chr8 (29-81)||(43082398-43082449)
chr8 (29-80)||(44721268-44721318)
chr8 (29-99)||(18813307-18813376)
chr8 (29-102)||(3874418-3874490)
chr8 (40-81)||(27911508-27911549)
chr8 (40-81)||(27957927-27957968)
[»] scaffold0005 (3 HSPs)
scaffold0005 (29-100)||(50387-50458)
scaffold0005 (29-99)||(52386-52456)
scaffold0005 (29-87)||(183494-183551)
[»] chr7 (49 HSPs)
chr7 (29-100)||(26804885-26804956)
chr7 (29-100)||(44724952-44725023)
chr7 (29-99)||(27306076-27306146)
chr7 (29-81)||(7092071-7092123)
chr7 (29-100)||(7094300-7094370)
chr7 (29-100)||(13099316-13099387)
chr7 (29-87)||(36008-36065)
chr7 (29-99)||(44943-45012)
chr7 (29-100)||(443972-444045)
chr7 (29-99)||(9027034-9027103)
chr7 (29-99)||(42330846-42330916)
chr7 (29-98)||(28487932-28488000)
chr7 (31-99)||(31434892-31434961)
chr7 (29-101)||(11759506-11759577)
chr7 (29-100)||(4295780-4295851)
chr7 (29-100)||(7471820-7471890)
chr7 (29-100)||(38394365-38394435)
chr7 (29-100)||(42223530-42223601)
chr7 (29-99)||(1850360-1850429)
chr7 (29-87)||(9679434-9679492)
chr7 (29-101)||(3878958-3879029)
chr7 (29-77)||(24748964-24749012)
chr7 (31-87)||(25542909-25542964)
chr7 (29-100)||(20297741-20297811)
chr7 (29-100)||(21678436-21678507)
chr7 (29-100)||(28485944-28486014)
chr7 (29-87)||(1606758-1606815)
chr7 (29-87)||(3036103-3036160)
chr7 (29-87)||(20299839-20299896)
chr7 (29-99)||(20626412-20626481)
chr7 (29-99)||(20630303-20630372)
chr7 (29-99)||(20642722-20642791)
chr7 (29-100)||(37411964-37412037)
chr7 (29-99)||(48458032-48458100)
chr7 (29-82)||(18345920-18345972)
chr7 (29-82)||(22251447-22251500)
chr7 (29-81)||(1046776-1046827)
chr7 (30-102)||(7469861-7469931)
chr7 (29-81)||(20137010-20137062)
chr7 (29-81)||(38397018-38397069)
chr7 (29-81)||(40550208-40550259)
chr7 (29-81)||(40836602-40836653)
chr7 (30-81)||(1502833-1502883)
chr7 (29-100)||(24465905-24465976)
chr7 (29-80)||(40946709-40946759)
chr7 (40-86)||(9681206-9681252)
chr7 (29-99)||(43253358-43253426)
chr7 (29-74)||(21990525-21990570)
chr7 (29-74)||(39145856-39145901)
[»] chr5 (51 HSPs)
chr5 (30-100)||(18511055-18511125)
chr5 (32-100)||(6745440-6745508)
chr5 (29-100)||(36402169-36402240)
chr5 (29-87)||(21289123-21289181)
chr5 (29-87)||(21948398-21948456)
chr5 (29-87)||(40221893-40221951)
chr5 (29-100)||(6747673-6747744)
chr5 (29-87)||(18469378-18469436)
chr5 (29-108)||(26098120-26098201)
chr5 (29-99)||(38959972-38960041)
chr5 (29-99)||(39854851-39854921)
chr5 (31-100)||(18467055-18467124)
chr5 (40-100)||(18597020-18597080)
chr5 (29-100)||(27910802-27910873)
chr5 (29-100)||(34476893-34476962)
chr5 (29-100)||(34479258-34479327)
chr5 (29-100)||(39798399-39798469)
chr5 (29-100)||(41585579-41585650)
chr5 (29-87)||(16092057-16092115)
chr5 (29-87)||(27912905-27912963)
chr5 (29-87)||(31179225-31179282)
chr5 (29-87)||(34530571-34530629)
chr5 (40-77)||(2818199-2818236)
chr5 (29-81)||(2724257-2724309)
chr5 (29-81)||(4410390-4410441)
chr5 (29-81)||(10587184-10587235)
chr5 (29-77)||(17818357-17818405)
chr5 (31-99)||(21684294-21684360)
chr5 (29-80)||(25921333-25921383)
chr5 (29-100)||(31465832-31465903)
chr5 (29-99)||(658204-658273)
chr5 (29-87)||(3372989-3373046)
chr5 (31-81)||(16776526-16776576)
chr5 (29-99)||(38882457-38882525)
chr5 (29-78)||(2175270-2175318)
chr5 (29-78)||(12555779-12555828)
chr5 (45-86)||(20505700-20505741)
chr5 (31-100)||(25904469-25904537)
chr5 (31-98)||(6756858-6756926)
chr5 (29-81)||(10750069-10750120)
chr5 (29-81)||(10757545-10757596)
chr5 (29-81)||(15354432-15354483)
chr5 (29-81)||(15356708-15356759)
chr5 (29-81)||(23665415-23665466)
chr5 (29-81)||(23741715-23741766)
chr5 (29-81)||(23793121-23793172)
chr5 (40-100)||(24127232-24127292)
chr5 (29-77)||(37705649-37705697)
chr5 (29-80)||(31543103-31543153)
chr5 (29-100)||(36208937-36209008)
chr5 (33-82)||(1189469-1189518)
[»] scaffold0011 (1 HSPs)
scaffold0011 (29-97)||(35969-36037)
[»] scaffold0267 (1 HSPs)
scaffold0267 (29-85)||(404-459)
[»] scaffold0025 (1 HSPs)
scaffold0025 (29-81)||(69150-69202)
[»] scaffold0031 (1 HSPs)
scaffold0031 (40-99)||(79572-79631)
[»] scaffold0004 (1 HSPs)
scaffold0004 (45-100)||(80251-80306)
[»] scaffold0250 (1 HSPs)
scaffold0250 (29-81)||(3257-3308)
[»] scaffold0131 (1 HSPs)
scaffold0131 (29-81)||(14248-14299)
[»] scaffold0068 (1 HSPs)
scaffold0068 (31-99)||(29550-29616)
[»] scaffold0472 (1 HSPs)
scaffold0472 (29-100)||(6577-6647)
[»] scaffold0127 (1 HSPs)
scaffold0127 (29-100)||(12714-12784)
[»] scaffold0140 (2 HSPs)
scaffold0140 (29-102)||(24770-24842)
scaffold0140 (29-81)||(22495-22546)
[»] scaffold0370 (1 HSPs)
scaffold0370 (29-81)||(1311-1362)
[»] scaffold0045 (1 HSPs)
scaffold0045 (29-97)||(85603-85671)
[»] scaffold0339 (1 HSPs)
scaffold0339 (31-82)||(4369-4420)
[»] scaffold0038 (1 HSPs)
scaffold0038 (31-102)||(41322-41391)


Alignment Details
Target: chr6 (Bit Score: 384; Significance: 0; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 101 - 684
Target Start/End: Original strand, 30934863 - 30935454
Alignment:
Q  101 atgatgtgacagtacacacgggttacaaataacttctatacatactagggcttatattgtt----------acatacttgctcataaacacacctaccaa 190  Q
    |||||||||||||||||| |||||||||||| |||||| | ||||||||| |||||||||           |||||||||||||||||||| ||||||||    
T  30934863 atgatgtgacagtacacatgggttacaaatagcttctacatatactagggattatattgtagacattatacacatacttgctcataaacacgcctaccaa 30934962  T
Q  191 gctacaacaattggctaaatatttcaaacatacacatgattccaatcaaatacttcaacattttcaactcattatccaaagattcaatctaaaggggatt 290  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||| | || ||||||    
T  30934963 gctacaacaattggttaaagatttcaaacatacacatgattccaatcaaatacttccacattttcaattcattctcaaaagattcaatgtgaacgggatt 30935062  T
Q  291 agaaacccacgtacactgtcatgtcattattcaacatcacacatcaccatagataacgtttgaagttaacggatagatgaaactgaataacgcaaaataa 390  Q
     ||||||||||||||||||||||||||  || |||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  30935063 tgaaacccacgtacactgtcatgtcatcgtttaacatcgcacatcaccataaataacgtttgaagttaacggatagatgaaaccaaataacgcaaaataa 30935162  T
Q  391 acccaacgtctattgtgatctttcaaaaaattcaaagactaaatagaacgatagttacaaattcagagattatctcgtctgttcattcattcattttttc 490  Q
    |||||| ||||| ||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||||||||  |||||||    
T  30935163 acccaaagtctactgtgatcttacgaaaaattcaaagactaaattgaacgatatttacaaattcagagactatcttgtctattcattcatt--ttttttc 30935260  T
Q  491 aggtgaaagacttcttaccataatatatagtggcagagcttttcttttcaagaatgtgagcttcatcaaaataatttgtggcttttctaagttgctcata 590  Q
    |||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  30935261 aggtaaaagaccgcttaccataatatatagtggcagagcctttcttttcaagaatgtgagcttcatcaaaataatttgtggctttcctaagtagctcata 30935360  T
Q  591 ggggaagatttgccaattcaatttattctgctttggaaatatgtcagaagtgctagtgaagcagcaacacatacagagatcccaccccattgcc 684  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30935361 ggggaagatttgccacttcaatttattctgctttggaaatatgtcagaagtgctagtgaagcagcagcacatacagagatcccaccccattgcc 30935454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 428 - 681
Target Start/End: Original strand, 30994106 - 30994360
Alignment:
Q  428 actaaatagaacgatagttacaaattcagagattatctcgtctgttcattcattcattttt-tcaggtgaaagacttcttaccataatatatagtggcag 526  Q
    ||||||| |||||||||||||||| ||||||| ||  |  ||| |||| |||    ||||| |||||| ||| |||||||||||||||||| |||||  |    
T  30994106 actaaattgaacgatagttacaaactcagagactaaattttctattcactcaaagttttttatcaggtaaaacacttcttaccataatatacagtgggcg 30994205  T
Q  527 agcttttcttttcaagaatgtgagcttcatcaaaataatttgtggcttttctaagttgctcataggggaagatttgccaattcaatttattctgctttgg 626  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  30994206 agcctttcttatcaagaatgtgagcttcatcaaaataatttgtggcttttctaagttgctcatatgggaagatttgccaattcaatttactctgctttgg 30994305  T
Q  627 aaatatgtcagaagtgctagtgaagcagcaacacatacagagatcccaccccatt 681  Q
    |||| | ||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  30994306 aaatgtttcagatgtgctagtgaagcagcaacacatacagatatcccacctcatt 30994360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 30993874 - 30994081
Alignment:
Q  166 acttgctcataaacacacctaccaagctacaacaattggctaaatatttcaaacatacacatgattccaatcaaatacttcaacattttcaactcatta- 264  Q
    |||| ||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||     
T  30993874 actttctcttaaacacacctagcaagctacaacaattggctaatgatttcaaacatacacatgattccaatcaaatacctcaacattttcta-tcaatac 30993972  T
Q  265 tccaaagattcaatctaaaggggattagaaacccacgtacactgtcatgtcattattcaacatcacacatcaccatagataacgtttgaagttaacggat 364  Q
    || ||||||||||| |||||| ||||  ||||||||||  |||| ||| | |||||| |||||  ||| ||| ||||||||||||||||||||||||||     
T  30993973 tctaaagattcaatataaaggtgatttaaaacccacgtcgactgccatatgattatt-aacatttcacgtcatcatagataacgtttgaagttaacggag 30994071  T
Q  365 agatgaaact 374  Q
    ||||||||||    
T  30994072 agatgaaact 30994081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 415 - 575
Target Start/End: Original strand, 30965348 - 30965507
Alignment:
Q  415 aaaaaattcaaagactaaatagaacgatagttacaaattcagagattatctcgtctgttcattcattcattttttcaggtgaaagacttcttaccataat 514  Q
    |||||||||| | ||||||| || | ||||||||||||||||||| ||  |  ||| |||| |||    |||||||| || |||||||||||||||||||    
T  30965348 aaaaaattcagaaactaaattgaccaatagttacaaattcagagactaaattttctattcactcaaat-ttttttcatgtaaaagacttcttaccataat 30965446  T
Q  515 atatagtggcagagcttttcttttcaagaatgtgagcttcatcaaaataatttgtggcttt 575  Q
    ||| |||||| |||| | ||||||||||||||||||||| ||||||||||| |||||||||    
T  30965447 atacagtggccgagcctctcttttcaagaatgtgagcttgatcaaaataatatgtggcttt 30965507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 13057589 - 13057659
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  13057589 ggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 30728739 - 30728687
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  30728739 ggttgtttgactatcccttgctccacacatcaagtttgttattggtgtgattt 30728687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 15541060 - 15540989
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| |||||| |||||  | |||||||||    
T  15541060 ggtttcttgactatcccttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaacaa 15540989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 24338365 - 24338294
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||| |||||  |||| ||||||    
T  24338365 ggttgcttgactatctcttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacaa 24338294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 3629781 - 3629723
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  3629781 ggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgttttctcatc 3629723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 26065386 - 26065437
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  26065386 ggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgattt 26065437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 26085355 - 26085406
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  26085355 ggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgattt 26085406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 2628795 - 2628726
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  2628795 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaa 2628726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 8717264 - 8717194
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  8717264 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 8717194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 9020339 - 9020398
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  9020339 tatctcttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 15367428 - 15367499
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| | ||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  15367428 ggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 15367499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 19704473 - 19704419
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctc 84  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  19704473 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttctc 19704419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 26932472 - 26932402
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  26932472 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcaaattcacaacaa 26932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 15346743 - 15346801
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||||    
T  15346743 ggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgatttttcatc 15346801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 18322497 - 18322566
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| ||||   ||||||||||    
T  18322497 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatagaattcgcaaca 18322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 29754618 - 29754561
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  29754618 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 29754561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 11982941 - 11982869
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||||| ||| |||||||||| |||||||||| |||||||||||||||| |||||  |||| ||||||||    
T  11982941 ggttgcttgattattccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaacaaat 11982869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 620 - 681
Target Start/End: Original strand, 30965503 - 30965564
Alignment:
Q  620 gctttggaaatatgtcagaagtgctagtgaagcagcaacacatacagagatcccaccccatt 681  Q
    ||||||||||| | ||||||||||||||||||||||| |||||| ||||||| |||| ||||    
T  30965503 gctttggaaatgtttcagaagtgctagtgaagcagcagcacatagagagatctcacctcatt 30965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 1069631 - 1069575
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||||||||||||||||||| | |||||||||||| |  |||||||||    
T  1069631 ttgcttgactatcccttgctccatacatcgaatttgttattggtatattttctcatc 1069575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 4816140 - 4816089
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  4816140 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 4816089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 5273125 - 5273074
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  5273125 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 5273074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 25048610 - 25048662
Alignment:
Q  205 ctaaatatttcaaacatacacatgattccaatcaaatacttcaacattttcaa 257  Q
    ||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  25048610 ctaaaaatttcaaacatacacataatttcaatgaaatacttcaacattttcaa 25048662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 30034514 - 30034445
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||    
T  30034514 ggttgcttgattatcc-ttgctccatacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaaa 30034445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 32280393 - 32280445
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||| ||||||||||||||||||||||| |||||||||    
T  32280393 ggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattt 32280445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 3394767 - 3394838
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| ||||| || ||||| |||||||| || ||||||||||| |||||||||  |||||||||||    
T  3394767 ggttgcttgattatccatttctccacacatcaagatttttattggtgtgttttctcatcgaattcgcaacaa 3394838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 13040173 - 13040232
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| |||||  ||||||||||    
T  13040173 tatccattgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaaca 13040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 26068304 - 26068234
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  26068304 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 26068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 12195423 - 12195366
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  12195423 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 12195366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 14466721 - 14466779
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||||| |||||| || ||||||| ||| ||||||||||||||| |||||    
T  14466721 ggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgatttttcatc 14466779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 14507086 - 14507037
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgat 79  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  14507086 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 14507037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 22491009 - 22491067
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| ||||| | |||||| |||| |||||||||||||||||||||| |||||    
T  22491009 ggttgcttgattatccttagctccacacattaagtttgttattggtgtgatttttcatc 22491067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 26066030 - 26065973
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  26066030 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 26065973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 374
Target Start/End: Original strand, 30965201 - 30965336
Alignment:
Q  237 caaatacttcaacattttcaactcattatccaaagattcaatctaaaggggattagaaacccacgtacactgtcatgtcattattcaacatcacacatca 336  Q
    ||||||| ||||||||||| | ||||  || |||| |||||| |||||| ||||  ||||||||||  ||| |||||| | |||| |||||  ||| |||    
T  30965201 caaatacctcaacattttctattcatc-tctaaaggttcaatgtaaaggtgatttaaaacccacgtcgactatcatgtgaatatt-aacattgcacgtca 30965298  T
Q  337 ccatagataacgtttgaagttaacggatagatgaaact 374  Q
     ||||||||||| ||||||||| |||| ||||||||||    
T  30965299 tcatagataacgcttgaagttatcggagagatgaaact 30965336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 33309261 - 33309312
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  33309261 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 33309312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 33311530 - 33311581
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  33311530 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 33311581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 10584355 - 10584390
Alignment:
Q  42 tcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||||| |||||||||||||||||||||||    
T  10584355 tcccttgctccacacatcaagtttgttattggtgtg 10584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 28241229 - 28241160
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||| ||||||||    
T  28241229 ttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcacaacaaat 28241160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 41147650 - 41147738
Alignment:
Q  176 aaacacacctaccaagctacaacaattggctaaatatttcaaacatacacatgattccaatcaaatacttcaacattttcaactcatta 264  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  41147650 aaacacacctaccaagctacaacaattggtaaaagatttcaaacatacacataattccaatcaaacacttcaacattttcaattcatta 41147738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 53915408 - 53915338
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  53915408 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 53915338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 36012173 - 36012243
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  36012173 ggttgtttgattatcccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 1313751 - 1313822
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga-tttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||  ||||||||||    
T  1313751 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgagtttttcatcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 3315030 - 3315101
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||  |||||||||||    
T  3315030 ggttgcttgattatcccttgctccacacatcaagtttattattggtgtgttttctcatcgaattcgcaacaa 3315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 43423378 - 43423307
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||  |||||||||||    
T  43423378 ggttgcttgactatcccttgctccacacatcaactttgttattggtgtaatttttcatcgaattcgcaacaa 43423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 53917576 - 53917505
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||   ||||||||||    
T  53917576 ggttgcttgactatcccttgctccacacatcaagtttgttattagtgtgatttttcatcgatttcgcaacaa 53917505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 18099079 - 18099009
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  18099079 gttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcccaacaa 18099009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 45883287 - 45883345
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  45883287 ggttgcttaactatcccttgctccacacatcaagtttgttattggtgtgatttttcatc 45883345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 51674679 - 51674627
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  51674679 ggttgcttgattattccttgctccatacatcaagtttgttattggtgtgattt 51674627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 1321828 - 1321898
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  1321828 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattt-tcatcgaattcgcaacaa 1321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 42990648 - 42990718
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  42990648 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattt-tcatcgaattcgcaacaa 42990718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 43226426 - 43226496
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||    
T  43226426 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttctcatcgaattcgcaacaa 43226496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 43421330 - 43421259
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||  |||||||||||    
T  43421330 ggttgcttgactatatcttgctccacacatcaactttgttattggtgtgatttttcatcgaattcgcaacaa 43421259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 18096810 - 18096740
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||||| |||| |||||  ||||||||||    
T  18096810 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 24980056 - 24980114
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  24980056 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgttttctcatc 24980114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 5522534 - 5522483
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  5522534 ggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgattt 5522483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 27635568 - 27635516
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  27635568 ggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattt 27635516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 32219432 - 32219484
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| ||||||||||||||||| |||||||||    
T  32219432 ggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgattt 32219484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 6065702 - 6065632
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||||||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  6065702 ggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 6065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 11168451 - 11168520
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  11168451 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaa 11168520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 28101918 - 28101847
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||| |||| |||||  |||| ||||||    
T  28101918 ggttgcttgattatcccttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaacaa 28101847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 747108 - 747165
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  747108 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 747165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 10084297 - 10084229
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  10084297 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcggattcgcaaca 10084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 10191220 - 10191152
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  10191220 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcagattcgcaaca 10191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 41849402 - 41849470
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  41849402 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 43228636 - 43228693
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  43228636 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttctcatc 43228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 38890390 - 38890442
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||    
T  38890390 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttc 38890442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 51943717 - 51943758
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttat 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  51943717 ggttgcttgactatcccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 456257 - 456308
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  456257 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 456308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 458634 - 458685
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  458634 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 458685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5192000 - 5192051
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  5192000 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 5192051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 10955935 - 10955884
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  10955935 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 10955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 53893962 - 53893911
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  53893962 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 53893911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 1626595 - 1626548
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  1626595 gttgcttgattattccttgctccacacatcaagtttgttattggtgtg 1626548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 10621435 - 10621365
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  10621435 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 10621365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 25533774 - 25533843
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  25533774 ggttgcttga-tatctcttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 25533843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 4103804 - 4103736
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||| |||||||||| ||||||||  |||||||||||||||||||||||||| |||||  ||||||||||    
T  4103804 ggttgtttgactatcc-ttgctccacgcatcaagtttgttattggtgtgattt-tcatcgaattcgcaaca 4103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 9604516 - 9604447
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||| ||||| ||| |||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  9604516 ggttacttgattattccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 9604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 12267889 - 12267831
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||| || ||||||| ||||||| |||||||||||||| |||| |||||    
T  12267889 ggttgcttgactattccctgctccacacatcaaatttgttattggtgtaatttttcatc 12267831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 17795599 - 17795657
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||||  |||||||| ||||||| ||| ||||||||||||||| |||||    
T  17795599 ggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatc 17795657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 19104039 - 19104097
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||||  |||||||| ||||||| ||| ||||||||||||||| |||||    
T  19104039 ggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatc 19104097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 22114211 - 22114143
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| ||| |||||||||||||| |||||  ||||||||||    
T  22114211 ggttgcttgattatcccttgctccacacatcaag-ttgctattggtgtgattt-tcatcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 3307111 - 3307164
Alignment:
Q  35 ttgactatcccttgctccatacatcaag-tttgttattggtgtgatttctcatc 87  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  3307111 ttgattatcccttgcttcatacatcaagttttgttattggtgtgttttctcatc 3307164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 15781226 - 15781271
Alignment:
Q  32 tgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  15781226 tgcttgattatcccttactccacacatcaagtttgttattggtgtg 15781271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 28181362 - 28181399
Alignment:
Q  44 ccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||||||||||||||||    
T  28181362 ccttgctccacacatcaagtttgttattggtgtgattt 28181399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 880366 - 880314
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||  |||||||||| |||||||||||||||| ||||||||||    
T  880366 ggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtgattt 880314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5886547 - 5886598
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||  |||||||||||||| |||||||| ||||||||||||||||||    
T  5886547 ggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgattt 5886598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5900020 - 5900071
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||  |||||||||||||| |||||||| ||||||||||||||||||    
T  5900020 ggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgattt 5900071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 10958231 - 10958180
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  10958231 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt 10958180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 25389256 - 25389307
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||| ||||||    
T  25389256 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtatgattt 25389307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 6063352 - 6063282
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | ||||||||| |||| |||||||||| ||||| |||||||||| |||||  |||||||||||    
T  6063352 ggttgcttaattatcccttgttccacacatcaagtt-gttatcggtgtgatttttcatcgaattcgcaacaa 6063282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 7606511 - 7606465
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgt 76  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  7606511 ggttgcttgactatctcttgctccacacatcaag-ttgttattggtgt 7606465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 28412939 - 28412869
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| ||||| |||||||||||||| |||||||| |||||||||||||| ||| |||||  |||| ||||||    
T  28412939 ggttacttgattatcccttgctccacacatcaag-ttgttattggtgtgttttttcatcgaattcacaacaa 28412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 18163010 - 18163068
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||| ||| |||||||| ||||| ||||||| ||| ||||||||||||||| |||||    
T  18163010 ggttgcctgattatcccttactccacacatcaaatttattattggtgtgatttttcatc 18163068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 28761357 - 28761299
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||| |||| |||| ||||||||| |||||||| || ||||||||||||||| |||||    
T  28761357 ggttgtttgattatcacttgctccacacatcaagattattattggtgtgatttttcatc 28761299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 38210732 - 38210777
Alignment:
Q  41 atcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||    
T  38210732 atcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 38210777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 47701564 - 47701522
Alignment:
Q  55 acatcaagtttgttattggtgtgatttctcatcttattcgcaa 97  Q
    ||||||||||||||||||||||||||| |||||  ||||||||    
T  47701564 acatcaagtttgttattggtgtgatttttcatcgaattcgcaa 47701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 50494348 - 50494405
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||| ||||||||| |||||||||| |||||||||||||||| |||||    
T  50494348 ggttgcttaattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatc 50494405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 31151685 - 31151757
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||||| |||  ||||||||| ||||||||| | ||||||||||||||| |||||  |||| ||||||||    
T  31151685 ggttgcttgattattacttgctccacacatcaagtat-ttattggtgtgatttttcatcgaattcacaacaaat 31151757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 42992741 - 42992782
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||||| | ||||||||||||||||| |||||||||    
T  42992741 tatcccttgctctacacatcaagtttgttattagtgtgattt 42992782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 33415404 - 33415334
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||||    
T  33415404 ggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtgatttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 14789343 - 14789272
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  14789343 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 14789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 14787344 - 14787274
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  14787344 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 22800775 - 22800705
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||  ||||||||||    
T  22800775 ggttgcttgactatcccttgctccccacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 22800705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 37312994 - 37312924
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  37312994 ggttgcttgactatcccttgctccacacatcaagtttattattggtgtgatttttcatcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 38928094 - 38928024
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  38928094 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 3824519 - 3824467
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3824519 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattt 3824467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 49088974 - 49089046
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||  ||||||||||||    
T  49088974 ggttgcttgactatcccttactcaacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaaa 49089046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 5101334 - 5101405
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||  |||| ||||||    
T  5101334 ggttgcttgactatcccttgatccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaa 5101405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 22802647 - 22802576
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  22802647 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 22802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 36921408 - 36921337
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  36921408 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 36921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 53405556 - 53405627
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||  |||||||||||    
T  53405556 ggttgcttgattatcccttgctccacacatcaagtttattattggtgtgatttttcatcgaattcgcaacaa 53405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 37089282 - 37089212
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  37089282 ggttgcttgattatccattgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 37089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 36919499 - 36919432
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgca 96  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||    
T  36919499 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgca 36919432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 6765265 - 6765323
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  6765265 ggttgcttgattatcccttactccacacatcaagtttgttattggtgtgatttttcatc 6765323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 26085886 - 26085818
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||  ||||||||||    
T  26085886 ggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtga-ttctcatcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 38270064 - 38270010
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttct 83  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  38270064 ggttgcttgactatcccttactccacacatcaagtttgttattggtgtgttttct 38270010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 24348624 - 24348695
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||||    
T  24348624 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaaat 24348695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 3937195 - 3937124
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||||||||||||  |||||||||| |||||||||||||||| |||||  ||||||||||||    
T  3937195 ggttgcttgattatcccttgctcctcacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaaa 3937124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 18409263 - 18409211
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  18409263 ggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattt 18409211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 22780281 - 22780210
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||| | |||||||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||||    
T  22780281 ggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaaa 22780210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 24446572 - 24446500
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||||||| || || ||||||||||||||||||||||| |||||||||  |||| |||||||    
T  24446572 ggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaaa 24446500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 619368 - 619297
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||||||| ||||| ||||||| ||| ||||||||||| |||||||||  || ||||||||    
T  619368 ggttgcttgactatcccttactccacacatcaaatttattattggtgtgttttctcatcgaatccgcaacaa 619297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 16453726 - 16453797
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  16453726 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 16453797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 47868825 - 47868895
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||||||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  47868825 ggttgcctgattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 47868895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 2891710 - 2891768
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| ||| | |||||||| ||||||||||||||||||||||||||| |||||    
T  2891710 ggttgcttgattattctttgctccacacatcaagtttgttattggtgtgatttttcatc 2891768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 8631327 - 8631259
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  8631327 gttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaa 8631259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 14633741 - 14633798
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  14633741 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttctcatc 14633798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 16455644 - 16455702
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  16455644 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 16455702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 19096300 - 19096370
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||| |||||  ||||||||||    
T  19096300 ggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgcaaca 19096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 56030875 - 56030945
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||| |||||||| ||||||||| | ||||||||| ||||||||||||||| |||||  ||||||||||    
T  56030875 ggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgatttttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 12395760 - 12395703
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  12395760 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcat 12395703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 12400722 - 12400665
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  12400722 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcat 12400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 2484783 - 2484732
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  2484783 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 2484732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 6133255 - 6133307
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||| ||||    
T  6133255 ggttgcttgattattccttgctccacacatcaagtttgttattggtgtaattt 6133307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 9174055 - 9173985
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||||||||||||| |||||||| |||||||| ||||||||| |||||  ||||||||||||    
T  9174055 ggttgcttgattatcccttgctccacacatcaag-ttgttattagtgtgattt-tcatcgaattcgcaacaaa 9173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 9176383 - 9176332
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  9176383 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 9176332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 11437789 - 11437856
Alignment:
Q  32 tgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||  |||| ||||||    
T  11437789 tgcttgattatctcttgctccatacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 11437856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 18847575 - 18847626
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  18847575 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 18847626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 22046596 - 22046545
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  22046596 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 22046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 40091330 - 40091258
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg-atttctcatcttattcgcaacaa 100  Q
    |||||||||| ||||  |||||||| ||||||||||||||||||||||| |||| |||||  |||||||||||    
T  40091330 ggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaatttttcatcgaattcgcaacaa 40091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 47563177 - 47563225
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  47563177 ggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 47563225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 22132298 - 22132248
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 80  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  22132298 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 22782646 - 22782576
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| || ||  |||||||||||    
T  22782646 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcgcaacaa 22782576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 5635386 - 5635318
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||| |||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  5635386 ggttgattgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaaca 5635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 9148658 - 9148727
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| |||| |||| |||||||||| |||||||||||| |||||||||  ||||||||||    
T  9148658 ggttgcttgattatctcttgttccacacatcaagtt-gttattggtgtgttttctcatcgaattcgcaaca 9148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 11435378 - 11435435
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||    
T  11435378 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatc 11435435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 17662158 - 17662109
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  17662158 ttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 17662109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 27499466 - 27499524
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||  ||| | |||||||| ||||||||||||||||||||||||||| |||||    
T  27499466 ggttgcttggttattcattgctccacacatcaagtttgttattggtgtgatttttcatc 27499524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 31849508 - 31849440
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  31849508 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaaca 31849440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 11006163 - 11006116
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  11006163 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 11006116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 11008477 - 11008430
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  11008477 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 11008430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 18311278 - 18311234
Alignment:
Q  37 gactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||    
T  18311278 gactatcacttgctccacacatcaagtttattattggtgtgattt 18311234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 22044301 - 22044250
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||| ||||    
T  22044301 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgttattt 22044250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 44599734 - 44599679
Alignment:
Q  44 ccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  44599734 ccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 44599679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 51015668 - 51015715
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  51015668 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 51015715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 16931700 - 16931630
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||||||||||||| |||| ||||| |||||||||||||||| |||||  |||| ||||||    
T  16931700 ggttgcttaattatcccttgctccacacattaagtt-gttattggtgtgatttttcatcgaattcacaacaa 16931630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 22134526 - 22134476
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 80  Q
    ||||| |||| |||||||||||||| |||||||| |||||||||||||||||    
T  22134526 ggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 38409628 - 38409674
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  38409628 gttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 38409674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 47210706 - 47210636
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||| ||||||||| |||||||||| ||||||||||||||||| || |  |||||||||||    
T  47210706 ggttgctttattatctcttgctccacacatcaagtt-gttattggtgtgatttcacaacgaattcgcaacaa 47210636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 47275144 - 47275195
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    |||||||| |||||||| ||||| |||||||||||||||||| |||| ||||    
T  47275144 ttgcttgattatcccttactccacacatcaagtttgttattgatgtgttttc 47275195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 7941746 - 7941814
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||| | |||||||||||||| |||||||| ||||| |||||||||||| |||||  ||||||||||    
T  7941746 ggttgcttaattatcccttgctccacacatcaag-ttgttgttggtgtgattt-tcatcgaattcgcaaca 7941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 13547584 - 13547630
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    |||| |||| |||| ||||||||||||||||||||||| ||||||||    
T  13547584 tatcacttgttccacacatcaagtttgttattggtgtgttttctcat 13547630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 41997905 - 41997963
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||| ||||| ||||||||||| ||||||||||| ||| |||||    
T  41997905 ggttgcttgattatcactttctccacacatcaagtttattattggtgtgttttttcatc 41997963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 48486740 - 48486797
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||| |||| |||| ||||  |||||| ||||||||||||||| |||||||||    
T  48486740 gttgcttgattatcgcttgttccacgcatcaaatttgttattggtgtgttttctcatc 48486797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 6995608 - 6995538
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||||    
T  6995608 ttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaaa 6995538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 25251191 - 25251133
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  25251191 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatc 25251133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 2949149 - 2949091
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  2949149 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatc 2949091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 39932444 - 39932502
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  39932444 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatc 39932502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 39462888 - 39462956
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  39462888 ttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 50078706 - 50078634
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga-tttctcatcttattcgcaacaa 100  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||  |||||||||||    
T  50078706 ggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaacaa 50078634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 31424932 - 31424861
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||   |||||||||||    
T  31424932 ggttgcttgagtattccttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaacaa 31424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 18839957 - 18840023
Alignment:
Q  34 cttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  18839957 cttgattattccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 18840023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 31490276 - 31490348
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||||| |||| ||||||||| |||||||||||| |||||||||||||| |||||  |||||||||||||    
T  31490276 ggttgcttgattatctcttgctccacacatcaagtttg-tattggtgtgatttttcatcgaattcgcaacaaat 31490348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 13215448 - 13215504
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctca 85  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  13215448 ggttgtttgactatcccttgctccacacatcaagtttattattggtgtgttttctca 13215504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 13358943 - 13359013
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||  ||||||||||||    
T  13358943 ggttgcttgactatcccttactccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaaa 13359013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 16226538 - 16226608
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  16226538 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 16226608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 16429317 - 16429388
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  16429317 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 16429388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 17186049 - 17185978
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||| ||||||||| | ||||||||| ||||||||||||||| |||||  |||| ||||||    
T  17186049 ggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatttttcatcaaattcacaacaa 17185978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 28206982 - 28206911
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||| |||||||||  |||| ||||||    
T  28206982 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaa 28206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 46431617 - 46431547
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  46431617 ggttgcttgattatctcttgctccaaacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 46431547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 50307459 - 50307388
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||||||||||||| ||||||||||| ||||||||||||||| |||||  |||| ||||||    
T  50307459 ggttgcctgattatcccttgctccagacatcaagtttattattggtgtgatttttcatcgaattcccaacaa 50307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 9459346 - 9459289
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  9459346 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 9459289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 9463173 - 9463116
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  9463173 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 9463116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 17324546 - 17324500
Alignment:
Q  32 tgcttgactatcccttgctccatacatcaagtttgttattggtgtga 78  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  17324546 tgcttgactatcccttactccacacatcaagtttgttattggtgtga 17324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 23816254 - 23816323
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| ||| |||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  23816254 ggttgcttgattattccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 25248468 - 25248410
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||| |||| ||||| |||||||||||||||||| |||||||| |||||    
T  25248468 ggttgcttgactattccttactccacacatcaagtttgttattgttgtgatttttcatc 25248410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 31735434 - 31735365
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||| ||||||||||  ||||||||||    
T  31735434 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtaatttctcatcgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 47906635 - 47906704
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  47906635 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 50248487 - 50248429
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  50248487 ggttgcttgattatcccttactccacacatcaaatttgttattggtgtgatttatcatc 50248429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 51750408 - 51750480
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaatg 103  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| | |||  ||||||||||||||    
T  51750408 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-ttatcgaattcgcaacaaatg 51750480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 31422775 - 31422706
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||| |||| ||| |||||||||| |||||||||||||||||| |||||||| |||||  ||||||||||    
T  31422775 gttgattgattattccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 47451995 - 47452052
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    ||||||||||||||||||||||| | ||||||| |||||||||| |||||||| ||||    
T  47451995 ggttgcttgactatcccttgctcgacacatcaaatttgttattgatgtgatttttcat 47452052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 9241004 - 9240952
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| || ||||||||||||||||||||||||    
T  9241004 ggttgcttgattatcacttgctccacacttcaagtttgttattggtgtgattt 9240952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 27336854 - 27336802
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||| ||| |||||||||||||| |||||||||||||||||| ||||||||    
T  27336854 ggttgcctgattatcccttgctccacacatcaagtttgttattgatgtgattt 27336802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 4131292 - 4131221
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga-tttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||  |||||||||||||||||||||||| ||| |||||  ||||||||||    
T  4131292 ggttgcttgattatctcttgctccgcacatcaagtttgttattggtgtgagtttttcatcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 13762205 - 13762275
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga-tttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||| ||||| |||||||||| ||||||||||||| |||||||||  ||||||||||    
T  13762205 ggttgcttgattatccctttctccacacatcaagtt-gttattggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 14097885 - 14097814
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| |||||| || ||||||||||||||||||||||| ||| || ||  |||||||||||    
T  14097885 ggttgcttgattatctcttgcttcacacatcaagtttgttattggtgtgttttttcttcgaattcgcaacaa 14097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 51757904 - 51757974
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||| |||| |||||  |||| ||||||    
T  51757904 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcatttttcatcgaattcacaacaa 51757974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 11457392 - 11457334
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||| ||| |||| |||||| || ||||||||||||||||||||||||||| |||||    
T  11457392 ggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtgatttttcatc 11457334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 13447185 - 13447117
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  13447185 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 16231933 - 16231990
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| ||||| |||||||| |||||||||| |||||||||||||||| |||||    
T  16231933 ggttgcttgattatccgttgctccacacatcaagtt-gttattggtgtgatttttcatc 16231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 17324438 - 17324484
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtg 75  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||    
T  17324438 ggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 23786209 - 23786266
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  23786209 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 23786266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 24326032 - 24326089
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||| ||||| |||||||||| |||||||||||||||| |||||    
T  24326032 ggttgcttgattatcccttactccacacatcaagtt-gttattggtgtgatttttcatc 24326089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 25860317 - 25860275
Alignment:
Q  35 ttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  25860317 ttgactatcccttgctccacacatcaagtttgatattggtgtg 25860275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 3579500 - 3579452
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||||||||    
T  3579500 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 3579452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15294746 - 15294695
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  15294746 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt 15294695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 15823914 - 15823966
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||| ||| || ||||| ||||| |||||||||||||||||||||||||||    
T  15823914 ggttgcctgattaccccttactccacacatcaagtttgttattggtgtgattt 15823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 27339045 - 27338993
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||| ||| ||||||||| |||| |||||||||||||||||| ||||||||    
T  27339045 ggttgcctgattatcccttgttccacacatcaagtttgttattgatgtgattt 27338993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 41647296 - 41647356
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| ||||||||  ||||||||||||||||||||||| |||||||||  |||| ||||||    
T  41647296 tatcacttgctccgcacatcaagtttgttattggtgtgttttctcatcgaattcacaacaa 41647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 47177732 - 47177783
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  47177732 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 47177783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 2617887 - 2617956
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| ||||||||||| || |||||||| |||||||||||||| ||| |||||  |||||||||||    
T  2617887 ggttgcttgattatcccttgcttcacacatcaag-ttgttattggtgtggttt-tcatcgaattcgcaacaa 2617956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 20291826 - 20291895
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| ||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  20291826 ggttacttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaacaa 20291895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 28998164 - 28998109
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctc 84  Q
    |||||| ||| |||| ||||||||| ||||||||||||| ||||||||| ||||||    
T  28998164 ggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgttttctc 28998109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 29003880 - 29003825
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctc 84  Q
    |||||| ||| |||| ||||||||| ||||||||||||| ||||||||| ||||||    
T  29003880 ggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgttttctc 29003825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 38925398 - 38925327
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||| ||| ||||| ||||||||||| ||||||||||| |||||||||  |||| ||||||    
T  38925398 ggttgcctgattatcacttactccacacatcaagtttattattggtgtgttttctcatcaaattcacaacaa 38925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 40134319 - 40134366
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||| ||||||||| |||||||||||||||||| |||||||| |||||    
T  40134319 tatcacttgctccacacatcaagtttgttattgatgtgatttttcatc 40134366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 16432767 - 16432809
Alignment:
Q  45 cttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||    
T  16432767 cttgctccacacatcaaatttgttattggtgtgatttttcatc 16432809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 20302811 - 20302879
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||| ||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  20302811 ggttacttgattatctcttgctccagacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 47180085 - 47180134
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  47180085 ttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 47180134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 12302410 - 12302373
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  12302410 tatcacttgctccacacatcaagtttgttattggtgtg 12302373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 18307490 - 18307543
Alignment:
Q  46 ttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||| |||||||||||||||||| |||  |||||||||  ||||||||||    
T  18307490 ttgctccacacatcaagtttgttattgatgtattttctcatcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 33485888 - 33485851
Alignment:
Q  205 ctaaatatttcaaacatacacatgattccaatcaaata 242  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  33485888 ctaaagatttcaaacatacacataattccaatcaaata 33485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 22287251 - 22287178
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||  |||| ||||||||    
T  22287251 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaaat 22287178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 17849457 - 17849509
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17849457 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattt 17849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 27105142 - 27105209
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgca 96  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||    
T  27105142 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgca 27105209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 45238912 - 45238840
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    ||||||||||||||| |||| |||| ||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  45238912 ggttgcttgactatcgcttggtccacacatcaagtttattattggtgtgatttttcatcgaattcgcaacaaa 45238840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 21520604 - 21520533
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||    
T  21520604 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaacaa 21520533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 11739486 - 11739420
Alignment:
Q  34 cttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  11739486 cttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 11739420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 28196975 - 28197033
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  28196975 ggttgctggactatcccttgctccacacatcaaatttgttattggtgtgatttttcatc 28197033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 22874450 - 22874507
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||    
T  22874450 gttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatc 22874507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 19007980 - 19008032
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  19007980 ggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattt 19008032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 38020420 - 38020472
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  38020420 ggttgcttgattattccttgctccatacatcaaatttgttattggtgtgattt 38020472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 45279911 - 45279844
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaa 97  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||  ||||||||    
T  45279911 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttctcatcgaattcgcaa 45279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 19501911 - 19501842
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  19501911 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaa 19501842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 22162939 - 22162869
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| ||||||||||| || |||||||  |||||||||||||| |||||||||  ||||||||||    
T  22162939 ggttgcttgattatcccttgcttcacacatcaaaattgttattggtgtgttttctcatcgaattcgcaaca 22162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 42923421 - 42923368
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||    
T  42923421 ggttgcttgattatctcttgctccacacatcaagtttgttattggtgtgttttc 42923368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 3022512 - 3022568
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctca 85  Q
    |||||||||| |||| ||||||||| ||||||||||||||||| ||||||| |||||    
T  3022512 ggttgcttgattatcacttgctccacacatcaagtttgttatttgtgtgatctctca 3022568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 19504246 - 19504195
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  19504246 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 19504195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 23452146 - 23452095
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  23452146 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 23452095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 14837608 - 14837667
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagt-ttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  14837608 ggttgcttgattatcacttgctccacacatcaagtattgttattgatgtgatttctcatc 14837667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 36561050 - 36560980
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| ||| |||||||||| |||||||||| |||||||||||||||| |||||  |||| ||||||    
T  36561050 ggttgcttgattattccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaacaa 36560980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 6258732 - 6258674
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||||| || |||||||||    
T  6258732 ggttgcctgattatcacttgctccacacatcaagtttgttattggtatgttttctcatc 6258674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 36558790 - 36558733
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||||||||| |||||    
T  36558790 ggttgcttgattatcccttgctccacacatcaag-ttattattggtgtgatttttcatc 36558733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 43623493 - 43623423
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||| ||| ||||  |||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  43623493 ggttgcctgattatctattgctccacacatcaagttagttattggtgtgatttttcatcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 34979504 - 34979447
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    |||||||| | ||| |||| ||||| ||||||||||||||||||||||| ||||||||    
T  34979504 ggttgctttattattccttactccacacatcaagtttgttattggtgtgttttctcat 34979447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 28459107 - 28459055
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| ||||||||| | |||||||||||||||    
T  28459107 ggttgcttgattatcacttgctccacacatcaagtgttttattggtgtgattt 28459055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 35215502 - 35215451
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  35215502 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 35215451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 42453822 - 42453873
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  42453822 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt 42453873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 45332089 - 45332018
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||| | ||||||||| |||| |||||||||| |||||||||||||||| |||||  |||| |||||||    
T  45332089 ggttgcttaattatcccttgttccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaacaaa 45332018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 6264047 - 6263992
Alignment:
Q  45 cttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||  |||| ||||||    
T  6264047 cttgctccacacatcaagtttgttattagtgtgttttctcatcgaattcacaacaa 6263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 15539430 - 15539396
Alignment:
Q  44 ccttgctccatacatcaagtttgttattggtgtga 78  Q
    |||||||||| ||||||||||||||||||||||||    
T  15539430 ccttgctccacacatcaagtttgttattggtgtga 15539396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 7462860 - 7462819
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttat 70  Q
    |||||||||| ||||| |||||||| ||||||||||||||||    
T  7462860 ggttgcttgattatcctttgctccacacatcaagtttgttat 7462819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 42923347 - 42923310
Alignment:
Q  45 cttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  42923347 cttgctccacacatcaagtttgttattggtgtgttttc 42923310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 5e-21; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 15073134 - 15073202
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  15073134 ttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 27827410 - 27827480
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  27827410 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattt-tcatcgaattcgcaacaa 27827480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 27106817 - 27106759
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  27106817 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatc 27106759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 27829721 - 27829790
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  27829721 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattt-tcatcgaattcgcaaca 27829790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 15068402 - 15068473
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||  |||||||||||    
T  15068402 ggttgcttgactatcccttgttccacacatcaagtttgttgttggtgtgatttttcatcgaattcgcaacaa 15068473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 183246 - 183298
Alignment:
Q  35 ttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  183246 ttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatc 183298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 15956373 - 15956444
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |||||  |||| ||||||    
T  15956373 ggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacaa 15956444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 28283131 - 28283061
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  28283131 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaacaa 28283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 2468048 - 2467996
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  2468048 ggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattt 2467996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 14419094 - 14419034
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||  |||| ||||||    
T  14419094 tatcacttgctccatacatcaagtttgttattggtgtgttttctcatcgaattcacaacaa 14419034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 14808181 - 14808233
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  14808181 ggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgattt 14808233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15185634 - 15185582
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  15185634 ggttgcttgactatcccttactccacacatcaagtttgttattgatgtgattt 15185582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 35872371 - 35872299
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||||||| || || ||||||||||||||||||||||| |||||||||  |||| |||||||    
T  35872371 ggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaaa 35872299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 18811133 - 18811203
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  18811133 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 18811203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 25952940 - 25953011
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||| ||||| ||||||||||||||||||||||| |||||||||  |||| ||||||    
T  25952940 ggttgcttgattatcactttctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaa 25953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 37214179 - 37214108
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||  |||| ||| ||||||||||||||||||||||||||||| |||||||||  |||| ||||||    
T  37214179 ggttgcttgcttatctcttactccatacatcaagtttgttattggtgtgttttctcatcaaattcacaacaa 37214108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 13858404 - 13858346
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| ||||||||||| ||||||||||||||| |||||    
T  13858404 ggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgatttttcatc 13858346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 15809643 - 15809711
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  15809643 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaaca 15809711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 33541323 - 33541273
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  33541323 ttgcttgattatcccttactccacacatcaagtttgttattggtgtgattt 33541273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 41383086 - 41383155
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||| ||| |||||  | |||||||||    
T  41383086 ttgcttgattatctcttgctccacacatcaagtttgttattggtgtggtttttcatcgaactcgcaacaa 41383155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 14477681 - 14477741
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| ||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  14477681 tatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 14477741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 32339735 - 32339805
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||||||||| ||| |||||||||| |||||||||||||||| |||||  ||||||||||||    
T  32339735 ggttgcttgattatcccttgccccacacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaacaaa 32339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 5372095 - 5372044
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||| ||||| |||||||| |||||||||||||||||| ||||||||    
T  5372095 gttgcttgaatatccattgctccacacatcaagtttgttattgatgtgattt 5372044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 43530540 - 43530610
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| ||||   |||||||||||    
T  43530540 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcattgaattcgcaacaa 43530610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 21482728 - 21482786
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||| ||||||||| ||||||||||| ||||||||||||||| |||||    
T  21482728 ggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatttttcatc 21482786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 24873108 - 24873051
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  24873108 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 24873051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 4424444 - 4424495
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| ||| |||| ||||||||||||||||||    
T  4424444 ggttgcttgattatcccttgctccacacaccaag-ttgttattggtgtgattt 4424495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 22684562 - 22684511
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||| ||| |||||||||||||| |||||||| ||||||||||||||||||    
T  22684562 ggttgcctgattatcccttgctccacacatcaag-ttgttattggtgtgattt 22684511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 36865959 - 36866007
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||| |||| ||||||||| |||||||||||||||||| ||||    
T  36865959 ggttgcttgattatcacttgctccacacatcaagtttgttattgatgtg 36866007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 43082398 - 43082449
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  43082398 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 43082449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 44721268 - 44721318
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 80  Q
    |||||||||| |||||||| ||||| |||||||||| |||||||||||||||    
T  44721268 ggttgcttgattatcccttactccacacatcaagtt-gttattggtgtgatt 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 18813307 - 18813376
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||| | | |||||||| |||||||||||||||| |||||  ||||||||||    
T  18813307 ggttgcttgattatctcttgctctacatatcaagtt-gttattggtgtgatttttcatcgaattcgcaaca 18813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 3874418 - 3874490
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||||  |||| ||||||||| |||||||||| |||||||||||||||| ||| |  |||| ||||||||    
T  3874418 ggttgcttggttatctcttgctccacacatcaagtt-gttattggtgtgatttttcaacgaattcacaacaaat 3874490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 27911508 - 27911549
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||| ||||||||| ||||||||||| |||||||||||||||    
T  27911508 tatcacttgctccacacatcaagttttttattggtgtgattt 27911549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 27957927 - 27957968
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||| ||||||||| ||||||||||| |||||||||||||||    
T  27957927 tatcacttgctccacacatcaagttttttattggtgtgattt 27957968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 50387 - 50458
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  50387 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 50458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 52386 - 52456
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  52386 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 183551 - 183494
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  183551 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttctcatc 183494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 26804885 - 26804956
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||  |||||||||||    
T  26804885 ggttgcttgactatcctttgctccacacatcaaatttgttattggtgtgatttctcatcaaattcgcaacaa 26804956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 44724952 - 44725023
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||  |||||||||||    
T  44724952 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttcccatcgaattcgcaacaa 44725023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 27306146 - 27306076
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||  ||||||||||    
T  27306146 ggttgcttgactatcccttgttccacacatcaagtttgttattggtgtgatctctcatcgaattcgcaaca 27306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 7092123 - 7092071
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7092123 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattt 7092071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 7094370 - 7094300
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  7094370 ggttgcttgactatgccttgctccacacatcaagtttgttattggtgtgattt-tcatcgaattcgcaacaa 7094300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 13099387 - 13099316
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  13099387 ggttgtttgacgatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 13099316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 36008 - 36065
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  36008 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttctcatc 36065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 44943 - 45012
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||  ||||||||||    
T  44943 ggttgcttgattatccattgctccacacatcaagtt-gttattggtgtgatttctcatcgaattcgcaaca 45012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 443972 - 444045
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga--tttctcatcttattcgcaacaa 100  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||  |||| ||||||    
T  443972 ggttgcttgactattccttgctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaacaa 444045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 9027103 - 9027034
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  9027103 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 42330916 - 42330846
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| ||||| |||||||| ||||||||||| ||||||| |||||||||||||  ||||||||||    
T  42330916 ggttgcttgattatccattgctccacacatcaagtttattattggcgtgatttctcatcgaattcgcaaca 42330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 28487932 - 28488000
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaac 98  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||    
T  28487932 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 31434961 - 31434892
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtga-tttctcatcttattcgcaaca 99  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||  ||||||||||    
T  31434961 ttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 11759506 - 11759577
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||||    
T  11759506 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaaa 11759577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 4295851 - 4295780
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||  || |||||||||| ||||||||||||||||||||||||||| |||||  ||| |||||||    
T  4295851 ggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgatttttcatcgaatttgcaacaa 4295780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 7471890 - 7471820
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| ||||   |||||||||||    
T  7471890 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcattgaattcgcaacaa 7471820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 38394365 - 38394435
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  38394365 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 38394435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 42223530 - 42223601
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||| ||| | |||  |||||||||||    
T  42223530 ggttgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttttatcgaattcgcaacaa 42223601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 1850360 - 1850429
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||  |||  ||||||||||    
T  1850360 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttcaaatcgaattcgcaaca 1850429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 9679434 - 9679492
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||| ||| |||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  9679434 ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatc 9679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 3878958 - 3879029
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaa 101  Q
    |||||||||| |||| ||||||||| ||||||||||  |||||| ||||||||||||||  ||||||||||||    
T  3878958 ggttgcttgattatctcttgctccacacatcaagtta-ttattgatgtgatttctcatcgaattcgcaacaaa 3879029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 24748964 - 24749012
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  24748964 ggttgtttgattatcccttgctccacacatcaagtttgttattggtgtg 24749012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 25542909 - 25542964
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  25542909 ttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 25542964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 20297741 - 20297811
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||| ||||||    
T  20297741 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaacaa 20297811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 21678436 - 21678507
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| ||| |||||||||| | |||||||||||||| |||||||||| |||||  |||| ||||||    
T  21678436 ggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgatttttcatcgaattcacaacaa 21678507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 28485944 - 28486014
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| | |||||| |||||||||||||||||| |||||  |||| ||||||    
T  28485944 ggttgcttgattatcccttgctccacatatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 28486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 1606758 - 1606815
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  1606758 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 1606815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 3036103 - 3036160
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| ||||||| || ||||||||||||||||||||||    
T  3036103 ggttgcttgattatctcttgctccaaacatcaaatt-gttattggtgtgatttctcatc 3036160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 20299839 - 20299896
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||    
T  20299839 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatc 20299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 20626412 - 20626481
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||| ||| |||||||||||||||| |||||  ||||||||||    
T  20626412 ggttgcttgattatctcttgctccacacatcaggtt-gttattggtgtgatttttcatcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 20630303 - 20630372
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||| ||| |||||||||||||||| |||||  ||||||||||    
T  20630303 ggttgcttgattatctcttgctccacacatcaggtt-gttattggtgtgatttttcatcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 20642722 - 20642791
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||| ||| |||||||||||||||| |||||  ||||||||||    
T  20642722 ggttgcttgattatctcttgctccacacatcaggtt-gttattggtgtgatttttcatcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 37412037 - 37411964
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga--tttctcatcttattcgcaacaa 100  Q
    |||||||||| ||| ||||| |||| ||||||||||||||||||||||||  |||||||||  |||| ||||||    
T  37412037 ggttgcttgattattccttgttccacacatcaagtttgttattggtgtgagttttctcatcaaattcacaacaa 37411964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 48458032 - 48458100
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  48458032 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 18345920 - 18345972
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||    
T  18345920 ggttgcttgactatcccttgctccacacatcaag-ttgttgttggtgtgttttc 18345972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 22251500 - 22251447
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    ||||| |||| |||||||||||| | ||||||||||||||||||||||| ||||    
T  22251500 ggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtgttttc 22251447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 1046827 - 1046776
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  1046827 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt 1046776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 7469931 - 7469861
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    ||||||||| ||||||| |||||| ||||||| || |||||||||||||||| |||||  |||||||||||||    
T  7469931 gttgcttgattatccct-gctccacacatcaaatt-gttattggtgtgatttttcatcgaattcgcaacaaat 7469861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 20137062 - 20137010
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||| || ||||||    
T  20137062 ggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattt 20137010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 38397018 - 38397069
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  38397018 ggttgctttattatcccttgctccacacatcaag-ttgttattggtgtgattt 38397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 40550208 - 40550259
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  40550208 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 40550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 40836653 - 40836602
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||| |||| |||||||||||||| |||||||| ||||||||||||||||||    
T  40836653 ggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 40836602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 1502883 - 1502833
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    ||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt 1502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 24465905 - 24465976
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| |||| |||| ||||||| ||| ||||||||||||||| |||||  |||| ||||||    
T  24465905 ggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgatttttcatcgaattcacaacaa 24465976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 40946709 - 40946759
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 80  Q
    |||||||||| |||||||||||||| |||||||| ||||||||| |||||||    
T  40946709 ggttgcttgattatcccttgctccacacatcaag-ttgttattgatgtgatt 40946759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 9681206 - 9681252
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    |||| |||| |||| ||||||||||||||||||||||| ||||||||    
T  9681206 tatcacttgttccacacatcaagtttgttattggtgtgttttctcat 9681252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 43253426 - 43253358
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| ||||||| || |||||||||||||||| |||||  ||||||||||    
T  43253426 ggttgcttgattatctcttgctccacacatcaaatt-gttattggtgtgattt-tcatcgaattcgcaaca 43253358  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 21990525 - 21990570
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggt 74  Q
    |||||| ||| |||||||||||||| ||||||||||| ||||||||    
T  21990525 ggttgcctgattatcccttgctccacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 39145901 - 39145856
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggt 74  Q
    |||||||||| |||| ||| ||||| ||||||||||||||||||||    
T  39145901 ggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

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Target: chr5 (Bit Score: 51; Significance: 8e-20; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 18511125 - 18511055
Alignment:
Q  30 gttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||  |||||||||||    
T  18511125 gttgcttgactatcccttgctccacacatcaagtttgttattgatgtgatttatcatcgaattcgcaacaa 18511055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 6745440 - 6745508
Alignment:
Q  32 tgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||    
T  6745440 tgcttgactatctcttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaacaa 6745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 36402240 - 36402169
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  36402240 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 36402169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 21289123 - 21289181
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  21289123 ggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgatttttcatc 21289181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 21948398 - 21948456
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  21948398 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgttttctcatc 21948456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 40221893 - 40221951
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  40221893 ggttgcttgactatcctttgctccacacatcaagtttgttattggtgtgatttttcatc 40221951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 6747673 - 6747744
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||| | ||||||||||||||||||||||| |||||||||  |||||||||||    
T  6747673 ggttgcttgattatctcttgctctacacatcaagtttgttattggtgtgttttctcatccaattcgcaacaa 6747744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 18469378 - 18469436
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||| |||||    
T  18469378 ggttgcttgattatcccttgctccacacatcaagtttgttattggtatgatttttcatc 18469436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 26098201 - 26098120
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga--tttctcatcttattcgcaacaaatgatgtg 108  Q
    |||||||||| ||| |||||||||| |||||||||||| |||||||||||  |||||||||  ||||||||||| |||||||    
T  26098201 ggttgcttgattattccttgctccacacatcaagtttgatattggtgtgagttttctcatcgaattcgcaacaattgatgtg 26098120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 38960041 - 38959972
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  38960041 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgcaaca 38959972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 39854851 - 39854921
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||| |||||||||||||||| | ||||||||| ||||||||||||||| |||||  ||||||||||    
T  39854851 ggttgcttaactatcccttgctccacatatcaagtttattattggtgtgatttttcatcgaattcgcaaca 39854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 18467055 - 18467124
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||  |||| ||||||    
T  18467055 ttgcttgattatcccttgctccacacatcaagtttgttattagtgtgatttttcatcgaattcacaacaa 18467124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 18597020 - 18597080
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||  ||| |||||||    
T  18597020 tatcacttgctccatacatcaagtttgttattggtgtgatttttcatcgaatttgcaacaa 18597080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 27910802 - 27910873
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||| |||| |||||||||||||| ||||||| ||||||||||||||||||| |||||  |||| ||||||    
T  27910802 ggttgattgattatcccttgctccacacatcaaatttgttattggtgtgatttttcatcgaattcacaacaa 27910873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 34476962 - 34476893
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  34476962 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaacaa 34476893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 34479327 - 34479258
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  |||||||||||    
T  34479327 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcaaattcgcaacaa 34479258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 39798399 - 39798469
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||  |||||||||||||||||| |||||  |||||||||||    
T  39798399 ggttgcttgattatcccttgctccacacatcaa-attgttattggtgtgatttttcatcgaattcgcaacaa 39798469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 41585650 - 41585579
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||| ||| ||||||||||||||||||||||||||| |||||  |||| ||||||    
T  41585650 ggttgcttgattatctcttgccccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 41585579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 16092115 - 16092057
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||| | |||||||||    
T  16092115 ggttgcttgactatccattgctccacatatcaagtttgttattggtgcgttttctcatc 16092057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 27912905 - 27912963
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||| ||||| |||||    
T  27912905 ggttgcttgattatcccttactccacacatcaagtttgttattggtgggatttttcatc 27912963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 31179282 - 31179225
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  31179282 ggttgcttaattatcccttgctccatacatcaag-ttgttattggtgtgatttttcatc 31179225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 34530629 - 34530571
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||||| |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  34530629 ggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtgatttttcatc 34530571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 2818236 - 2818199
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2818236 tatcccttgctccatacatcaagtttgttattggtgtg 2818199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 2724257 - 2724309
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||  | |||||||||||||||||||||||||||    
T  2724257 ggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgattt 2724309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 4410390 - 4410441
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  4410390 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 4410441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 10587184 - 10587235
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  10587184 ggttgcttgattatcc-ttgctccacacatcaagtttgttattggtgtgattt 10587235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 17818405 - 17818357
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  17818405 ggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 17818357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 21684360 - 21684294
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  21684360 ttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaaca 21684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 25921383 - 25921333
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 80  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  25921383 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 31465903 - 31465832
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | ||| ||||| |||| ||||||| ||||||||||||||||||| |||||  |||||||||||    
T  31465903 ggttgcttaattattccttgttccacacatcaaatttgttattggtgtgatttttcatcaaattcgcaacaa 31465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 658273 - 658204
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||| ||| ||| |||||||||| ||||||| ||||||||||||||||||| |||||  ||||||||||    
T  658273 ggttgcctgattattccttgctccacacatcaaatttgttattggtgtgattt-tcatcgaattcgcaaca 658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 3373046 - 3372989
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatc 87  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||    
T  3373046 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 3372989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 16776526 - 16776576
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||| ||| ||| |||||||||| |||||||||||||||||||||||||||    
T  16776526 ttgcctgattattccttgctccacacatcaagtttgttattggtgtgattt 16776576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 38882457 - 38882525
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||    
T  38882457 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcgcaaca 38882525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 2175270 - 2175318
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga 78  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  2175270 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 2175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 12555828 - 12555779
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtga 78  Q
    |||||||||| ||| |||||||||| ||||||| ||||||||||||||||    
T  12555828 ggttgcttgattattccttgctccacacatcaaatttgttattggtgtga 12555779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 20505741 - 20505700
Alignment:
Q  45 cttgctccatacatcaagtttgttattggtgtgatttctcat 86  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  20505741 cttgctccacacatcaagtttgttattggtgtgttttctcat 20505700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 25904469 - 25904537
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||||||||||||| ||| ||||||| ||| ||| ||||||| |||||||||  |||||||||||    
T  25904469 ttgcttgactatcccttgcaccacacatcaaatttatta-tggtgtgttttctcatcgaattcgcaacaa 25904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 6756858 - 6756926
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagttt-gttattggtgtgatttctcatcttattcgcaac 98  Q
    |||| ||| |||| ||||||||| ||||||||||| |||||||||||| |||||||||  |||||||||    
T  6756858 ttgcctgattatcacttgctccacacatcaagttttgttattggtgtgttttctcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 10750069 - 10750120
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  10750069 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 10750120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 10757545 - 10757596
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  10757545 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 10757596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15354483 - 15354432
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  15354483 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 15354432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15356759 - 15356708
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  15356759 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 15356708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 23665415 - 23665466
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  23665415 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 23665466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 23741766 - 23741715
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  23741766 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 23741715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 23793172 - 23793121
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  23793172 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 23793121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 24127232 - 24127292
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||||||| |||| |||||||||||| ||||||||| |||||  |||| ||||||    
T  24127232 tatcccttgctccacacattaagtttgttatttgtgtgatttttcatcgaattcacaacaa 24127292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 37705697 - 37705649
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtg 77  Q
    |||||||||  ||| |||||||||| |||||||||||||||||||||||    
T  37705697 ggttgcttggttattccttgctccacacatcaagtttgttattggtgtg 37705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 31543103 - 31543153
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatt 80  Q
    |||||||||| || ||||||||||| |||||||| |||||||||||||||||    
T  31543103 ggttgcttgattaacccttgctccacacatcaag-ttgttattggtgtgatt 31543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 36208937 - 36209008
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||| ||||||| | ||||||||||| |||||| |||||||| |||||  |||| ||||||    
T  36208937 ggttgcttgattatcacttgctctacacatcaagtttattattgatgtgatttttcatcgaattcacaacaa 36209008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 1189518 - 1189469
Alignment:
Q  33 gcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    |||||| ||| |||||||||| |||||||||||| |||||||||| ||||    
T  1189518 gcttgattattccttgctccacacatcaagtttgatattggtgtgttttc 1189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 35969 - 36037
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaa 97  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||  ||||||||    
T  35969 ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgcaa 36037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 404 - 459
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctca 85  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  404 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttctca 459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 69202 - 69150
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  69202 ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattt 69150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 79572 - 79631
Alignment:
Q  40 tatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||   ||||||||||    
T  79572 tatcccttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaaca 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 80251 - 80306
Alignment:
Q  45 cttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||    
T  80251 cttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaacaa 80306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 3257 - 3308
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  3257 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 3308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 14299 - 14248
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  14299 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 14248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 29550 - 29616
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaaca 99  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||||||    
T  29550 ttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt-tcatcgaattcgcaaca 29616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 6577 - 6647
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||    
T  6577 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 12784 - 12714
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaa 100  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||| |||| |||||  |||| ||||||    
T  12784 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcatttttcatcgaattcacaacaa 12714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 24770 - 24842
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||| | |||||||||||||| |||||||| |||||||||||||||||| || ||  |||| ||||||||    
T  24770 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaaat 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 22495 - 22546
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||| | |||||||||||||| |||||||| ||||||||||||||||||    
T  22495 ggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattt 22546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 1362 - 1311
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattt 81  Q
    |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||    
T  1362 ggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt 1311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 85603 - 85671
Alignment:
Q  29 ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaa 97  Q
    ||||| |||| |||| ||||||||| |||| ||| |||||||||||||||||| |||||  ||||||||    
T  85603 ggttgtttgattatctcttgctccacacattaagattgttattggtgtgatttttcatcgaattcgcaa 85671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 4369 - 4420
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttc 82  Q
    |||||||| |||||||| ||||| |||||||||||||||||| |||| ||||    
T  4369 ttgcttgattatcccttactccacacatcaagtttgttattgatgtgttttc 4420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 41391 - 41322
Alignment:
Q  31 ttgcttgactatcccttgctccatacatcaagtttgttattggtgtgatttctcatcttattcgcaacaaat 102  Q
    |||||||| |||| ||||||||| |||||||||| |||||||||||||||| |||||  |||| ||||||||    
T  41391 ttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattt-tcatcgaattcacaacaaat 41322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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