View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16112_high_48 (Length: 264)
Name: NF16112_high_48
Description: NF16112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16112_high_48 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 34096781 - 34097013
Alignment:
| Q |
15 |
aatatggtaacatagctagactaataataattatctgtacactaaaacatacttatgttacataataggagacagcccgagttaattctttgttgttgct |
114 |
Q |
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| T |
34096781 |
aatatggtaacatagctagactaattacaattatctgtacactaaaacatacttatgttacataataggagacagcccgagttaattctttgttgttgct |
34096880 |
T |
|
| Q |
115 |
tccatctctcagtcagaaaatcttcattgcttttgactttgagatactcatctatgtcaaatctcaatccttttgatttagctgagaatgactcgtctgg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34096881 |
tccatctctcagtcagaaaatcttcattgcttttgactttgagatactcatctatgtcaaatctcaatccttttgatttagctgagaatgactcgtctgg |
34096980 |
T |
|
| Q |
215 |
attgctataaactttgccaagcttactgaatac |
247 |
Q |
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||||||||||||||| ||||||||||||||||| |
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| T |
34096981 |
attgctataaacttttccaagcttactgaatac |
34097013 |
T |
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