View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16112_high_6 (Length: 552)
Name: NF16112_high_6
Description: NF16112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16112_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 505; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 10 - 530
Target Start/End: Original strand, 36381806 - 36382326
Alignment:
| Q |
10 |
attattcttgggaaaatgattgttcaaagaaaaagagaagatgttttttgaagtggacttaattttcataatggtcatgacttgtttcactctcttggta |
109 |
Q |
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| T |
36381806 |
attattcttgggaaaatgattgttcaaagaaaaagagatgatgttttttgaagtggacttaattttcataatggtcatgactggtttcactctcttggta |
36381905 |
T |
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| Q |
110 |
ttgttatagttccttttcactatcattataccattttgccactattttggactgcagggtttcaatgccactcttactgaaccagtggatccttttggaa |
209 |
Q |
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| T |
36381906 |
ttgttatagttccttttcactatcattataccattttgccactattttggactgcagggtttcaatgccactcttactgaaccagtggatccttttggaa |
36382005 |
T |
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| Q |
210 |
ggggtggtcagattaaagaactagaactaaaagtgcacccagatatgaaggaacctttaaagaagctatctgatgacccaaagacaacagtggttgttct |
309 |
Q |
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| T |
36382006 |
ggggtggtcagattaaagaactagaactaaaagtgcacccagatatgaaggaacctttaaagaagctatctgatgacccaaagacaacagtggttgttct |
36382105 |
T |
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| Q |
310 |
gagtgggagtggtagagctgtcctagacaaagtattctttagaaaagtttatttgtttttcaatgttcagcaacatttgcttttgtaagaaataacaact |
409 |
Q |
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| T |
36382106 |
gagtgggagtggtagagctgtcctagacaaagtattctttagaaaagtttatttgtttttcaatgttcagcaacatttgcttttgtaataaataacaact |
36382205 |
T |
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| Q |
410 |
attttatgcagaactttggtgaatacaatatgtggttggcagcagaaaatgggatgtttttgcgacttacttcaagtgaatggatgacaaccatgcctga |
509 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36382206 |
atttcatgcagaactttggtgaatacaatatgtggttggcagcagaaaatgggatgtttttgcgacttacttcaagtgaatggatgacaaccatgcctga |
36382305 |
T |
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| Q |
510 |
aaatttaaacatggattgggt |
530 |
Q |
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| T |
36382306 |
aaatttaaacatggattgggt |
36382326 |
T |
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