View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16112_low_3 (Length: 750)

Name: NF16112_low_3
Description: NF16112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16112_low_3
NF16112_low_3
[»] chr2 (57 HSPs)
chr2 (19-735)||(17348875-17349585)
chr2 (492-735)||(15339223-15339475)
chr2 (493-732)||(29719097-29719344)
chr2 (492-735)||(26603223-26603464)
chr2 (506-735)||(27908981-27909219)
chr2 (508-723)||(30411679-30411892)
chr2 (492-723)||(25618542-25618780)
chr2 (492-704)||(31804792-31805014)
chr2 (506-735)||(17743339-17743576)
chr2 (542-724)||(25920302-25920479)
chr2 (499-732)||(32085455-32085695)
chr2 (502-732)||(13776334-13776573)
chr2 (492-619)||(25888212-25888334)
chr2 (499-729)||(45621751-45621988)
chr2 (501-605)||(12953294-12953399)
chr2 (506-724)||(28925521-28925747)
chr2 (519-726)||(29142973-29143177)
chr2 (501-604)||(5777211-5777314)
chr2 (510-600)||(25939161-25939251)
chr2 (501-605)||(20174635-20174740)
chr2 (506-726)||(25196010-25196238)
chr2 (501-604)||(5792823-5792926)
chr2 (506-723)||(25530445-25530660)
chr2 (506-735)||(17635637-17635875)
chr2 (499-604)||(23011764-23011869)
chr2 (527-726)||(17197888-17198084)
chr2 (636-735)||(25887766-25887864)
chr2 (506-735)||(17675491-17675730)
chr2 (503-604)||(8447051-8447152)
chr2 (501-604)||(45553124-45553228)
chr2 (492-696)||(11382654-11382867)
chr2 (503-604)||(25070124-25070225)
chr2 (503-570)||(12557744-12557811)
chr2 (503-605)||(19200135-19200237)
chr2 (636-723)||(23933420-23933505)
chr2 (503-604)||(8503071-8503173)
chr2 (527-726)||(24090810-24091005)
chr2 (527-723)||(25535294-25535486)
chr2 (499-604)||(17889929-17890034)
chr2 (502-605)||(25885460-25885563)
chr2 (527-615)||(26667337-26667428)
chr2 (501-604)||(28770444-28770548)
chr2 (507-578)||(32440024-32440095)
chr2 (530-606)||(27418389-27418466)
chr2 (498-605)||(9774335-9774440)
chr2 (668-726)||(26667464-26667522)
chr2 (651-716)||(12953225-12953290)
chr2 (503-560)||(27869795-27869852)
chr2 (510-562)||(25936925-25936977)
chr2 (636-723)||(45553268-45553352)
chr2 (635-729)||(17890075-17890167)
chr2 (546-604)||(21078627-21078685)
chr2 (544-621)||(28606164-28606239)
chr2 (503-555)||(18540028-18540080)
chr2 (492-555)||(20173348-20173411)
chr2 (503-560)||(18553952-18554009)
chr2 (510-551)||(25933111-25933152)
[»] chr7 (104 HSPs)
chr7 (492-723)||(2563803-2564043)
chr7 (492-735)||(5108551-5108801)
chr7 (492-724)||(6042446-6042676)
chr7 (492-712)||(3329542-3329772)
chr7 (509-735)||(8978868-8979103)
chr7 (499-735)||(16365697-16365942)
chr7 (498-704)||(17077119-17077321)
chr7 (506-733)||(13418533-13418756)
chr7 (499-693)||(7318265-7318468)
chr7 (492-605)||(9731627-9731741)
chr7 (530-726)||(11803103-11803296)
chr7 (500-724)||(10586897-10587130)
chr7 (527-726)||(16058904-16059101)
chr7 (501-604)||(14195974-14196077)
chr7 (530-735)||(39273038-39273251)
chr7 (506-734)||(8053926-8054158)
chr7 (506-720)||(1848105-1848325)
chr7 (501-732)||(3734590-3734829)
chr7 (492-735)||(4785822-4786077)
chr7 (499-723)||(18662433-18662664)
chr7 (506-723)||(18368853-18369080)
chr7 (499-604)||(9864327-9864433)
chr7 (506-722)||(20582258-20582479)
chr7 (499-723)||(9130898-9131135)
chr7 (509-605)||(13759860-13759957)
chr7 (499-723)||(17153028-17153261)
chr7 (510-735)||(7492130-7492358)
chr7 (506-622)||(8054471-8054589)
chr7 (499-627)||(12329674-12329802)
chr7 (500-735)||(15869588-15869831)
chr7 (492-591)||(23099966-23100066)
chr7 (499-718)||(31492922-31493145)
chr7 (492-597)||(2350755-2350861)
chr7 (499-605)||(17203016-17203122)
chr7 (499-637)||(1584537-1584673)
chr7 (501-605)||(6013587-6013692)
chr7 (636-729)||(7397280-7397372)
chr7 (500-604)||(10584487-10584592)
chr7 (636-734)||(8877559-8877657)
chr7 (492-605)||(4818822-4818935)
chr7 (500-605)||(11221164-11221270)
chr7 (502-629)||(12181603-12181730)
chr7 (501-732)||(9574401-9574639)
chr7 (500-604)||(21230305-21230410)
chr7 (494-605)||(16297820-16297932)
chr7 (499-605)||(4986547-4986654)
chr7 (499-605)||(4990645-4990752)
chr7 (502-604)||(9500439-9500542)
chr7 (499-604)||(5530013-5530119)
chr7 (503-604)||(10937598-10937700)
chr7 (499-604)||(16306686-16306792)
chr7 (503-604)||(18449238-18449340)
chr7 (503-604)||(18466001-18466103)
chr7 (501-732)||(19153292-19153530)
chr7 (501-732)||(20752691-20752929)
chr7 (499-604)||(6005829-6005934)
chr7 (500-577)||(7397189-7397266)
chr7 (502-604)||(22339312-22339418)
chr7 (503-562)||(26134791-26134850)
chr7 (499-604)||(4579090-4579195)
chr7 (499-588)||(14755147-14755237)
chr7 (500-604)||(9245174-9245279)
chr7 (524-726)||(17191085-17191284)
chr7 (503-560)||(23093306-23093363)
chr7 (636-732)||(140255-140349)
chr7 (503-558)||(5047434-5047489)
chr7 (527-726)||(13277523-13277719)
chr7 (516-562)||(2953582-2953628)
chr7 (489-562)||(5797493-5797567)
chr7 (499-604)||(18495365-18495471)
chr7 (499-607)||(1587673-1587782)
chr7 (527-726)||(4449000-4449195)
chr7 (503-560)||(15303666-15303723)
chr7 (636-704)||(16297727-16297794)
chr7 (503-570)||(4258921-4258988)
chr7 (507-562)||(9866584-9866639)
chr7 (499-605)||(10648570-10648677)
chr7 (635-722)||(13289294-13289381)
chr7 (503-604)||(9916562-9916664)
chr7 (503-604)||(9924474-9924576)
chr7 (499-604)||(21912481-21912587)
chr7 (330-432)||(27470212-27470314)
chr7 (503-604)||(2453729-2453830)
chr7 (653-735)||(4818995-4819078)
chr7 (500-604)||(9261197-9261302)
chr7 (640-732)||(17829712-17829801)
chr7 (507-571)||(18661590-18661655)
chr7 (518-605)||(3191059-3191147)
chr7 (513-588)||(8313412-8313488)
chr7 (636-735)||(9731490-9731587)
chr7 (500-605)||(1872778-1872884)
chr7 (510-560)||(4901921-4901971)
chr7 (507-560)||(9890183-9890237)
chr7 (503-604)||(12391181-12391283)
chr7 (636-732)||(8313259-8313352)
chr7 (636-669)||(14195899-14195932)
chr7 (525-609)||(9078185-9078269)
chr7 (640-719)||(8293920-8293997)
chr7 (530-604)||(18467474-18467549)
chr7 (636-703)||(1587821-1587884)
chr7 (492-542)||(1814100-1814150)
chr7 (636-669)||(10648717-10648750)
chr7 (503-556)||(20174568-20174621)
chr7 (512-560)||(21227184-21227233)
[»] chr1 (67 HSPs)
chr1 (492-735)||(17359147-17359398)
chr1 (492-735)||(21449074-21449314)
chr1 (506-735)||(12208600-12208838)
chr1 (500-735)||(9401502-9401742)
chr1 (506-720)||(29242518-29242728)
chr1 (508-735)||(17610118-17610354)
chr1 (509-735)||(31235911-31236145)
chr1 (506-726)||(18736123-18736340)
chr1 (506-723)||(15543841-15544066)
chr1 (506-712)||(25405516-25405730)
chr1 (510-712)||(16179010-16179220)
chr1 (506-726)||(21987865-21988082)
chr1 (524-726)||(16916817-16917016)
chr1 (502-602)||(21847629-21847729)
chr1 (500-732)||(23037876-23038117)
chr1 (492-604)||(13345337-13345450)
chr1 (499-720)||(15813032-15813261)
chr1 (499-604)||(3591654-3591760)
chr1 (529-724)||(21666482-21666685)
chr1 (502-721)||(22664201-22664429)
chr1 (506-699)||(14779564-14779766)
chr1 (527-728)||(14781735-14781932)
chr1 (503-604)||(26540892-26540993)
chr1 (489-605)||(15813524-15813642)
chr1 (499-604)||(17837509-17837615)
chr1 (506-726)||(18825655-18825871)
chr1 (502-622)||(24281272-24281391)
chr1 (506-724)||(727466-727681)
chr1 (499-605)||(9787879-9787986)
chr1 (499-605)||(16787726-16787833)
chr1 (506-723)||(21334592-21334819)
chr1 (499-604)||(24306307-24306412)
chr1 (502-629)||(51473854-51473978)
chr1 (501-570)||(17121515-17121584)
chr1 (636-728)||(22623029-22623120)
chr1 (500-602)||(12012803-12012906)
chr1 (499-732)||(33190669-33190909)
chr1 (640-726)||(16069433-16069518)
chr1 (501-605)||(26648971-26649075)
chr1 (499-603)||(27117720-27117825)
chr1 (501-605)||(16359865-16359969)
chr1 (527-726)||(23179817-23180012)
chr1 (636-732)||(28008244-28008338)
chr1 (500-605)||(22620255-22620361)
chr1 (499-604)||(24267783-24267889)
chr1 (636-720)||(17121378-17121460)
chr1 (636-723)||(18100888-18100973)
chr1 (630-732)||(15807886-15807986)
chr1 (501-605)||(147625-147730)
chr1 (638-732)||(21973071-21973164)
chr1 (636-724)||(32382882-32382968)
chr1 (533-604)||(24306957-24307028)
chr1 (502-556)||(32383047-32383102)
chr1 (508-601)||(22622892-22622985)
chr1 (652-714)||(25403974-25404036)
chr1 (527-726)||(24053999-24054194)
chr1 (508-576)||(10064600-10064668)
chr1 (636-723)||(9787753-9787839)
chr1 (639-710)||(18529079-18529149)
chr1 (499-585)||(44795361-44795447)
chr1 (636-732)||(12012680-12012773)
chr1 (687-735)||(13345200-13345248)
chr1 (635-699)||(18830607-18830670)
chr1 (502-604)||(34480964-34481067)
chr1 (636-685)||(21847772-21847820)
chr1 (521-605)||(24214558-24214643)
chr1 (503-604)||(25958105-25958206)
[»] chr3 (68 HSPs)
chr3 (492-723)||(21301903-21302144)
chr3 (492-735)||(16245593-16245843)
chr3 (509-741)||(17438287-17438527)
chr3 (495-732)||(21303220-21303465)
chr3 (492-723)||(41508352-41508591)
chr3 (499-722)||(12805766-12805997)
chr3 (502-696)||(3116321-3116522)
chr3 (506-726)||(8770019-8770235)
chr3 (499-696)||(20429702-20429908)
chr3 (506-724)||(4650231-4650451)
chr3 (501-604)||(21825870-21825973)
chr3 (502-732)||(5508331-5508568)
chr3 (527-720)||(16229831-16230021)
chr3 (506-724)||(8765117-8765331)
chr3 (508-657)||(22349410-22349556)
chr3 (527-724)||(12754796-12754992)
chr3 (491-735)||(2167481-2167731)
chr3 (501-724)||(21325334-21325566)
chr3 (507-722)||(19908307-19908531)
chr3 (639-726)||(932884-932970)
chr3 (635-726)||(8170008-8170099)
chr3 (527-728)||(19167431-19167626)
chr3 (499-604)||(31286017-31286121)
chr3 (502-605)||(10744897-10745001)
chr3 (501-604)||(10917912-10918016)
chr3 (635-726)||(8882994-8883085)
chr3 (499-605)||(12411143-12411250)
chr3 (502-605)||(18736672-18736775)
chr3 (499-604)||(6289895-6290001)
chr3 (498-622)||(19171816-19171942)
chr3 (639-716)||(27413778-27413855)
chr3 (501-604)||(821515-821619)
chr3 (529-715)||(19925504-19925700)
chr3 (490-637)||(7478304-7478446)
chr3 (503-600)||(28728940-28729038)
chr3 (501-605)||(8319034-8319138)
chr3 (494-562)||(18458467-18458536)
chr3 (635-724)||(19909846-19909935)
chr3 (501-604)||(8143609-8143711)
chr3 (637-728)||(20023422-20023512)
chr3 (503-604)||(12759383-12759485)
chr3 (527-713)||(19576105-19576288)
chr3 (500-578)||(13908253-13908331)
chr3 (507-562)||(21074581-21074636)
chr3 (499-604)||(7147980-7148085)
chr3 (667-735)||(7494977-7495045)
chr3 (530-598)||(8445846-8445913)
chr3 (549-636)||(7495065-7495151)
chr3 (527-605)||(8889152-8889231)
chr3 (665-732)||(19171732-19171799)
chr3 (531-604)||(8557130-8557204)
chr3 (502-562)||(11518004-11518065)
chr3 (503-576)||(21019625-21019698)
chr3 (507-564)||(23056212-23056269)
chr3 (509-562)||(27542958-27543011)
chr3 (667-735)||(7478217-7478285)
chr3 (510-597)||(10923150-10923238)
chr3 (503-559)||(20339810-20339866)
chr3 (503-562)||(25756671-25756731)
chr3 (503-554)||(12752203-12752254)
chr3 (636-729)||(17155931-17156021)
chr3 (636-735)||(12411289-12411384)
chr3 (636-699)||(10745040-10745101)
chr3 (499-534)||(22245342-22245377)
chr3 (640-714)||(18736556-18736628)
chr3 (698-732)||(21380443-21380477)
chr3 (636-697)||(21825770-21825829)
chr3 (640-704)||(2723729-2723790)
[»] chr6 (71 HSPs)
chr6 (499-721)||(27737565-27737796)
chr6 (492-681)||(23143707-23143905)
chr6 (509-735)||(23844327-23844562)
chr6 (492-744)||(12183185-12183445)
chr6 (499-723)||(28933535-28933767)
chr6 (523-691)||(22410234-22410410)
chr6 (499-604)||(9726014-9726120)
chr6 (506-724)||(17826969-17827192)
chr6 (492-605)||(21672435-21672549)
chr6 (499-607)||(15466362-15466470)
chr6 (492-720)||(5624625-5624862)
chr6 (492-735)||(14079320-14079558)
chr6 (492-605)||(21679851-21679965)
chr6 (508-701)||(9516786-9516988)
chr6 (512-732)||(23645633-23645861)
chr6 (495-598)||(17729140-17729244)
chr6 (508-735)||(25781796-25782014)
chr6 (489-731)||(11176932-11177183)
chr6 (499-601)||(21907424-21907527)
chr6 (509-724)||(27124368-27124589)
chr6 (522-723)||(23231859-23232067)
chr6 (499-603)||(25927305-25927410)
chr6 (636-735)||(20144984-20145083)
chr6 (636-735)||(22187756-22187855)
chr6 (494-605)||(4339722-4339834)
chr6 (527-728)||(24657338-24657534)
chr6 (499-607)||(8039137-8039238)
chr6 (636-726)||(20005789-20005879)
chr6 (499-606)||(21688794-21688902)
chr6 (634-726)||(11136032-11136125)
chr6 (642-735)||(14637012-14637104)
chr6 (512-604)||(17299832-17299925)
chr6 (499-605)||(8241269-8241374)
chr6 (492-629)||(18075365-18075502)
chr6 (499-609)||(17883780-17883891)
chr6 (499-605)||(22567832-22567939)
chr6 (506-726)||(21841571-21841788)
chr6 (499-603)||(7542962-7543067)
chr6 (634-735)||(24475192-24475292)
chr6 (508-585)||(20005899-20005977)
chr6 (643-704)||(17382214-17382274)
chr6 (512-604)||(22566163-22566256)
chr6 (503-595)||(28589440-28589533)
chr6 (501-588)||(19244579-19244667)
chr6 (514-570)||(34478532-34478588)
chr6 (502-596)||(2586716-2586810)
chr6 (503-607)||(9898956-9899062)
chr6 (527-728)||(23009277-23009473)
chr6 (527-728)||(23778891-23779087)
chr6 (637-713)||(22813605-22813680)
chr6 (503-570)||(20722212-20722278)
chr6 (503-557)||(21932100-21932155)
chr6 (527-719)||(22412940-22413128)
chr6 (495-559)||(20145106-20145171)
chr6 (495-559)||(22187668-22187733)
chr6 (636-729)||(22566030-22566122)
chr6 (502-601)||(24251511-24251611)
chr6 (645-720)||(1635110-1635183)
chr6 (640-723)||(9838499-9838580)
chr6 (503-578)||(26215414-26215488)
chr6 (508-578)||(9385956-9386026)
chr6 (547-605)||(24252229-24252287)
chr6 (503-604)||(28586031-28586133)
chr6 (636-722)||(15466509-15466592)
chr6 (640-724)||(21907577-21907660)
chr6 (531-605)||(9838380-9838455)
chr6 (636-701)||(8241414-8241476)
chr6 (640-670)||(24252156-24252186)
chr6 (639-732)||(4339877-4339967)
chr6 (533-562)||(9386070-9386099)
chr6 (636-669)||(25927232-25927265)
[»] chr4 (63 HSPs)
chr4 (508-735)||(19492574-19492798)
chr4 (507-723)||(13908854-13909079)
chr4 (492-726)||(19562046-19562292)
chr4 (492-702)||(13128768-13128988)
chr4 (501-721)||(13692557-13692774)
chr4 (506-710)||(17216816-17217031)
chr4 (509-735)||(7582299-7582534)
chr4 (499-723)||(25121101-25121332)
chr4 (493-735)||(17336997-17337247)
chr4 (501-723)||(14648889-14649119)
chr4 (499-711)||(17671994-17672214)
chr4 (499-604)||(19882632-19882738)
chr4 (499-605)||(11490524-11490631)
chr4 (508-735)||(15164768-15165003)
chr4 (506-680)||(16730317-16730499)
chr4 (492-735)||(40227762-40228011)
chr4 (492-602)||(13992879-13992990)
chr4 (492-669)||(12578193-12578380)
chr4 (507-724)||(17709757-17709979)
chr4 (508-605)||(26115904-26116001)
chr4 (499-606)||(9052666-9052773)
chr4 (499-605)||(21323875-21323982)
chr4 (527-724)||(17026217-17026412)
chr4 (507-604)||(20315000-20315098)
chr4 (527-726)||(25097854-25098049)
chr4 (502-669)||(5679200-5679377)
chr4 (504-693)||(19929579-19929777)
chr4 (499-696)||(20829640-20829845)
chr4 (501-605)||(19092289-19092394)
chr4 (504-595)||(22175972-22176064)
chr4 (643-735)||(24639324-24639415)
chr4 (509-590)||(19374828-19374909)
chr4 (499-704)||(17951190-17951403)
chr4 (502-732)||(8969596-8969825)
chr4 (492-605)||(19636586-19636699)
chr4 (499-597)||(9737512-9737616)
chr4 (499-702)||(17955044-17955255)
chr4 (509-604)||(11521192-11521288)
chr4 (502-605)||(11933414-11933517)
chr4 (499-603)||(3774817-3774923)
chr4 (503-570)||(22218636-22218703)
chr4 (527-726)||(25094587-25094782)
chr4 (500-588)||(15047121-15047210)
chr4 (500-588)||(15107214-15107303)
chr4 (503-576)||(19900576-19900649)
chr4 (650-725)||(12406575-12406650)
chr4 (488-732)||(22357397-22357653)
chr4 (492-590)||(24639469-24639567)
chr4 (504-562)||(25643460-25643518)
chr4 (503-576)||(10107007-10107080)
chr4 (512-604)||(22526369-22526462)
chr4 (682-734)||(11935241-11935293)
chr4 (636-723)||(26115780-26115865)
chr4 (500-604)||(11700571-11700675)
chr4 (503-576)||(22345017-22345090)
chr4 (499-554)||(12318425-12318481)
chr4 (636-679)||(9264923-9264966)
chr4 (503-550)||(15050138-15050185)
chr4 (503-550)||(15104239-15104286)
chr4 (500-604)||(12839781-12839886)
chr4 (492-538)||(11935176-11935221)
chr4 (500-604)||(23080334-23080439)
chr4 (509-562)||(40215361-40215414)
[»] chr8 (47 HSPs)
chr8 (492-724)||(13314865-13315105)
chr8 (492-735)||(24114146-24114396)
chr8 (494-735)||(24269585-24269833)
chr8 (530-735)||(27659468-27659670)
chr8 (509-723)||(17101779-17101990)
chr8 (490-715)||(29382243-29382477)
chr8 (499-704)||(14528141-14528354)
chr8 (499-604)||(17976611-17976717)
chr8 (509-735)||(18448404-18448639)
chr8 (502-700)||(13697857-13698055)
chr8 (499-604)||(30122156-30122261)
chr8 (490-605)||(30806492-30806613)
chr8 (501-723)||(34497109-34497340)
chr8 (492-735)||(24110532-24110769)
chr8 (503-603)||(31288354-31288454)
chr8 (501-604)||(24644832-24644935)
chr8 (513-724)||(44010897-44011116)
chr8 (512-605)||(2637603-2637697)
chr8 (499-604)||(5850933-5851039)
chr8 (499-723)||(25182302-25182535)
chr8 (506-701)||(17509246-17509447)
chr8 (499-605)||(19786723-19786830)
chr8 (499-696)||(6884950-6885155)
chr8 (502-603)||(15238794-15238896)
chr8 (546-725)||(16403952-16404127)
chr8 (508-605)||(25226137-25226235)
chr8 (504-604)||(24904630-24904731)
chr8 (529-741)||(21314645-21314865)
chr8 (651-735)||(26394562-26394644)
chr8 (545-713)||(14626069-14626244)
chr8 (527-726)||(19264062-19264259)
chr8 (499-634)||(28276730-28276864)
chr8 (635-704)||(18569192-18569260)
chr8 (503-604)||(14075590-14075692)
chr8 (503-576)||(24119798-24119871)
chr8 (501-604)||(5052923-5053026)
chr8 (506-561)||(17972171-17972225)
chr8 (635-722)||(23893089-23893175)
chr8 (512-562)||(30783784-30783835)
chr8 (503-560)||(26008019-26008077)
chr8 (636-732)||(7983720-7983813)
chr8 (503-576)||(12268193-12268266)
chr8 (637-723)||(9642018-9642102)
chr8 (500-542)||(30235370-30235412)
chr8 (647-678)||(5052844-5052875)
chr8 (492-538)||(14628361-14628407)
chr8 (636-669)||(19786870-19786903)
[»] scaffold0035 (1 HSPs)
scaffold0035 (505-715)||(69911-70129)
[»] chr5 (60 HSPs)
chr5 (508-723)||(24245418-24245642)
chr5 (502-607)||(24266953-24267058)
chr5 (502-607)||(24343584-24343689)
chr5 (493-622)||(25550487-25550617)
chr5 (506-723)||(15375769-15375982)
chr5 (508-735)||(17431884-17432119)
chr5 (499-607)||(18208247-18208355)
chr5 (506-722)||(20315305-20315529)
chr5 (527-732)||(20563957-20564160)
chr5 (499-696)||(18937740-18937945)
chr5 (499-605)||(36175126-36175232)
chr5 (509-694)||(34487640-34487832)
chr5 (527-728)||(16523672-16523870)
chr5 (506-721)||(24140442-24140658)
chr5 (506-671)||(19004153-19004326)
chr5 (499-605)||(17171553-17171660)
chr5 (635-735)||(20744532-20744631)
chr5 (499-605)||(22755513-22755620)
chr5 (502-605)||(26120860-26120963)
chr5 (527-726)||(20549589-20549784)
chr5 (499-604)||(15469928-15470034)
chr5 (500-732)||(15690771-15691008)
chr5 (499-605)||(26110462-26110568)
chr5 (499-601)||(26121328-26121430)
chr5 (527-726)||(28664794-28664989)
chr5 (503-576)||(15544047-15544120)
chr5 (499-622)||(19283840-19283962)
chr5 (492-629)||(25402314-25402451)
chr5 (500-604)||(24852173-24852278)
chr5 (506-723)||(34128636-34128860)
chr5 (503-554)||(32417407-32417458)
chr5 (508-724)||(23388723-23388935)
chr5 (508-605)||(39434464-39434561)
chr5 (507-576)||(28253281-28253350)
chr5 (524-726)||(17314984-17315182)
chr5 (644-722)||(26835796-26835872)
chr5 (503-604)||(17185459-17185561)
chr5 (499-589)||(24167600-24167691)
chr5 (499-542)||(24662214-24662257)
chr5 (492-561)||(19051534-19051604)
chr5 (636-729)||(24260655-24260746)
chr5 (640-730)||(26121191-26121280)
chr5 (502-559)||(9521009-9521066)
chr5 (499-603)||(19086181-19086286)
chr5 (527-722)||(20858705-20858896)
chr5 (517-604)||(23265164-23265252)
chr5 (636-731)||(24265342-24265435)
chr5 (636-731)||(24341973-24342066)
chr5 (503-559)||(27921448-27921503)
chr5 (550-605)||(24260560-24260615)
chr5 (503-562)||(26307600-26307658)
chr5 (502-542)||(20419951-20419991)
chr5 (503-570)||(23380292-23380360)
chr5 (636-720)||(36175272-36175354)
chr5 (517-576)||(20534082-20534141)
chr5 (518-577)||(32581898-32581957)
chr5 (636-720)||(39434601-39434676)
chr5 (639-669)||(22755664-22755694)
chr5 (507-540)||(17769461-17769494)
chr5 (639-723)||(24662052-24662133)
[»] scaffold0638 (1 HSPs)
scaffold0638 (509-735)||(684-919)
[»] scaffold0001 (2 HSPs)
scaffold0001 (497-741)||(69072-69323)
scaffold0001 (500-591)||(81480-81571)
[»] scaffold0005 (1 HSPs)
scaffold0005 (501-723)||(168173-168403)
[»] scaffold0054 (2 HSPs)
scaffold0054 (636-735)||(72148-72247)
scaffold0054 (495-559)||(72060-72125)
[»] scaffold0102 (1 HSPs)
scaffold0102 (491-732)||(35521-35771)
[»] scaffold0671 (1 HSPs)
scaffold0671 (546-726)||(482-658)
[»] scaffold0622 (1 HSPs)
scaffold0622 (501-605)||(722-828)
[»] scaffold0043 (1 HSPs)
scaffold0043 (502-605)||(89854-89957)
[»] scaffold0957 (1 HSPs)
scaffold0957 (492-723)||(3138-3369)
[»] scaffold0386 (2 HSPs)
scaffold0386 (635-724)||(5978-6067)
scaffold0386 (635-724)||(6588-6677)
[»] scaffold0056 (2 HSPs)
scaffold0056 (507-722)||(21277-21488)
scaffold0056 (635-726)||(25112-25202)
[»] scaffold0024 (1 HSPs)
scaffold0024 (499-732)||(39576-39818)
[»] scaffold0155 (1 HSPs)
scaffold0155 (502-735)||(35857-36099)
[»] scaffold0650 (1 HSPs)
scaffold0650 (502-604)||(6282-6385)
[»] scaffold0034 (1 HSPs)
scaffold0034 (527-726)||(76437-76632)
[»] scaffold0263 (1 HSPs)
scaffold0263 (636-724)||(15785-15872)
[»] scaffold0042 (1 HSPs)
scaffold0042 (509-605)||(29909-30005)
[»] scaffold0062 (1 HSPs)
scaffold0062 (526-692)||(43132-43307)
[»] scaffold0008 (2 HSPs)
scaffold0008 (499-735)||(54852-55097)
scaffold0008 (506-615)||(48182-48290)
[»] scaffold1869 (1 HSPs)
scaffold1869 (507-723)||(263-488)
[»] scaffold0838 (1 HSPs)
scaffold0838 (508-606)||(2371-2470)
[»] scaffold0832 (1 HSPs)
scaffold0832 (508-606)||(2402-2501)
[»] scaffold0048 (1 HSPs)
scaffold0048 (502-604)||(78589-78692)
[»] scaffold0016 (2 HSPs)
scaffold0016 (508-724)||(3533-3745)
scaffold0016 (503-570)||(12105-12173)
[»] scaffold0653 (1 HSPs)
scaffold0653 (500-604)||(4484-4589)
[»] scaffold0111 (1 HSPs)
scaffold0111 (635-723)||(3771-3859)
[»] scaffold0427 (1 HSPs)
scaffold0427 (543-625)||(2800-2880)
[»] scaffold0238 (1 HSPs)
scaffold0238 (499-604)||(19103-19208)
[»] scaffold0090 (1 HSPs)
scaffold0090 (502-592)||(7425-7516)
[»] scaffold0136 (1 HSPs)
scaffold0136 (499-576)||(15494-15572)
[»] scaffold0019 (2 HSPs)
scaffold0019 (503-604)||(11236-11338)
scaffold0019 (508-605)||(181706-181803)
[»] scaffold0672 (1 HSPs)
scaffold0672 (499-591)||(1726-1819)
[»] scaffold0006 (2 HSPs)
scaffold0006 (500-599)||(18750-18851)
scaffold0006 (501-601)||(223033-223135)
[»] scaffold0598 (1 HSPs)
scaffold0598 (500-559)||(5321-5380)
[»] scaffold0394 (1 HSPs)
scaffold0394 (503-550)||(13963-14010)
[»] scaffold0351 (1 HSPs)
scaffold0351 (636-720)||(5641-5724)
[»] scaffold0002 (1 HSPs)
scaffold0002 (640-720)||(114631-114710)
[»] scaffold0063 (1 HSPs)
scaffold0063 (499-542)||(51115-51158)


Alignment Details
Target: chr2 (Bit Score: 617; Significance: 0; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 617; E-Value: 0
Query Start/End: Original strand, 19 - 735
Target Start/End: Original strand, 17348875 - 17349585
Alignment:
Q  19 atttgatttgtgctttatagtatatacaaaagtgcagctatctgacattttgactattttccgctcaacaatctctcaagtaccattttttcaagcgctt 118  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17348875 atttgatttgtgctttatagtatatacaaaagtgcagctaactgacattttgactattttccgctcaacaatctctcaagtaccattttttcaagcgctt 17348974  T
Q  119 tcattttctcattcacgacttcaacccaatatctatgtatcaatgtttctttaacagatgatgagattcttacaaaatcaacatctgcaataaaactcta 218  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17348975 tcattttctcattcacgacttcaacccaatttctatgtatcaatgtttctttaacagatgatgagattctcacaaaatcaacatctgcaataaaactcta 17349074  T
Q  219 atactttgtggaagctatttagtggagacatattgagaactataatatccaatataatgaggtacatgatattttatcctttctcaaaacaatgagtaaa 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17349075 atactttgtggaagctatttagtggagacatattgagaactataatatccaatataatgaggtacatgatattttatcctttctcaaaacaatgagtaag 17349174  T
Q  319 ccaattggattagtatcataaatataagaatcaccattagaggaatcattttcagtacatacctccagcttaggccattgcagttgtttctgaagcagat 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17349175 ccaattggattagtatcataaatataagaatcaccattagaggaatcattttcagtacatacctccagcttaggccattgcagttgtttctgaagtagat 17349274  T
Q  419 caagtttatttcttcccttaaacattataaattggtttcataggtgatgtgatgaataatttatcaagcataatgatgtgcggattaggcaagtgtacca 518  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||| |||||||||| ||||| |    
T  17349275 taagtttatttcttctcttaaacattataaattggtttcataggtgatgtgatg-----tttatcaagcataatgatgtgcagattaggcaa-tgtacta 17349368  T
Q  519 aatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaat 618  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||| ||    
T  17349369 aatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttattttgtaagttgacgat 17349468  T
Q  619 ataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaa 718  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  17349469 ataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtcagaattcttcgaa 17349568  T
Q  719 tcccctctatttatatt 735  Q
    |||||||||||||||||    
T  17349569 tcccctctatttatatt 17349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 492 - 735
Target Start/End: Original strand, 15339223 - 15339475
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaa-gtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| || |||||||||| |||||| | ||||| |||||||||||||||||||    
T  15339223 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaatt 15339322  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttg 682  Q
     |||||||||| |||||||||| |  ||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||  |||||||||    
T  15339323 agcgttacttactttgtaagttaaggatataataaaagataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttg 15339422  T
Q  683 ttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  15339423 ttgcagaaaagtaagcagcagttaggattcttcaaatcccctctatttatatt 15339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 493 - 732
Target Start/End: Complemental strand, 29719344 - 29719097
Alignment:
Q  493 gatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  29719344 gatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattc 29719245  T
Q  592 gcgttacttattttgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgt 683  Q
    |||||||||||||| ||  |||||  |||||||||| ||||||        |||||||||||||| ||| ||||||||||||||||||| ||| ||| ||    
T  29719244 gcgttacttatttt-tagtttgacggtataataaaatataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggt 29719146  T
Q  684 tgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||    
T  29719145 tgcagaaaagtaagcagcagttaggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 492 - 735
Target Start/End: Complemental strand, 26603464 - 26603223
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||  ||| ||||| || |||||| |||||||||    
T  26603464 tgatgtgcggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaatt 26603365  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
      ||||||||||||| |   |||||  ||| ||||||||||   ||||||||||||||||||||||||||||||| |||||| ||||||| |||| ||||    
T  26603364 gacgttacttatttt-tggtttgacggtatgataaaagatagatgttgcaatttttatctgtttgcaacagagca-gtttacctgtttttggttgtagaa 26603267  T
Q  691 aagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||||||| |||||||||||||||||| |||||||||||    
T  26603266 aagtaagcagcggttaggattcttcgaatcccc-ctatttatatt 26603223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 506 - 735
Target Start/End: Complemental strand, 27909219 - 27908981
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | || |||| ||||| |||||||||||| ||||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattt 27909120  T
Q  605 t-gtaagtt-gacaatataa----taaaaga--ta-agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    | ||||||| ||| ||||||    ||||||   || |  |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| ||    
T  27909119 ttgtaagtttgacgatataaaagttaaaagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacctgttttg-gttgcagaaaatta 27909021  T
Q  696 agcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  27909020 agcagcggttaggattcttcgaatcccccctatttatatt 27908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 508 - 723
Target Start/End: Original strand, 30411679 - 30411892
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt- 605  Q
    ||||||||| ||||| |||| || ||||||||||| |||||||||||||||||| | | ||||| || |||||||| ||||||| ||||||||||||||     
T  30411679 caagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttattttt 30411778  T
Q  606 gtaagtt-gacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    |||| || |||| |||||   ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  30411779 gtaattttgacagtataa---aagata--ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggt 30411873  T
Q  705 caggattcttcgaatcccc 723  Q
     |||||| |||||||||||    
T  30411874 taggatttttcgaatcccc 30411892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 492 - 723
Target Start/End: Original strand, 25618542 - 25618780
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||| ||| ||||||||| | |||||||||||||| ||||||||||||| |||||| | ||||| |||||||||| ||||||||    
T  25618542 tgatgtgcggattaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaatt 25618640  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaaga---------ta-agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
    ||||| ||||||||  | ||||||| |||||||||||||         || ||  |||||||||||||||||||||||||||| |||||||| || ||||    
T  25618641 cgcgtaacttattt--ttagttgacgatataataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctg-tttt 25618737  T
Q  681 tgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
     |||||||||||||||||||||||  | |||||||||||||||    
T  25618738 ggttgcagaaaagtaagcagcggttcgaattcttcgaatcccc 25618780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 492 - 704
Target Start/End: Complemental strand, 31805014 - 31804792
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||| |||||| ||||||||||||| ||||| ||| |||||||||| |||||||||||| ||||||| |  ||||  |||||||||||| ||||     
T  31805014 tgatgtgcgaattaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatc 31804915  T
Q  591 cgcgttacttatttt-gtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
     | |||||||||||| |||||||||| ||||||||||||||||||        |||||||||||||| ||||||||| | ||||| ||||| |||||||     
T  31804914 tgtgttacttatttttgtaagttgacgatataataaaagataagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttg 31804815  T
Q  682 gttgcagaaaagtaagcagcggt 704  Q
    |||||||||||||||||||||||    
T  31804814 gttgcagaaaagtaagcagcggt 31804792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 506 - 735
Target Start/End: Complemental strand, 17743576 - 17743339
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||    
T  17743576 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattt 17743477  T
Q  604 ttgtaag-ttgacaatataa----taaaagata-agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    ||| ||| || || ||||||    |||  | || || |||||||||||||||| ||||||||  ||||||||||| ||||||| |||| ||||||| |||    
T  17743476 ttgcaagtttaacgatataaaagttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggttgtagaaaaggaag 17743377  T
Q  698 cagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    | ||||| |||||| || ||||| ||||  ||||||||    
T  17743376 ccgcggttaggattatttgaatctcctccgtttatatt 17743339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 542 - 724
Target Start/End: Original strand, 25920302 - 25920479
Alignment:
Q  542 gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataataaaagataagggttgca 640  Q
    ||||||||||||||||||||| | ||||| || |||||||| |||||||| ||||||||||||| ||||||||||| |||||   ||| ||   ||||||    
T  25920302 gtaagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttttgtaagttgacattataa---aagtta---gttgca 25920395  T
Q  641 atttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||| | | | ||||||| |||||||||    
T  25920396 atttttatctgtttgcaacagagcgattttacctgtttttggttgcagaaaagtgagcagtgattatgattctttgaatcccct 25920479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 499 - 732
Target Start/End: Original strand, 32085455 - 32085695
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||| | ||||| |||||||||| |||||  ||| ||||    
T  32085455 cggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgtta 32085554  T
Q  598 cttattttgtaagttgacaatat--aataaaaga--taag-------ggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||||||| ||||  |||||||||  ||||       | ||||||||||||||||||||||||||||||||||  || |  ||| |||||    
T  32085555 cttattt--taagttgacgatataaaataaaagagttaagagttagagattgcaatttttatctgtttgcaacagagcaagttacctgg--tttggttgc 32085650  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||||||||||||| |||| ||||  ||||||| ||||||||    
T  32085651 agaaaagtaagcagcggttaggactctttaaatcccc-ctatttat 32085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 502 - 732
Target Start/End: Original strand, 13776334 - 13776573
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||| |||||||| |||||||||||| || |||||||||| ||||| |||||||||||||| |  |||| || ||||||||||||||  | ||||||||    
T  13776334 attagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttactt 13776432  T
Q  601 attttgtaagttgacaatataataaa-agataagggtt---------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
    |||||  |||||||| ||| |||||| |||||||||||         |||||||||||||||||||||||||| ||| |||| ||||||||||| |||||    
T  13776433 atttt--aagttgacgataaaataaagagataagggttaagagatttgcaatttttatctgtttgcaacagagtaagattacctgttttttgttccagaa 13776530  T
Q  691 aagtaagcagcggt--caggattcttcgaatcccctctatttat 732  Q
    |||||| || ||||   ||||||||||||||| || ||||||||    
T  13776531 aagtaa-caacggttagaggattcttcgaatcgcccctatttat 13776573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 492 - 619
Target Start/End: Complemental strand, 25888334 - 25888212
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||| | ||||| ||||||    |||||||||    
T  25888334 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaatt 25888239  T
Q  591 cgcgttacttattttgtaagttgacaata 619  Q
    ||||||||||||||  |||||||||||||    
T  25888238 cgcgttacttattt--taagttgacaata 25888212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 729
Target Start/End: Complemental strand, 45621988 - 45621751
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgt-aagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||  ||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||    
T  45621988 cggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgtta 45621889  T
Q  598 cttattttgtaagttgacaatataataaaa---gataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||||| |  |   | |||| |||||||   ||||||||       ||| ||||||||||||||||||||| |||||||||||||| ||||  |||||    
T  45621888 cttatttttt--gaacaaaataaaataaaagatgataagggttagagtttgtaatttttatctgtttgcaacatagcaagtttacttg-ttttgattgca 45621792  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    | || || ||| ||||| | ||||||| ||||||||||||||    
T  45621791 g-aatgttagcggcggttaagattctttgaatcccctctatt 45621751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 501 - 605
Target Start/End: Complemental strand, 12953399 - 12953294
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||||| || |||| | ||||| |||||||||| |||||||||||||||||    
T  12953399 gattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttact 12953300  T
Q  600 tatttt 605  Q
    ||||||    
T  12953299 tatttt 12953294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 506 - 724
Target Start/End: Original strand, 28925521 - 28925747
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||| |||||||| | |||||||||||||| |||||||||  | |||||||   ||||| ||||||||||||||||||||  |||| ||||||    
T  28925521 ggcaagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattcatgttatttattt 28925619  T
Q  605 t-gtaagtt-gacaatataata---aaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    | ||||||| ||| |||||| |   ||||    | || | ||||||||||||| ||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  28925620 ttgtaagtttgacgatataaaagataaagggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctgttttg-gttgcagaaaagta 28925718  T
Q  696 agcagcggtcaggattcttcgaatcccct 724  Q
    ||||| ||| |||||||||||||||||||    
T  28925719 agcagaggttaggattcttcgaatcccct 28925747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 519 - 726
Target Start/End: Original strand, 29142973 - 29143177
Alignment:
Q  519 aatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gac 615  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||| | ||||| ||  ||||| | |||||||||||||||||||||| ||||||| |||    
T  29142973 aatcgttaatcaagtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttttgtaagtttgac 29143072  T
Q  616 aatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttc 715  Q
      |||||   ||| | ||  ||||||||||||||||||||||||||||||||||||| |  |||| |||| |||||||||| ||||||| | ||||||||    
T  29143073 ggtataa---aagtttag--ttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgtagaaaagtaaacagcggttaagattcttc 29143166  T
Q  716 gaatcccctct 726  Q
    |||||||||||    
T  29143167 gaatcccctct 29143177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 5777211 - 5777314
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||||| || |||||||||||| ||||||||| |||||| ||||||| ||| ||| ||||| |||||||||||||||||||| ||||||||    
T  5777211 gattaggcaagtgtatcatatcgtttatcaaataataaagtttaagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttactt 5777310  T
Q  601 attt 604  Q
    ||||    
T  5777311 attt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 600
Target Start/End: Original strand, 25939161 - 25939251
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||| ||||||||    
T  25939161 agtgtaccacatcatttatcaagtaataaagtgtaagtaaagtatcgtatccataaggattttcgtttcaaccaaacaattcacgttactt 25939251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 501 - 605
Target Start/End: Complemental strand, 20174740 - 20174635
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| | |||| | ||||| ||||||||||||||||||||  ||||||    
T  20174740 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttact 20174641  T
Q  600 tatttt 605  Q
    ||||||    
T  20174640 tatttt 20174635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 506 - 726
Target Start/End: Original strand, 25196010 - 25196238
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||| | || || || ||||||||||||||||| ||||||||||||    
T  25196010 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattt 25196108  T
Q  605 t--gtaagttgacaatat---aataaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    |   ||||||||| ||||   | | || |    | |||  ||| ||||||||| ||||||||||| ||||||||||| || |||| |||||| |||||||    
T  25196109 ttattaagttgacgatatataagttaatggttaaaaagacttgaaatttttatatgtttgcaacatagcaagtttacctg-ttttggttgcaaaaaagta 25196207  T
Q  696 agcagcggtcaggattcttcgaatcccctct 726  Q
    ||||| ||| |||||||||||| | ||||||    
T  25196208 agcagtggttaggattcttcgatttccctct 25196238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 5792823 - 5792926
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||  |||||||||| | | |||||||| |||||||||||| |||| ||||||||    
T  5792823 gattaggcaagtgtgccaaatcgtttattaagtaataacgtgtaagtatggtatcgtatctacatggattatcatttcgtccaaaccattcacgttactt 5792922  T
Q  601 attt 604  Q
    ||||    
T  5792923 attt 5792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 506 - 723
Target Start/End: Original strand, 25530445 - 25530660
Alignment:
Q  506 ggcaagtgtaccaaatcgttt--atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    |||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||| | ||||| || ||||||||  | ||||| | ||||||||    
T  25530445 ggcaagtgtaccaa-tcgttttcatcaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttat 25530543  T
Q  603 ttt-gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagc 701  Q
    ||| || ||||   |   || |||||| ||||  ||||||||||||||||||||||||||||| | ||||| || |||| |||||| || ||||||||||    
T  25530544 ttttgtgagttttgatggta-taaaag-taag--ttgcaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcaaaatagtaagcagc 25530638  T
Q  702 ggtcaggattcttcgaatcccc 723  Q
    ||| ||||||||||||||||||    
T  25530639 ggttaggattcttcgaatcccc 25530660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 506 - 735
Target Start/End: Complemental strand, 17635875 - 17635637
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtgtaa-gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||| |||| ||||||||||| |||||||||||| | || |||||| ||| |||||| |  |||| |||||||||| ||| || || ||||||||||||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttattt 17635776  T
Q  605 t-gtaagttgacaatataa----taaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    | |||||||||| || |||    ||||||    | || ||||||||||||||||||||||||||||||||||||||| || |||| |||||||| || ||    
T  17635775 ttgtaagttgacgatgtaaaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagataaata 17635677  T
Q  696 agcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    | |||| || || ||| ||||||| ||| || ||||||||    
T  17635676 aacagcagttagaatttttcgaattccccctgtttatatt 17635637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 23011869 - 23011764
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||| ||||||||||||||||||  |||| |||||||||||||||||||||| ||| ||||||| ||||||| |||||| ||| |||||||| ||||||     
T  23011869 cggaataggcaagtgtaccaaattttttaccaagtaataaagtgtaagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttat 23011770  T
Q  599 ttattt 604  Q
    ||||||    
T  23011769 ttattt 23011764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 17197888 - 17198084
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataat 623  Q
    ||||||| |||||||  ||||||||||||| |||||||    |||| || |||||||| |||||||| |||| |||||||| ||||||||||| |||||     
T  17197888 atcaagttataaagttagtaagtagagtattgtatccacggagattgtcctttcgtccgaacaattctcgtttcttatttttgtaagttgacagtataa- 17197986  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
      |||  |   ||||||| ||||||| ||||||| |||||| | || || | ||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  17197987 --aagtga---gttgcaacttttatcagtttgcagcagagcgaattcacctatttttggttgcagaaaagtaagcagcggttaagattcttcgaatcccc 17198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 636 - 735
Target Start/End: Complemental strand, 25887864 - 25887766
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||||||| ||||| | | |||||||| ||||||| |||||||||||    
T  25887864 ttgcaatttttatctgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaatcccccctatttatatt 25887766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 506 - 735
Target Start/End: Complemental strand, 17675730 - 17675491
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtgtaa-gtagagtatcgtatccataaggattatcgtttcgtccaaacaat-tcgcgttacttatt 603  Q
    ||||| |||| ||||||||||| |||||||||||| | || |||||| ||| |||| | |  |||| |||||||||| ||| ||  || |||||||||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaactcacgttacttatt 17675631  T
Q  604 tt-gtaagttgacaatataa----taaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
    || |||||||||| || |||    ||||||    | || ||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| |    
T  17675630 tttgtaagttgacgatgtaaaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcagaaaaat 17675532  T
Q  695 aagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    || ||||||| || ||| ||||||| ||| || ||||||||    
T  17675531 aaacagcggttagaatttttcgaattccccctgtttatatt 17675491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 604
Target Start/End: Complemental strand, 8447152 - 8447051
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| | ||||| ||||| |  | | |||| |||||||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtataagtagattatcgtatccacatggattgtcgttccaactagacaactcgcgttacttat 8447053  T
Q  603 tt 604  Q
    ||    
T  8447052 tt 8447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 45553124 - 45553228
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||  | | ||||| |||||| |||||| ||||||| |||| |    
T  45553124 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaat 45553223  T
Q  600 tattt 604  Q
    |||||    
T  45553224 tattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 492 - 696
Target Start/End: Complemental strand, 11382867 - 11382654
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||| ||||||  |||||||| ||||||||||| ||  |||||||||| ||||||||||||| |||||| | | ||| |  |||| |||||| ||||    
T  11382867 tgatgtgtggattaaacaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataatt 11382768  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaaga---------ta-agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
    ||||||||||||||| ||  ||||| |||  ||||||||         || ||  |||||| ||||||||||||||||||||||||| ||||||||||||    
T  11382767 cgcgttacttatttt-tagtttgacgataagataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagagcaag-ttacttgttttt 11382670  T
Q  681 tgttgcagaaaagtaa 696  Q
    ||||| ||||||||||    
T  11382669 tgttgtagaaaagtaa 11382654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 25070124 - 25070225
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    |||| ||||| || ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||| |  | | ||||||| ||||||||||    
T  25070124 ttagacaagtatatcaaatcgtttatcaaataataaagtgtaagtagagtatcgcatccacaaggattgtcgttccaactagacaattcacgttacttat 25070223  T
Q  603 tt 604  Q
    ||    
T  25070224 tt 25070225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 12557811 - 12557744
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggatt 570  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| ||||| ||||| |||||||    
T  12557811 ttaggcaagtgtaccaaatcttttaccaagtaataaagtgtaagtagaatatcgaatccacaaggatt 12557744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 19200237 - 19200135
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||||||||||||| |||| ||| |||||| ||| ||||| |||||||||||||| ||||||| ||||||| ||||||||| || | |||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaactcacattactta 19200139  T
Q  602 tttt 605  Q
    ||||    
T  19200138 tttt 19200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 636 - 723
Target Start/End: Complemental strand, 23933505 - 23933420
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |||||||||||||||||||||||||||||||| |||||||  ||| ||| || |||||||||||||||| ||||||||| ||||||||    
T  23933505 ttgcaatttttatctgtttgcaacagagcaag-ttacttg-gtttggtttcacaaaagtaagcagcggttaggattctttgaatcccc 23933420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 604
Target Start/End: Complemental strand, 8503173 - 8503071
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||| |||||| | ||||| || ||||  |||||||||| |||||||| |    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaa 8503074  T
Q  602 ttt 604  Q
    |||    
T  8503073 ttt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 726
Target Start/End: Complemental strand, 24091005 - 24090810
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaag-ttgacaatataat 623  Q
    |||||||||||||||| ||| |||| ||||||||||| | ||||| || |||||||||||||||||  |||||||| ||||||||| |||||  ||||      
T  24091005 atcaagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttttgtaagtttgacggtata-- 24090908  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||| ||     |||||||||||||| | ||||||| |  || | ||||| || |||| ||||||||||||||||||| ||| ||||| ||||||||||||    
T  24090907 aaatga----agttgcaatttttatatttttgcaaaactgcgaatttacctg-ttttggttgcagaaaagtaagcagtggttaggatgcttcgaatcccc 24090813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 723
Target Start/End: Original strand, 25535294 - 25535486
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt---tgtaagttgacaatataa 622  Q
    |||||||||||||||| |||||||||||||||||||| | ||||| || |||||||| ||||||||  |||||||||||   || |  |||||  |        
T  25535294 atcaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtgaactttgacggt---- 25535389  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
    |||||| |||  |||||||||||||||| |||||||||| |  | ||||| || |||| |||||| ||||||||||||||||  ||||||||||||||||    
T  25535390 taaaag-taa--gttgcaatttttatctatttgcaacagcgtgaatttacctg-ttttggttgcaaaaaagtaagcagcggttgggattcttcgaatccc 25535485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 17889929 - 17890034
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||  ||||||||||||||||||||  || ||||| ||||||||||| ||||| ||| |||| ||||| ||||||||  ||||||||| ||||||     
T  17889929 cggattatacaagtgtaccaaatcgtttactaaataatacagtgtaagtagggtatcatattcatagggattgtcgtttcgatcaaacaatttgcgttaa 17890028  T
Q  599 ttattt 604  Q
    ||||||    
T  17890029 ttattt 17890034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 25885563 - 25885460
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||| | ||||||||||||||||  ||||||||| ||| |||| | ||||||||||||| ||| ||| ||||||||||||||||||| | |||||||    
T  25885563 attaggcgattgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttactt 25885465  T
Q  601 atttt 605  Q
    |||||    
T  25885464 atttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 527 - 615
Target Start/End: Original strand, 26667337 - 26667428
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagttgac 615  Q
    |||||||||||||||  ||||||||||||||||||||| | ||||| || |||||| | |||||||| ||||||||| ||||||||||||||    
T  26667337 atcaagtaataaagttagtaagtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttatttttgtaagttgac 26667428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 604
Target Start/End: Complemental strand, 28770548 - 28770444
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||| ||| |||||||||||| |||| ||| |||||||||| |||||||||||||||||||||| | | | || |||| |||||||||||| || ||||    
T  28770548 gattaagcacgtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaattcacgctact 28770449  T
Q  600 tattt 604  Q
    |||||    
T  28770448 tattt 28770444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 578
Target Start/End: Complemental strand, 32440095 - 32440024
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttc 578  Q
    ||||||||||||||| ||||| |||| |||||||||||| || |||||||||||||  ||||||||||||||    
T  32440095 gcaagtgtaccaaattgtttaccaagaaataaagtgtaaataaagtatcgtatccacgaggattatcgtttc 32440024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 606
Target Start/End: Original strand, 27418389 - 27418466
Alignment:
Q  530 aagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg 606  Q
    ||||||||||||| ||||||||||||| |||||| | |||||||| ||||  |||||||||||| |||||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttattttg 27418466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 605
Target Start/End: Complemental strand, 9774440 - 9774335
Alignment:
Q  498 gcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||| |||| | || |||| | |||| ||||||||| | ||||||||||||||||| | ||||| |||||| |||||| ||||| ||||||    
T  9774440 gcggattaggcaaatgtatcgaaccgtt-accaaggaataaagtg-atgtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgtta 9774343  T
Q  598 cttatttt 605  Q
    ||||||||    
T  9774342 cttatttt 9774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 668 - 726
Target Start/End: Original strand, 26667464 - 26667522
Alignment:
Q  668 tttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    ||||| ||||||  ||||||||||||||| ||||||| |||||||||||||||||||||    
T  26667464 tttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatcccctct 26667522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 651 - 716
Target Start/End: Complemental strand, 12953290 - 12953225
Alignment:
Q  651 gtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcg 716  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||| || | | |||||||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagcaacgattacgattcttcg 12953225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 27869795 - 27869852
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatc 560  Q
    |||| |||||||||||||| |||||| ||||||||| |||| ||||||||||||||||    
T  27869795 ttagacaagtgtaccaaattgtttattaagtaataatgtgttagtagagtatcgtatc 27869852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 562
Target Start/End: Original strand, 25936925 - 25936977
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    ||||||||| ||||||||| |||||||||||||||||||||| ||| ||||||    
T  25936925 agtgtaccacatcgtttattaagtaataaagtgtaagtagagaatcatatcca 25936977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 723
Target Start/End: Original strand, 45553268 - 45553352
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||||||||||||| |||||| |||| || |||| ||||||| || || ||||||||| ||||||||| ||||||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaag-ttacctg-ttttggttgcag-aacgttagcagcggttaggattctttgaatcccc 45553352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 635 - 729
Target Start/End: Original strand, 17890075 - 17890167
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    |||||||||||||| |||||||||||||||||| |||| || |||| |||||||||| ||||||| || | | |||||||  ||||||| |||||    
T  17890075 gttgcaatttttatatgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagcaacgattaagattctttcaatcccccctatt 17890167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 21078685 - 21078627
Alignment:
Q  546 gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||  |||| |||||||    
T  21078685 gtagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttattt 21078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 621
Target Start/End: Complemental strand, 28606239 - 28606164
Alignment:
Q  544 aagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatata 621  Q
    |||||||||||||||||||  |||||| |||||||||| |||||  | |||||||||||||  ||||||||| |||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattt--taagttgacgatata 28606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 555
Target Start/End: Complemental strand, 18540080 - 18540028
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatc 555  Q
    |||| ||||||||| |||| |||||||||||| | ||||||||||||||||||    
T  18540080 ttagacaagtgtacaaaattgtttatcaagtagtgaagtgtaagtagagtatc 18540028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 492 - 555
Target Start/End: Complemental strand, 20173411 - 20173348
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatc 555  Q
    |||||||||||||||| ||||||||||||||| ||| ||||| |||||||| |||| ||||||||    
T  20173411 tgatgtgcggattaggaaagtgtaccaaatcg-ttaccaagttataaagtgataagcagagtatc 20173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 18554009 - 18553952
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatc 560  Q
    |||||||||||||| |||| | |||||||||| |||||| ||| ||||||||| ||||    
T  18554009 ttaggcaagtgtacaaaattggttatcaagtagtaaagtataattagagtatcatatc 18553952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 25933111 - 25933152
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtgtaagtagag 551  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  25933111 agtgtaccacatcgtttattaagcaataaagtgtaagtagag 25933152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 104)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 492 - 723
Target Start/End: Original strand, 2563803 - 2564043
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||     
T  2563803 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattt 2563902  T
Q  592 gcgttacttattt-tgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttg 682  Q
    | ||||||||||| |||||||| || ||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||| || |||       
T  2563903 gtgttacttatttctgtaagttcacgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgctttagt 2564002  T
Q  683 ttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||| |||||| ||||| ||||||||||||    
T  2564003 ttgcagaaaagtaagtagcggttaggatccttcgaatcccc 2564043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 492 - 735
Target Start/End: Original strand, 5108551 - 5108801
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    ||||||| ||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5108551 tgatgtgtggatttggcaagtgtaccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattc 5108650  T
Q  592 gcgttacttattttgtaagttgacaatataataaaaga-ta---------agggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
    |    ||||||||| ||||||||| ||||||||||||| ||         || ||| |||||||||||||||||||| |||||||||||||||| ||||     
T  5108651 g-aacacttatttt-taagttgacgatataataaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttg 5108748  T
Q  682 gttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  5108749 gttgcagaaaagtaagcagcggttaggattctttgaatcccc-ctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 492 - 724
Target Start/End: Original strand, 6042446 - 6042676
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    ||||||||||||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||||||| |  | || ||||||||| |||||||||     
T  6042446 tgatgtgcggattagacaagtgtatcaaatcgtttaccatgtaataaaatgtaagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaattt 6042545  T
Q  592 gcgttacttattttgtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaa 691  Q
    |||||||||||||| ||  |||||  ||||||||||||||   |||||||||||||| |||||||||||||| |||||||| | ||||| ||||||||||    
T  6042546 gcgttacttatttt-tagtttgacggtataataaaagatagatgttgcaatttttatatgtttgcaacagag-aagtttacctttttttggttgcagaaa 6042643  T
Q  692 agtaagcagcggtcaggattcttcgaatcccct 724  Q
    | ||||||||||| ||||||||| |||||||||    
T  6042644 aataagcagcggttaggattctttgaatcccct 6042676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 492 - 712
Target Start/End: Complemental strand, 3329772 - 3329542
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||| ||||||| |||||  |||| |||||||||||||| |||||||||||||||||||| | ||||| ||||||| ||||||||||     
T  3329772 tgatgtgcggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatc 3329673  T
Q  591 cgcgttactta-ttttgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
     |||||||||| ||||||||||| |   |||||| ||||||||||        |||||||||||||||||||||||||| |||||||||||||||||||     
T  3329672 tgcgttacttatttttgtaagtttaacgtataatgaaagataagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttg 3329573  T
Q  682 gttgcagaaaagtaagcagcggtcaggattc 712  Q
    ||||||||||||||||||||||| |||||||    
T  3329572 gttgcagaaaagtaagcagcggttaggattc 3329542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 509 - 735
Target Start/End: Complemental strand, 8979103 - 8978868
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-g 606  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||| |||||| | ||||| | |||||||||||||||||||| ||||||||||| |    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttgg 8979004  T
Q  607 taag-ttgacaatata----ataaaa--gataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    |||| |||||||||||    ||||||  | || |  |||||||||| |||||||||||| ||| ||||||||| ||||||| ||||||||||| ||||||    
T  8979003 taagtttgacaatataaaagataaaagggttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagca 8978904  T
Q  700 gcggtcaggattcttcgaatcccctctatttatatt 735  Q
    || || |||||||||  |||||||||| ||||||||    
T  8978903 gcagttaggattctttaaatcccctctgtttatatt 8978868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 499 - 735
Target Start/End: Original strand, 16365697 - 16365942
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaa-gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||  ||||||||||||||||||| |||||||||||||  || ||||||||||||||||| | ||||| |||||| || ||||||||||||||||    
T  16365697 cggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgtta 16365796  T
Q  598 cttattttgtaagttgacaatataataaaaga--taagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||||| ||||||||| |||||||||||||  |||||         || ||||||| |||| |||||| | ||||||| |||| ||||||| ||||||    
T  16365797 cttatttt-taagttgacgatataataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaag-ttacatgtttttggttgca 16365894  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
     |||||||||||||||| ||||||||||||||| || |||||||||||    
T  16365895 aaaaagtaagcagcggttaggattcttcgaatctcccctatttatatt 16365942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 498 - 704
Target Start/End: Original strand, 17077119 - 17077321
Alignment:
Q  498 gcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtt 596  Q
    ||||||||| ||| |||||||||| ||||||||| |||||||||| || ||||||||| ||||||||  ||||| ||||||||||||||||||||  |||    
T  17077119 gcggattagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgtt 17077218  T
Q  597 actta-ttttgtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    ||||| ||||||||||||||  |   ||||||| |  |||||||||||||||||||||||||| |||| |||||||| |||||| | |||||||||||||    
T  17077219 acttatttttgtaagttgacggt---ataaaagtt--gggttgcaatttttatctgtttgcaatagagtaagtttacctgttttgt-ttgcagaaaagta 17077312  T
Q  696 agcagcggt 704  Q
    |||||||||    
T  17077313 agcagcggt 17077321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 506 - 733
Target Start/End: Original strand, 13418533 - 13418756
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaa-gtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatt 603  Q
    |||||||||||||| ||||| | ||||||||||| ||| |||||||||||||||||||||| ||||| || ||||||||||||| ||  |||||||||||    
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatt 13418631  T
Q  604 ttgt-aagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcg 702  Q
    || | ||||||||  |||||   ||| ||  ||||||||||||||||||||||||||||||||||||||| || ||||  |||||| |||||||||||||    
T  13418632 tttttaagttgacggtataa---aagtta--ggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttgattgcagcaaagtaagcagcg 13418725  T
Q  703 gtcaggattcttcgaatcccctctatttata 733  Q
    || ||||||||| |||||| |||||| ||||    
T  13418726 gttaggattctttgaatccactctatatata 13418756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 499 - 693
Target Start/End: Original strand, 7318265 - 7318468
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| | ||||| |||||||||| |||||  |||| |||    
T  7318265 cggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcatta 7318364  T
Q  598 cttattttgtaagttgacaatat--aataaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||||||| ||||  ||||||  |||||||||       |||||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  7318365 cttattt--taagttgacgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaag-ttacttctttttggttgc 7318461  T
Q  687 agaaaag 693  Q
    |||||||    
T  7318462 agaaaag 7318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 492 - 605
Target Start/End: Complemental strand, 9731741 - 9731627
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||||| ||| ||||||| |||||||||||||||||||    
T  9731741 tgatgtgcggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaatt 9731642  T
Q  591 cgcgttacttatttt 605  Q
    |||||||||||||||    
T  9731641 cgcgttacttatttt 9731627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 530 - 726
Target Start/End: Original strand, 11803103 - 11803296
Alignment:
Q  530 aagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaag-ttgacaatataataaa 626  Q
    ||||||||||||| |||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||| ||||||||| |||||| |   |||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttttgtaagtttgacagt---ataaa 11803199  T
Q  627 agataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    || ||  ||||| ||||||||  ||||||||||||||||||||||| || |||| |||||||| |||||| ||||||| |||||| ||||||||||||||    
T  11803200 agtta--ggttgaaatttttagttgtttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaatcccctct 11803296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 500 - 724
Target Start/End: Complemental strand, 10587130 - 10586897
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| | | ||||| |||||||||| |||||| ||  |||||    
T  10587130 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttac 10587031  T
Q  599 ttattttgtaagttgacaatat--aataaaag--ataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    ||||||  |||||| |||||||  ||||||||  |||||||       ||||||||||||||||||||||||||||||||  ||| ||||| | ||||||    
T  10587030 ttattt--taagtttacaatataaaataaaagaaataagggttaaagattgcaatttttatctgtttgcaacagagcaag-atacatgtttctggttgca 10586934  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
     |||||||||||| ||| | || |||| |||||||||    
T  10586933 aaaaagtaagcagtggttaagactctttgaatcccct 10586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 527 - 726
Target Start/End: Complemental strand, 16059101 - 16058904
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataa 622  Q
    |||||||||||||||  ||||||||||||||||||||| | ||||| || ||||||||||||||||   |||||||||||| ||||||| |||  |||||    
T  16059101 atcaagtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttttgtaagtttgacggtataa 16059002  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
       |||  |   ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| || |||||||||||||||||    
T  16059001 ---aagtga---gtttcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcgaatccc 16058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 501 - 604
Target Start/End: Complemental strand, 14196077 - 14195974
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  14196077 gattaggcaagtgtaccaaatcgtttatcaaataataaagtgtaagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttactt 14195978  T
Q  601 attt 604  Q
    ||||    
T  14195977 attt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 530 - 735
Target Start/End: Complemental strand, 39273251 - 39273038
Alignment:
Q  530 aagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataataaa 626  Q
    ||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||| |||| | |||||||||||| ||||||| ||| ||||||   |    
T  39273251 aagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgatataa---a 39273155  T
Q  627 agataagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaa 718  Q
    || ||||||||        |||| ||| |||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||    
T  39273154 agttaagggttataaagttgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttaggatccttcgaa 39273055  T
Q  719 tcccctctatttatatt 735  Q
    || ||||| ||||||||    
T  39273054 tctcctctgtttatatt 39273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 506 - 734
Target Start/End: Complemental strand, 8054158 - 8053926
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| | | ||| |||||   |||||||||||| | ||||||| ||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattt 8054062  T
Q  604 ttgtaagttgacaatata----ataaaag--ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    |||||||||||| |||||    |||| ||  | |||  ||| || |||||||| ||||||| | ||||||||||| || |||| ||||||||||||||||    
T  8054061 ttgtaagttgacgatataaaagataagagttaaaagacttgtaaattttatctatttgcaatatagcaagtttacctg-ttttggttgcagaaaagtaag 8053963  T
Q  698 cagcggtcaggattcttcgaatcccctctatttatat 734  Q
    |||| || ||||||||| ||||||||||| |||||||    
T  8053962 cagcagttaggattctttgaatcccctctgtttatat 8053926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 506 - 720
Target Start/End: Complemental strand, 1848325 - 1848105
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||||| ||  | |||||||||||||| |||||| |||||||||||||   ||||| || |||||||||||||||| |||||||||||||    
T  1848325 ggcaagtgtaccaaattgt--accaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttattt 1848228  T
Q  605 t-gtaagtt-gacaatataataa---aagataaggg---ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaa 696  Q
    | ||||||| ||| |||||| ||   | | | || |   |||||||||||||||||||| |||||||||||||||| || |||| |||||||||||||||    
T  1848227 ttgtaagtttgacgatataaaaattaagggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctg-ttttggttgcagaaaagtaa 1848129  T
Q  697 gcagcggtcaggattcttcgaatc 720  Q
    |||||||| | |||||||||||||    
T  1848128 gcagcggttatgattcttcgaatc 1848105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 501 - 732
Target Start/End: Original strand, 3734590 - 3734829
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||| |||||||||||||  |||| |||||||||||||| |||||||||||||||||||| | | ||| | |||| ||||||||||||| |||||||    
T  3734590 gattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttact 3734689  T
Q  600 tattttgtaagttgacaatat--aataaaaga--taaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    |||||  ||||||||| ||||  |||||||||  ||||||       |||||| ||||||||||||||||||||||||| |||| || |||| |||||||    
T  3734690 tattt--taagttgacgatataaaataaaagagttaagggttaaagattgcaaattttatctgtttgcaacagagcaag-ttacctg-ttttggttgcag 3734785  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||||||  ||| |||| |||| ||||| || ||||||||    
T  3734786 aaaagtaagcaatggttaggactctttgaatctcccctatttat 3734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 492 - 735
Target Start/End: Original strand, 4785822 - 4786077
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||||||| |||||||||||||  ||||| | ||||| ||||||||||||| || ||    
T  4785822 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcactt 4785920  T
Q  591 cgcgttacttattttgtaagttgacaatataa--taaaaga--taagggttgcaa-----------tttttatctgtttgcaacagagcaagtttacttg 675  Q
    | |||||||||||||   ||||||| ||||||  |||||||  ||||||||  |            ||||||||| ||||||| |||||||||| || ||    
T  4785921 cacgttacttattttt--agttgacgatataaaataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaagtt-acctg 4786017  T
Q  676 ttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  4786018 tttttggttgcagaaaagtaagcagcggttaggattcttcgaatccctcctatttatatt 4786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 723
Target Start/End: Original strand, 18662433 - 18662664
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||| ||||||||| ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  18662433 cggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgtta 18662532  T
Q  598 cttattttgtaagttgacaatat-aataaaagataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    ||||||| ||  |   | ||||| ||||||||||  | |         ||||||||||||| |||||||||||||||||| |||| || |||| ||||||    
T  18662533 cttatttggt--gaacaaaatataaataaaagatttgagagttagatattgcaatttttatttgtttgcaacagagcaag-ttacctg-ttttggttgca 18662628  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |||| |||||||||||| |||| |||||||||||||    
T  18662629 gaaatgtaagcagcggttaggactcttcgaatcccc 18662664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 506 - 723
Target Start/End: Complemental strand, 18369080 - 18368853
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    ||||||||||| |||| ||||| |||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||||  |||||||| ||    
T  18369080 ggcaagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T
Q  604 ttgtaagttgacaatataataaaagat-aagggt----------tgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaa 692  Q
    || ||||||||||| || ||||||||| ||||||          |||||||||||||||||||||||| |||||| |||| || |||| |||| ||||||    
T  18368980 ttataagttgacaa-at-ataaaagataaagggttagaaagtcgtgcaatttttatctgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaa 18368884  T
Q  693 gtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||| | |||| ||||||| | ||||||||    
T  18368883 gtaagaaacggttaggattccttgaatcccc 18368853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 9864433 - 9864327
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||| |||||||| ||||||    
T  9864433 cggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgtta 9864334  T
Q  598 cttattt 604  Q
    |||||||    
T  9864333 cttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 506 - 722
Target Start/End: Original strand, 20582258 - 20582479
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||| ||||||||||||||| ||| |||||||||| |||||   |||||||||||| | ||||  ||||||| |||| ||||||| ||||||||| ||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaatt 20582354  T
Q  604 ttgtaagttgacaatataataaaagataagggtt----------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaag 693  Q
    || ||||||||| ||||||   ||| ||||||||          ||||||||||||| ||||||||||||||||||||| || |||| ||||||||||||    
T  20582355 ttataagttgacgatataa---aaggtaagggttaaaaagatttgcaatttttatctatttgcaacagagcaagtttacctg-ttttggttgcagaaaag 20582450  T
Q  694 taagcagcggtcaggattcttcgaatccc 722  Q
    |||||||| || |||||||||||||||||    
T  20582451 taagcagcagttaggattcttcgaatccc 20582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 723
Target Start/End: Original strand, 9130898 - 9131135
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcg--tatccataaggattatcgtttcgtccaaacaattcgcgtt 596  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| |  |||||| | |||||||||||||||||||| |||| | | |    
T  9130898 cggattaggcaagtgtatcaaattgtttatcaagtaataaagtgtaagtatagtattgtatatccacatggattatcgtttcgtccaaataatttgtgat 9130997  T
Q  597 acttattttg-taagttgacaatataataaaaga--taaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgtt 684  Q
    |||||||| | |||    |  ||| |||||||||  ||||||         ||||||||||||| ||||||||| |||||||||| || ||||||| |||    
T  9130998 acttatttggttaacaaaatcataaaataaaagagttaaggggttagagatttgcaatttttatttgtttgcaatagagcaagttaac-tgtttttggtt 9131096  T
Q  685 gcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||| |||||||||| ||||| ||||||||||||||||||    
T  9131097 gcaaaaaagtaagctgcggttaggattcttcgaatcccc 9131135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 13759957 - 13759860
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttatttt 13759860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 499 - 723
Target Start/End: Complemental strand, 17153261 - 17153028
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||  ||||||| ||||| ||||| ||||||| |||||| |||||||||||||||||||| |  |||| |||||||||| |||||  ||||||||    
T  17153261 cggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgtta 17153162  T
Q  598 cttattttgtaagttgac--aatataataaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  |||||||||   ||| ||||||  |||||||||       |||  |||||||||||||||||||| |||||| |||| ||||||| |||||    
T  17153161 cttattt--taagttgacgacataaaataaaagagataagggttagagattgttatttttatctgtttgcaacaaagcaag-ttacctgtttttggttgc 17153065  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |||||||||||||||||| | || |||| ||||||||    
T  17153064 agaaaagtaagcagcggttatgactctttgaatcccc 17153028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 510 - 735
Target Start/End: Complemental strand, 7492358 - 7492130
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgta 608  Q
    |||||||||||| ||| ||| ||||||||| || |||||||||||||||||||| ||||||| | ||||||| ||||||||| || ||||||||||| ||    
T  7492358 agtgtaccaaattgtt-atccagtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttt-ta 7492261  T
Q  609 agttgacaatataataaaaga--taaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
      ||||  |||||||||||||  ||||||        |||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||     
T  7492260 ttttgatgatataataaaagagttaagggttagagatttgcaatttttaactgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaaga 7492162  T
Q  699 agcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||     |||||||||| ||||||| |||||||||||    
T  7492161 ag----taggattcttccaatcccc-ctatttatatt 7492130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 506 - 622
Target Start/End: Complemental strand, 8054589 - 8054471
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| || | | ||| ||||||||||||||||||||  |||||||| ||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T
Q  604 ttgtaagttgacaatataa 622  Q
    |||||||||||| ||||||    
T  8054489 ttgtaagttgacgatataa 8054471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 627
Target Start/End: Original strand, 12329674 - 12329802
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||| |||||||||||||||| ||||||| ||| || ||| |||||||| ||||||| ||||||| |||||| | ||||| ||| |||||||    
T  12329674 cggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgtta 12329773  T
Q  598 cttattttgtaagttgacaatataataaaa 627  Q
    |||||||| ||||||||| |||||||||||    
T  12329774 cttatttt-taagttgacgatataataaaa 12329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 500 - 735
Target Start/End: Original strand, 15869588 - 15869831
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||  ||||||| | |||| ||| ||| | |  |||||||    
T  15869588 ggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttac 15869687  T
Q  599 ttattttgtaagttgacaatat--aataaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    ||||||  ||||||||| ||||  ||||||  |||||||||       |||||| |||||||||||||||| |||  ||| |||| ||||||| ||||||    
T  15869688 ttattt--taagttgacgatataaaataaaatagataagggtttgagattgcaa-ttttatctgtttgcaatagaaaaag-ttacctgtttttggttgca 15869783  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
     |||||||| || |||| |||| |||| |||||||| || ||||||||    
T  15869784 taaaagtaaacaacggttaggactctttgaatcccccctgtttatatt 15869831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 492 - 591
Target Start/End: Complemental strand, 23100066 - 23099966
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||| || |||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |  |||| |||||||||||||||||||    
T  23100066 tgatgttcgaattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T
Q  591 c 591  Q
    |    
T  23099966 c 23099966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 499 - 718
Target Start/End: Original strand, 31492922 - 31493145
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||| | ||||| |||||| |||||||||||| |  |||    
T  31492922 cggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgtttta 31493021  T
Q  598 cttattttgtaagttgacaatataataaaaga--taagggt-----tgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
    ||||||||| ||    | |||| |||||||||  | |||||     |||||||||||||||||||||||||||  || ||||||| |||| |||| ||||    
T  31493022 cttattttg-aacaataaaata-aataaaagagttgagggttagagtgcaatttttatctgtttgcaacagagtcag-ttacttg-ttttggttgtagaa 31493117  T
Q  691 aagtaagcagcggtcaggattcttcgaa 718  Q
    | ||||||| |||| |||||||||||||    
T  31493118 atgtaagcaacggttaggattcttcgaa 31493145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 492 - 597
Target Start/End: Complemental strand, 2350861 - 2350755
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| || |||||||| ||||||||||| | ||||| |||||| ||||||| |||     
T  2350861 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatc 2350762  T
Q  591 cgcgtta 597  Q
    |||||||    
T  2350761 cgcgtta 2350755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 17203016 - 17203122
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||| ||||  |||| |||||| |||||||||||| ||||||||||||||||| ||   ||||| |||||||||||||||||| ||||||||    
T  17203016 cggattaggcaaatgtattaaattgtttatgaagtaataaagtataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttac 17203115  T
Q  599 ttatttt 605  Q
    |||||||    
T  17203116 ttatttt 17203122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 637
Target Start/End: Original strand, 1584537 - 1584673
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||| || |||| |||||||||||||| ||||| |||||||||||||| | ||||| | |||||||| |||||| ||||||||    
T  1584537 cggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgtta 1584634  T
Q  598 cttattttgtaagttgacaatataat-aaaagataagggtt 637  Q
    |||||||  ||||||||| ||| ||| ||||||||||||||    
T  1584635 cttattt--taagttgacgataaaataaaaagataagggtt 1584673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 6013587 - 6013692
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||||| ||||||| || |||  ||||||||||| || |||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttact 6013686  T
Q  600 tatttt 605  Q
    ||||||    
T  6013687 tatttt 6013692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 636 - 729
Target Start/End: Original strand, 7397280 - 7397372
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    ||||||||||||||||||||||||| | ||||||  || |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  7397280 ttgcaatttttatctgtttgcaacaaaacaagttatct-gtttttggttgcagaaaagtaagcagcggttaggattcttcgaattccctctatt 7397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 500 - 604
Target Start/End: Complemental strand, 10584592 - 10584487
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| | ||||| ||||||| |  |||||||||| |||||    
T  10584592 ggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttac 10584493  T
Q  599 ttattt 604  Q
    ||||||    
T  10584492 ttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 636 - 734
Target Start/End: Original strand, 8877559 - 8877657
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaa-agtaagcagcggtcaggattcttcgaatcccctctatttatat 734  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| |||||| ||| ||||||||||||| ||||||||| ||||||||||||| |||||    
T  8877559 ttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcaaaaatagtaagcagcggttaggattctttgaatcccctctatatatat 8877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 492 - 605
Target Start/End: Original strand, 4818822 - 4818935
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||||||| |||||||||||||  ||||| | ||||| ||||||||||||| || ||    
T  4818822 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcactt 4818920  T
Q  591 cgcgttacttatttt 605  Q
    | |||||||||||||    
T  4818921 cacgttacttatttt 4818935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 500 - 605
Target Start/End: Complemental strand, 11221270 - 11221164
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||| |||||||||||||||||||||  |||||||||| || |||||||||||| ||||||| | ||||| |||||||||  |||||||| |||||||    
T  11221270 ggattaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttac 11221171  T
Q  599 ttatttt 605  Q
    |||||||    
T  11221170 ttatttt 11221164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 629
Target Start/End: Original strand, 12181603 - 12181730
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgt-ccaaacaattcgcgttact 599  Q
    ||||||||||| ||||||||||||||| |||||||||||||  |||||||||| |||||||| | | ||| ||||||||| |||||||||||| ||||||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttact 12181702  T
Q  600 tattttgtaagttgacaatataataaaaga 629  Q
    |||||  ||||||||| ||| | |||||||    
T  12181703 tattt--taagttgacgataaattaaaaga 12181730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 732
Target Start/End: Original strand, 9574401 - 9574639
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||||||| | |  |||| | |||||||| |||| | |||||||| |    
T  9574401 gattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttatt 9574500  T
Q  600 tattttgtaagttgacaatat--aataaaaga--taaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    |||||  ||||||||| ||||  |||||||||  ||||||       ||| ||||||||||||||||||| |||||||||   || |||| |  ||| ||    
T  9574501 tattt--taagttgacgatataaaataaaagagttaagggttagaaattgtaatttttatctgtttgcaatagagcaagtaacctggtttgt--ttgaag 9574596  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||| |||| || ||||||||| |||||||| ||||||||    
T  9574597 aaaagtaaacagcagttaggattctttgaatcccc-ctatttat 9574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 500 - 604
Target Start/End: Original strand, 21230305 - 21230410
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||| || ||||||||||| ||| ||||||| || ||||||||||||||||| |||| |||||||||||||||| || ||||| | |||||    
T  21230305 ggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgttac 21230404  T
Q  599 ttattt 604  Q
    ||||||    
T  21230405 ttattt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 494 - 605
Target Start/End: Complemental strand, 16297932 - 16297820
Alignment:
Q  494 atgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcg 592  Q
    |||||| |||||||||||||||||||||  |||| |||||||||| ||| |||||||| |||||||| || | ||||| || |||||||||||||||||     
T  16297932 atgtgcagattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattca 16297833  T
Q  593 cgttacttatttt 605  Q
    | |||||||||||    
T  16297832 cattacttatttt 16297820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 4986547 - 4986654
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||||||||||||||| |||||||||||||| | |||||||||| ||| ||| | ||||| |||||||||| ||| |  ||||||||    
T  4986547 cggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgtta 4986646  T
Q  598 cttatttt 605  Q
    ||||||||    
T  4986647 cttatttt 4986654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 4990645 - 4990752
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||||||||||||||| |||||||||||||| | |||||||||| ||| ||| | ||||| |||||||||| ||| |  ||||||||    
T  4990645 cggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgtta 4990744  T
Q  598 cttatttt 605  Q
    ||||||||    
T  4990745 cttatttt 4990752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 502 - 604
Target Start/End: Original strand, 9500439 - 9500542
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||||| ||||| |||| |||||||||| ||| | | |||||||||||||||| ||||||| | |||||||| ||||||||||| ||||||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattactt 9500538  T
Q  601 attt 604  Q
    ||||    
T  9500539 attt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 5530013 - 5530119
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||| ||||||||||| ||||| ||||||||||| || |||||| || |||||||||| |  |||| ||||||||||||||||||| | ||||    
T  5530013 cggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgtta 5530112  T
Q  598 cttattt 604  Q
    |||||||    
T  5530113 cttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 10937598 - 10937700
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||||| | ||||| |||||||   |||||||||| | |||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattactta 10937697  T
Q  602 ttt 604  Q
    |||    
T  10937698 ttt 10937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 16306686 - 16306792
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| ||||||||  ||||| |||| |||||||||||||| |||||||||||||||||| | |||||||||| |||| || |||||||| || |||    
T  16306686 cggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcatta 16306785  T
Q  598 cttattt 604  Q
    |||||||    
T  16306786 cttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 18449238 - 18449340
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgt-aagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||||||||||| ||||| ||||| ||||||||||||||  ||||| | ||||||||||||| ||||| |||||||  |||||||||| ||||||||||    
T  18449238 ttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaattggcgttactta 18449337  T
Q  602 ttt 604  Q
    |||    
T  18449338 ttt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 18466001 - 18466103
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||  ||||||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||| |||||||  |||||||||| | ||||||||    
T  18466001 ttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttactta 18466100  T
Q  602 ttt 604  Q
    |||    
T  18466101 ttt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 501 - 732
Target Start/End: Original strand, 19153292 - 19153530
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| | |||||||  ||||  | || || |||||| ||||||| || ||||||||||    
T  19153292 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttact 19153389  T
Q  600 tattttgtaagttgacaatataataaa-agataagggtt---------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcaga 689  Q
    ||||||  ||| |||| ||| |||||| |||||||||||         ||||||||||||||||||||||| | |||| |||| ||||||| ||||||||    
T  19153390 tatttt--aaggtgacgataaaataaagagataagggttaagggatttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcaga 19153486  T
Q  690 aaagtaagcagcggt--caggattcttcgaatcccctctatttat 732  Q
    ||||||| || ||||   ||||||||||||||||||  |||||||    
T  19153487 aaagtaa-catcggttagaggattcttcgaatcccccatatttat 19153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 501 - 732
Target Start/End: Original strand, 20752691 - 20752929
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| | |||||||  ||||  | || || |||||| ||||||| || ||||||||||    
T  20752691 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttact 20752788  T
Q  600 tattttgtaagttgacaatataataaa-agataagggtt---------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcaga 689  Q
    ||||||  ||| |||| ||| |||||| |||||||||||         ||||||||||||||||||||||| | |||| |||| ||||||| ||||||||    
T  20752789 tatttt--aaggtgacgataaaataaagagataagggttaagggatttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcaga 20752885  T
Q  690 aaagtaagcagcggt--caggattcttcgaatcccctctatttat 732  Q
    ||||||| || ||||   ||||||||||||||||||  |||||||    
T  20752886 aaagtaa-catcggttagaggattcttcgaatcccccatatttat 20752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 6005829 - 6005934
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||| |||| |||||||| ||||| ||| ||||||| |||||  ||||||| ||||||| | ||||| |||||| ||||||||||||| ||||||    
T  6005829 cggattaggtaagtttaccaaattgtttaccaattaataaattgtaaccagagtattgtatccacatggattgtcgtttggtccaaacaattcacgttac 6005928  T
Q  599 ttattt 604  Q
    ||||||    
T  6005929 ttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 500 - 577
Target Start/End: Original strand, 7397189 - 7397266
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgttt 577  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||||||||| | ||||| ||||||    
T  7397189 ggattaggaaagtgtaccaaaccgtttaccaagtaataaagtgtaactagagtatcgtatccacatggattgtcgttt 7397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 604
Target Start/End: Complemental strand, 22339418 - 22339312
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaata---aagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||| ||| ||||||||||| ||||||||||||||   ||||| |||||| ||||||| ||||  ||||||| |||||||||||||||||||||| |||    
T  22339418 attagacaaatgtaccaaatcatttatcaagtaatattaaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgcctta 22339319  T
Q  598 cttattt 604  Q
    |||||||    
T  22339318 cttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 503 - 562
Target Start/End: Complemental strand, 26134850 - 26134791
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  26134850 ttagacaagtgtaccaaatcgtttaccaagtaataaaatgtaagtagagtatcgtatcca 26134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 4579090 - 4579195
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||| ||||||||||| ||||||||||||  ||||||||| ||| |||||||||||||||||||| |  |||| || ||| |||||||||||||| ||||    
T  4579090 cggactaggcaagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgtta 4579188  T
Q  598 cttattt 604  Q
    |||||||    
T  4579189 cttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 588
Target Start/End: Complemental strand, 14755237 - 14755147
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaa 588  Q
    |||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||| |||||| ||| ||| | |||||||| ||||||    
T  14755237 cggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtctaaacaa 14755147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 500 - 604
Target Start/End: Original strand, 9245174 - 9245279
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||| |||||| ||||||||| ||||||| ||| || |||| ||||||||||||||| | ||||| || ||||||  |||||||||| |||||    
T  9245174 ggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttac 9245273  T
Q  599 ttattt 604  Q
    ||||||    
T  9245274 ttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 524 - 726
Target Start/End: Complemental strand, 17191284 - 17191085
Alignment:
Q  524 tttatcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgt-aagttgacaatat 620  Q
    ||||||||||||||||||  ||||||||||||||||||||||| || || || |||| ||| ||| |||| |||||| |||||| | |||||    ||      
T  17191284 tttatcaagtaataaagttagtaagtagagtatcgtatccataggggttgtcctttcatccgaacgattctcgttacgtatttttttaagtttg--atgg 17191187  T
Q  621 aataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
     ||||||| ||   |||||||||||||||||||| ||||||||| | ||||| ||||||| |||||||||||| ||| || | | |||||||||| |||     
T  17191186 tataaaag-ta---gttgcaatttttatctgtttccaacagagcgattttacctgtttttggttgcagaaaagaaagtagtgattaggattcttcaaatg 17191091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 23093306 - 23093363
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatc 560  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtgtaagtagagtattgtatc 23093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 636 - 732
Target Start/End: Original strand, 140255 - 140349
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||| ||||||||||||||||||||||||||| |||| || |||| |||||||||| || || |||||||||||||||| ||||||| |||| ||||    
T  140255 ttgccatttttatctgtttgcaacagagcaag-ttacctg-ttttagttgcagaaatgttagtagcggtcaggattctttgaatcccttctacttat 140349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 558
Target Start/End: Complemental strand, 5047489 - 5047434
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgta 558  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgtaagtagattatcgta 5047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 13277523 - 13277719
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataata 624  Q
    ||||||||||| |||| ||| |||||||||||||||| | ||||| || |||||||| ||||||||  |||| ||||||| ||||||| |  |    |||    
T  13277523 atcaagtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagttta--acggtata 13277620  T
Q  625 aaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||| ||  ||||||||||||||||||||||| | ||||| | || || ||||||  |||| ||||||||||| |||| | ||||||||| |||||||||    
T  13277621 aaagtta--ggttgcaatttttatctgtttgctatagagcgaattgacctgttttg-gttgtagaaaagtaagtagcgattaggattctttgaatcccct 13277717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 562
Target Start/End: Original strand, 2953582 - 2953628
Alignment:
Q  516 ccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2953582 ccaaatcgtttatcaaataataaagtgtaagtagagtatcgtatcca 2953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 5797493 - 5797567
Alignment:
Q  489 taatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcgtatcca 562  Q
    ||||||||  ||||||||||||||||| ||||||| ||| |||||||||||||  ||||||||||||||||||||    
T  5797493 taatgatggtcggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatcca 5797567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 18495365 - 18495471
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| ||||||||| |||| |||||  ||||||||||||| |||||| ||||  ||||||||  ||||| |||||||||| |||||||| | ||||    
T  18495365 cggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatttgtgtta 18495464  T
Q  598 cttattt 604  Q
    |||||||    
T  18495465 cttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 607
Target Start/End: Original strand, 1587673 - 1587782
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||| ||||||||||||||||  ||||| ||||||| ||| ||||||||| |||| | |  |||  | ||||| ||||||||||||||||||    
T  1587673 cggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgtta 1587772  T
Q  598 cttattttgt 607  Q
    | ||||||||    
T  1587773 cctattttgt 1587782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 4449000 - 4449195
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    |||||||||||||||| |||||| ||||| ||||||| | ||| | || ||| |||||||||||||  |||||||||||| ||||||| |||  |||||     
T  4449000 atcaagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttatttttgtaagtttgacggtataa- 4449098  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
      ||| ||  ||||| |||||||||||||||||| |||||| | ||||| | ||||  |||||| |||||||| ||||||| || |||||| ||||||||    
T  4449099 --aag-ta--ggttgaaatttttatctgtttgcagcagagcgaatttacctattttg-gttgcaaaaaagtaaacagcggttagaattctttgaatcccc 4449192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 15303723 - 15303666
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatc 560  Q
    |||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  15303723 ttagacaagtgtaccaaatcgtttaccaggtaataaagtgtaagtaaagtatcgtatc 15303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 636 - 704
Target Start/End: Complemental strand, 16297794 - 16297727
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    ||||||||||||| |||||||||||||| ||| |||| | ||||| |||||||||||||||||||||||    
T  16297794 ttgcaatttttatatgtttgcaacagagtaag-ttacctatttttggttgcagaaaagtaagcagcggt 16297727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 4258988 - 4258921
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggatt 570  Q
    |||| |||||||| ||||||||||| ||| ||||||| ||||| ||||||||||||||||||| ||||    
T  4258988 ttagacaagtgtaacaaatcgtttaccaaataataaaatgtaactagagtatcgtatccataatgatt 4258921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 507 - 562
Target Start/End: Complemental strand, 9866639 - 9866584
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||    
T  9866639 gcaagtgtaccaaattgtttaccaaataataaagtgtaagtagagtatcatatcca 9866584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 10648570 - 10648677
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| |||  || ||||||||||| |||||||||||||| ||| ||||||||| ||| |  | ||||| ||||||| || |||||||||| ||||    
T  10648570 cggattaggaaagcatatcaaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgtta 10648669  T
Q  598 cttatttt 605  Q
    ||||||||    
T  10648670 cttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 722
Target Start/End: Complemental strand, 13289381 - 13289294
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
    |||||||||||| ||||||||||| || || | ||||| ||||||| ||||||||||| |||  |||||| || ||||||||||||||    
T  13289381 gttgcaatttttttctgtttgcaatagtgcgaatttacctgtttttggttgcagaaaattaataagcggttagaattcttcgaatccc 13289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 9916562 - 9916664
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||| ||||||||| |||| || ||||||||||  |||||||||||||||||||| | ||||| | |||||  |||||||||  | ||||||||    
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttactta 9916661  T
Q  602 ttt 604  Q
    |||    
T  9916662 ttt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 9924474 - 9924576
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||| ||||||||| |||| || ||||||||||  |||||||||||||||||||| | ||||| | |||||  |||||||||  | ||||||||    
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttactta 9924573  T
Q  602 ttt 604  Q
    |||    
T  9924574 ttt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 21912587 - 21912481
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||| ||||||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||| |   ||||| |||||||  | ||||||| | |||||    
T  21912587 cggatcaggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatctacggggattgtcgtttcaacaaaacaatccacgtta 21912488  T
Q  598 cttattt 604  Q
    |||||||    
T  21912487 cttattt 21912481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 330 - 432
Target Start/End: Complemental strand, 27470314 - 27470212
Alignment:
Q  330 agtatcataaatataagaatcaccattagaggaatcattttcagtacatacctccagcttaggccattgcagttgtttctgaagcagatcaagtttattt 429  Q
    |||||||||||| |||||||| | | ||||||| || ||| |||||||||||||| | | |||| | ||||||||||| || ||||| ||| ||||||||    
T  27470314 agtatcataaatttaagaatcgcgaatagaggagtcctttccagtacatacctccggttcaggcaactgcagttgtttttggagcagttcatgtttattt 27470215  T
Q  430 ctt 432  Q
    |||    
T  27470214 ctt 27470212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 2453729 - 2453830
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    |||||||||||||  |||| ||||||||||||||||| | ||||||||||||||||| || |  |||||| ||| |  | | |||||||| |||||||||    
T  2453729 ttaggcaagtgtattaaattgtttatcaagtaataaaatttaagtagagtatcgtattcacatagattattgttccaactagacaattcgtgttacttat 2453828  T
Q  603 tt 604  Q
    ||    
T  2453829 tt 2453830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 653 - 735
Target Start/End: Original strand, 4818995 - 4819078
Alignment:
Q  653 ttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcg--gtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| |||||||||| || | ||||| |||||||||||||||||||||  || |||||||||||||||||  |||||||||||    
T  4818995 ttgcaatagagcaagtt-acctatttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt 4819078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 500 - 604
Target Start/End: Original strand, 9261197 - 9261302
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||| | |||| ||||||||| ||||||| ||| || |||| ||||||||||||||||| ||||| || ||||||  |||||||| | ||| |    
T  9261197 ggattaggcaactttacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttcgtttaaacaatttgtgttgc 9261296  T
Q  599 ttattt 604  Q
    ||||||    
T  9261297 ttattt 9261302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 640 - 732
Target Start/End: Original strand, 17829712 - 17829801
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||||||||||||||||| |||||| |||   |||| |||| |||||| ||||||| ||| | |||||||||||||||| ||||||||    
T  17829712 aatttttatctgtttgcaacagaacaagttaact--gttttggttggagaaaattaagcagtggttaagattcttcgaatcccc-ctatttat 17829801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 18661590 - 18661655
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggatta 571  Q
    ||||||||||||||||||||| |||  ||||||||| |||||||||||| ||||||| ||||||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatta 18661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 605
Target Start/End: Complemental strand, 3191147 - 3191059
Alignment:
Q  518 aaatcgtttatcaagtaataaagtgtaa-gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||||||||||  |||||||||||| || ||| |||||  |||| ||| ||||| ||||||||||||||||||||| |||| |||||||    
T  3191147 aaatcgtttatttagtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttatttatttt 3191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 588
Target Start/End: Complemental strand, 8313488 - 8313412
Alignment:
Q  513 gtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaa 588  Q
    |||| ||||| |||| |||||||||||||| |||||||| ||||||||||| | ||||| |||||||||| ||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaa 8313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 735
Target Start/End: Complemental strand, 9731587 - 9731490
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||| | || |||| |||||||| || ||||||| |||||| |||||||||||||||| ||| ||  |||||| ||| |||||||||||    
T  9731587 ttgcaatttttatctatgtgtaacatagcaagtt-acctgtttttggttgcataaaagtaagcagcggttagggttgatcgaat-cccactatttatatt 9731490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 500 - 605
Target Start/End: Original strand, 1872778 - 1872884
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||  ||||||||| |  |||||||| | || |||||||||||||||||||| |    || ||||||| | ||||||||||| |||||    
T  1872778 ggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgttac 1872877  T
Q  599 ttatttt 605  Q
    |||||||    
T  1872878 ttatttt 1872884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 560
Target Start/End: Complemental strand, 4901971 - 4901921
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatc 560  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||| ||||    
T  4901971 agtgtatcaaatcttttatcaagtaataaagtgtgagtagagtatcatatc 4901921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 507 - 560
Target Start/End: Original strand, 9890183 - 9890237
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcgtatc 560  Q
    |||||||||| |||||||||| | ||||||||||| |||||||||||||||||||    
T  9890183 gcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtatc 9890237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 12391181 - 12391283
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||| || | | ||| |||||||  || ||  ||||| ||||||||    
T  12391181 ttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgtttcaaccgaatgattcgtgttactta 12391280  T
Q  602 ttt 604  Q
    |||    
T  12391281 ttt 12391283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 732
Target Start/End: Complemental strand, 8313352 - 8313259
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||||||||||||| ||||||||||||||  ||   |||| |||||||||||||||||| |  | |||| |||| |||||||| ||||||||    
T  8313352 ttgcaatttttatctgttttcaacagagcaagttaccta--ttttggttgcagaaaagtaagcaacatttaggactcttggaatcccc-ctatttat 8313259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 669
Target Start/End: Complemental strand, 14195932 - 14195899
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtt 669  Q
    ||||||||||||||||||||||||||||||||||    
T  14195932 ttgcaatttttatctgtttgcaacagagcaagtt 14195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 609
Target Start/End: Original strand, 9078185 - 9078269
Alignment:
Q  525 ttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaa 609  Q
    ||||||||||||| | |||||||||| ||||||||||| | |||||||||||    | || ||||| ||||||||||||| ||||    
T  9078185 ttatcaagtaatagaatgtaagtagattatcgtatccacagggattatcgttcaaactaagcaatttgcgttacttatttggtaa 9078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 719
Target Start/End: Complemental strand, 8293997 - 8293920
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaat 719  Q
    |||||||||||||||||||||||||||| |||| || |||| |||||||||| ||  |||| ||| ||||||||| ||||    
T  8293997 aatttttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgttcgcagtggttaggattctttgaat 8293920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 604
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  530 aagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||||| |||||| ||||| ||||||| | ||||| |||||||||| ||||||||   |||||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 703
Target Start/End: Original strand, 1587821 - 1587884
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
    ||||||||||||| ||||||||||||||||||||  |    | || ||||||||||||||||||||||    
T  1587821 ttgcaatttttatttgtttgcaacagagcaagttacc----tcttggttgcagaaaagtaagcagcgg 1587884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 492 - 542
Target Start/End: Original strand, 1814100 - 1814150
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg 542  Q
    |||||||  |||||||||||||||||||||  |||| ||||||||||||||    
T  1814100 tgatgtgttgattaggcaagtgtaccaaattatttaccaagtaataaagtg 1814150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 669
Target Start/End: Original strand, 10648717 - 10648750
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtt 669  Q
    ||||||||||||||||||||||||| ||||||||    
T  10648717 ttgcaatttttatctgtttgcaacaaagcaagtt 10648750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 20174568 - 20174621
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcg 556  Q
    |||| ||||| ||||||||||||||  | |||||||||||||| ||||||||||    
T  20174568 ttagacaagtataccaaatcgtttactaggtaataaagtgtaactagagtatcg 20174621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 560
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatc 560  Q
    ||||||||||| ||||  ||||||||||||| ||||||||||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 4e-68; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 492 - 735
Target Start/End: Original strand, 17359147 - 17359398
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||| |||| |||||||||||||| ||||    
T  17359147 tgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataatt 17359246  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttg 682  Q
    | ||||||||||||| || |||||| ||||||||||||||||||        ||||||||||||||||| | |||||| ||||| ||||| ||||||| |    
T  17359247 ctcgttacttatttt-taggttgacgatataataaaagataagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttgg 17359345  T
Q  683 ttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||||||||||||    
T  17359346 ttgcataaaagtaagatgcggttaggattcttcgaatcccctctatttatatt 17359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 492 - 735
Target Start/End: Original strand, 21449074 - 21449314
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  21449074 tgatgtgcggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatt 21449173  T
Q  591 cgcgttactta-ttttgtaag-ttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
       |||||||| ||||||||| |||||  |   ||||||||||  |||| |||||||||||||||||||||| ||||||||||  ||||||| | |||||    
T  21449174 tatgttacttatttttgtaagtttgacggt---ataaaagata--ggtt-caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcag 21449267  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||||||||| |||||||||||||||||  || ||||||||    
T  21449268 aaaagtaagcagcggttaggattcttcgaatccctcctgtttatatt 21449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 506 - 735
Target Start/End: Original strand, 12208600 - 12208838
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||| |||| |||||| | ||||| |||||||||||||||||||||||||||||| ||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattt 12208699  T
Q  604 ttgtaagttgacaatata----ataaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    |||||||||||| |||||    |||||||    | || |||| || |||| |||||||||||||||||||||||||| || |||| | ||||||||||||    
T  12208700 ttgtaagttgacgatataaaagataaaagggttagaaaggtttcagttttaatctgtttgcaacagagcaagtttacctg-ttttagctgcagaaaagta 12208798  T
Q  696 agcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  12208799 agcagcggttaggattcttcgaatcccccctatttatatt 12208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 500 - 735
Target Start/End: Original strand, 9401502 - 9401742
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||| ||||||||||| ||||| || ||||||||||  ||||||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  9401502 ggattaggca-gtgtaccaaatagtttaccaggtaataaagt--aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttact 9401598  T
Q  600 ta-ttttgtaagttgacaatataataaaagata--------agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
    || ||||||||||||   |||||||||||||||        || ||||||||||||||||||||||||||||| |||||||| || |||| ||| || ||    
T  9401599 tatttttgtaagttgttgatataataaaagataacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctg-ttttggttacaaaa 9401697  T
Q  691 aagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||    
T  9401698 aagtaagtagcggttaggattcttcgaatcccctctatttatatt 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 506 - 720
Target Start/End: Original strand, 29242518 - 29242728
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||| ||||||||||||||||||| |||||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T
Q  605 t-gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
    | |||||||||| ||||||   ||| ||  ||||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||| |||||    
T  29242618 ttgtaagttgacgatataa---aagtta--ggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagtaagaagcgg 29242711  T
Q  704 tcaggattcttcgaatc 720  Q
    | ||||| ||| |||||    
T  29242712 ttaggatactttgaatc 29242728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 508 - 735
Target Start/End: Complemental strand, 17610354 - 17610118
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| ||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattttt 17610255  T
Q  606 gtaag-ttgacaatataa---taaaag---ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    ||||| ||||| ||||||   | ||||   | || | ||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  17610254 gtaagtttgacgatataaaagttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcagaaaagtaagc 17610155  T
Q  699 agcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| ||||||||| ||| |||| || ||||||||    
T  17610154 agcggttaggattctttgaaacccccctttttatatt 17610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 509 - 735
Target Start/End: Complemental strand, 31236145 - 31235911
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgt 607  Q
    ||||||||| |||||||||  ||||||||||||| |||| |||||||  |||| | || |||| |||||| ||||||| ||||||||||||||||||| |    
T  31236145 aagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttatttt-t 31236047  T
Q  608 aagttgacaatataataaaagataagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    |||||||| ||||||||||| |||||||||        ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  31236046 aagttgacgatataataaaatataagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaagca 31235947  T
Q  700 gcggtcaggattcttcgaatcccctctatttatatt 735  Q
     |||| | ||||||| |||| |||||||||||||||    
T  31235946 acggttaagattctttgaattccctctatttatatt 31235911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 506 - 726
Target Start/End: Complemental strand, 18736340 - 18736123
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| | ||||| ||||||||| |||||||||  ||||||||||||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattt 18736241  T
Q  605 t-gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
    | ||| ||||||  |||||   ||  ||  |||||||| |||||||||||||||| ||||||||||||| | ||||| |||||||||||||| |||||||    
T  18736240 ttgtaggttgacggtataa---aattta--ggttgcaaattttatctgtttgcaatagagcaagtttacctatttttggttgcagaaaagtaggcagcgg 18736146  T
Q  704 tcaggattcttcgaatcccctct 726  Q
    | |||||||||||||||||||||    
T  18736145 taaggattcttcgaatcccctct 18736123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 506 - 723
Target Start/End: Complemental strand, 15544066 - 15543841
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||     ||| ||||||||||||||||||||| |||||||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T
Q  605 tgt-aagttgacaatataataaaagataagggtt---------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
    | | || ||||| ||||||   ||||||||||||         ||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||    
T  15543966 ttttaatttgacgatataa---aagataagggttaaaagagttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagt 15543870  T
Q  695 aagcagcggtcaggattcttcgaatcccc 723  Q
    ||||| |||| ||||||||||||||||||    
T  15543869 aagcaacggttaggattcttcgaatcccc 15543841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 506 - 712
Target Start/End: Complemental strand, 25405730 - 25405516
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||| ||||||| |||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||| ||| ||||||||| ||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T
Q  604 ttgtaagttgacaatataa---taaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaa 696  Q
    |||||||||||| ||||||   |  |||    | || | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25405630 ttgtaagttgacgatataaaagtttaagggttagaaagcttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcag-aaagtaa 25405532  T
Q  697 gcagcggtcaggattc 712  Q
    |||||||| |||||||    
T  25405531 gcagcggttaggattc 25405516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 510 - 712
Target Start/End: Original strand, 16179010 - 16179220
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgt 607  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||   ||||||||||||||||||||  |||||||| ||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgt 16179109  T
Q  608 aagttgacaatataataaaagataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    |||||||| ||   |||||| |||||||         |||||||||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||    
T  16179110 aagttgacgat---ataaaatataagggttagatgtcttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaagtaagc 16179206  T
Q  699 agcggtcaggattc 712  Q
    |||||| |||||||    
T  16179207 agcggttaggattc 16179220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 506 - 726
Target Start/End: Complemental strand, 21988082 - 21987865
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||     |||| || |||||||||| |||||||||||||||||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattt 21987983  T
Q  605 t-gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
    | ||||| ||||  |||||   ||| ||  ||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  21987982 ttgtaagctgacggtataa---aagtta--ggttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaagtaagcagcgg 21987888  T
Q  704 tcaggattcttcgaatcccctct 726  Q
    | ||||||||| |||| ||||||    
T  21987887 taaggattctttgaataccctct 21987865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 524 - 726
Target Start/End: Complemental strand, 16917016 - 16916817
Alignment:
Q  524 tttatcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg-taagttgacaatat 620  Q
    ||||||||||||||||||  ||||||||||||||||||||| | ||||| || |||||||| |||||||| |||||||||||||  || ||||||  |||    
T  16917016 tttatcaagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttttataggttgacggtat 16916917  T
Q  621 aataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    ||   ||| ||   |||||||||||||||| ||||||||||||| | ||||| ||||||| ||||||||||||||||||||||  |||||||||||||||    
T  16916916 aa---aagtta---gttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatc 16916823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 502 - 602
Target Start/End: Original strand, 21847629 - 21847729
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| | ||||| |||||||||||||||||||| |||||||||    
T  21847629 attaggcaagtgtaccaaatcgtttaccaagtaataaagtctaagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttactta 21847728  T
Q  602 t 602  Q
    |    
T  21847729 t 21847729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 500 - 732
Target Start/End: Complemental strand, 23038117 - 23037876
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | ||||| |||||||||| |||||| || ||||||    
T  23038117 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttac 23038019  T
Q  599 ttattttgtaag-ttgacaatataataaa--agataagggttg--------caatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    ||||||  |||| ||||  ||| ||||||  |||||| |||||        |||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  23038018 ttattt--taagtttgatgataaaataaaagagataatggttgagaaattacaatttttttctgtttgcaacatagcaag-ttacttgtttttggttgca 23037922  T
Q  688 gaaaagtaagcagcggt--caggattcttcgaatcccctctatttat 732  Q
    |||| |||| ||| |||   |||||||||||||||||| ||||||||    
T  23037921 gaaatgtaa-cagtggttagaggattcttcgaatcccccctatttat 23037876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 492 - 604
Target Start/End: Complemental strand, 13345450 - 13345337
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||| ||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||| | ||||| |||||| ||||||||||||    
T  13345450 tgatgtgtggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 13345351  T
Q  591 cgcgttacttattt 604  Q
    ||||||||||||||    
T  13345350 cgcgttacttattt 13345337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 720
Target Start/End: Complemental strand, 15813261 - 15813032
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||    
T  15813261 cggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgtta 15813163  T
Q  598 cttattttgtaagttgacaatataataaa-agataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||||  ||| ||||| ||| |||||| |||||||||         ||||||||||||| ||||| ||||| |||||| |||| ||| |||  |||||    
T  15813162 cttattt--taatttgacgataaaataaagagataagggttaagaggtttgcaatttttatatgtttccaacatagcaag-ttacctgtctttgcttgca 15813066  T
Q  688 gaaaagtaagcagcggtcag--gattcttcgaatc 720  Q
     |||||||| ||||||||||  |||||||||||||    
T  15813065 aaaaagtaa-cagcggtcagatgattcttcgaatc 15813032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 3591760 - 3591654
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |  |||| |||||| ||||||||||||||| |||    
T  3591760 cggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgcctta 3591661  T
Q  598 cttattt 604  Q
    |||||||    
T  3591660 cttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 724
Target Start/End: Complemental strand, 21666685 - 21666482
Alignment:
Q  529 caagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagttgacaatataataaa 626  Q
    |||||||||||||| |||||||||||||||||||| | ||||| || ||||||||||||||||| ||||||||| |||| ||||||||| ||   |||||    
T  21666685 caagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgat---ataaa 21666589  T
Q  627 agataagggtt----------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcg 716  Q
    |||||||||||          | ||||||||||||||||||| | | ||||||||| || |||| |||| |||||||||||||  ||| |||||||||||    
T  21666588 agataagggttaaaaagactagtaatttttatctgtttgcaagacaacaagtttacctg-ttttggttgtagaaaagtaagcaatggttaggattcttcg 21666490  T
Q  717 aatcccct 724  Q
    ||||||||    
T  21666489 aatcccct 21666482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 502 - 721
Target Start/End: Original strand, 22664201 - 22664429
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||||   ||||| || ||||||| |||||| ||||||| |||    
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgctt 22664300  T
Q  601 attttgtaagttgacaatat--aataaa--agataaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    ||||  ||||||||| ||||  ||||||  |||||||||        ||||||||||||| |||||| ||||||||||| |||| || |||| |||||||    
T  22664301 attt--taagttgacgatataaaataaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaag-ttacatg-ttttggttgcag 22664396  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcc 721  Q
    ||||||||| |||||| |||| |||| ||||||    
T  22664397 aaaagtaagtagcggttaggactctttgaatcc 22664429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 506 - 699
Target Start/End: Original strand, 14779564 - 14779766
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    ||||||||||||||||| |||| |||||||||| ||| ||| ||||||||| |||||| | ||||| ||||||||||||||||  |||||||| ||| ||    
T  14779564 ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttattt 14779663  T
Q  604 ttgtaagttgacaatataa-----taaaag---ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    |||||||||||| ||||||      |||||   | |||||||||||||||||| ||||| ||||| | |||||||||||| |||| |||| |||||||||    
T  14779664 ttgtaagttgacgatataaaaaagaaaaaggttagaagggttgcaatttttatttgtttacaacatatcaagtttacttg-ttttggttgaagaaaagta 14779762  T
Q  696 agca 699  Q
    ||||    
T  14779763 agca 14779766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 527 - 728
Target Start/End: Complemental strand, 14781932 - 14781735
Alignment:
Q  527 atcaagtaataaagt-gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    ||||||||||||||| ||||||||||||||||||||| ||| ||| || |||||||| || |||||  | |||||||||| ||||||| ||||| |        
T  14781932 atcaagtaataaagtagtaagtagagtatcgtatccacaagaattgtcctttcgtccgaaaaattctagatacttatttttgtaagtttgacaaga---- 14781837  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||  ||   |||||||||||||| |||||||| |||||||| ||||| ||||||| ||||||||||||| | |||| || ||||||||||||||||||    
T  14781836 aaaaagta---gttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttaggattcttcgaatcccc 14781740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 26540892 - 26540993
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| || |  | | |||||| |||||||||||    
T  26540892 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatcattccaactagacaatttgcgttacttat 26540991  T
Q  603 tt 604  Q
    ||    
T  26540992 tt 26540993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 489 - 605
Target Start/End: Complemental strand, 15813642 - 15813524
Alignment:
Q  489 taatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg--taagtagagtatcgtatccataaggattatcgtttcgtccaaac 586  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||   ||||||||||| ||||||| ||||||| ||||||| |  ||||    
T  15813642 taatgatgtgcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaac 15813543  T
Q  587 aattcgcgttacttatttt 605  Q
    |||||| ||||||||||||    
T  15813542 aattcgtgttacttatttt 15813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 17837509 - 17837615
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| |||||| ||||||| || ||| ||| |||||||||||||||    
T  17837509 cggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgtta 17837608  T
Q  598 cttattt 604  Q
    |||||||    
T  17837609 cttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 506 - 726
Target Start/End: Original strand, 18825655 - 18825871
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||| ||||| | |||||||||||||| |||||| ||||||||||||| |||| || || ||| || | |||||||  ||||||||| ||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccacaagggttgtcctttagttcgaacaattttcgttacttaatt 18825753  T
Q  604 ttgtaagtt-gacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcg 702  Q
    || |||||| ||| ||| ||   ||| ||||  ||||||||||||||||||| ||||| ||||| |||||||| |||| |||| ||||||||||||||||    
T  18825754 ttataagtttgacgatacaa---aagttaag--ttgcaatttttatctgtttacaacaaagcaaatttacttg-ttttggttgtagaaaagtaagcagcg 18825847  T
Q  703 gtcaggattcttcgaatcccctct 726  Q
     | ||||||||| |||||||||||    
T  18825848 ataaggattctttgaatcccctct 18825871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 502 - 622
Target Start/End: Original strand, 24281272 - 24281391
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||||||| |||| |||||| | ||||||||||||  ||| ||||||| |||||||||    
T  24281272 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttactt 24281371  T
Q  601 attttgtaagttgacaatataa 622  Q
    ||||  ||||||||||||||||    
T  24281372 attt--taagttgacaatataa 24281391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 506 - 724
Target Start/End: Original strand, 727466 - 727681
Alignment:
Q  506 ggcaagtgtaccaaatcgttt-atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-t 602  Q
    |||||||||||||  |||||| |||||||||||||||| |||||||||||||| ||||| ||||||||   |||||||| ||||||||  |||||||| |    
T  727466 ggcaagtgtaccag-tcgtttcatcaagtaataaagtgataagtagagtatcgcatccacaaggattactctttcgtccgaacaattcttgttacttatt 727564  T
Q  603 tttgtaag-ttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagc 701  Q
    ||||| || ||||| ||   ||||||||||  ||||||||||||||| ||||||||||| || || ||||| || |||| ||||||||||   |||||||    
T  727565 tttgttagtttgacgat---ataaaagata--ggttgcaatttttatttgtttgcaacatagaaaatttacctg-ttttggttgcagaaagtaaagcagc 727658  T
Q  702 ggtcaggattcttcgaatcccct 724  Q
    ||| | |||||||||||||||||    
T  727659 ggttaagattcttcgaatcccct 727681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 9787986 - 9787879
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||   ||| |||||||||| |||||| ||   |||    
T  9787986 cggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaactccaatta 9787887  T
Q  598 cttatttt 605  Q
    ||||||||    
T  9787886 cttatttt 9787879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 16787833 - 16787726
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||| | | |||||||||||||||||||||||||| ||||||||||||||||| || |  |||| |||||| | |||||||||| ||||||    
T  16787833 cggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgtta 16787734  T
Q  598 cttatttt 605  Q
    ||||||||    
T  16787733 cttatttt 16787726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 506 - 723
Target Start/End: Complemental strand, 21334819 - 21334592
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    ||||| |||| |||||| ||||||||||||||||||| |||||| ||||||||||||  | | ||| || |||| |||||||||||| ||||||||| ||    
T  21334819 ggcaaatgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttattt 21334720  T
Q  604 ttgtaagttgacaatata----ataaaagat----aagggttgcaa-tttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
    || ||||||||| |||||    ||||| | |    |||  || ||| ||||||||||||||||| | |||||| |||| | ||||| |||| ||||||||    
T  21334719 ttttaagttgacgatataaaagataaatggtttgaaagtcttacaattttttatctgtttgcaaaatagcaag-ttacctatttttggttgaagaaaagt 21334621  T
Q  695 aagcagcggtcaggattcttcgaatcccc 723  Q
    || ||||||| ||||||||||||||||||    
T  21334620 aaacagcggttaggattcttcgaatcccc 21334592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 24306412 - 24306307
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| | |||||  ||||||  ||||| |||||||||||    
T  24306412 cggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggatt-gcgtttcaaccaaataattcgcgtta 24306314  T
Q  598 cttattt 604  Q
    |||||||    
T  24306313 cttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 629
Target Start/End: Complemental strand, 51473978 - 51473854
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||||| || |||||||||||||||| |  ||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttactt 51473881  T
Q  601 attttgtaagttgacaatataataaaaga 629  Q
     |||  | ||| ||||||| |||||||||    
T  51473880 gttt--ttagtcgacaataaaataaaaga 51473854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 570
Target Start/End: Complemental strand, 17121584 - 17121515
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggatt 570  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17121584 gattagacaagtgtatcaaattgtttatcaagtaataaagtgtaagtagagtatcatatccataaggatt 17121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 636 - 728
Target Start/End: Original strand, 22623029 - 22623120
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctat 728  Q
    |||| |||||||| | ||||||||||||||||||||| ||||||  |||||||||||||||||||| || |||||||||| ||||||||||||    
T  22623029 ttgccatttttatatatttgcaacagagcaagtttacctgttttg-gttgcagaaaagtaagcagctgttaggattcttcaaatcccctctat 22623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 500 - 602
Target Start/End: Complemental strand, 12012906 - 12012803
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||| | | ||| ||||||  || |||| |||||||||||    
T  12012906 ggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactattcgcgttac 12012807  T
Q  599 ttat 602  Q
    ||||    
T  12012806 ttat 12012803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 732
Target Start/End: Original strand, 33190669 - 33190909
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| || ||||||||||||||||||||||||||||| || ||||||||||||  |||||| ||  ||| ||||||| || |||||| ||| ||||    
T  33190669 cggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgtta 33190768  T
Q  598 cttattttgtaagttgacaatat--aataaa--agataag-------ggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||||||| ||||  ||||||  || ||||       | ||| ||||||||| |||||||||||| |||||||  || |  |||  ||||    
T  33190769 cttattt--taagttgacgatataaaataaaatagttaaggtttagagattgtaatttttatttgtttgcaacagtgcaagttacctgg--tttgattgc 33190864  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||||||||||||| ||||||||| | || ||||||||||||    
T  33190865 agaaaagtaagcagcggttaggattctttggat-ccctctatttat 33190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 640 - 726
Target Start/End: Complemental strand, 16069518 - 16069433
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    |||||||||||| |||||||||||||||||||| || |||| |||| ||||||||||||||| || |||||||||||||| ||||||    
T  16069518 aatttttatctgcttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagcagttaggattcttcgaataccctct 16069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 605
Target Start/End: Complemental strand, 26649075 - 26648971
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||| |||||||| ||||||||||| ||||||||||| || ||||| || ||| ||||||| | ||||||||||||||||||||||| |||||||| |    
T  26649075 gattagacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaactcgcgttatt 26648977  T
Q  600 tatttt 605  Q
    ||||||    
T  26648976 tatttt 26648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 603
Target Start/End: Complemental strand, 27117825 - 27117720
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||| || | | ||| |||||||  |||||||||  ||||||    
T  27117825 cggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatctgcgtta 27117726  T
Q  598 cttatt 603  Q
    ||||||    
T  27117725 cttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 16359865 - 16359969
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||| | | | | ||||||| ||||| ||| |||||| |||     
T  16359865 gattaggcaagtgtaccaaatcgtttaccaagtaataaaatgtaagtatagtattgtatccacatgtactgtcgtttcatccaatcaactcgcgtcacta 16359964  T
Q  601 atttt 605  Q
    |||||    
T  16359965 atttt 16359969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 23179817 - 23180012
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataa 622  Q
    |||||||||||||||  |||| ||||||||| |||||| | ||||| || |||||||| |||||||| ||||| ||||||| ||||||| |||  |||||    
T  23179817 atcaagtaataaagttagtaaatagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttatttttgtaagtttgacggtataa 23179916  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
       ||| ||   |||||||||||||||||||| ||| | | ||| ||||| | ||||| |||| |||||||||||||||||| |||||| ||||||||||    
T  23179917 ---aag-ta---gttgcaatttttatctgtttacaaaataacaattttacct-tttttggttggagaaaagtaagcagcggtaaggattattcgaatccc 23180008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 636 - 732
Target Start/End: Original strand, 28008244 - 28008338
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||||||||||||| ||| ||||||| || |||||||||  ||||||||||||||||||||||| ||||||||| ||||| || ||||||||    
T  28008244 ttgcaatttttatctgtttccaatagagcaaatt-acttgttttg-gttgcagaaaagtaagcagcggttaggattctttgaatctcccctatttat 28008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 500 - 605
Target Start/End: Original strand, 22620255 - 22620361
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||| |||||  ||||  ||||||||||||| ||| |||||||||||||||||| | ||| || ||||||| ||| ||||| ||||||    
T  22620255 ggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttac 22620354  T
Q  599 ttatttt 605  Q
    |||||||    
T  22620355 ttatttt 22620361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 24267889 - 24267783
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||| |||||| |||||||||||||||| || |||||| |||||| ||||||||  |||| | |||||||| || |||||| |||||    
T  24267889 cggattagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatccatatagattgttgtttcgtctaatcaattcacgtta 24267790  T
Q  598 cttattt 604  Q
    |||||||    
T  24267789 cttattt 24267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 636 - 720
Target Start/End: Complemental strand, 17121460 - 17121378
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    ||||| |||| || ||||||||| |||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  17121460 ttgcatttttcatttgtttgcaatagagcaagtt-acttgttttg-gttgcagaaaagtaagcagcggttaggattcttcgaatc 17121378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 723
Target Start/End: Complemental strand, 18100973 - 18100888
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||||||||||||| |||||| |||| || |||| ||||||||||||||||||||||| | |||| || ||||||||    
T  18100973 ttgcaatttttatctgtttgcaacatagcaag-ttacatg-ttttggttgcagaaaagtaagcagcggttatgattatttgaatcccc 18100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 630 - 732
Target Start/End: Complemental strand, 15807986 - 15807886
Alignment:
Q  630 taagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||  | |||| |||| |||||| ||||||||| | ||||||||| |||||||| |||||    
T  15807986 taaggattgcaatttttatttgtttgcaacagagcaag-ttaccag-ttttggttgtagaaaaataagcagcgattaggattctttgaatccccactatt 15807889  T
Q  730 tat 732  Q
    |||    
T  15807888 tat 15807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 147625 - 147730
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||| |||||||| ||||||||||  |||||||||||||| ||||| ||||||| ||| || | ||||| || ||||||| |||||  ||||||||||    
T  147625 gattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttact 147724  T
Q  600 tatttt 605  Q
    ||||||    
T  147725 tatttt 147730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 732
Target Start/End: Complemental strand, 21973164 - 21973071
Alignment:
Q  638 gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt--caggattcttcgaatcccctctatttat 732  Q
    ||||||||||||||||||||||| | |||| |||| ||||||| ||||||||||||||| |||||||   |||||||||||||||||| ||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatcccc-ctatttat 21973071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 636 - 724
Target Start/End: Complemental strand, 32382968 - 32382882
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||||||||||||||||||||||||  |||| || |||| |||||||||| || |||||| || ||||||||| |||||||||    
T  32382968 ttgcaatttttatctgtttgcaacagagcaa-attacctg-ttttggttgcagaaatgttagcagccgttaggattctttgaatcccct 32382882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 604
Target Start/End: Complemental strand, 24307028 - 24306957
Alignment:
Q  533 taataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||  | || |||||| ||||||||||||    
T  24307028 taataaagtgtaagtagagtatcgtattcatagggattgtcgtttcaactaagcaattcacgttacttattt 24306957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 556
Target Start/End: Complemental strand, 32383102 - 32383047
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcg 556  Q
    |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  32383102 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 601
Target Start/End: Original strand, 22622892 - 22622985
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||||| ||||| | |||||||||||||| | ||||||||||| |||||  | ||||| || ||||||||||| |||||||||||||||    
T  22622892 caagtgtaccaa-tcgttgaccaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttactta 22622985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 652 - 714
Target Start/End: Complemental strand, 25404036 - 25403974
Alignment:
Q  652 tttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattctt 714  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||||||| |||||| |||||||||    
T  25404036 tttgcaacagagcaactttacctgtttttggttccagaaaagtaagtagcggttaggattctt 25403974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 24053999 - 24054194
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt-tgtaagtt-gacaatataat 623  Q
    |||||||||||||||  ||||||||||||| |||||| | ||||| || |||||||  |||||||   ||||||||||| |||||||| |||  |||||     
T  24053999 atcaagtaataaagtaataagtagagtatc-tatccacagggattgtcctttcgtctcaacaatttttgttacttatttatgtaagtttgacggtataa- 24054096  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
      ||||||  | || |||||||||||||||||||||||||| | |||||||| |||| ||||  |||||| ||||  | || ||||||||||||||| ||    
T  24054097 --aagata--gatttcaatttttatctgtttgcaacagagcgaatttacttg-ttttggttgttgaaaagaaagcgacagttaggattcttcgaatctcc 24054191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 576
Target Start/End: Complemental strand, 10064668 - 10064600
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    |||||||||||||||||||| ||||||||||| || | ||||| |||| |||||| ||||||| |||||    
T  10064668 caagtgtaccaaatcgtttaccaagtaataaaatgcaggtagaatatcatatccacaaggattttcgtt 10064600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 723
Target Start/End: Complemental strand, 9787839 - 9787753
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |||||||||| | ||||||||||||||||||| | || ||||||| ||||||||||||||||  ||||| || | |||| ||||||||    
T  9787839 ttgcaattttgaactgtttgcaacagagcaag-tgacctgtttttggttgcagaaaagtaagttgcggttagaactctttgaatcccc 9787753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 639 - 710
Target Start/End: Complemental strand, 18529149 - 18529079
Alignment:
Q  639 caatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggat 710  Q
    |||||||||||  ||||||||||||||||||||| || |||| |||| |||||||||||||| ||| |||||    
T  18529149 caatttttatcaatttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagtggttaggat 18529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 499 - 585
Target Start/End: Original strand, 44795361 - 44795447
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaa 585  Q
    |||||||| |||||||||| || | |||| |||||||||||| | ||||| |||||||||||||| | ||||| ||||||||||||||    
T  44795361 cggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 636 - 732
Target Start/End: Complemental strand, 12012773 - 12012680
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||||||| ||||||||||| ||| |||| || ||||||  |||||| |||||||| || || | |||||||||||||||||| ||||||||    
T  12012773 ttgcaatttttatttgtttgcaacatagcgagtt-acctgttttg-gttgcacaaaagtaaacaacgattaggattcttcgaatcccc-ctatttat 12012680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 687 - 735
Target Start/End: Complemental strand, 13345248 - 13345200
Alignment:
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||| ||||||| |||||| ||||||||||| |||||||||||    
T  13345248 agaaaagtaaacagcggttaggatttttcgaatcccccctatttatatt 13345200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 635 - 699
Target Start/End: Original strand, 18830607 - 18830670
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    |||||||||| |||||||||||||||||| || ||||| || |||| |||||| |||||||||||    
T  18830607 gttgcaatttctatctgtttgcaacagagaaattttacctg-ttttggttgcataaaagtaagca 18830670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 604
Target Start/End: Original strand, 34480964 - 34481067
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||| ||| ||||| |||||||||| |||||||||||||| |||||||| |||  |||||| || || | || |||| ||||||  ||||| |||||||    
T  34480964 attagacaaatgtacaaaatcgtttaccaagtaataaagtgataagtagaatattatatccacaatgactgtcatttcatccaaaacattcgtgttactt 34481063  T
Q  601 attt 604  Q
    ||||    
T  34481064 attt 34481067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 685
Target Start/End: Original strand, 21847772 - 21847820
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttg 685  Q
    ||||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  21847772 ttgcaatttttatttgtttgcaacggagc-agtttacttattttttgttg 21847820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 605
Target Start/End: Original strand, 24214558 - 24214643
Alignment:
Q  521 tcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||| |||||||||||||| |||||| ||||  ||||||| | ||||| | |||||||| |||||| |  |||||||||||||    
T  24214558 tcgtttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttatttt 24214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 25958105 - 25958206
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    ||||| |||||||  ||||||||||  ||||||| |||||||| ||||||||| |||||| | ||||| ||||| |  ||| ||||||   |||||||||    
T  25958105 ttaggaaagtgtattaaatcgtttacaaagtaatgaagtgtaaatagagtatcatatccacatggattgtcgttccaaccagacaatttatgttacttat 25958204  T
Q  603 tt 604  Q
    ||    
T  25958205 tt 25958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 2e-66; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 492 - 723
Target Start/End: Original strand, 21301903 - 21302144
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| || ||||||||||||||||    
T  21301903 tgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaatt 21302002  T
Q  591 cgcgttactta-ttttgtaagttgacaatataataaaagata--------agggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
    || |||||||| |||||||| ||||| |||||||||||||||        || |||| ||||||||||||||||||||||||||||||||| | |||||     
T  21302003 cgagttacttatttttgtaaattgacgatataataaaagatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttg 21302102  T
Q  682 gttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
     |||||||||| ||| ||||||| ||||||||||||||||||    
T  21302103 attgcagaaaaataaacagcggttaggattcttcgaatcccc 21302144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 492 - 735
Target Start/End: Complemental strand, 16245843 - 16245593
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||| | |||||||| ||||||||||||||||    
T  16245843 tgatgtgcggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaatt 16245744  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaaga--taaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
    | ||||||||||||  ||  ||||||||| |||||||||  ||||||        ||||||||||||||| |||||||||||||||| |||| |||||||    
T  16245743 ctcgttacttattt--tagtttgacaataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaag-ttacctgttttt 16245647  T
Q  681 tgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
     ||||||||||||||||||||||| || ||||| ||||||||| |||||||||||    
T  16245646 ggttgcagaaaagtaagcagcggttagaattctccgaatcccc-ctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 509 - 741
Target Start/End: Complemental strand, 17438527 - 17438287
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-g 606  Q
    ||||||||||||||||| | ||||| ||||| || ||||||||||||| |||||| | ||||| |||||||||||||||||||| ||||||||||||| |    
T  17438527 aagtgtaccaaatcgtt-accaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttg 17438429  T
Q  607 taagtt-gacaatataataaa---agat----aagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    |||||| ||| ||||||||||   || |    || | ||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||    
T  17438428 taagtttgacgatataataaataaaggtttagaaagcttgcaatttttatctgtttgcaacagagcaattttacctgttttg-gttgcagaaaagtaagc 17438330  T
Q  699 agcggtcaggattcttcgaatcccctctatttatattcttcga 741  Q
    | |||| |||||||||||||||||||||||||||||| |||||    
T  17438329 aacggttaggattcttcgaatcccctctatttatattgttcga 17438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 495 - 732
Target Start/End: Complemental strand, 21303465 - 21303220
Alignment:
Q  495 tgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgc 593  Q
    ||||||||||| ||||||||| ||||||||||| ||| ||||||| || |||||||||||||||| ||| || |||| | ||||| |||||||||||  |    
T  21303465 tgtgcggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttcc 21303366  T
Q  594 gttacttattttgtaagttgacaatataa--taaaagat--aagggtt-------gcaatttttatctgtttgcaacagagcaagtttacttgttttttg 682  Q
    ||||||||||||  |||||||| ||||||  |||||||   |||||||       |||||||||||||||||||||||||||||||| |||||||||  |    
T  21303365 gttacttatttt--aagttgactatataaaataaaagagtaaagggttagagattgcaatttttatctgtttgcaacagagcaagtt-acttgttttg-g 21303270  T
Q  683 ttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||||||||||||||||| |||||| || |||||||| ||||||||    
T  21303269 ttgcagaaaagtaagcagcggttaggattatttgaatcccccctatttat 21303220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 492 - 723
Target Start/End: Original strand, 41508352 - 41508591
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||     ||||| |||||| ||||||||||||    
T  41508352 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatt 41508451  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaaga--taaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
     || ||||||||||| ||| ||||| ||| |||||||||  ||||||        ||||||||| ||||||||||||||| |||||| |||| || ||||    
T  41508452 tgcattacttatttt-taatttgacgataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaag-ttacatg-tttt 41508548  T
Q  681 tgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
     ||||||||||||||| ||||||| | ||||||| ||||||||    
T  41508549 ggttgcagaaaagtaaccagcggttaagattctttgaatcccc 41508591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 499 - 722
Target Start/End: Complemental strand, 12805997 - 12805766
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||| | ||||| ||||||| ||||||||||| ||||||    
T  12805997 cggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgtta 12805898  T
Q  598 cttattttgtaagttgac--aatataataaaagat--aaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||| |||   ||| ||||||||||  |||||       |||||||||||||||||||||||||||| ||  |||| ||  ||| |||||    
T  12805897 cttattt--taagtcgacgttataaaataaaagattaaagggttagagattgcaatttttatctgtttgcaacagag-aaaattacctg-atttggttgc 12805802  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
    |||||||||||||| ||| |||||||||||||||||    
T  12805801 agaaaagtaagcaggggttaggattcttcgaatccc 12805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 502 - 696
Target Start/End: Complemental strand, 3116522 - 3116321
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||| |||||| ||||||| | ||||| |||||||||||||||||||| ||||||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactt 3116424  T
Q  601 attttgtaagttgacaatataataaa-agataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
    ||||  ||||||||| ||| |||||| |||||||||         ||||||||||||||||||||||||||||||||  ||| || |||| |||||||||    
T  3116423 attt--taagttgacgataaaataaagagataagggttaagagatttgcaatttttatctgtttgcaacagagcaag-atacctggttttggttgcagaa 3116327  T
Q  691 aagtaa 696  Q
    ||||||    
T  3116326 aagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 506 - 726
Target Start/End: Original strand, 8770019 - 8770235
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||| ||||| | |||||||||||||| |||||| |||||| |||||| | ||||| || ||| |||  ||||||||  |||||||| ||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagtt 8770117  T
Q  604 ttgtaagtt-gacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcg 702  Q
    ||||||||| |||| |||||   ||| ||  ||||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||     
T  8770118 ttgtaagtttgacagtataa---aagtta--ggttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagca 8770211  T
Q  703 gtcaggattcttcgaatcccctct 726  Q
    || |||||||||||||||||||||    
T  8770212 gttaggattcttcgaatcccctct 8770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 499 - 696
Target Start/End: Original strand, 20429702 - 20429908
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||| |||||| |||| ||||| ||||||||||| || |||||||||||||||||| ||||||||| || |||| |||| |||||||||||||    
T  20429702 cggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgtta 20429801  T
Q  598 cttattttgtaag-ttgacaatataataaaaga-taaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||||| |||| ||||| ||||||||||||| ||||||        ||||||||||||| |||||||||||||||||||||| |   |||| ||||||    
T  20429802 cttatttt-taagtttgacgatataataaaagagtaagggttagaagtttgcaatttttatatgtttgcaacagagcaagttta-tctattttggttgca 20429899  T
Q  688 gaaaagtaa 696  Q
    |||||||||    
T  20429900 gaaaagtaa 20429908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 506 - 724
Target Start/End: Original strand, 4650231 - 4650451
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| || |||| |||||||||||||| | |||| ||||||||||||| | ||||| || ||||| |||||||||||||||||||||||     
T  4650231 ggcaagtgtaccaa-tcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt- 4650328  T
Q  605 tgtaagttgacaatataataaaagataagggtt----------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
       |||||||| ||| ||   ||| ||||||||          |||||||||||||||||||||| |||||||||||| || |||| |||||||||||||    
T  4650329 ---aagttgacgatacaa---aagttaagggttaaaaagacttgcaatttttatctgtttgcaacggagcaagtttacctg-ttttggttgcagaaaagt 4650421  T
Q  695 aagcagcggtcaggattcttcgaatcccct 724  Q
    ||||| |||| |||||||||||||||||||    
T  4650422 aagcaacggttaggattcttcgaatcccct 4650451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 501 - 604
Target Start/End: Complemental strand, 21825973 - 21825870
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||| | |||||||||||||| ||||||||||||    
T  21825973 gattaggtaagtgtaccaaatcgtttaccgagtaataaagtgtaagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttactt 21825874  T
Q  601 attt 604  Q
    ||||    
T  21825873 attt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 502 - 732
Target Start/End: Original strand, 5508331 - 5508568
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||  |||||| | ||||| ||||||||||||||||  |||||||||||    
T  5508331 attaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttactt 5508429  T
Q  601 attttgtaagttgacaatataataaa-agataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
    ||||  |||| |||| ||| |||||| |||||||||         ||| ||||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  5508430 attt--taaggtgacgataaaataaagagataagggttaagagatttgaaatttttatctgtttgcaatagagcaag-ttacatgttttttgttgcagaa 5508526  T
Q  691 aagtaagcagcggt--caggattcttcgaatcccctctatttat 732  Q
    |||||| ||| |||   |||||||||||||||||| ||||||||    
T  5508527 aagtaa-cagtggttagaggattcttcgaatcccc-ctatttat 5508568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 527 - 720
Target Start/End: Complemental strand, 16230021 - 16229831
Alignment:
Q  527 atcaagtaataaagt-gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataata 624  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||| || ||| ||||  |||||||  |||||||||||| |||||||    ||   |||    
T  16230021 atcaagtaataaagtagtaagtagagtatcgtatccacagggattgtccttttgtccttacaattctagttacttatttttgtaagtttg--atggtata 16229924  T
Q  625 aaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    |||| ||||  ||||||||||||||||||||||||||||| | ||||| ||||||| |||||| |||||||||||||||| |||||||||||||||    
T  16229923 aaag-taag--ttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 506 - 724
Target Start/End: Original strand, 8765117 - 8765331
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||| ||||||||| ||||| | ||| |||||||||| |||||| ||||||||||||| | ||||| || ||| |||  ||||||||  |||||||| ||    
T  8765117 ggcaggtgtaccaa-tcgttaaccaattaataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttacttagtt 8765215  T
Q  604 ttgtaagtt-gacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcg 702  Q
    ||||||||| |||| |||||   ||| ||  ||||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||     
T  8765216 ttgtaagtttgacagtataa---aagtta--ggttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagca 8765309  T
Q  703 gtcaggattcttcgaatcccct 724  Q
    || | |||||||||||||||||    
T  8765310 gttaagattcttcgaatcccct 8765331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 508 - 657
Target Start/End: Original strand, 22349410 - 22349556
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |   ||| |||||||||||||||||||| | ||||||| ||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T
Q  606 gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgca 657  Q
    ||||||||||| |   ||||||| ||  ||||||||||||||||||||||||    
T  22349510 gtaagttgacagt---ataaaagtta--ggttgcaatttttatctgtttgca 22349556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 527 - 724
Target Start/End: Complemental strand, 12754992 - 12754796
Alignment:
Q  527 atcaagtaataaa-gtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataa 622  Q
    ||||||||||||| ||| ||| |||||||||||||||| || |||| || ||||||   |||||||| | ||||||||||| |||| || |||| |||||    
T  12754992 atcaagtaataaaagtgataattagagtatcgtatccacaatgattgtcctttcgtatgaacaattctctttacttatttttgtaactttgacagtataa 12754893  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
       ||| ||||  || |||||||||| ||||||||||||||| ||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||    
T  12754892 ---aagttaag--tttcaatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatccc 12754798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 491 - 735
Target Start/End: Complemental strand, 2167731 - 2167481
Alignment:
Q  491 atgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaat 589  Q
    ||||||||| |||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| |   | | ||||||||||||||||||    
T  2167731 atgatgtgcagattagacaagtgtaccaaatcg-ttaccaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaat 2167633  T
Q  590 tcgcgttacttattttgtaagttgacaatataataaaaga-ta---------agggttgcaatttttatctgtttgcaacagagcaagtttacttgtttt 679  Q
    || | ||||||||||| ||  ||||| ||| ||||||||| ||         ||  ||||||||||||||||||||||||| | |||| |||| || |||    
T  2167632 tcacattacttatttt-tagtttgactataaaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaag-ttacctg-ttt 2167536  T
Q  680 ttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    | ||||  |||||||||| || ||| |||||||||||||||||| |||||||||||    
T  2167535 tggttgtggaaaagtaagaagtggttaggattcttcgaatcccc-ctatttatatt 2167481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 501 - 724
Target Start/End: Original strand, 21325334 - 21325566
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||| ||||||||||||| ||  ||| ||||||||||||||||||| | ||||||    
T  21325334 gattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttact 21325433  T
Q  600 tattttgtaagttgacaatat--aataaaaga---taaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||  |||||| || ||||  |||||||||    |||||       ||||||||||||||| ||||||||||||||||||  ||    ||| ||||||    
T  21325434 tattt--taagttaacgatataaaataaaagagttgaagggttagagattgcaatttttatctatttgcaacagagcaagttacct--aatttggttgca 21325529  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||| |||||| | ||||||||| |||||||    
T  21325530 gaaaagtaagtagcggttatgattcttcgcatcccct 21325566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 507 - 722
Target Start/End: Original strand, 19908307 - 19908531
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||||||||||| ||| ||||||| || |||||| ||||||||||||| |||| |  |||||||||||||||||||| ||| || ||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctatttt 19908406  T
Q  606 gt---aagttgacaatataataaaagataagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
     |   |  ||||| ||||||   ||| ||||||||        | ||||||||| | ||||||||| ||||||||||| | ||||| |||||||||||||    
T  19908407 ttttcagtttgacgatataa---aagttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaagt 19908503  T
Q  695 aagcagcggtcaggattcttcgaatccc 722  Q
    ||||||| || |||||||||||||||||    
T  19908504 aagcagcagttaggattcttcgaatccc 19908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 639 - 726
Target Start/End: Original strand, 932884 - 932970
Alignment:
Q  639 caatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| ||||||    
T  932884 caatttttatttgtttgcaacagagcaagtttacttg-ttttggttgcagaaaagtaagcagcggttagtattcttcgaattccctct 932970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 635 - 726
Target Start/End: Original strand, 8170008 - 8170099
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    |||| ||||||||||||||||||||| ||| | ||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  8170008 gttgtaatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatcccctct 8170099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 527 - 728
Target Start/End: Original strand, 19167431 - 19167626
Alignment:
Q  527 atcaagtaataaagt-gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagttgacaatataata 624  Q
    ||||||||| ||||| |||| |||||||||||||||| | |||||||| |||||||| ||||||||  |||||||| ||||||||||||||| ||||       
T  19167431 atcaagtaagaaagttgtaaatagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttatttttgtaagttgacagtata--- 19167527  T
Q  625 aaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
        | |  ||||||||||||||||||||||||| | ||| | ||||| | ||||| ||||||| |||||||||| |||| |||||| || ||||||| |    
T  19167528 ----aaattggttgcaatttttatctgtttgcaataaagcgaatttacctatttttggttgcag-aaagtaagcaacggttaggattatttgaatcccat 19167622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 31286121 - 31286017
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||| | ||||| | |||||||||||||||||  ||||||    
T  31286121 cggattagacaagtgtaccaaatcatttaccaagtaataaagtgtaactagaatatcgtatccacagggattgt-gtttcgtccaaacaatttccgttac 31286023  T
Q  599 ttattt 604  Q
    ||||||    
T  31286022 ttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 10744897 - 10745001
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||| || | ||| ||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaatt 10744996  T
Q  601 atttt 605  Q
    |||||    
T  10744997 atttt 10745001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 10917912 - 10918016
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| | ||||| | |||||||| ||||| ||||| ||||     
T  10917912 gattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattacc 10918011  T
Q  600 tattt 604  Q
    |||||    
T  10918012 tattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 635 - 726
Target Start/End: Complemental strand, 8883085 - 8882994
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    |||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||||||| ||||| || || |||||||||||||||||||||    
T  8883085 gttgcaatttttatctgtttgcaacatagcgagtttacctatttttagttgcagaaaattaagctgcagttaggattcttcgaatcccctct 8882994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 12411143 - 12411250
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||| ||||||||||||||||||  ||| |||||||||||||| | |||||||||||||||||| ||||||| ||||||||| |||||||||   ||||    
T  12411143 cggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggtta 12411242  T
Q  598 cttatttt 605  Q
    ||||||||    
T  12411243 cttatttt 12411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 18736775 - 18736672
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||| | | |  || |||||||||| |||||| ||||||||||||    
T  18736775 attagacaagtgtaccaaatcgtttaccaagtaataaagtataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttactta 18736676  T
Q  602 tttt 605  Q
    ||||    
T  18736675 tttt 18736672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 6289895 - 6290001
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||| |||||| | |||||||| ||||||  | ||||||||| |||    
T  6289895 cggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtgtagacaattcgcatta 6289994  T
Q  598 cttattt 604  Q
    |||||||    
T  6289995 cttattt 6290001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 498 - 622
Target Start/End: Complemental strand, 19171942 - 19171816
Alignment:
Q  498 gcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtt 596  Q
    ||||||||||||||| ||| |||| ||||| |||||||||||||| |||| |||| ||| ||| || ||||||| ||||||||||||||||||| || ||    
T  19171942 gcggattaggcaagtatactaaattgtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcatt 19171843  T
Q  597 actta-ttttgtaagttgacaatataa 622  Q
    ||||| ||||||| |||||| ||||||    
T  19171842 acttatttttgtaggttgacgatataa 19171816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 639 - 716
Target Start/End: Complemental strand, 27413855 - 27413778
Alignment:
Q  639 caatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcg 716  Q
    |||||||||||||||| ||||||||| | ||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  27413855 caatttttatctgttttcaacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcg 27413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 604
Target Start/End: Complemental strand, 821619 - 821515
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||| ||| || |||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| |||||||||  |||||||||  ||||||    
T  821619 gattaagcatgtctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttact 821520  T
Q  600 tattt 604  Q
    |||||    
T  821519 tattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 529 - 715
Target Start/End: Complemental strand, 19925700 - 19925504
Alignment:
Q  529 caagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg--taagttgacaatataa--- 622  Q
    |||||||||| ||| || ||||||||||||||||| | ||||| || ||||||||||| |||||||||||||||||||   |||||| || ||||||       
T  19925700 caagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgatataaaat 19925601  T
Q  623 -taaaagataaggg----ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttc 715  Q
     |||  | |||  |    |||||||||| || ||||||||||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||    
T  19925600 ttaagggttaaaagagacttgcaatttt-atatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggattcttc 19925504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 490 - 637
Target Start/End: Complemental strand, 7478446 - 7478304
Alignment:
Q  490 aatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaat 589  Q
    |||||||||||||| ||||||||||||||||  ||||| ||| ||||||||||      || ||||||||||| |  |||| |||||| |||||||||||    
T  7478446 aatgatgtgcggatcaggcaagtgtaccaaactgtttaccaaataataaagtgat----gactatcgtatccacattgattgtcgtttggtccaaacaat 7478351  T
Q  590 tcgcgttacttattttgtaagttgacaatataataaaagataagggtt 637  Q
    || ||||||||||||| | ||||||  ||||||||||| |||||||||    
T  7478350 tcacgttacttatttt-ttagttgatgatataataaaatataagggtt 7478304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 28728940 - 28729038
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||  |||||  ||||||||||||||||||| |||||||||||||||||||| |  |||| |||||||  ||||||||||||||||||||    
T  28728940 ttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 8319034 - 8319138
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||| |||||| ||||||| |||||||| ||||| |||||||| ||| ||||||| | ||||||||||||||| ||||||||||  ||||||    
T  8319034 gattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttact 8319132  T
Q  600 tatttt 605  Q
    ||||||    
T  8319133 tatttt 8319138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 18458536 - 18458467
Alignment:
Q  494 atgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatcca 562  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  18458536 atgtgtggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 18458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 635 - 724
Target Start/End: Complemental strand, 19909935 - 19909846
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||||||||| |||| || | |||   ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  19909935 gttgcaatttttatctctttgtaaaaaagcgcatttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaatcccct 19909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 8143609 - 8143711
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||| |||||||||||||||||||  ||| ||||||||||||||||||||| |||||||    |||| ||||||| ||||||||| |||| ||||||    
T  8143609 gattaggtaagtgtaccaaatcgtttactaagcaataaagtgtaagtagagtattgtatcca-cgtgattctcgtttcatccaaacaactcgctttactt 8143707  T
Q  601 attt 604  Q
    ||||    
T  8143708 attt 8143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 637 - 728
Target Start/End: Complemental strand, 20023512 - 20023422
Alignment:
Q  637 tgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctat 728  Q
    |||||||||||||||||||||||||||| | |||||  |||||  |||||||||||||||| ||| || ||||||||| |||||||||||||    
T  20023512 tgcaatttttatctgtttgcaacagagcgaatttaccagttttg-gttgcagaaaagtaagtagcagttaggattctttgaatcccctctat 20023422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 12759383 - 12759485
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||| ||| |||||||   |||| ||| ||| |||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttcaaacaaaaaatccgctttactta 12759482  T
Q  602 ttt 604  Q
    |||    
T  12759483 ttt 12759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 527 - 713
Target Start/End: Complemental strand, 19576288 - 19576105
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagttgacaatataat 623  Q
    |||||||||||||||  || || ||||||||||||||| | ||||| || |||||||| ||||||||  |||||||| ||||||||||| |  |    ||    
T  19576288 atcaagtaataaagttagtgaggagagtatcgtatccagatggattgtcctttcgtccgaacaattctagttacttacttttgtaagttta--acggtat 19576191  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattct 713  Q
    ||||| ||   |||||||||||||||||||||||||| ||  | ||||| | ||||| |||||||||||| |||||||||| ||||||||    
T  19576190 aaaag-ta---gttgcaatttttatctgtttgcaacaaagtgaatttacctatttttggttgcagaaaagcaagcagcggttaggattct 19576105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 500 - 578
Target Start/End: Complemental strand, 13908331 - 13908253
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttc 578  Q
    |||||||| |||||||||||||| |||  |||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  13908331 ggattaggaaagtgtaccaaatcttttc-caagtaataaagtgataagtagagtatcatatccatagggattatcgtttc 13908253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 562
Target Start/End: Complemental strand, 21074636 - 21074581
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  21074636 gcaactgtaccaaatcatctatcaagtaataaagtgtaagtagagtatcgtatcca 21074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 7147980 - 7148085
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||| |||||||||||||||| |||||| ||||   ||||||||||||||| |||| | ||||| |||||||  |  ||| |||| ||||||    
T  7147980 cggattaggcaaatgtaccaaatcgtttaccaagtactaaaaaataagtagagtatcgtctccacatggattgtcgtttcaacagaacgattcacgttac 7148079  T
Q  599 ttattt 604  Q
    ||||||    
T  7148080 ttattt 7148085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 667 - 735
Target Start/End: Complemental strand, 7495045 - 7494977
Alignment:
Q  667 gtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| ||||||| |||| |||||||||||||| | | |||||| |||||||||||||||||||||||    
T  7495045 gtttacctgtttttggttgtagaaaagtaagcagggattaggattattcgaatcccctctatttatatt 7494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 530 - 598
Target Start/End: Original strand, 8445846 - 8445913
Alignment:
Q  530 aagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||||||||||||||| || |||| | ||||| |||||||||||||| ||||||||||||    
T  8445846 aagtaataaagtgtaagtagagtattgtgtccacatggattgtcgtttcgtccaaa-aattcgcgttac 8445913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 636
Target Start/End: Complemental strand, 7495151 - 7495065
Alignment:
Q  549 gagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatataataaaagataagggt 636  Q
    |||||||| ||||| | ||||  |||||||||||||||||||  ||||||||||||| | ||||||  ||||||||||||||||||||    
T  7495151 gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttatttt-ttagttgatgatataataaaagataagggt 7495065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 605
Target Start/End: Complemental strand, 8889231 - 8889152
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||||||||||||||| |||||||||||| ||||||| | ||||| || |||||| | |||||||| |||||||||||||    
T  8889231 atcaagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttt 8889152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 732
Target Start/End: Complemental strand, 19171799 - 19171732
Alignment:
Q  665 aagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||  |||||||||||||||||||||| |||| ||| ||||||||||||||| || ||||||||    
T  19171799 aagtttatctgttttttgttgcagaaaagtatgcagtggttaggattcttcgaatcacccctatttat 19171732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 604
Target Start/End: Complemental strand, 8557204 - 8557130
Alignment:
Q  531 agtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||| |||||||||||||||||||| | ||||| ||||||| |  |||||||| |||||||||||||    
T  8557204 agtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 502 - 562
Target Start/End: Complemental strand, 11518065 - 11518004
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatcca 562  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  11518065 attaagcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatcca 11518004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 576
Target Start/End: Complemental strand, 21019698 - 21019625
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    ||||||||  |||||||||| | || ||||||||||||| ||||||||||||| |||||| ||||||| |||||    
T  21019698 ttaggcaacagtaccaaatcatctaccaagtaataaagtataagtagagtatcttatccacaaggattgtcgtt 21019625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 507 - 564
Target Start/End: Complemental strand, 23056269 - 23056212
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccata 564  Q
    ||||||||| |||| |||||| |||||||| |||||||||| ||||||||||||||||    
T  23056269 gcaagtgtatcaaaacgtttaccaagtaatgaagtgtaagttgagtatcgtatccata 23056212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 509 - 562
Target Start/End: Complemental strand, 27543011 - 27542958
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    ||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagtataagtagagtatcgtatcca 27542958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 667 - 735
Target Start/End: Complemental strand, 7478285 - 7478217
Alignment:
Q  667 gtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| ||||||| |||| ||||| |||||||| | | |||||| |||||||||||||||||||||||    
T  7478285 gtttacctgtttttagttgtagaaatgtaagcagggattaggattattcgaatcccctctatttatatt 7478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 597
Target Start/End: Original strand, 10923150 - 10923238
Alignment:
Q  510 agtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||| |||| |||||||||||||| ||| || |||||||||||||  |||||| | ||||| || ||||| |||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttcatctaaacagttcgcgtta 10923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 20339866 - 20339810
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtat 559  Q
    ||||| |||| || ||||||||||| ||||||||||| |||||||||||||||||||    
T  20339866 ttagggaagtatatcaaatcgtttaccaagtaataaaatgtaagtagagtatcgtat 20339810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 562
Target Start/End: Original strand, 25756671 - 25756731
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaag-tgtaagtagagtatcgtatcca 562  Q
    |||||||||||||| ||||| |||||||| ||||||||  |||||||||||||||||||||    
T  25756671 ttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtatcca 25756731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 554
Target Start/End: Original strand, 12752203 - 12752254
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtat 554  Q
    |||| |||||||||||||||||||| |||||||| |||||||||| ||||||    
T  12752203 ttagccaagtgtaccaaatcgtttaccaagtaatgaagtgtaagtggagtat 12752254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 729
Target Start/End: Original strand, 17155931 - 17156021
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    ||||||||||||||||||||||||||||||||||  |   | ||| |||||||||||||||| |||| | |||| | || ||||||||| ||||    
T  17155931 ttgcaatttttatctgtttgcaacagagcaagttacc---tatttggttgcagaaaagtaagtagcgattaggactatttgaatcccctatatt 17156021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 735
Target Start/End: Original strand, 12411289 - 12411384
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||||||  |||||||||| | ||||||||| |||||   ||||||||| ||||||   |||| |||||||||||||||||| || ||||||||    
T  12411289 ttgcaatttttat--gtttgcaacacaacaagtttacctgtttg--gttgcagaacagtaagtgacggttaggattcttcgaatcccccctgtttatatt 12411384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 699
Target Start/End: Original strand, 10745040 - 10745101
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    ||||||||||||||| |||||||||||||||| |||| || |||| |||||||||| |||||||    
T  10745040 ttgcaatttttatctatttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagca 10745101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 534
Target Start/End: Original strand, 22245342 - 22245377
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagta 534  Q
    ||||||||||||||||||||||||||||| ||||||    
T  22245342 cggattaggcaagtgtaccaaatcgtttaccaagta 22245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 640 - 714
Target Start/End: Complemental strand, 18736628 - 18736556
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattctt 714  Q
    ||||||||| |||||||||| || |||||| || ||||||  ||||||||||| ||||||||||| |||||||||    
T  18736628 aatttttatttgtttgcaaccgaacaagtt-acctgttttg-gttgcagaaaaataagcagcggttaggattctt 18736556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 698 - 732
Target Start/End: Complemental strand, 21380477 - 21380443
Alignment:
Q  698 cagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||| |||||||||||||||||||||||||||    
T  21380477 cagcggttaggattcttcgaatcccctctatttat 21380443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 697
Target Start/End: Complemental strand, 21825829 - 21825770
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    |||||||||||||||||||| |||| ||||||||  ||  ||||| ||||||||||||||||    
T  21825829 ttgcaatttttatctgtttgtaacatagcaagttacct--tttttggttgcagaaaagtaag 21825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 2723790 - 2723729
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    ||||||||||||||||||||| |||||| |||| ||  ||| |||||| ||||||||||||||||    
T  2723790 aatttttatctgtttgcaacaaagcaag-ttacctg--tttggttgcaaaaaagtaagcagcggt 2723729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 9e-66; HSPs: 71)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 499 - 721
Target Start/End: Complemental strand, 27737796 - 27737565
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| || ||| ||||||| | ||||||||||||||||||||||||    
T  27737796 cggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgtta 27737697  T
Q  598 ctta-ttttgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    |||| |||||||||||||| ||| ||| ||||||||||        |||||||||||||||||||||||||||||||||||||| || |||||||||||     
T  27737696 cttatttttgtaagttgacgataaaatgaaagataagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctg-tttttgttgcaa 27737598  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcc 721  Q
    |||||||||||||||| ||||||||||||||||    
T  27737597 aaaagtaagcagcggttaggattcttcgaatcc 27737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 492 - 681
Target Start/End: Original strand, 23143707 - 23143905
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  23143707 tgatgtgcggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagata--------agggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
    |  |||||||||||||||||||||| |||||||||||||||        || ||| |||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23143807 catgttacttattttgtaagttgacgatataataaaagataaaggttagagagtttcaatttttatctgtttacaacagatcaagtttgcttttttttt 23143905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 509 - 735
Target Start/End: Complemental strand, 23844562 - 23844327
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttg 606  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||| |||| | | ||||| ||||||||||||||||| |||||||||||| |||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttg 23844463  T
Q  607 taagttgacaatata----ataaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    ||||||||| |||||    |||||||    | ||  |||||||||||||||||||||||| ||| ||||||||| || |||| |||||| ||||||||||    
T  23844462 taagttgacgatataaaagataaaagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctg-ttttggttgcataaaagtaagc 23844364  T
Q  699 agcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| |||||| ||||||||||  || ||||||||    
T  23844363 agcggttaggatttttcgaatccctcctgtttatatt 23844327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 492 - 744
Target Start/End: Complemental strand, 12183445 - 12183185
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| | ||||| || |||||||| |||||||    
T  12183445 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaatt 12183346  T
Q  591 cgcgttacttattttgtaagttgacaatat--aataaaaga---taaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttt 678  Q
    | ||||||||||||  |||| |||| ||||  |||||||||   ||| ||       ||||||| ||||||||||||||||| |||||| |||| || ||    
T  12183345 cacgttacttattt--taaggtgacgatataaaataaaagagtttaaaggttagagattgcaatgtttatctgtttgcaacatagcaag-ttacctg-tt 12183250  T
Q  679 tttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatattcttcgacat 744  Q
    || ||| |||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||    
T  12183249 ttggttacagaaaagtaagcaacggttaggattcttcgaatcccc-ctatttatattgttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 499 - 723
Target Start/End: Complemental strand, 28933767 - 28933535
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| |||||||||| || ||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||     
T  28933767 cggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttg 28933668  T
Q  598 cttattttgtaagttgacaatat--aataaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||||||  ||||  ||||||  |||||||||       |||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  28933667 cttattt--taagttgatgatataaaataaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaag-ttacttgttcttggttgc 28933571  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    | ||||| || ||||||| |||| |||| ||||||||    
T  28933570 a-aaaaggaaacagcggttaggactctttgaatcccc 28933535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 523 - 691
Target Start/End: Complemental strand, 22410410 - 22410234
Alignment:
Q  523 gtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatata 621  Q
    ||||| ||||||||||| || |||||||||||||||||||| | ||||| ||||||| | |||||||||| ||||||||||||| ||||||||| |||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttt-taagttgacgatata 22410312  T
Q  622 ataaaagataaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaa 691  Q
    ||||||||||||||        ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||    
T  22410311 ataaaagataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcagaaa 22410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 9726014 - 9726120
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||| ||||||    
T  9726014 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgtta 9726113  T
Q  598 cttattt 604  Q
    |||||||    
T  9726114 cttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 506 - 724
Target Start/End: Complemental strand, 17827192 - 17826969
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| |||||||  ||||||||||||  ||| |||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||    
T  17827192 ggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattt 17827093  T
Q  605 tgtaagttgacaatataataaaagataagg---------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    | |   ||||||||   |||||||||||||         |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  17827092 t-ttttttgacaat---ataaaagataagggttaaaagagttgcaatttttatatgtttgcaacatagc-agtttacttgtttttggttgcagaaaagta 17826998  T
Q  696 agcagcggtcaggattcttcgaatcccct 724  Q
    |||| |||| || |||||| |||| ||||    
T  17826997 agcaacggttagaattctttgaattccct 17826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 492 - 605
Target Start/End: Complemental strand, 21672549 - 21672435
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||    
T  21672549 tgatgtgcggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21672450  T
Q  591 cgcgttacttatttt 605  Q
    || ||||||| ||||    
T  21672449 cgtgttacttttttt 21672435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 607
Target Start/End: Original strand, 15466362 - 15466470
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||| || ||||||| |||||||||||||||     
T  15466362 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgtacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttag 15466461  T
Q  599 ttattttgt 607  Q
    |||||||||    
T  15466462 ttattttgt 15466470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 492 - 720
Target Start/End: Original strand, 5624625 - 5624862
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtat-ccataaggattatcgtttcgtccaaacaat 589  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||| | |||  |||| |||||| || ||||||||    
T  5624625 tgatgtgcgtattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaat 5624724  T
Q  590 tcgcgttactta-ttttgtaag-ttgacaatataata--aaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
    | |||||||||| ||||||||| ||||| ||| || |   |||    | || |||||||||||||||||||||| || ||||| |||||||  | ||||     
T  5624725 ttgcgttacttatttttgtaagtttgacgatagaaaagttaagggttagaaaggttgcaatttttatctgtttgtaatagagc-agtttaccggcttttg 5624823  T
Q  682 gttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5624824 gttgcagaaaagtaagcagcggttaggattcttcgaatc 5624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 492 - 735
Target Start/End: Complemental strand, 14079558 - 14079320
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||| |            ||||||||| |||     
T  14079558 tgatgtgcgaattaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta-ccaaa------------tcgtccaaaaaatc 14079472  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagataaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttg 682  Q
    ||||||||||||||| ||||||||| ||||  ||||| |||||||        ||||||||||||||||||||||||| || |||||| | | ||||| |    
T  14079471 cgcgttacttatttt-taagttgacgatatgctaaaatataagggctagagagttgcaatttttatctgtttgcaacaaaggaagttttcctatttttgg 14079373  T
Q  683 ttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    || ||||||||||||||||||| || ||||||||||| ||| |||||||||||    
T  14079372 ttacagaaaagtaagcagcggttagaattcttcgaattccccctatttatatt 14079320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 492 - 605
Target Start/End: Complemental strand, 21679965 - 21679851
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||    
T  21679965 tgatgtgcggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21679866  T
Q  591 cgcgttacttatttt 605  Q
    || ||||||| ||||    
T  21679865 cgtgttacttttttt 21679851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 508 - 701
Target Start/End: Original strand, 9516786 - 9516988
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||| ||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattttt 9516885  T
Q  606 gtaagttgacaatata----ataaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    |||||||||| |||||    |||||||    | || ||||| || ||||||||||| |||||| ||||||||||| |  ||||  |||||||||| ||||    
T  9516886 gtaagttgacgatataaaagataaaagggttagaaaggttgtaagttttatctgttagcaacatagcaagtttacct-attttgattgcagaaaattaag 9516984  T
Q  698 cagc 701  Q
    ||||    
T  9516985 cagc 9516988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 512 - 732
Target Start/End: Complemental strand, 23645861 - 23645633
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaag 610  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||  ||||| |||||||  ||     
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaac 23645762  T
Q  611 ttgacaatataataaaaga--taaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagc 701  Q
       | |||| |||||||||  | ||||       ||||||||||||| |||||||||||||||||| |||| || |||| |||||| ||||||||||||     
T  23645761 aataaaataaaataaaagagttgagggttagagattgcaatttttatttgtttgcaacagagcaag-ttacatg-ttttggttgcataaaagtaagcagt 23645664  T
Q  702 ggtcaggattcttcgaatcccctctatttat 732  Q
    ||| ||| ||||| |||||| ||||||||||    
T  23645663 ggttaggcttctttgaatccgctctatttat 23645633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 495 - 598
Target Start/End: Original strand, 17729140 - 17729244
Alignment:
Q  495 tgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgc 593  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||| ||||||    
T  17729140 tgtgcggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgc 17729239  T
Q  594 gttac 598  Q
    |||||    
T  17729240 gttac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 508 - 735
Target Start/End: Original strand, 25781796 - 25782014
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt- 605  Q
    ||||||||||||||||||||   ||||||||| || ||| |||| ||||||||  |     ||| |||||||||||||||||||| |||||||||||||     
T  25781796 caagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtatgga-----attgtcgtttcgtccaaacaattcacgttacttattttt 25781890  T
Q  606 gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtc 705  Q
    |||||||||   |||||   ||| ||  ||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||| |||  ||     
T  25781891 gtaagttgatggtataa---aagtta--ggttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcagaaaagtaaacagtagtt 25781984  T
Q  706 aggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||||||||| | ||||||    
T  25781985 aggattcttcgaatcccctctgtatatatt 25782014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 489 - 731
Target Start/End: Original strand, 11176932 - 11177183
Alignment:
Q  489 taatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaaca 587  Q
    ||||||||  ||||||||||||||||||| ||||||||| | |||| ||||||| |||||||||||||||||||| | || || ||||||| || ||| |    
T  11176932 taatgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaata 11177031  T
Q  588 attcgcgttacttattttgtaagttgacaatat--aataaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgt 676  Q
    ||||| |||||||||||  ||| ||||| ||||  ||||||  |||||||||       |||||||||||||  |||||||||| |||||| |||| |||    
T  11177032 attcgtgttacttattt--taaattgacgatataaaataaaagagataagggttagaaattgcaatttttataagtttgcaacatagcaag-ttacctgt 11177128  T
Q  677 tttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctattta 731  Q
    |||||||| || ||||| || ||||||| |||| ||||  |||||||||||||||    
T  11177129 tttttgttacataaaaggaaacagcggttaggactctttaaatcccctctattta 11177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 499 - 601
Target Start/End: Original strand, 21907424 - 21907527
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||| || ||||||||    
T  21907424 cggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgtta 21907523  T
Q  598 ctta 601  Q
    ||||    
T  21907524 ctta 21907527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 509 - 724
Target Start/End: Complemental strand, 27124589 - 27124368
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgt 607  Q
    ||||||||||||||||||| |||||||||||||| ||| || | ||||||||| | | ||||| ||||||||  |||||||||| |||||||||||||      
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttg 27124490  T
Q  608 aagttgacaatataataaaagataagggttg---------caatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    || ||||| ||||||   || |||||||||          |||||||||| ||||||||||||||||||||||| ||| ||  |||||||||||||||||    
T  27124489 aacttgacgatataa---aacataagggttaaaagacttccaatttttatatgtttgcaacagagcaagtttacctgtcttg-gttgcagaaaagtaagc 27124394  T
Q  699 agcggtcaggattcttcgaatcccct 724  Q
    |||||| | ||||||| |||||||||    
T  27124393 agcggttaagattctttgaatcccct 27124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 522 - 723
Target Start/End: Complemental strand, 23232067 - 23231859
Alignment:
Q  522 cgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaag-ttgacaat 618  Q
    |||||| |||||||||||||| ||||||| ||||| |||||||||| ||| ||| |||||||||||||||||||||||||| ||||||||| ||||| ||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttttgtaagtttgacgat 23231968  T
Q  619 ataa---taaaag---ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattc 712  Q
    ||||   | || |   | |||  |||||| |||||||||||||||||||||||| |||||||| |||| |||  ||||||||||||| || | |||||||    
T  23231967 ataaaagttaacggttagaagtcttgcaa-ttttatctgtttgcaacagagcaaatttacttg-ttttggttatagaaaagtaagcaacgtttaggattc 23231870  T
Q  713 ttcgaatcccc 723  Q
    |||||||||||    
T  23231869 ttcgaatcccc 23231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 499 - 603
Target Start/End: Complemental strand, 25927410 - 25927305
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||||| | ||||| | |||||||||||||||||| |||||    
T  25927410 cggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgtta 25927311  T
Q  598 cttatt 603  Q
    ||||||    
T  25927310 cttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 636 - 735
Target Start/End: Complemental strand, 20145083 - 20144984
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||||||| |||||||||| |||||||||||||||||||||  |||||||    
T  20145083 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaatcccctctggttatatt 20144984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 636 - 735
Target Start/End: Original strand, 22187756 - 22187855
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||||||| |||||||||| |||||||||||||||||||||  |||||||    
T  22187756 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaatcccctctggttatatt 22187855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 494 - 605
Target Start/End: Original strand, 4339722 - 4339834
Alignment:
Q  494 atgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcg 592  Q
    ||||| ||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||| || |||| |||||| |||||| |||||||    
T  4339722 atgtgtggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcg 4339821  T
Q  593 cgttacttatttt 605  Q
    | |||||||||||    
T  4339822 cattacttatttt 4339834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 527 - 728
Target Start/End: Complemental strand, 24657534 - 24657338
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    ||||||||||||| || ||||| |||||||||||||| | ||||| |  |||||||| ||||||||  |||||||||||| ||||||| |||  |||||     
T  24657534 atcaagtaataaaatgataagtcgagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataa- 24657436  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
       || ||||  ||| ||||||||||||||||||||||||| | ||||| ||||||  ||||||||||||||||||||||| || |||||||||||||||    
T  24657435 ---ag-taag--ttgaaatttttatctgtttgcaacagagcgaatttacctgttttg-gttgcagaaaagtaagcagcggttagaattcttcgaatcccc 24657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 607
Target Start/End: Complemental strand, 8039238 - 8039137
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||       |||| ||||||| ||||||||||||| |||||    
T  8039238 cggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgtaagtggagtatcgtat-------gattgtcgtttcatccaaacaattcgtgttac 8039146  T
Q  599 ttattttgt 607  Q
    |||||||||    
T  8039145 ttattttgt 8039137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 636 - 726
Target Start/End: Complemental strand, 20005879 - 20005789
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||| ||| |||||||| | |||||||||||||||||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcgaatcccctct 20005789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 606
Target Start/End: Complemental strand, 21688902 - 21688794
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| ||||||||| |||||||||  ||||||| ||||| |||||||||||| ||||||||| ||||| ||||| | |||||| |||||||||||    
T  21688902 cggattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgtta 21688803  T
Q  598 cttattttg 606  Q
    |||||||||    
T  21688802 cttattttg 21688794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 634 - 726
Target Start/End: Original strand, 11136032 - 11136125
Alignment:
Q  634 ggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc-agaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    ||||||||||||||||||||||||||||||| |  |||| ||||||| ||||| | ||||||||| |||||| |||||||||||||||||||||    
T  11136032 ggttgcaatttttatctgtttgcaacagagcgaacttacctgtttttggttgcaaaaaaagtaagaagcggttaggattcttcgaatcccctct 11136125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 642 - 735
Target Start/End: Original strand, 14637012 - 14637104
Alignment:
Q  642 tttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||  || ||||||||||||||||| ||||||| |||||||||||||||||||||   |||||||||||||||||| |||||||||||    
T  14637012 tttttatcttattacaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaatcccc-ctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 512 - 604
Target Start/End: Complemental strand, 17299925 - 17299832
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||| |||  ||||| |||||| |||||||||||| |||||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 8241269 - 8241374
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||| ||||  |  ||||| ||||||||||||| | |||    
T  8241269 cggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg--ttgcgttttgtccaaacaattcacatta 8241366  T
Q  598 cttatttt 605  Q
    ||||||||    
T  8241367 cttatttt 8241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 492 - 629
Target Start/End: Complemental strand, 18075502 - 18075365
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||| |||||||| |||| ||||| |||||||||||||| |||| |||||||||||||||   ||||| |||||| |||||||||||     
T  18075502 tgatgtgcggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatc 18075403  T
Q  591 cgcg-ttacttattttgtaagttgacaatataataaaaga 629  Q
     | | ||||||||||  | ||||||||||| |||||||||    
T  18075402 tgagtttacttattt--ttagttgacaataaaataaaaga 18075365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 609
Target Start/End: Complemental strand, 17883891 - 17883780
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||| ||| |||||||||||||||| |||||||||| |||| ||||||| |||| ||| | | ||||| || |||||||||||||||||| |||||    
T  17883891 cggattagccaaatgtaccaaatcgtttaccaagtaataacgtgtgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttac 17883792  T
Q  599 tta-ttttgtaa 609  Q
    ||| ||||||||    
T  17883791 ttacttttgtaa 17883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 22567832 - 22567939
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||  ||||| ||||| ||||||| | ||||| | ||||||||||||||| || |||||    
T  22567832 cggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaactcacgtta 22567931  T
Q  598 cttatttt 605  Q
    ||||||||    
T  22567932 cttatttt 22567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 506 - 726
Target Start/End: Complemental strand, 21841788 - 21841571
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| |  || |||||||||||||| | |||||||||| | | ||||| | ||||| || |||||||| |||| |||  |||||||||||    
T  21841788 ggcaagtgtaccaattgtttcatcaagtaataaagagataagtagagttttgaatccacatggattgtcctttcgtccgaacatttcttgttacttattt 21841689  T
Q  605 t-gtaagtt-gacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcg 702  Q
    | ||||||| |||  |||||   ||| ||  |||||||||||||||||| |||||||| |||||||||||||| |||| ||||||  |||  ||| || |    
T  21841688 ttgtaagtttgacggtataa---aagtta--ggttgcaatttttatctgattgcaacaaagcaagtttacttg-ttttggttgcaagaaatgaagtagtg 21841595  T
Q  703 gtcaggattcttcgaatcccctct 726  Q
    || |||||||||||||||||||||    
T  21841594 gttaggattcttcgaatcccctct 21841571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 603
Target Start/End: Complemental strand, 7543067 - 7542962
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||| |||| ||||| ||||| |||||||||||||| |||||| ||||||||||| ||  ||| | | ||||| ||||||||||||||||||    
T  7543067 cggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaattcgcgtta 7542968  T
Q  598 cttatt 603  Q
    ||||||    
T  7542967 cttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 634 - 735
Target Start/End: Original strand, 24475192 - 24475292
Alignment:
Q  634 ggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttata 733  Q
    ||||||||| ||||||||||||||||| | ||||||||| ||||||  |||||||||||||||| || ||| ||||||||||||||| || || ||||||    
T  24475192 ggttgcaatctttatctgtttgcaacaaaacaagtttacctgttttg-gttgcagaaaagtaagtagtggttaggattcttcgaatctcccctgtttata 24475290  T
Q  734 tt 735  Q
    ||    
T  24475291 tt 24475292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 508 - 585
Target Start/End: Complemental strand, 20005977 - 20005899
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaa 585  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||| | | ||||| ||||||||||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 17382214 - 17382274
Alignment:
Q  643 ttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatg-ttttggttgcagaaaagtaagcagcggt 17382274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 512 - 604
Target Start/End: Complemental strand, 22566256 - 22566163
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||  |||| |||||||||||||| ||||||||||||| |||||| ||| ||| ||| |||||| || |||||||||||||||||||    
T  22566256 tgtaccaaattatttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 503 - 595
Target Start/End: Complemental strand, 28589533 - 28589440
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgt 595  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||| ||| | ||||| |||||||  ||||| |||||||||    
T  28589533 ttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttcaaccaaaaaattcgcgt 28589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 588
Target Start/End: Original strand, 19244579 - 19244667
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaa 588  Q
    |||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||| ||| |||  |||| |||||||||||||||||    
T  19244579 gattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 570
Target Start/End: Original strand, 34478532 - 34478588
Alignment:
Q  514 taccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggatt 570  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  34478532 taccaaatcgtttaccaaataataaagtgtaagtagagtatcgtatccacaaggatt 34478588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 596
Target Start/End: Original strand, 2586716 - 2586810
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtt 596  Q
    |||||||||||||||||||| ||||| |||||||| ||||| |||||| ||||| | ||||| || |||| |||||||||||||| ||||||||||    
T  2586716 attaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat-gcatccaaaatgattgtcgtttcgtccaaaaaattcgcgtt 2586810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 607
Target Start/End: Complemental strand, 9899062 - 9898956
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaa--gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||| |||||||||||||| ||||| ||||||||||||| |||  ||||||||| |||||||   ||||| | ||||||| ||||| |||| ||||||||    
T  9899062 ttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaaccattcacgttactt 9898963  T
Q  601 attttgt 607  Q
    |||||||    
T  9898962 attttgt 9898956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 728
Target Start/End: Complemental strand, 23009473 - 23009277
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    |||||||| ||||||| ||||||||| |||||||||| | ||||| || |||| |||||| |||||  |||||||||||| ||||||| ||| ||||||     
T  23009473 atcaagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataa- 23009376  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
      ||| ||||  ||||| ||||||| ||||||||||||||||| ||||| || |||| |||| |||  ||||| ||||| | |||| |||||||||||||    
T  23009375 --aag-taag--ttgcagtttttatttgtttgcaacagagcaaatttacctg-ttttggttgaagacgagtaaacagcgattaggactcttcgaatcccc 23009282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 728
Target Start/End: Original strand, 23778891 - 23779087
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    |||||||| ||||||| ||||||||| |||||||||| | ||||| || |||| |||||| |||||  |||||||||||| ||||||| ||| ||||||     
T  23778891 atcaagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataa- 23778988  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
      ||| ||||  ||||| ||||||| ||||||||||||||||| ||||| || |||| |||| |||  ||||| ||||| | |||| |||||||||||||    
T  23778989 --aag-taag--ttgcagtttttatttgtttgcaacagagcaaatttacctg-ttttggttgaagacgagtaaacagcgattaggactcttcgaatcccc 23779082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 637 - 713
Target Start/End: Complemental strand, 22813680 - 22813605
Alignment:
Q  637 tgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattct 713  Q
    |||||||||||| ||||||||||| ||||||||||| || |||| |||||||||||||||| |||||| | ||||||    
T  22813680 tgcaatttttatttgtttgcaacaaagcaagtttacctg-ttttggttgcagaaaagtaagtagcggttatgattct 22813605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 20722278 - 20722212
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggatt 570  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||  |||||| |||||||    
T  20722278 ttaggcaaatgtaccaaatcgtttaccaagtaataaagt-taagtagagtataatatccacaaggatt 20722212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 21932155 - 21932100
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgt 557  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 719
Target Start/End: Complemental strand, 22413128 - 22412940
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    |||||||||||||||  |||||||||||||||||| | | ||||| |  |||||||| ||||||||  |||||||||||| ||||||| |||  |||||     
T  22413128 atcaagtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataa- 22413030  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaat 719  Q
     ||  ||    ||||||| ||||||||||||| |||||||| | ||||| || |||| ||| ||| |||||||| |||||| ||||||||||||||    
T  22413029 -aagtat----gttgcaacttttatctgtttgtaacagagcgaatttacctg-ttttggttacaggaaagtaagtagcggttaggattcttcgaat 22412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 495 - 559
Target Start/End: Complemental strand, 20145171 - 20145106
Alignment:
Q  495 tgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtat 559  Q
    |||| |||||||||||||||||||||| ||| | |||||||||||||| |||||||||||| ||||    
T  20145171 tgtgaggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 495 - 559
Target Start/End: Original strand, 22187668 - 22187733
Alignment:
Q  495 tgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtat 559  Q
    |||| |||||||||||||||||||||| ||| | |||||||||||||| |||||||||||| ||||    
T  22187668 tgtgaggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 729
Target Start/End: Complemental strand, 22566122 - 22566030
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    |||||||||||||||||||||||||   |||||| || | |||||  ||| |||||||||||||||||| |||||| || ||||| ||||||||    
T  22566122 ttgcaatttttatctgtttgcaacactacaagtt-acctatttttgattgtagaaaagtaagcagcggttaggattttttgaatctcctctatt 22566030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 601
Target Start/End: Original strand, 24251511 - 24251611
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||| ||||||||| ||| ||||||| |||||||||||||  |||| |||| |||| ||||| | || || |||| | ||||||||||||||||||||||    
T  24251511 attaagcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactt 24251610  T
Q  601 a 601  Q
    |    
T  24251611 a 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 720
Target Start/End: Original strand, 1635110 - 1635183
Alignment:
Q  645 ttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    |||||||||||||||| |||||||| || ||||||  |||| |||||||||| ||||||| |||||||||||||||    
T  1635110 ttatctgtttgcaacaaagcaagtt-acatgttttg-gttgtagaaaagtaaacagcggttaggattcttcgaatc 1635183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 640 - 723
Target Start/End: Original strand, 9838499 - 9838580
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||||||| |||||||||| ||  |||||  ||||||||||||||||||  ||| |||||||||| |||||||    
T  9838499 aatttttatctgtttgcaaaagagcaagtt-acccgttttg-gttgcagaaaagtaagcaatggttaggattcttcaaatcccc 9838580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 26215488 - 26215414
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttc 578  Q
    ||||||||  |||||||||| |||  ||| ||||||||||||||||||||||||||||||||  |||| |||||||    
T  26215488 ttaggcaatagtaccaaatcatttc-caaataataaagtgtaagtagagtatcgtatccatatagattgtcgtttc 26215414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 578
Target Start/End: Original strand, 9385956 - 9386026
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttc 578  Q
    |||||||||||||| | ||| |||||||||||||| |||||||||  |||||||| | ||||| |||||||    
T  9385956 caagtgtaccaaattggttaccaagtaataaagtgcaagtagagtcgcgtatccacatggattgtcgtttc 9386026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 605
Target Start/End: Complemental strand, 24252287 - 24252229
Alignment:
Q  547 tagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||||||||||||||| | ||||| |||||| |||||||||||||  ||||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttt 24252229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 604
Target Start/End: Complemental strand, 28586133 - 28586031
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||| ||||| |||||||||||||| | ||||||||| || ||||||||||||| |||| | | ||||| |||||||  | ||||||| | |||||||||    
T  28586133 ttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaatccacgttactta 28586034  T
Q  602 ttt 604  Q
    |||    
T  28586033 ttt 28586031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 636 - 722
Target Start/End: Original strand, 15466509 - 15466592
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
    |||||| |||||||||||||||||||||||||||  |   | ||| ||||||||||||||| ||||||| || | ||||| ||||||    
T  15466509 ttgcaaattttatctgtttgcaacagagcaagttacc---tatttggttgcagaaaagtaaacagcggttagaactcttcaaatccc 15466592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 640 - 724
Target Start/End: Original strand, 21907577 - 21907660
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||||||||||||||||||||| |||  | ||||| |||||| ||||| || ||||||| | || |||| |||||||||    
T  21907577 aatttttatctgtttgcaacagagcaag-ttagctatttttggttgcaaaaaaggaaacagcggttacgactctttgaatcccct 21907660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 9838380 - 9838455
Alignment:
Q  531 agtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||||||||||| |||||||||||| ||||||| | ||||| || ||| ||  |||||| ||||||||||||||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt 9838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 701
Target Start/End: Original strand, 8241414 - 8241476
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagc 701  Q
    ||||||||||||||||||||||||| |||||| |||| ||  ||| |||| |||||||||||||||    
T  8241414 ttgcaatttttatctgtttgcaacatagcaag-ttacctg--tttggttgtagaaaagtaagcagc 8241476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 640 - 670
Target Start/End: Complemental strand, 24252186 - 24252156
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagttt 670  Q
    |||||||||||||||||||||||||||||||    
T  24252186 aatttttatctgtttgcaacagagcaagttt 24252156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 732
Target Start/End: Original strand, 4339877 - 4339967
Alignment:
Q  639 caatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||| ||||| ||||||||||  |||||||| || ||||||  ||||||||||||||| ||||||||||| |||||| ||||| | ||||||||    
T  4339877 caatatttatttgtttgcaactaagcaagtt-acctgttttg-gttgcagaaaagtaaccagcggtcagggttcttc-aatcctccctatttat 4339967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 533 - 562
Target Start/End: Original strand, 9386070 - 9386099
Alignment:
Q  533 taataaagtgtaagtagagtatcgtatcca 562  Q
    ||||||||||||||||||||||||||||||    
T  9386070 taataaagtgtaagtagagtatcgtatcca 9386099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 669
Target Start/End: Complemental strand, 25927265 - 25927232
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtt 669  Q
    ||||||||||||||||||||||| ||||||||||    
T  25927265 ttgcaatttttatctgtttgcaatagagcaagtt 25927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 508 - 735
Target Start/End: Complemental strand, 19492798 - 19492574
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt- 605  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||     
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattttt 19492699  T
Q  606 gtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtc 705  Q
    ||| |||||||||||||   ||| ||  ||||||||| ||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||     
T  19492698 gtaggttgacaatataa---aagtta--ggttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaagcggcggtt 19492604  T
Q  706 aggattcttcgaatcccctctatttatatt 735  Q
    |||||||||||||||||| || ||||||||    
T  19492603 aggattcttcgaatcccccctgtttatatt 19492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 507 - 723
Target Start/End: Original strand, 13908854 - 13909079
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttt 604  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| |||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttt 13908953  T
Q  605 tgtaa-gttgacaatataata--aaagat----aagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    |||||  ||||| |||||| |  |||| |    |||  ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  13908954 tgtaattttgacgatataaaagtaaaggttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagtaag 13909053  T
Q  698 cagcggtcaggattcttcgaatcccc 723  Q
    ||||||| ||||||||| ||||||||    
T  13909054 cagcggttaggattctttgaatcccc 13909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 492 - 726
Target Start/End: Complemental strand, 19562292 - 19562046
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||||||| |||||| |||||||| |||| ||| ||| ||||||| |||||||||||    
T  19562292 tgatgtgcggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatt 19562193  T
Q  591 cgcgttacttattttgtaag-ttgacaatataataaaagat--aaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgtttt 679  Q
     |  ||||||||||| |||| |||||| |||||||||||||  |||||        ||||||||||||||| ||||||||||||||||||||| ||||||    
T  19562192 tgtattacttattttttaagtttgacattataataaaagataaaagggttatttaattgcaatttttatctctttgcaacagagcaagtttacctgtttt 19562093  T
Q  680 ttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    | ||||||||||||||| ||||||| || ||||||||||||||||||    
T  19562092 tggttgcagaaaagtaatcagcggttagaattcttcgaatcccctct 19562046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 492 - 702
Target Start/End: Complemental strand, 13128988 - 13128768
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||||| ||||| ||||||||||||||||| |    
T  13128988 tgatgttcgaattaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaact 13128889  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttt-t 681  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||        |||||||||||||| |||||| ||||||| |||||| | |||||||      
T  13128888 cgcgttacttatttttttagttgaccatataataaaagataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcg 13128789  T
Q  682 gttgcagaaaagtaagcagcg 702  Q
    |||||||||||||||||||||    
T  13128788 gttgcagaaaagtaagcagcg 13128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 501 - 721
Target Start/End: Complemental strand, 13692774 - 13692557
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| | ||||| |||||||| |||||||||||| ||||||    
T  13692774 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttact 13692675  T
Q  600 ta-ttttgtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    || ||||||| |||||   |   |||||| |||  |||||||||||||||  ||||| || ||||||||||||| ||||||| |||||||||||||||||    
T  13692674 tatttttgtaggttgaaggt---ataaaatata--ggttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaaaagtaagc 13692580  T
Q  699 agcggtcaggattcttcgaatcc 721  Q
    ||  || ||||||||||||||||    
T  13692579 agtagttaggattcttcgaatcc 13692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 506 - 710
Target Start/End: Original strand, 17216816 - 17217031
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat-t 603  Q
    ||||| |||||||||||||||| |||| ||||||||| ||||||||||||| |||||| | ||||| |||||||||||||||||||| |||||||||| |    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatat 17216915  T
Q  604 ttgtaagttgacaatataataaaagat--aagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaag 693  Q
    |||||||||||  |||||||| |||||  ||||        |||||||||||||||||||||||||||||||||||||| || |||| |||| |||||||    
T  17216916 ttgtaagttgatgatataatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatg-ttttggttgtagaaaag 17217014  T
Q  694 taagcagcggtcaggat 710  Q
    |||||| |||| |||||    
T  17217015 taagcaacggttaggat 17217031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 509 - 735
Target Start/End: Original strand, 7582299 - 7582534
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg- 606  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||| |||||| | ||||| | ||||||||||||||||  || ||||||||||||     
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttgg 7582398  T
Q  607 taagtt-gacaatataa----taaaaga--taagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    |||||| ||| ||||||    ||||||   || |  |||||||||| |||||||||||| ||| ||||||||| ||||||| ||||||||||| ||||||    
T  7582399 taagtttgacgatataaaagataaaaggcttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagca 7582498  T
Q  700 gcggtcaggattcttcgaatcccctctatttatatt 735  Q
    | ||| ||||||||| ||||||||||| ||||||||    
T  7582499 gtggttaggattctttgaatcccctctgtttatatt 7582534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 499 - 723
Target Start/End: Complemental strand, 25121332 - 25121101
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  25121332 cggattaggaaagtgttccaaatcgtttaccaagtaataaagtgtaagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttac 25121233  T
Q  599 ttattttgtaagttgacaatat-aataaaa---------gataa-gggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||| ||   || | || || |||||||         |||||  | ||||||||| |||||||||||||||||||||| ||||  | ||||  |||||    
T  25121232 ttatttggt--tttaaaaaaataaataaaagagttgagtgataatagattgcaatttctatctgtttgcaacagagcaag-ttacccg-ttttgattgca 25121137  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25121136 gaaaagtaagcagcggttaggattcttcgaatcccc 25121101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 493 - 735
Target Start/End: Complemental strand, 17337247 - 17336997
Alignment:
Q  493 gatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    |||||| |||||| | |||| ||||||||| || | | |||||||| ||| |||||||||||||||||||| |  |||| || ||||||||||||||||     
T  17337247 gatgtgtggattaagtaagtctaccaaatcatt-accgagtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaattt 17337149  T
Q  592 gcgttacttattttgtaagttgacaatataataaaagat--aagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
    ||||||||||||||   ||||||| |||||||||||||   |||||||        ||||||||||||||||| ||||||||||||||||| |||||||     
T  17337148 gcgttacttattttt--agttgacgatataataaaagagtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtttacctgtttttg 17337051  T
Q  682 gttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| |||||||||||| | | | ||||||||||||||||  ||||||||||    
T  17337050 gttgcataaaagtaagcagagattatgattcttcgaatcccccttatttatatt 17336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 501 - 723
Target Start/End: Original strand, 14648889 - 14649119
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||||| ||||||| || ||| |  ||| ||||||    
T  14648889 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca-caggattgtcgtttcttctaaatagctcgtgttact 14648987  T
Q  600 tattttgtaagttgacaatat--aataaaag--ataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    |||||  ||||||||| ||||  ||||||||  |||||||       || ||||||||||||||||||||||||||||| |||||||||||| |||| ||    
T  14648988 tattt--taagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaag-ttacttgtttttggttgtag 14649084  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||| || || |||| |||| |||| ||||||||    
T  14649085 aaaaggaaacaacggttaggactctttgaatcccc 14649119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 499 - 711
Target Start/End: Original strand, 17671994 - 17672214
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| | ||||| | |||||||| |||||| ||||||||    
T  17671994 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgtta 17672093  T
Q  598 cttattttgtaagttgacaatat--aataaaaga--taaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  |||||| || ||||  |||||||||  ||| ||       ||||||||||||||||||||||||||||||||||  || |  ||| |||||    
T  17672094 cttattt--taagttaacgatataaaataaaagagttaaaggttagagattgcaatttttatctgtttgcaacagagcaagttacctgg--tttggttgc 17672189  T
Q  687 agaaaagtaagcagcggtcaggatt 711  Q
    ||||||||||| ||| || ||||||    
T  17672190 agaaaagtaagaagcagttaggatt 17672214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 19882632 - 19882738
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| | | ||||| ||||||||||||||||||||||||||    
T  19882632 cggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgtta 19882731  T
Q  598 cttattt 604  Q
    |||||||    
T  19882732 cttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 11490524 - 11490631
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | ||||| | ||||| ||||||||||||||||||    
T  11490524 cggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgtta 11490623  T
Q  598 cttatttt 605  Q
    ||||||||    
T  11490624 cttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 508 - 735
Target Start/End: Original strand, 15164768 - 15165003
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||||||||||||||| |||||||| || |  |||| ||||||||||||||| | ||||| || |||||||||||||||| |||||||||| ||||    
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttattttt 15164867  T
Q  606 gtaag-ttgacaatataa----taaaagata-agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    ||||| ||||| ||||||    |||  | || || |||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||      
T  15164868 gtaagtttgacgatataaaagttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagtg 15164966  T
Q  700 gcggtcaggattcttcgaat-cccctctatttatatt 735  Q
    | ||| ||  |||||||||| ||||||| ||||||||    
T  15164967 gaggttagttttcttcgaatccccctctgtttatatt 15165003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 506 - 680
Target Start/End: Complemental strand, 16730499 - 16730317
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||| |||||| |||||| |||  ||| || |||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| ||    
T  16730499 ggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttattt 16730400  T
Q  604 ttgtaag-ttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
    ||||||| ||||||||   ||||||| |||||        |||||||||||||||||||||||||||||||||||||| |||||||    
T  16730399 ttgtaagtttgacaat---ataaaagttaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacctgttttt 16730317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 492 - 735
Target Start/End: Original strand, 40227762 - 40228011
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||||||| |||||  | ||| ||||||||| | ||| | ||||| |||||||||||    
T  40227762 tgatgtgaggattaggcaagtgtaccaaatcgtt-accaagtaataaagtgataagttaa-tattgtatccataggaattgtagtttcatccaaacaatt 40227859  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagat--aaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
    ||||||||||||||| ||  ||||| |||  ||||||||   |||||        || ||||||||||||||||||||| ||| |||||||| | |||||    
T  40227860 cgcgttacttatttt-tagtttgacgataatataaaagagtaaagggctagaggtttacaatttttatctgtttgcaacggagtaagtttacctattttt 40227958  T
Q  681 tgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| ||||| ||||||||||| ||||||||| |||||||| |||||||||||    
T  40227959 tgttgccgaaaaataagcagcggttaggattctt-gaatcccc-ctatttatatt 40228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 492 - 602
Target Start/End: Complemental strand, 13992990 - 13992879
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||| ||| ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||    
T  13992990 tgatgtgcggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 13992891  T
Q  591 cgcgttacttat 602  Q
    || |||||||||    
T  13992890 cgtgttacttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 492 - 669
Target Start/End: Complemental strand, 12578380 - 12578193
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||| ||||||||||||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||| | ||||| |||||| ||||||||||||    
T  12578380 tgatgtgaggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatt 12578281  T
Q  591 cgcgttacttattttgtaagttgacaatat--aataaaaga-taaggg--------ttgcaatttttatctgtttgcaacagagcaagtt 669  Q
     ||||| |||||||  ||||||||| ||||  ||||||||| ||| ||        || |||||||||||||||||||||||||||||||    
T  12578280 tgcgtttcttattt--taagttgacgatataaaataaaagagtaaagggttagagattacaatttttatctgtttgcaacagagcaagtt 12578193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 507 - 724
Target Start/End: Original strand, 17709757 - 17709979
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||| |  ||| |||   ||||||| |||||||||||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttatttt 17709853  T
Q  606 g-taagttgacaatataataaaagataagggtt----------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
      ||| ||||| ||||||   ||||||||||||          | ||||||||| ||||||||||||||||||||||| || |||| |||||| ||||||    
T  17709854 tataatttgacgatataa---aagataagggttaaaaagacttgaaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagt 17709949  T
Q  695 aagcagcggtcaggattcttcgaatcccct 724  Q
    ||| ||| || |||||||||||||||||||    
T  17709950 aagtagctgttaggattcttcgaatcccct 17709979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 508 - 605
Target Start/End: Complemental strand, 26116001 - 26115904
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||| ||| |||||||||||||  |||||||||||    
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtgtaattaaagtatcgtatccataaggattgtcgattcttccaaacaattcgttttacttatttt 26115904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 606
Target Start/End: Original strand, 9052666 - 9052773
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||  || |||| | |||||  ||||||||||| ||||||    
T  9052666 cggattaggcaagtgtaccaaatcatttaccaagtaataaaatgtaagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgttac 9052765  T
Q  599 ttattttg 606  Q
    ||||||||    
T  9052766 ttattttg 9052773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 21323982 - 21323875
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||| |||||||||| ||| |||||| ||| | |||||||||||||||||| |  |||| ||||||||||||||||||||||||||    
T  21323982 cggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgtta 21323883  T
Q  598 cttatttt 605  Q
    ||||||||    
T  21323882 cttatttt 21323875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 527 - 724
Target Start/End: Complemental strand, 17026412 - 17026217
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataa 622  Q
    |||||||| ||||||  |||||||||||||||||| || | ||||| || ||||||   ||||||||  |||||||||||| ||||||| |||| |||||    
T  17026412 atcaagtattaaagttagtaagtagagtatcgtattcacatggattgtcctttcgtgggaacaattctagttacttatttttgtaagtttgacagtataa 17026313  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
       |||  |   |||||| |||||||||||||||||||||| || ||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||    
T  17026312 ---aagtga---gttgcagtttttatctgtttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaatccc 17026219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 507 - 604
Target Start/End: Original strand, 20315000 - 20315098
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| |||| |||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 25097854 - 25098049
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatataata 624  Q
    |||||||||||||||  ||||||||||||||||||||| | ||||| |  ||| |||| || |||||  ||||||||||||   |||||||||||| |      
T  25097854 atcaagtaataaagttagtaagtagagtatcgtatccacatggattgttcttttgtccgaaaaattcatgttacttatttttatagttgacaatatta-- 25097951  T
Q  625 aaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
     ||| ||   ||||||||||||||||||| |||||| ||||| ||||| ||||||| ||||  |||||||| |||||||| |||||||||||||||| ||    
T  25097952 -aagtta---gttgcaatttttatctgttggcaacaaagcaaatttacctgtttttggttgttgaaaagtatgcagcggttaggattcttcgaatccgct 25098047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 502 - 669
Target Start/End: Original strand, 5679200 - 5679377
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||| |||||||||||||||||||| |||||||||||||| | |||||||||||||||| | | | | | | |||||||||||||||||||||||||||    
T  5679200 attagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactt 5679299  T
Q  601 attttgtaagttgacaatat--aataaaaga--taaggg-------ttgcaatttttatctgtttgcaacagagcaagtt 669  Q
    ||||  |||||| || ||||  |||||||||  ||||||       |||||||||||||||||||| |||||||||||||    
T  5679300 attt--taagttaacgatataaaataaaagagttaagggttagacattgcaatttttatctgtttgtaacagagcaagtt 5679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 504 - 693
Target Start/End: Complemental strand, 19929777 - 19929579
Alignment:
Q  504 taggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    ||||||||||||||||||| |||| ||||||| |||||| ||| |||||||||||||||| | ||||| |||||||||| ||| |   || |||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttat 19929678  T
Q  603 tttgtaagttgacaatat--aataaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaa 691  Q
    ||  ||||||||||||||  ||||||  |||||||||       || ||||||||||||||||||||||||||||  |||| ||||||| ||||||||||    
T  19929677 tt--taagttgacaatataaaataaaagagataagggttaaagatttcaatttttatctgtttgcaacagagcaa-attacatgtttttggttgcagaaa 19929581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 696
Target Start/End: Complemental strand, 20829845 - 20829640
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| | |||||| ||||||| ||||||| | ||||||| |||| |||| || |||    
T  20829845 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcatta 20829747  T
Q  598 cttattttgtaagtt-gacaatataat-aaaagataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  |||||| ||| ||| ||| ||||||||||||         || |||||||||||||||||| ||| |||||| |||||||||||| |||||    
T  20829746 cttattt--taagttcgacgataaaataaaaagataagggttaagagatttacaatttttatctgtttgcgacatagcaag-ttacttgtttttggttgc 20829650  T
Q  687 agaaaagtaa 696  Q
    ||||| ||||    
T  20829649 agaaatgtaa 20829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 19092289 - 19092394
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| || || | ||||| ||||||||||||||||| || |||| ||    
T  19092289 gattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgct 19092388  T
Q  600 tatttt 605  Q
    ||||||    
T  19092389 tatttt 19092394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 595
Target Start/End: Complemental strand, 22176064 - 22175972
Alignment:
Q  504 taggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgt 595  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||| || |||  ||||||||||||||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcgt 22175972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 643 - 735
Target Start/End: Complemental strand, 24639415 - 24639324
Alignment:
Q  643 ttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| ||||||||||||||||||||||| ||||||  ||||||||||||||||||| ||| ||||||||| |||| |||||||||||||||    
T  24639415 ttttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattctttgaat-ccctctatttatatt 24639324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 509 - 590
Target Start/End: Complemental strand, 19374909 - 19374828
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||| |||||| ||||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatgtaagtagagtatcgtatccactgagattgtcgttttgtccaaacaatt 19374828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 704
Target Start/End: Complemental strand, 17951403 - 17951190
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||  |  || |||||||||| ||  |  ||||||||    
T  17951403 cggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgtta 17951304  T
Q  598 cttattttgtaagttgacaatat--aataaaaga---------taagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||||||| ||||  |||||||||         ||  | |||||||||||||||||||||||||||||||| |||| ||  ||| |||||    
T  17951303 cttattt--taagttgacgatataaaataaaagagtgacgggttagagattgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttgc 17951208  T
Q  687 agaaaagtaagcagcggt 704  Q
    ||||||| ||||||||||    
T  17951207 agaaaagcaagcagcggt 17951190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 732
Target Start/End: Complemental strand, 8969825 - 8969596
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||| ||||||||||||||  ||||  |||||||||||||||||||||| | |||||| |    |||| ||||||||||||||||||||| ||||||||    
T  8969825 attagacaagtgtaccaaattatttacaaagtaataaagtgtaagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttactta 8969726  T
Q  602 ttttgtaagttgacaatataataaaagataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
    ||||||   ||||| ||||||||||   ||||||       ||||||||| ||||| | |||||||||||||| ||||   |||||||||||| |  |||    
T  8969725 ttttgt--tttgacgatataataaa--ttaagggttagagattgcaatttatatctatatgcaacagagcaag-ttac--attttttgttgcaaattagt 8969633  T
Q  695 aagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||  ||| |||| ||||||||||||| ||||||||    
T  8969632 aagcaatggttaggactcttcgaatcccc-ctatttat 8969596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 492 - 605
Target Start/End: Complemental strand, 19636699 - 19636586
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||| |||| | ||||||||||||||||| |  ||||||||||||| |||||||||||| ||||| ||| ||||| ||||||| |||||||||||    
T  19636699 tgatgtgcgaattaagaaagtgtaccaaatcgtt-acaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaatt 19636601  T
Q  591 cgcgttacttatttt 605  Q
    |  ||||||||||||    
T  19636600 catgttacttatttt 19636586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 597
Target Start/End: Complemental strand, 9737616 - 9737512
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg------taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcg 592  Q
    ||||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||| | ||||| | |||||||| |||||||| |    
T  9737616 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaacaatttg 9737517  T
Q  593 cgtta 597  Q
    |||||    
T  9737516 cgtta 9737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 702
Target Start/End: Complemental strand, 17955255 - 17955044
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||  |  || |||||||||| ||  |  ||||||||    
T  17955255 cggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgtta 17955156  T
Q  598 cttattttgtaagttgacaatat--aataaaaga---------taagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  ||||||||| ||||  |||||||||         ||  | |||||||||||||||||||||||||||||||| |||| ||  ||| |||||    
T  17955155 cttattt--taagttgacgatataaaataaaagagtgatgggttagagattgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttgc 17955060  T
Q  687 agaaaagtaagcagcg 702  Q
    ||||||| ||||||||    
T  17955059 agaaaagcaagcagcg 17955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 509 - 604
Target Start/End: Complemental strand, 11521288 - 11521192
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| || | ||||| ||||||| || |||| |||| | ||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaactattcacattacttattt 11521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 11933414 - 11933517
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||| || ||||||||| |||||||| ||||| ||||| |||||||||  ||| | ||||| ||||||||||||||||| |||||||||||    
T  11933414 attaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttactt 11933512  T
Q  601 atttt 605  Q
    |||||    
T  11933513 atttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 499 - 603
Target Start/End: Original strand, 3774817 - 3774923
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggat--tatcgtttcgtccaaacaattcgcgtt 596  Q
    ||||||||||||||||| ||||| |||||  ||||||||||||| |||||||||||| |||||| | | ||  | ||||||| |||||||||||| ||||    
T  3774817 cggattaggcaagtgtatcaaattgtttactaagtaataaagtgcaagtagagtatcatatccacatgaattgtgtcgtttcatccaaacaattcacgtt 3774916  T
Q  597 acttatt 603  Q
    |||||||    
T  3774917 acttatt 3774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 22218703 - 22218636
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggatt 570  Q
    ||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22218703 ttaggtaactgtacaaaattgtttatcaagtaataaagtgtaagtagagtatcgtatccataaagatt 22218636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 25094587 - 25094782
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagttgacaatataat 623  Q
    |||||||||||||||  |||||||||||||| |||||| | ||||| |  |||||||||||||||||  |||||||| ||||||| ||| ||  |||||     
T  25094587 atcaagtaataaagttagtaagtagagtatcatatccacatggattgttctttcgtccaaacaattcttgttacttaattttgta-gttaacggtataa- 25094684  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
      ||| ||   |||||||||||||||||||||||||| ||| | ||||| |  |||| | || ||||||  |||||||||| ||||||||| ||||||||    
T  25094685 --aagtta---gttgcaatttttatctgtttgcaacaaagcgaatttacctagttttggatgtagaaaatcaagcagcggttaggattcttagaatcccc 25094779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 500 - 588
Target Start/End: Original strand, 15047121 - 15047210
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaa 588  Q
    |||||||| |||||| |||||||||||| |||||||||||||| ||||||||| |||||||| | | ||||| |||||||||| ||||||    
T  15047121 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15047210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 500 - 588
Target Start/End: Complemental strand, 15107303 - 15107214
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaa 588  Q
    |||||||| |||||| |||||||||||| |||||||||||||| ||||||||| |||||||| | | ||||| |||||||||| ||||||    
T  15107303 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 19900576 - 19900649
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| || || |||| |||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgtaagtagagtatcatattcacaaagattgtcgtt 19900649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 650 - 725
Target Start/End: Complemental strand, 12406650 - 12406575
Alignment:
Q  650 tgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctc 725  Q
    ||||||||| ||||| | ||||| ||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||    
T  12406650 tgtttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaacagcggttaggattcttcgaatcccctc 12406575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 732
Target Start/End: Complemental strand, 22357653 - 22357397
Alignment:
Q  488 ataatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagta---tcgtatccataaggattatcgtttcgtcca 583  Q
    |||||||||  | ||||||| |||||||| ||||| |||| |||||||||||||| |||||| ||||   ||||||||| | ||||| ||||||| |  |    
T  22357653 ataatgatggtcagattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcattta 22357554  T
Q  584 aacaattcgcgttacttattttgtaagttgacaatataataaa----agataagggtt-------gcaatttttatctgtttgcaacagagcaagtttac 672  Q
    |||| |||| |||||||||||   |||||||| |||||| |||    ||||||| |||       ||||||||||| ||||||||| | |||||||| ||    
T  22357553 aacagttcgtgttacttattta--aagttgacgatataaaaaataagagataagagttagagattgcaatttttatttgtttgcaatatagcaagtt-ac 22357457  T
Q  673 ttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||  ||||||||||| ||||| || | |||| | || |||||||| ||||||||    
T  22357456 ttgtttttgattgcagaaaaggaagcatcgtttaggactttttgaatcccccctatttat 22357397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 492 - 590
Target Start/End: Complemental strand, 24639567 - 24639469
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||| ||||||  ||||||| |||||| || | |||||||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||    
T  24639567 tgatgtgctgattagagaagtgtatcaaatcatt-accaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 24639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 25643460 - 25643518
Alignment:
Q  504 taggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  25643460 taggtaagtgtactaaatcgtttgtcaagtaataaagtgtaactagagtatcgtatcca 25643518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 10107007 - 10107080
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    ||||||||||||| ||||||||||| ||||||||||| || |||||||||||  |||||||| ||||| |||||    
T  10107007 ttaggcaagtgtagcaaatcgtttaccaagtaataaattgcaagtagagtattctatccatagggattgtcgtt 10107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 604
Target Start/End: Original strand, 22526369 - 22526462
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| | | ||| |||||||  |||||| ||  | |||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttattt 22526462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 682 - 734
Target Start/End: Original strand, 11935241 - 11935293
Alignment:
Q  682 gttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatat 734  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  11935241 gttgcagaaaagtaatcagtggttaggattcttcgaatcccctctatttatat 11935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 636 - 723
Target Start/End: Complemental strand, 26115865 - 26115780
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |||||||||||||||||||||||||||| ||| |||| || |||| |||||| ||| || ||||||||| |||||||||| |||||||    
T  26115865 ttgcaatttttatctgtttgcaacagagtaag-ttacctg-ttttggttgcataaatgttagcagcggttaggattcttcaaatcccc 26115780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 500 - 604
Target Start/End: Complemental strand, 11700675 - 11700571
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||| |||||||||||||| ||||| ||||||||||| || ||| |||||||||||||||| || |||| || ||||||  |||||||| | |||||    
T  11700675 ggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccacaa-gattgtcttttcgtttaaacaatttgtgttac 11700577  T
Q  599 ttattt 604  Q
     |||||    
T  11700576 ctattt 11700571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 22345017 - 22345090
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    |||||||| || ||| |||| ||||||||||||||||| ||| ||||||||||||||||| | ||||| |||||    
T  22345017 ttaggcaaatgcacctaatcatttatcaagtaataaagagtatgtagagtatcgtatccacatggattgtcgtt 22345090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 554
Target Start/End: Original strand, 12318425 - 12318481
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtat 554  Q
    |||||||||||||||||||||||| || | |||||||||||||| ||||||||||||    
T  12318425 cggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 679
Target Start/End: Complemental strand, 9264966 - 9264923
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgtttt 679  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  9264966 ttgcaatttttatctgtttgcaacagagaaagtttacgtgtttt 9264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 550
Target Start/End: Complemental strand, 15050185 - 15050138
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtaga 550  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  15050185 ttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtaga 15050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 550
Target Start/End: Original strand, 15104239 - 15104286
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtaga 550  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  15104239 ttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtaga 15104286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 604
Target Start/End: Complemental strand, 12839886 - 12839781
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||| |||||||| |||||| ||| ||| ||||||| || || ||||||||||||||||| ||||||| || ||||   | |||||||||| |||     
T  12839886 ggattaggaaagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccacaaggattgtcatttcaatctaacaattcgcattaa 12839787  T
Q  599 ttattt 604  Q
    ||||||    
T  12839786 ttattt 12839781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 492 - 538
Target Start/End: Original strand, 11935176 - 11935221
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataa 538  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  11935176 tgatgtgcggattaggctagtgtaccaaatcg-ttaccaagtaataa 11935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 604
Target Start/End: Original strand, 23080334 - 23080439
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||  |||||||| ||||  |||| ||| |||||| ||| |||||||| ||| |||| || | ||||| |||||||  |||||||||| |||||||    
T  23080334 ggattagataagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttac 23080433  T
Q  599 ttattt 604  Q
    ||||||    
T  23080434 ttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 562
Target Start/End: Complemental strand, 40215414 - 40215361
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    |||||||||| || ||||| ||| ||||||||| |||||||| |||||||||||    
T  40215414 aagtgtaccagattgtttaccaaataataaagtttaagtagattatcgtatcca 40215361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 492 - 724
Target Start/End: Complemental strand, 13315105 - 13314865
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||| |||||||||| ||| |||| |||||||||||||| |||||| ||||||||||||| | ||||| | |||||||||||||||||    
T  13315105 tgatgtgcggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaatt 13315007  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagata--------agggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttg 682  Q
    ||||||||||||||| ||||||||| |||||||||||||||        || |||||||||||||| |||||||||| || ||| ||||| ||||||| |    
T  13315006 cgcgttacttattttataagttgacgatataataaaagataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttgg 13314907  T
Q  683 ttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    ||||||||||||||||| |||| | |||||||||||||||||    
T  13314906 ttgcagaaaagtaagcaacggttaagattcttcgaatcccct 13314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 492 - 735
Target Start/End: Complemental strand, 24114396 - 24114146
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||  | ||||| ||||||||||||||||| |    
T  24114396 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaact 24114297  T
Q  591 cgcgttactta-ttttgtaagttgacaatat--aataaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgt 683  Q
     |||||||||| |||||||||||||| ||||  || | |||    |||| |||||||||||||||||||||||| |||||||||||||| || |||| ||    
T  24114296 tgcgttacttatttttgtaagttgacgatataaaagataagggttataaaggttgcaatttttatctgtttgcagcagagcaagtttacctg-ttttggt 24114198  T
Q  684 tgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
      | ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  24114197 atctgaaaagtaagcagcggttaggattcttcgaatcccccctatttatatt 24114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 494 - 735
Target Start/End: Original strand, 24269585 - 24269833
Alignment:
Q  494 atgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgc 593  Q
    |||||| |||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| |    
T  24269585 atgtgcagattaggcaagtgtaccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcac 24269684  T
Q  594 gttactta-ttttgtaag-ttgacaatataataa--aaga----taagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttg 685  Q
     ||| ||| ||||||||| |||||  ||||| ||  ||||     ||  |||||||| ||||||||||||||||||||  ||||||| ||||||| ||||    
T  24269685 attatttatttttgtaagtttgacggtataaaaaataagagtttgaatagttgcaatctttatctgtttgcaacagag-tagtttacctgtttttggttg 24269783  T
Q  686 cagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  24269784 cagaaaagtaagcagcggttaggattcttcgaatcccccctgtttatatt 24269833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 530 - 735
Target Start/End: Original strand, 27659468 - 27659670
Alignment:
Q  530 aagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataataaaa 627  Q
    ||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||| | || |||||||||||| |||||||||| ||||||   ||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaagttgacgatataa---aa 27659564  T
Q  628 gataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctcta 727  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||||||  |||||||| | |||||||||     
T  27659565 gataagggttgcaattttaatctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcggt-tggattctttg-atcccctctg 27659662  T
Q  728 tttatatt 735  Q
    ||||||||    
T  27659663 tttatatt 27659670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 509 - 723
Target Start/End: Complemental strand, 17101990 - 17101779
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat-tttg 606  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||  | ||||||||| ||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttatatttg 17101891  T
Q  607 taagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtca 706  Q
    |||||||||  |   ||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||| ||| |    
T  17101890 taagttgacggt---ataaaagata--ggttccaatttttatctgtttgcaacagagcaagtttacctgtttttgattgcaaaaaagtaagcagtggtta 17101796  T
Q  707 ggattcttcgaatcccc 723  Q
    |||||| || |||||||    
T  17101795 ggattcatcaaatcccc 17101779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 490 - 715
Target Start/End: Complemental strand, 29382477 - 29382243
Alignment:
Q  490 aatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaa 588  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||| ||||||| |||||||||    
T  29382477 aatgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaa 29382378  T
Q  589 ttcgcgttactta-ttttgtaag-ttgacaatataa---taaaag---ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttt 680  Q
    || |||||||||| ||||||||| ||||| ||||||   | || |   | || | ||||||||||||||||||||||||| ||||||| ||| | |||||    
T  29382377 tttgcgttacttatttttgtaagtttgacgatataaaagttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctattttt 29382278  T
Q  681 tgttgcagaaaagtaagcagcggtcaggattcttc 715  Q
     ||||||||||||||||||| ||| ||||||||||    
T  29382277 ggttgcagaaaagtaagcagtggttaggattcttc 29382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 704
Target Start/End: Original strand, 14528141 - 14528354
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||| |  |||| ||||||||||||||||| || |||||    
T  14528141 cggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgtta 14528240  T
Q  598 cttattttgtaagttgacaatataa--taaaaga--taagggtt-------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    ||||||||  ||  |||| ||||||  ||||| |  ||||||||       |||||||||| |||||||||||| ||||||||  || |  ||| |||||    
T  14528241 cttatttt--aaactgacgatataaaataaaatagttaagggttagagattgcaatttttagctgtttgcaacaaagcaagttacctgg--tttggttgc 14528336  T
Q  687 agaaaagtaagcagcggt 704  Q
    ||||||||||||||||||    
T  14528337 agaaaagtaagcagcggt 14528354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 17976611 - 17976717
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| || |||| |||||||||| | ||| ||||| |||    
T  17976611 cggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcatta 17976710  T
Q  598 cttattt 604  Q
    |||||||    
T  17976711 cttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 509 - 735
Target Start/End: Complemental strand, 18448639 - 18448404
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttg 606  Q
    |||||||||||||| |||| |||||||||||||  ||| ||||| |||||||| |||  |||| |||||| ||||||||||||| ||||||||| ||||     
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttta 18448540  T
Q  607 taagttgacaatata----ataaaagat----aagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
    ||||||||| |||||    ||||| | |    |||  ||||| |||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||    
T  18448539 taagttgacgatataaaagataaatggttagaaagtcttgcagtttttatctgtttgcaacagagcaag-ttacctgtttttggttgcataaaagtaagc 18448441  T
Q  699 agcggtcaggattcttcgaatcccctctatttatatt 735  Q
    | |||| | ||||||| | |||||  |||| ||||||    
T  18448440 aacggttatgattctttgtatccctcctatatatatt 18448404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 502 - 700
Target Start/End: Original strand, 13697857 - 13698055
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||||||||||||||||||| ||| |||||||||      ||||||||||||||| ||||||| |||||||||||||||||   ||||||||||    
T  13697857 attaggcaagtgtaccaaatcgtttaccaattaataaagt------agagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttactta 13697950  T
Q  602 ttttgtaagttgacaatata----ataaaagataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaa 690  Q
    |||  ||||||||| |||||    | || |||||||||       ||||||||||||||| |||||||||||||||| |||| ||  ||| |||||||||    
T  13697951 ttt--taagttgacgatataaaatacaagagataagggttagagattgcaatttttatctctttgcaacagagcaag-ttacctg--tttggttgcagaa 13698045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 604
Target Start/End: Complemental strand, 30122261 - 30122156
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||| |||||| | ||||| || ||| ||||||||||||||| ||||    
T  30122261 cggattaggcaagtgtaccaaatcactttccaagtaataaagtgtaagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattac 30122162  T
Q  599 ttattt 604  Q
    ||||||    
T  30122161 ttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 605
Target Start/End: Complemental strand, 30806613 - 30806492
Alignment:
Q  490 aatgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccat-----aaggattatcgtttcgtcca 583  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||      ||||||| ||||||| ||||    
T  30806613 aatgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatcca 30806514  T
Q  584 aacaattcgcgttacttatttt 605  Q
    ||||||| ||||||||||||||    
T  30806513 aacaatttgcgttacttatttt 30806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 723
Target Start/End: Original strand, 34497109 - 34497340
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    |||||||||||| || ||||||||||| |||||||||||||| | ||||||||||||||||||||  || | |||||||||||||||||| | |||||||    
T  34497109 gattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttact 34497208  T
Q  600 tattttgtaagttgacaatat--aataaaaga--taaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||  ||| ||||| ||||  |||||||||  ||| ||        ||||||||||||||| ||||||||| |||| |||  || |  |||  |||||    
T  34497209 tattt--taaattgacgatataaaataaaagagttaaagggttagagattgcaatttttatctttttgcaacatagcatgttacctgg--tttgcttgca 34497304  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||||| ||||||| | ||||||||    
T  34497305 gaaaagtaagcagcggttaggattccttgaatcccc 34497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 492 - 735
Target Start/End: Complemental strand, 24110769 - 24110532
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||||||| || |||||||||||||||||||| || |||| || ||| |||||||||| |    
T  24110769 tgatgtgcggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaacaagt 24110670  T
Q  591 cgcgttacttattttgtaagttgacaatataataaaagataagg---------gttgcaatttttatctgtttgcaacagagcaagtttacttgtttttt 681  Q
               |||||||||||||| ||   |||||| ||||||         ||||||| ||||||||||||||||||||| |||||||  || ||||     
T  24110669 -----------ttttgtaagttgacgat---ataaaacataagggttagaaaagttgcaa-ttttatctgtttgcaacagaggaagtttatctg-ttttg 24110586  T
Q  682 gttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||||||| ||| |||||| ||||||||||| || ||||||||    
T  24110585 gttgcagaaaagtaagcaggggttaggattattcgaatcccccctgtttatatt 24110532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 31288354 - 31288454
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||| || ||||  |||||  |||||||||| ||||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgtaagtaaagtatcgtatccatagggattgtcttttcaaccaaatcattcgcgttaattat 31288453  T
Q  603 t 603  Q
    |    
T  31288454 t 31288454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 24644832 - 24644935
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||| |||||||| ||||||  |||| |||||||||||||||||||||||||| ||||||| | ||||||||||||  |||||| ||||||| ||||||    
T  24644832 gattatgcaagtgtgccaaattatttaccaagtaataaagtgtaagtagagtattgtatccacatggattatcgttttttccaaataattcgcattactt 24644931  T
Q  601 attt 604  Q
    ||||    
T  24644932 attt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 513 - 724
Target Start/End: Complemental strand, 44011116 - 44010897
Alignment:
Q  513 gtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgt----- 607  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||| |||  |||| |||||| ||||| ||         
T  44011116 gtaccaaatcgtttacgaagtaataaagtgtaagtagagtatcgtatccacatggattgtcgtttcgtcaaaatgattcacgttacatatttggtttaac 44011017  T
Q  608 aagttgacaatataa----taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
    ||  | | |||| ||    | || ||||  | ||||||||||||| ||||||||||||| |||| |||| ||||||| ||||||||| |||||| |||||    
T  44011016 aaaataaaaataaaagatttgaatgatagagattgcaatttttatatgtttgcaacagaacaag-ttacatgtttttggttgcagaagagtaagtagcgg 44010918  T
Q  704 tcaggattcttcgaatcccct 724  Q
    | | ||||||||||| |||||    
T  44010917 ttaagattcttcgaaccccct 44010897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 512 - 605
Target Start/End: Original strand, 2637603 - 2637697
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||||| |||||| || |||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 5850933 - 5851039
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |  |||| |||||||  ||||||||| || ||||    
T  5850933 cggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgtta 5851032  T
Q  598 cttattt 604  Q
    |||||||    
T  5851033 cttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 723
Target Start/End: Complemental strand, 25182535 - 25182302
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgt-aagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||| |||||||  |||| ||| ||||||||||  |||||||||||||||| || | ||||| || ||||||| ||||   | ||||||    
T  25182535 cggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgtta 25182436  T
Q  598 cttattttgtaagttgacaatataa--taaaaga--taagggtt-------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    ||||||||  |||||||| ||||||  |||||||  ||||||||       ||||||||||||| |||||||||||||||| |||| ||||||| |||||    
T  25182435 cttatttt--aagttgacgatataaaataaaagagataagggttagagattgcaatttttatctatttgcaacagagcaag-ttacctgtttttggttgc 25182339  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||| || ||| ||| |||| |||| ||||||||    
T  25182338 agaaaaggaaacagtggttaggactctttgaatcccc 25182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 506 - 701
Target Start/End: Original strand, 17509246 - 17509447
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||| ||||||||| ||||| | |||||||||||||| ||||||||||||| |||||| | ||||| |  ||||||||||||||||| | ||||||| ||    
T  17509246 ggcacgtgtaccaa-tcgttaaccaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttattt 17509344  T
Q  604 ttgtaagttgacaatataataa--aag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    || |||||||||  ||||| ||  |||    | |||  |||||||||| | |||||||||| ||||||||||||| || ||||||||||| |||||||||    
T  17509345 ttataagttgacggtataaaaattaagggttaaaagacttgcaattttcacctgtttgcaatagagcaagtttacctg-tttttgttgcaaaaaagtaag 17509443  T
Q  698 cagc 701  Q
    ||||    
T  17509444 cagc 17509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 19786723 - 19786830
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||  ||||| |||||| |||||||| ||| | ||||||||||||||||| ||| ||||    
T  19786723 cggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgtta 19786822  T
Q  598 cttatttt 605  Q
    ||| ||||    
T  19786823 cttgtttt 19786830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 499 - 696
Target Start/End: Original strand, 6884950 - 6885155
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||| ||||||| || | |||||||||||| ||||| |||||||||||| | | ||||| ||||||||||||||||| | ||| ||    
T  6884950 cggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgcta 6885048  T
Q  598 cttattttgtaag-ttgacaatataataaa-agataaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  |||| ||||| ||| |||||| |||||||||         |||||||||||||||||||| || |||| ||| |||| ||||||| |||||    
T  6885049 cttattt--taagtttgacgataaaataaagagataagggtttagagatttgcaatttttatctgtttgtaatagagtaag-ttacctgtttttggttgc 6885145  T
Q  687 agaaaagtaa 696  Q
    ||||| ||||    
T  6885146 agaaatgtaa 6885155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 603
Target Start/End: Original strand, 15238794 - 15238896
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||||||||||||| ||||| ||||| ||||||| ||| || |||||||| ||||||||||| | | ||| |||||||||| ||||||||||||||||||    
T  15238794 attaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttactt 15238893  T
Q  601 att 603  Q
    |||    
T  15238894 att 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 546 - 725
Target Start/End: Original strand, 16403952 - 16404127
Alignment:
Q  546 gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataataaaagataagggttgcaattt 644  Q
    ||||||||||||||||| | ||||| || |||||||| ||||||||  |||||||||||| |||||||  ||   || ||||||  |   ||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagttttcacggta-taaaagtga---gttgcaattt 16404047  T
Q  645 ttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctc 725  Q
    |||| ||||||||||||||| | ||||| | ||||  | ||||||||| ||||||||||| ||||||||||||||||||||    
T  16404048 ttatttgtttgcaacagagcgaatttacctattttg-gctgcagaaaaataagcagcggttaggattcttcgaatcccctc 16404127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 508 - 605
Target Start/End: Original strand, 25226137 - 25226235
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||  | | ||||||| ||||| ||||||||||| ||||||| ||||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatatttt 25226235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 604
Target Start/End: Original strand, 24904630 - 24904731
Alignment:
Q  504 taggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttat 602  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||||||||||| |||||| |  |||| |||||||||| ||||||||| | ||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttat 24904729  T
Q  603 tt 604  Q
    ||    
T  24904730 tt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 741
Target Start/End: Original strand, 21314645 - 21314865
Alignment:
Q  529 caagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatataataaaa 627  Q
    |||||||||||||| ||||||| |||||||||| | | ||||| ||||||||| |||||||| | |||||||||||||   ||||  |||||||||| ||    
T  21314645 caagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattttt--agttaccaatataatagaa 21314742  T
Q  628 ga--taagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcga 717  Q
    ||  ||| ||||        ||||| |||||||| || ||| ||||||||||| | ||||||| ||| || ||||||||| |||||| |||| | |||||    
T  21314743 gagttaaaggttagaagtttgcaatatttatctgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttaggagtattcga 21314842  T
Q  718 atcccctctatttatattcttcga 741  Q
    |||||| ||||| |||||||||||    
T  21314843 atcccc-ctattgatattcttcga 21314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 651 - 735
Target Start/End: Complemental strand, 26394644 - 26394562
Alignment:
Q  651 gtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||| ||||||||||| ||||||  |||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  26394644 gtttgcaacaaagcaagtttacctgttttg-gttgcagaaaagtaagcaacggttaggattcttcgaatcccc-ctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 545 - 713
Target Start/End: Original strand, 14626069 - 14626244
Alignment:
Q  545 agtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatataataaaagataagggtt------- 637  Q
    ||||| ||||| |||||||| |||||  | |||||||||||||| | | |||||||||||| || |||||  ||||||||||| |||||||||           
T  14626069 agtagggtatcctatccatagggattgacttttcgtccaaacaacttgtgttacttatttttta-gttgaagatataataaaatataagggttagagagt 14626167  T
Q  638 -gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattct 713  Q
     ||||||||||| |||||| |  |||||| |||||| | ||||| |||||||||||||||||||| || ||||||||    
T  14626168 tgcaatttttatgtgtttggattagagcatgtttacctttttttggttgcagaaaagtaagcagcagttaggattct 14626244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 19264062 - 19264259
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataata 624  Q
    |||||||||||||||| |||||  |||||||||| |||| ||||| |  |||| || ||  ||||| ||||||||||||| |||||||    || | |||    
T  19264062 atcaagtaataaagtgataagttaagtatcgtattcatatggattgttctttcatcaaattaattctcgttacttatttttgtaagtttg--atgttata 19264159  T
Q  625 aaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||| ||||  ||| ||||||||||| ||||||||||||||||||||  | ||||| |||| | ||| |||||||||||| ||| || ||||||||||||    
T  19264160 aaagttaag--ttgtaatttttatctttttgcaacagagcaagtttatctatttttggttgaaaaaaggtaagcagcggtaaggctttttcgaatcccct 19264257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 634
Target Start/End: Complemental strand, 28276864 - 28276730
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||| ||||||||||| ||| ||| |||||| ||||| |||||||||||||||| ||||||| |||| ||||||| || ||   |||    
T  28276864 cggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatccatagggattatagttttgtccaaataactcctctta 28276766  T
Q  598 cttattttgtaagttgacaatataataaa-agataagg 634  Q
    |||||||   |||||||||||| |||||| ||||||||    
T  28276765 cttattt--gaagttgacaataaaataaagagataagg 28276730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 635 - 704
Target Start/End: Original strand, 18569192 - 18569260
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    ||||| |||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||    
T  18569192 gttgctatttttatctgtttgcaacatagcgagtttacttg-ttttggttgcagaaaagtaagcagcggt 18569260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 14075590 - 14075692
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||| || ||||||||||| |||| ||||||| |||||| |||||||| ||||||||||| | ||||| |||||||  |||||||||  ||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttactta 14075689  T
Q  602 ttt 604  Q
    |||    
T  14075690 ttt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 576
Target Start/End: Complemental strand, 24119871 - 24119798
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    |||| ||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||| | ||||| |||||    
T  24119871 ttagacaagtgtgccaaatcgtttaccaagttataaagtgtaagtagagtattgtatccacatggattttcgtt 24119798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 501 - 604
Target Start/End: Complemental strand, 5053026 - 5052923
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||||||||||| ||||||| | | ||| | ||| |||| ||||||||| || ||||    
T  5053026 gattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccacatgaatt-ttgttgcgtctaaacaattcacgctact 5052928  T
Q  600 tattt 604  Q
    |||||    
T  5052927 tattt 5052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 506 - 561
Target Start/End: Original strand, 17972171 - 17972225
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcc 561  Q
    |||||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  17972171 ggcaagcgtaccaaatcatt-atcaagtaataaagtgtaagtagagtatcgtatcc 17972225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 722
Target Start/End: Complemental strand, 23893175 - 23893089
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||| |||||||||||||||  ||  || ||||||||| |||||||    
T  23893175 gttgcaatttttatctgtttgcaacaaagcaaatttacctg-ttttggttgcagaaaagtaactagtagttaggattctttgaatccc 23893089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 30783835 - 30783784
Alignment:
Q  512 tgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatcca 562  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 30783784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 26008019 - 26008077
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatc 560  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatc 26008077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 732
Target Start/End: Original strand, 7983720 - 7983813
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||||||||||||||| ||| ||||||||  || |  ||| |||||||||||||||||| |||  ||||||||| |||||||| ||||||||    
T  7983720 ttgcaatttttatctgtttgcgacatagcaagttgcctgg--tttggttgcagaaaagtaagcaacgggtaggattctttgaatcccc-ctatttat 7983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 12268193 - 12268266
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    ||||||||||| |||||||  ||||||||||||||||||||||  ||||||||||||  ||||| ||| |||||    
T  12268193 ttaggcaagtgcaccaaataatttatcaagtaataaagtgtaaacagagtatcgtatttataagaattgtcgtt 12268266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 637 - 723
Target Start/End: Original strand, 9642018 - 9642102
Alignment:
Q  637 tgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||| ||||||||||||||  ||||||| |||| |||||||||| || ||||||||| |  |||||| ||||||||    
T  9642018 tgcaatttttatctgcttgcaacagagcaa-attacttg-ttttagttgcagaaatgttagcagcggttaaaattctttgaatcccc 9642102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 500 - 542
Target Start/End: Original strand, 30235370 - 30235412
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg 542  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  30235370 ggattaggcaagtgtacaaaatcgtttaccaagtaataaagtg 30235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 678
Target Start/End: Complemental strand, 5052875 - 5052844
Alignment:
Q  647 atctgtttgcaacagagcaagtttacttgttt 678  Q
    ||||||||||||||||||||||||||||||||    
T  5052875 atctgtttgcaacagagcaagtttacttgttt 5052844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 492 - 538
Target Start/End: Original strand, 14628361 - 14628407
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataa 538  Q
    ||||||||| ||||||||||| ||||||||| |||| ||||||||||    
T  14628361 tgatgtgcgaattaggcaagtttaccaaatcatttaccaagtaataa 14628407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 669
Target Start/End: Original strand, 19786870 - 19786903
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtt 669  Q
    ||| ||||||||||||||||||||||||||||||    
T  19786870 ttgtaatttttatctgtttgcaacagagcaagtt 19786903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 505 - 715
Target Start/End: Original strand, 69911 - 70129
Alignment:
Q  505 aggcaagtgtaccaaatcgtttatcaagtaataaagtgt-aagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-t 602  Q
    |||||||||||||||||| |||| ||||||||||||||  ||||| |||||||||| || ||||||| |||||||||||||||||||| ||||||||| |    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatt 70010  T
Q  603 tttgtaagttgacaatataata---aaag---ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaa 696  Q
    |||||| |||||  |||||| |   ||||   | || ||||||||||||||| ||||||||| ||||||||||||| ||||||| |||| ||||||||||    
T  70011 tttgtatgttgatgatataaaagataaaggttagaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaa 70110  T
Q  697 gcagcggtcaggattcttc 715  Q
    ||||| || ||||||||||    
T  70111 gcagcagttaggattcttc 70129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 7e-42; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 508 - 723
Target Start/End: Complemental strand, 24245642 - 24245418
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||  ||||||| ||| || ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| ||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttattttt 24245543  T
Q  606 gtaagttgacaatata----ataaaag----ataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaag 697  Q
    ||||||||| ||||||    |||||||    | || |||| | |||||||| ||||| ||||| ||||||||||| || |||| ||||||||||||||||    
T  24245542 gtaagttgagaatataaaagataaaagggttagaaaggtttcgatttttatttgtttccaacaaagcaagtttacctg-ttttagttgcagaaaagtaag 24245444  T
Q  698 cagcggtcaggattcttcgaatcccc 723  Q
    || |||| ||||||||||||||||||    
T  24245443 caacggttaggattcttcgaatcccc 24245418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 502 - 607
Target Start/End: Complemental strand, 24267058 - 24266953
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  24267058 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactta 24266959  T
Q  602 ttttgt 607  Q
    ||||||    
T  24266958 ttttgt 24266953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 502 - 607
Target Start/End: Complemental strand, 24343689 - 24343584
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  24343689 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactta 24343590  T
Q  602 ttttgt 607  Q
    ||||||    
T  24343589 ttttgt 24343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 493 - 622
Target Start/End: Complemental strand, 25550617 - 25550487
Alignment:
Q  493 gatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||| | ||||| || |||||||||||||||||    
T  25550617 gatgtgcagattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattc 25550518  T
Q  592 gcgttacttattttgtaagttgacaatataa 622  Q
      |||||||||||||||||||||| ||||||    
T  25550517 ttgttacttattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 506 - 723
Target Start/End: Complemental strand, 15375982 - 15375769
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    |||||||||||||||||||||| ||| ||||||| || ||||||||||||| |||||| | ||||| |||||||||||||| |||| || ||||||| ||    
T  15375982 ggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttattt 15375883  T
Q  604 ttgtaagttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
    ||| ||||||||  ||||| |  |||      ||||||||||||| ||||||||||||||||||||  | | ||||| |||||| ||||||||| | |||    
T  15375882 ttgcaagttgacggtataaaattaga------ttgcaatttttatttgtttgcaacagagcaagttcgcctatttttggttgcataaaagtaagtaacgg 15375789  T
Q  704 tcaggattcttcgaatcccc 723  Q
    | ||||||||||||||||||    
T  15375788 ttaggattcttcgaatcccc 15375769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 508 - 735
Target Start/End: Original strand, 17431884 - 17432119
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtgtaa-gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg 606  Q
    ||||||||| |||||||||| |||||||||||||| || ||||||||||||||||| |  |||| ||||||| ||||||||| || || ||||||||||     
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttattttt 17431983  T
Q  607 -taagtt--gacaatataata---aaagat--aagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagc 698  Q
     ||||||  | | |||||| |   || | |  ||| |||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  17431984 ataagttttggcgatataaaatataagggttaaagagttgtaatttttttctgtttgcaacagagcaagtttacttgttttg-gttgcagaaaagtaagc 17432082  T
Q  699 agcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||| |||||||||||||| |||| | ||||||||    
T  17432083 agcggttaggattcttcgaataccctatgtttatatt 17432119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 607
Target Start/End: Complemental strand, 18208355 - 18208247
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||  |||||    
T  18208355 cggattaggcaagtgtaccaaatcgtttacaaagtaataaagtgtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttac 18208256  T
Q  599 ttattttgt 607  Q
    |||||||||    
T  18208255 ttattttgt 18208247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 506 - 722
Target Start/End: Complemental strand, 20315529 - 20315305
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||    
T  20315529 ggcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattt 20315431  T
Q  605 t--gtaagttgacaatataa----taaaagataagg---gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    |   ||||||||| ||||||    |||  ||||| |    ||||||||||||||||||||||||| ||||||||||| || |||| |||||| || ||||    
T  20315430 ttattaagttgacgatataaaatttaagggataaagaaacttgcaatttttatctgtttgcaacaaagcaagtttacatg-ttttggttgcaaaatagta 20315332  T
Q  696 agcagcggtcaggattcttcgaatccc 722  Q
    || |||| | ||| |||||||||||||    
T  20315331 agaagcgattagggttcttcgaatccc 20315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 527 - 732
Target Start/End: Complemental strand, 20564160 - 20563957
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataa 622  Q
    |||||||||||||||  ||||||||||||||||||||| | ||||| |  ||||||||||||  |||  |||||||||||| ||||||| |||  |||||    
T  20564160 atcaagtaataaagttagtaagtagagtatcgtatccacatggattgttctttcgtccaaacgcttctagttacttatttttgtaagtttgacggtataa 20564061  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
       |||  |   |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| || ||||||||||||||| |    
T  20564060 ---aagtga---gttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaagtaagaagcagttaggattcttcgaatcac 20563967  T
Q  723 ctctatttat 732  Q
    |||| |||||    
T  20563966 ctctgtttat 20563957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 499 - 696
Target Start/End: Original strand, 18937740 - 18937945
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| || | ||||| | |||||||||||||||||| |||||    
T  18937740 cggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaattcacgtta 18937838  T
Q  598 cttattttgtaagttgacaatat--aataaa-agataagggttg--------caatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    |||||||  |||||| |  ||||  |||||| || |||||||||        ||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  18937839 cttattt--taagttaatgatataaaataaagagttaagggttgagagatttcaatttttatctgtttgcaacagagcaag-ttacatgtttttggttgc 18937935  T
Q  687 agaaaagtaa 696  Q
    ||||| ||||    
T  18937936 agaaatgtaa 18937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 36175126 - 36175232
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||  |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||   |||||||    
T  36175126 cggattaaacaagtgtaccaaatcgtttaccaagtaataaagtgtttgtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttac 36175225  T
Q  599 ttatttt 605  Q
    |||||||    
T  36175226 ttatttt 36175232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 509 - 694
Target Start/End: Original strand, 34487640 - 34487832
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgta 608  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||| |||||| | ||||| |||||||||| |||||||||||||||||||||||||     
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtgtaagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattttgt- 34487738  T
Q  609 agttgacaatataat-----aaaagataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagt 694  Q
      ||||| |||||||     ||||||||||||       ||||||||||||||||||| ||||||||||| ||||| ||  ||| |||||||||||||    
T  34487739 -tttgacgatataataataaaaaagataagggttagagattgcaatttttatctgttttcaacagagcaa-tttacatg--tttggttgcagaaaagt 34487832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 527 - 728
Target Start/End: Complemental strand, 16523870 - 16523672
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagtt-gacaatataa 622  Q
    |||||||||||||||  ||||||||||||| ||||||| | || || || |||||||| |||||||   |||||||| ||||||||||| |||| | |||    
T  16523870 atcaagtaataaagttcgtaagtagagtattgtatccacagggtttgtcctttcgtccgaacaattattgttacttagttttgtaagtttgacagtttaa 16523771  T
Q  623 taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
       ||| ||   |||||||||||||||||||||||||||||| | ||||| |||||||||||  |||||||||||||||||| ||||||||| |||||||    
T  16523770 ---aag-ta---gttgcaatttttatctgtttgcaacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaatccc 16523678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 506 - 721
Target Start/End: Original strand, 24140442 - 24140658
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||   ||||| || |||||||||||||||||||||||| |||||    
T  24140442 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattt 24140540  T
Q  605 t--gtaagttgacaatataa---taaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagca 699  Q
    |   |||||| || ||||||   | ||||   ||  || |||||||||||||| ||| ||||||||||||||| |  |||| ||||||||||||||||||    
T  24140541 ttattaagttaacgatataagggttaaag---agacttccaatttttatctgtgtgcgacagagcaagtttacct-attttggttgcagaaaagtaagca 24140636  T
Q  700 gcggtcaggattcttcgaatcc 721  Q
     |||| |||||||||| |||||    
T  24140637 acggttaggattcttcaaatcc 24140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 506 - 671
Target Start/End: Complemental strand, 19004326 - 19004153
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    ||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||| || ||| ||||||||||||| ||||||||| ||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttattt 19004227  T
Q  604 ttgtaag-ttgacaatataataaaagataagg--------gttgcaatttttatctgtttgcaacagagcaagttta 671  Q
    ||||||| ||||| ||   |||||||||||||        ||||||||||||||||||||||||||| |||||||||    
T  19004226 ttgtaagtttgacgat---ataaaagataagggttaaatagttgcaatttttatctgtttgcaacagggcaagttta 19004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 17171660 - 17171553
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| | ||||| |||||||||| || ||||||||||||    
T  17171660 cggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgtta 17171561  T
Q  598 cttatttt 605  Q
     |||||||    
T  17171560 attatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 635 - 735
Target Start/End: Complemental strand, 20744631 - 20744532
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatat 734  Q
    |||||||||||||||||||||||||| ||||||||||| || |||| |||| |||||||||||||||||| |||||||||||||||||  || |||||||    
T  20744631 gttgcaatttttatctgtttgcaacatagcaagtttacctg-ttttggttgtagaaaagtaagcagcggttaggattcttcgaatcccacctgtttatat 20744533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 22755513 - 22755620
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    |||||||| |||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||||||| ||||||| ||||||||||| || |||    
T  22755513 cggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcatta 22755612  T
Q  598 cttatttt 605  Q
     |||||||    
T  22755613 tttatttt 22755620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 26120860 - 26120963
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||||| ||||||||||||| ||||| || |||||||||| ||||||||||||| ||| || ||||||| ||||||||||||||||||| || |||||||    
T  26120860 attaggaaagtgtaccaaattgtttaccatgtaataaagtttaagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattactta 26120959  T
Q  602 tttt 605  Q
    ||||    
T  26120960 tttt 26120963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 527 - 726
Target Start/End: Complemental strand, 20549784 - 20549589
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagttgacaatataat 623  Q
    ||||||||||||| |  ||||||||||||||||||||| | ||||| || |||||||| ||||||||  |||||||||||| ||| |||   |||   ||    
T  20549784 atcaagtaataaaattagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtaggtt---aatggtat 20549688  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||| ||   ||||||||||||| |||||| ||||||||  | ||||| ||||||| |||||||  |||||||||||||| ||||||||||||| ||||    
T  20549687 aaaag-ta---gttgcaatttttacctgtttacaacagagtgattttacctgtttttggttgcaggcaagtaagcagcggttaggattcttcgaaacccc 20549592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 15469928 - 15470034
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| | | ||| |||||||||| ||||||||| || ||    
T  15469928 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaattcacgcta 15470027  T
Q  598 cttattt 604  Q
     ||||||    
T  15470028 tttattt 15470034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 500 - 732
Target Start/End: Original strand, 15690771 - 15691008
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||| |||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||  || ||| ||||||||||||| |||||| ||||||    
T  15690771 ggattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttac 15690869  T
Q  599 ttattttgtaagttgacaatataataaaagat---aagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgca 687  Q
    |||||||   |||||||||   |||||||||    |||||||        ||||||||||| |||| | |||||||||| || || ||||||  ||||||    
T  15690870 ttattttt--agttgacaaataaataaaagagttaaagggttagagatttgcaatttttatttgttcgtaacagagcaaatt-acctgttttg-gttgca 15690965  T
Q  688 gaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    |||||||||||||  || |||||||||||||||||| ||||||||    
T  15690966 gaaaagtaagcag-tgttaggattcttcgaatcccc-ctatttat 15691008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 26110568 - 26110462
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||| | ||||| | ||||| ||||| ||||| | |||||    
T  26110568 cggattaggcaagtgtaccgaatcgtttatcaagtaataaaatgtaagtagagtataatatccacagggatttttgtttcatccaatcaatttgtgttac 26110469  T
Q  599 ttatttt 605  Q
     ||||||    
T  26110468 atatttt 26110462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 601
Target Start/End: Complemental strand, 26121430 - 26121328
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| | ||||| | ||||| |||||  |||| | |||||    
T  26121430 cggattaggcaagtgtaccaaatcgtttagcaagtaataaaatgtaagtagagtatagtatccacagggatttttgtttcatccaataaatttgtgttac 26121331  T
Q  599 tta 601  Q
    |||    
T  26121330 tta 26121328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 28664794 - 28664989
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    |||||||||||||||| ||||||||||||||||| |||| ||| | || |||||| | |||||||| ||||||||||||| | ||||| |||  |||||     
T  28664794 atcaagtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttttgcaagtttgacggtataaa 28664893  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |     ||||  | ||||||||||||||||||||||||||| | ||||| || |||| ||||||||||| |||||| |||| | ||||||||||||||||    
T  28664894 at----taag--tcgcaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcagaaaaataagcaacggttaagattcttcgaatcccc 28664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 15544047 - 15544120
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| |||||||||||    
T  15544047 ttaggcaagtgtaccaaatcgtttaccaagtaataaactgtcagtagagtatcgtatacatagggattatcgtt 15544120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 622
Target Start/End: Complemental strand, 19283962 - 19283840
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||| ||||| || |||||||||| ||| |||||||||| |||||||||||| ||||||| ||| |||| |||||||||||||||||| || | |    
T  19283962 cggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaa 19283863  T
Q  598 cttattttgtaagttgacaatataa 622  Q
    |||||||  ||||||||| ||||||    
T  19283862 cttattt--taagttgacgatataa 19283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 492 - 629
Target Start/End: Complemental strand, 25402451 - 25402314
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaatt 590  Q
    ||||||||  |||||||||||||||||||| ||||  |||||||  ||||| |||||||||||| ||||||| | ||||| ||||||||||| ||  |||    
T  25402451 tgatgtgcaaattaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgatt 25402352  T
Q  591 cgcgttacttattttgtaag-ttgacaatataataaaaga 629  Q
    ||||||||||||||  |||| ||||||||| |||||||||    
T  25402351 cgcgttacttattt--taagtttgacaataaaataaaaga 25402314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 500 - 604
Target Start/End: Complemental strand, 24852278 - 24852173
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||||| ||| |||||| ||| ||||||||||| || |||||| ||||||||||||| | ||||| | |||||||| ||||||||| ||||||    
T  24852278 ggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttac 24852179  T
Q  599 ttattt 604  Q
    ||||||    
T  24852178 ttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 506 - 723
Target Start/End: Original strand, 34128636 - 34128860
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    |||||||||||||| ||||| | |||||||||||||| |||||||| ||||||||||| | | ||| || ||||||||||| ||||| |||| |||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttattt 34128734  T
Q  605 tg-taagttgacaatataataaaagataagggtt----------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaag 693  Q
    |  ||||||||   |||||   ||| ||||||||          | |||||| |  ||||||||| ||||||||||||| ||||||  ||||||||||||    
T  34128735 ttataagttgaaggtataa---aagttaagggttaaaaagacttgaaattttgacttgtttgcaatagagcaagtttacctgttttg-gttgcagaaaag 34128830  T
Q  694 taagcagcggtcaggattcttcgaatcccc 723  Q
    |||||| |||| ||||||||||||||||||    
T  34128831 taagcaacggttaggattcttcgaatcccc 34128860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 503 - 554
Target Start/End: Complemental strand, 32417458 - 32417407
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtat 554  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32417458 ttaggtaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtat 32417407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 508 - 724
Target Start/End: Complemental strand, 23388935 - 23388723
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||||||| | ||| | |||||||||||||| |||||||||||||||||||| | ||||| || |||||||| ||||||||  |||||||| ||||    
T  23388935 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 23388837  T
Q  606 gtaag-ttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    ||||| |||||  |    |||||| ||  |||||||||||| |||||||||||||||||| | ||||| ||  |||  ||| |||||   ||||||| ||    
T  23388836 gtaagtttgacggt---gtaaaagtta--ggttgcaattttcatctgtttgcaacagagcgaatttacctg-ctttgattggagaaagtaaagcagcagt 23388743  T
Q  705 caggattcttcgaatcccct 724  Q
     |||||||||||||||||||    
T  23388742 taggattcttcgaatcccct 23388723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 508 - 605
Target Start/End: Original strand, 39434464 - 39434561
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||||||||||| ||||||| ||||||||||| || ||||||||  |||||||||| | ||||| || ||| |||||||||||||||||||||||||||    
T  39434464 caagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttatttt 39434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 507 - 576
Target Start/End: Original strand, 28253281 - 28253350
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||| || | |||||||||||    
T  28253281 gcaaatgtaccaaatcgtttaccaagtaataaagtgtaagtagaatatcgtattcacagggattatcgtt 28253350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 726
Target Start/End: Complemental strand, 17315182 - 17314984
Alignment:
Q  524 tttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-ttttgtaagttgacaatata 621  Q
    ||||||||||||||||||| |||||| ||||||||||||| | ||||| || |||| ||| ||||||||  |||||||| |||||||||||     |       
T  17315182 tttatcaagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttatttttgtaagtt--tgttggt 17315085  T
Q  622 ataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcc 721  Q
    |||||||| |   ||| |||||||||||| ||||||| ||||| |  |||| || |||| |||||| |||||||||||||||| | ||||||| ||||||    
T  17315084 ataaaagaaa---gttacaatttttatctttttgcaatagagcgaagttacctg-ttttggttgcaaaaaagtaagcagcggttaagattctttgaatcc 17314989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 644 - 722
Target Start/End: Original strand, 26835796 - 26835872
Alignment:
Q  644 tttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
    ||||||||||||||||||||| | ||||| ||||||  |||||||||||||| ||||| || |||||||||||||||||    
T  26835796 tttatctgtttgcaacagagcgaatttacctgtttt--gttgcagaaaagtatgcagcagttaggattcttcgaatccc 26835872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 17185459 - 17185561
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||| ||||||||| ||||| |||| ||| |||||||||| |||||||||||||||||| | | ||||| |||||||  ||||||||||| |||||| ||    
T  17185459 ttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgta 17185558  T
Q  602 ttt 604  Q
    |||    
T  17185559 ttt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 589
Target Start/End: Complemental strand, 24167691 - 24167600
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaat 589  Q
    ||||||||| |||||||  |||||||||| ||||||||||||| |||||||||||||| |||  | | ||||| ||||||| ||||||||||    
T  24167691 cggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaat 24167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 542
Target Start/End: Complemental strand, 24662257 - 24662214
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  24662257 cggattaggtaagtgtaccaaatcgtttatcaagtaataaagtg 24662214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 492 - 561
Target Start/End: Original strand, 19051534 - 19051604
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatcc 561  Q
    |||||||||||||||  |||||||||||||||||||  ||||||||||||| ||||| |||| ||||||||    
T  19051534 tgatgtgcggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc 19051604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 636 - 729
Target Start/End: Original strand, 24260655 - 24260746
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatt 729  Q
    ||||||||||||||||||||||||||||||||||  ||   |||| |||||||||| || || |||||| | ||||| | ||||||||||||||    
T  24260655 ttgcaatttttatctgtttgcaacagagcaagttaccta--ttttggttgcagaaatgttaggagcggttatgattccttgaatcccctctatt 24260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 640 - 730
Target Start/End: Complemental strand, 26121280 - 26121191
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctattt 730  Q
    ||||||||||||||||||| ||||||||||  ||  ||||| ||| |||||||||||| || ||| ||||||||| |||||||| ||||||    
T  26121280 aatttttatctgtttgcaagagagcaagttatcta-tttttggttacagaaaagtaagtagtggttaggattctttgaatcccccctattt 26121191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 9521009 - 9521066
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtat 559  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||    
T  9521009 attaggcaagtgtaccaaatcgtttgtcaagtaataaggggtaagtaaagtatggtat 9521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 499 - 603
Target Start/End: Complemental strand, 19086286 - 19086181
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | | ||| | |||| ||| || ||||||  ||||    
T  19086286 cggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttttgtcaaatcaattcatgtta 19086187  T
Q  598 cttatt 603  Q
    ||||||    
T  19086186 cttatt 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 527 - 722
Target Start/End: Original strand, 20858705 - 20858896
Alignment:
Q  527 atcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt-gacaatataat 623  Q
    ||||||||||||| || ||||||||||||||||||||    |||| || ||| |||| ||||||||  |||||||||||| ||||||| |||  |||||     
T  20858705 atcaagtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataa- 20858803  T
Q  624 aaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatccc 722  Q
      ||| ||||  || ||||||||||| |||||||||| ||| | ||||| | ||||  |||||| |||||||||||||||| ||||||| |||||||||    
T  20858804 --aag-taag--ttacaatttttatcggtttgcaacaaagcgaatttacctattttg-gttgcataaaagtaagcagcggttaggattcgtcgaatccc 20858896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 604
Target Start/End: Original strand, 23265164 - 23265252
Alignment:
Q  517 caaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt 604  Q
    ||||| |||| |||||| |||||||| |||||| | ||||||||||||| ||||| || ||||  ||||||||||| ||||||||||||    
T  23265164 caaattgtttttcaagtgataaagtgataagtaaaatatcgtatccatatggattttcatttcaaccaaacaattcacgttacttattt 23265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 731
Target Start/End: Complemental strand, 24265435 - 24265342
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctattta 731  Q
    ||||||||||||||||||||||| | ||||||||  ||| |||   ||||||||||||||||||||||| |||| | || |||| ||| |||||||    
T  24265435 ttgcaatttttatctgtttgcaataaagcaagttaccttattta--gttgcagaaaagtaagcagcggttaggactatttgaattccccctattta 24265342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 731
Target Start/End: Complemental strand, 24342066 - 24341973
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctattta 731  Q
    ||||||||||||||||||||||| | ||||||||  ||| |||   ||||||||||||||||||||||| |||| | || |||| ||| |||||||    
T  24342066 ttgcaatttttatctgtttgcaataaagcaagttaccttattta--gttgcagaaaagtaagcagcggttaggactatttgaattccccctattta 24341973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 27921503 - 27921448
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtat 559  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||| |||||||||    
T  27921503 ttaggcaagtgtac-aaattgtttgtcaagtaataaagtgtaagtagtgtatcgtat 27921448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 24260560 - 24260615
Alignment:
Q  550 agtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||| ||||||| || ||||||||||| ||| |||||||||||||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttatttt 24260615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 562
Target Start/End: Original strand, 26307600 - 26307658
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatcca 562  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||  ||||||||||||    
T  26307600 ttaggcaagtgtaccaaattgtttattaagtaataaagt-taagtatcgtatcgtatcca 26307658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 20419951 - 20419991
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg 542  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtg 20419991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 570
Target Start/End: Complemental strand, 23380360 - 23380292
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggatt 570  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||||| | |||||||| |||| |||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggatt 23380292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 636 - 720
Target Start/End: Original strand, 36175272 - 36175354
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    ||||||||||||||||||| ||||| |||||| |||| || |||| |||| ||||||||||| |||||| | ||||||| |||||    
T  36175272 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 36175354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 576
Target Start/End: Complemental strand, 20534141 - 20534082
Alignment:
Q  517 caaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtt 576  Q
    |||||| |||| |||||||||||||||||||| |||||||||| | || ||||| |||||    
T  20534141 caaatcttttaccaagtaataaagtgtaagtaaagtatcgtatgcctagggattttcgtt 20534082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 577
Target Start/End: Original strand, 32581898 - 32581957
Alignment:
Q  518 aaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgttt 577  Q
    |||| ||||| ||||||||||||| ||||| ||||||| ||| |||||||||| ||||||    
T  32581898 aaattgtttagcaagtaataaagtataagttgagtatcttattcataaggattgtcgttt 32581957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 720
Target Start/End: Original strand, 39434601 - 39434676
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    |||||||||||||||||||||||        |||||| |||||| | ||||||||||||||||| |||| |||||||||||||||    
T  39434601 ttgcaatttttatctgtttgcaa--------gtttacctgttttgt-ttgcagaaaagtaagcaacggttaggattcttcgaatc 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 639 - 669
Target Start/End: Original strand, 22755664 - 22755694
Alignment:
Q  639 caatttttatctgtttgcaacagagcaagtt 669  Q
    |||||||||||||||||||||||||||||||    
T  22755664 caatttttatctgtttgcaacagagcaagtt 22755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 17769494 - 17769461
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaag 540  Q
    ||||||||||||||||||||| ||||||||||||    
T  17769494 gcaagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 723
Target Start/End: Complemental strand, 24662133 - 24662052
Alignment:
Q  639 caatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    |||||||||  |||||| ||||||||||||| |||||||||  ||||||| |||||||| |||||| | || ||||||| |||||    
T  24662133 caatttttagttgtttgaaacagagcaagtt-acttgtttt--gttgcagtaaagtaagtagcggttaagactcttcgattcccc 24662052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 509 - 735
Target Start/End: Complemental strand, 919 - 684
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg- 606  Q
    |||||||| |||||||| | |||||||||||||| |||||||||||||||||||||   |||| |||||||||||||||||| | |||||||||||||      
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattttta 821  T
Q  607 taagtt-gacaatataataaaagataagggtt----------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagta 695  Q
    |||||| ||| ||||||   ||||||||||||          |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  820 taagtttgacgatataa---aagataagggtttagaaagattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagta 724  T
Q  696 agcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    || |||||| | ||||||||||| ||||||| ||||||||    
T  723 agaagcggttaagattcttcgaaccccctctgtttatatt 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 497 - 741
Target Start/End: Original strand, 69072 - 69323
Alignment:
Q  497 tgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgt 595  Q
    |||||||||||||||||||||||||| || | |||||||||||||| ||||| ||| |||||||||| ||||||| ||  ||  ||||||||||| || |    
T  69072 tgcggattaggcaagtgtaccaaatcatt-accaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcat 69170  T
Q  596 tacttattttgtaagttgacaatataataaaaga-taagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgc 686  Q
    | ||||||||   |||||||||||||||||| || ||||||||        |||||||||||||||||||||||||| |||||||| |||| ||   |||    
T  69171 tgcttattttt--agttgacaatataataaacgagtaagggttatagaattgcaatttttatctgtttgcaacagagaaagtttacctgttcttacatgc 69268  T
Q  687 agaaaagtaagcagcggtcaggattcttcgaatcccctctatttatattcttcga 741  Q
    |||||| ||||||||||| ||||||||| |||| | | ||||||||||| |||||    
T  69269 agaaaaataagcagcggttaggattcttagaattcacactatttatattattcga 69323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 591
Target Start/End: Original strand, 81480 - 81571
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    ||||||||||||| ||| |||||||||| ||| |||||||||| ||||||| |||| ||||||| | ||||| | |||||||| ||| |||||    
T  81480 ggattaggcaagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtcaaaataattc 81571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 501 - 723
Target Start/End: Complemental strand, 168403 - 168173
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttact 599  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||||| ||||||| || ||| |  ||| ||||||    
T  168403 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca-caggattgtcgtttcttctaaatagctcgtgttact 168305  T
Q  600 tattttgtaagttgacaatat--aataaaag--ataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    |||||  ||||||||| ||||  ||||||||  |||||||       || ||||||||||||||||||||||||||||| |||||||||||| |||| ||    
T  168304 tattt--taagttgacgatataaaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaag-ttacttgtttttggttgtag 168208  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||| || || |||| |||| |||| ||||||||    
T  168207 aaaaggaaacaacggttaggactctttgaatcccc 168173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 636 - 735
Target Start/End: Original strand, 72148 - 72247
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||  || ||||||||||||||||||||| ||||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagtagtaaggattcttcgaatcccctctgtttatatt 72247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 559
Target Start/End: Original strand, 72060 - 72125
Alignment:
Q  495 tgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtat 559  Q
    |||| ||||| || ||||||||||||| ||| | |||||||||||||| |||||||||||| ||||    
T  72060 tgtgaggatttggtaagtgtaccaaattgttaaccaagtaataaagtgataagtagagtatggtat 72125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 491 - 732
Target Start/End: Original strand, 35521 - 35771
Alignment:
Q  491 atgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaat 589  Q
    ||||||||| ||||| |||| |||| | |||||||||||||||||||||||| ||| |||||||| ||||||| | ||||| ||||||||||||||||||    
T  35521 atgatgtgcagattatgcaaatgtatctaatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaat 35620  T
Q  590 tcgcgttacttattttgtaag-ttgacaatataataaaaga--taaggg---------ttgcaatttttatctgtttgcaacagagcaagtttacttgtt 677  Q
    |||| ||||||||||  |||| ||||  ||| |||||||||  ||| ||         ||||||||||||| ||| ||||||| |||||| |||| || |    
T  35621 tcgccttacttattt--taagtttgatgataaaataaaagagttaaagggttagagatttgcaatttttatttgtctgcaacaaagcaag-ttacctg-t 35716  T
Q  678 ttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||| |||||||||| |||||||||||| | |||||||| |||||||| |||||||    
T  35717 tttggttgcagaaaggtaagcagcggttaagattcttcaaatcccctatatttat 35771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 546 - 726
Target Start/End: Original strand, 482 - 658
Alignment:
Q  546 gtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt-gtaagtt--gacaatataataaaagataagggttgcaat 642  Q
    ||||||||||||||||| | ||||| || |||||||| ||||||||  |||| ||||||| |||||||  |||| |||||   ||| ||||  |||||||    
T  482 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagttttgacagtataa---aag-taag--ttgcaat 575  T
Q  643 ttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    |||||||||||||||||||||| | ||||| ||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  576 ttttatctgtttgcaacagagcgaatttacctgttttg-gttgcagaaaagtaagcagcggttaggattcttcgaatcccctct 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 722 - 828
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcg-cgttac 598  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| | ||||||| |||||||||||||||||| || ||||||    
T  722 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttac 821  T
Q  599 ttatttt 605  Q
    |||||||    
T  822 ttatttt 828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 502 - 605
Target Start/End: Complemental strand, 89957 - 89854
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||| | ||| ||| |||||||||| |||||| ||||||||||||    
T  89957 attagacaagtgtatcaaatcgtttaccaagtaataaagtgtaagtagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttactta 89858  T
Q  602 tttt 605  Q
    ||||    
T  89857 tttt 89854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 492 - 723
Target Start/End: Original strand, 3138 - 3369
Alignment:
Q  492 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaa-tt 590  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||| | ||||| || |||| |||||| || ||    
T  3138 tgatgtgcggattaggcaagtgtacaaaattgtttaccaagtaataaagtgtatgtagagtatcgtatccacacggattgtcatttcatccaaaaaattt 3237  T
Q  591 cgcgttacttattttgtaagttgacaatat-aataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcaga 689  Q
     | | |||  ||||| |    |||| |||| ||||||||||    |||||||||||||| |||||| || ||||||| ||||| ||||||| |||  |||    
T  3238 ggggatacaaatttt-tggtctgacgatataaataaaagatggaagttgcaatttttatttgtttgtaatagagcaa-tttacctgtttttggttataga 3335  T
Q  690 aaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||| | |||| || ||||||||    
T  3336 aaagtaagcagcggttatgattttttgaatcccc 3369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 635 - 724
Target Start/End: Complemental strand, 6067 - 5978
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  6067 gttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaagtaagtaacggtcaggattcttcgaatcccct 5978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 635 - 724
Target Start/End: Complemental strand, 6677 - 6588
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    |||||||||||||||||||||||| ||||  | ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  6677 gttgcaatttttatctgtttgcaatagagtgaatttacttgtttttggtttcaaaaaagtaagcagcggtcaggattcttcgaatcccct 6588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 507 - 722
Target Start/End: Original strand, 21277 - 21488
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||| ||||| |  ||||||||||||| ||||||||||||| |||||| | ||||| || |||||||| ||||||||  ||||| ||||||    
T  21277 gcaagtgtaccaa-tcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatatttt 21375  T
Q  606 -gtaagtt-gacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcgg 703  Q
     ||||||| |||  |||||   ||| ||||  ||||||||||||| |||||||||||||| |||||||| || |||| ||| |||||||||||| ||||     
T  21376 tgtaagtttgacggtataa---aagttaag--ttgcaatttttatttgtttgcaacagaggaagtttacctg-ttttggtttcagaaaagtaagtagcga 21469  T
Q  704 tcaggattcttcgaatccc 722  Q
    | |||||||||||||||||    
T  21470 ttaggattcttcgaatccc 21488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 635 - 726
Target Start/End: Original strand, 25112 - 25202
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccctct 726  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||  |||||||||||||||||| |||| |||||||||| ||||||||||    
T  25112 gttgcaatttttctctatttgcaacagagcaagtttacctgttttg-gttgcagaaaagtaagcaacggttaggattcttcaaatcccctct 25202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 732
Target Start/End: Original strand, 39576 - 39818
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaat-tcgcgtt 596  Q
    |||||||||||||||||| ||||  |||| |||||||||||||| ||||||||| |||||||||| |  |||| | |||| ||||||| ||  || | ||    
T  39576 cggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcacttt 39675  T
Q  597 acttattttgtaagttgacaatataa--taaaaga--taag-------ggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttg 685  Q
    |||||||||  |||||||| ||||||  |||||||  ||||       | |||||||||||||||||||||||||||||||| |||| || |||| ||||    
T  39676 acttatttt--aagttgacgatataaaataaaagagataagaattagagattgcaatttttatctgtttgcaacagagcaag-ttacctg-ttttggttg 39771  T
Q  686 cagaaaagtaagcagcggtcaggattcttcgaatcccctctatttat 732  Q
    ||||||||||||||||||| | || |||| |||||||| ||||||||    
T  39772 cagaaaagtaagcagcggttatgactctttgaatcccccctatttat 39818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 502 - 735
Target Start/End: Complemental strand, 36099 - 35857
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||||| ||| |||| ||||| ||||  ||||||||||||| |||||||||||||||||||| | | ||| ||||||| |||||| |||||| |||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttactt 36000  T
Q  601 attttgtaagtt-gacaatataataaaagat---aagggtt--------gcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcag 688  Q
    |||||  ||||| ||| ||| |||| ||||    |||||||        ||||||||||||| |||| |||| || ||||| || || |||| |||||||    
T  35999 atttt--aagtttgacgataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagtt-acctgattttggttgcag 35903  T
Q  689 aaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||    
T  35902 aaaagtaagcagcggttaggattcttagaatcccc-ctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 502 - 604
Target Start/End: Original strand, 6282 - 6385
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    |||||||||||||| |||||||||||  ||||||||||||  |||||| ||||||||||||| | ||||| | |||||||||||||||||||| ||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattactt 6381  T
Q  601 attt 604  Q
    ||||    
T  6382 attt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 726
Target Start/End: Original strand, 76437 - 76632
Alignment:
Q  527 atcaagtaataaagt--gtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatataata 624  Q
    |||||||||||||||  |||||||||||||| |||||| | ||||| |  |||||||| ||||||||  ||||||||||||   ||||||   |||||      
T  76437 atcaagtaataaagttagtaagtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttatttttgtagttgagggtataa-- 76534  T
Q  625 aaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
     ||| ||   ||||||| |||||| ||||| ||||| ||||| ||||| ||||||| |||| ||||||||||||| || | |||||||||||||||||||    
T  76535 -aagtta---gttgcaaattttatatgtttacaacatagcaaatttacctgtttttggttgtagaaaagtaagcaccgattaggattcttcgaatcccct 76630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 636 - 724
Target Start/End: Original strand, 15785 - 15872
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccct 724  Q
    ||||||||||||||  |||||||||||||||||| || ||||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagtt-acctgtttttggttgcggaaaagtaagcagcggttagtattcttcgaatcccct 15872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 509 - 605
Target Start/End: Original strand, 29909 - 30005
Alignment:
Q  509 aagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||| |||| ||   |||||||||  |||||||||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttatttt 30005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 526 - 692
Target Start/End: Complemental strand, 43307 - 43132
Alignment:
Q  526 tatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatat--aa 622  Q
    ||||||||||||||||| |||||| |||| |||||||| ||||||| |||||||||| |||||  ||| |||||||||||  ||| ||||| ||||  ||    
T  43307 tatcaagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattt--taaattgacgatataaaa 43210  T
Q  623 taaa--agataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaa 692  Q
    ||||  |||||||||       |||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||    
T  43209 taaaagagataagggttagagattgcaatttttatctgtttgcaacagagcaag-ttacctgtttttggttacagaaaa 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 735
Target Start/End: Original strand, 54852 - 55097
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcg-tttcgtccaaacaattcgcgtt 596  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| | ||||| ||| ||||||| ||| |  | |||||    
T  54852 cggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgtt 54951  T
Q  597 acttattttgtaagttgacaatata----ataaaagataaggg-------ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttg 685  Q
    ||||||||  |||||| || |||||    | ||||||||||||       || |||||||||| ||||||| ||| |||||| |||| ||||||| ||||    
T  54952 acttattt--taagttaacgatataaaataaaaaagataagggttagagattccaatttttatttgtttgcgacatagcaag-ttacctgtttttggttg 55048  T
Q  686 cagaaaagtaagcagcggtcaggattcttcgaatcccctctatttatatt 735  Q
    || ||||| || ||  ||| |||| |||| |||||||| |||||||||||    
T  55049 cacaaaagaaaacactggttaggactctttgaatcccc-ctatttatatt 55097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 506 - 615
Target Start/End: Complemental strand, 48290 - 48182
Alignment:
Q  506 ggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tt 603  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||  || ||||| ||  |||||||||||||||| | ||||||| ||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc--tatggattgtcaattcgtccaaacaattctc-ttacttattt 48194  T
Q  604 ttgtaagttgac 615  Q
    ||||||||||||    
T  48193 ttgtaagttgac 48182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 507 - 723
Target Start/End: Complemental strand, 488 - 263
Alignment:
Q  507 gcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattt- 604  Q
    ||||||||| || ||||||||  ||||||||||||| || ||||||||||||||| | | ||||| || ||||||||||||||||| |||||  |||||     
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatattta 389  T
Q  605 tgtaagttgacaatata----ataaaagat----aagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaa 696  Q
    | ||||||||| |||||    ||||| | |    |||  |||||||||||||||| |||||| |||||||| | || ||||||| |||  |||||  |||    
T  388 tataagttgacgatataaaagataaagggttagaaagtcttgcaatttttatctgcttgcaatagagcaag-taacctgtttttggttttagaaatataa 290  T
Q  697 gcagcggtcaggattcttcgaatcccc 723  Q
    ||||| || ||||||||||||||||||    
T  289 gcagccgttaggattcttcgaatcccc 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 508 - 606
Target Start/End: Original strand, 2371 - 2470
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg 606  Q
    |||||||||||||||||||| ||| |||||||| | |||||||||||||||||||| | |||||  | |||| ||||||||||| |||||| ||||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 508 - 606
Target Start/End: Original strand, 2402 - 2501
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttg 606  Q
    |||||||||||||||||||| ||| |||||||| | |||||||||||||||||||| | |||||  | |||| ||||||||||| |||||| ||||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 604
Target Start/End: Original strand, 78589 - 78692
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactt 600  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||||  || |||||||||||||||||| |||||||  | || |||| ||||||||||    
T  78589 attaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttcaacaaaccaatccgcgttactt 78688  T
Q  601 attt 604  Q
    ||||    
T  78689 attt 78692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 508 - 724
Target Start/End: Original strand, 3533 - 3745
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta-tttt 605  Q
    |||||||||||| | ||| | |||||||||||||| |||||||||||||||||||| | ||||| || |||||||| ||||||||  |||||||| ||||    
T  3533 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 3631  T
Q  606 gtaag-ttgacaatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggt 704  Q
    ||||| |||||  |    |||||| ||  |||||||||||| |||||||||||||||||| | ||||| ||  |||  ||| |||||   ||||||| ||    
T  3632 gtaagtttgacggt---gtaaaagtta--ggttgcaattttcatctgtttgcaacagagcgaatttacctg-ctttgattggagaaagtaaagcagcagt 3725  T
Q  705 caggattcttcgaatcccct 724  Q
     |||||||||||||||||||    
T  3726 taggattcttcgaatcccct 3745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 570
Target Start/End: Original strand, 12105 - 12173
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggatt 570  Q
    ||||||||||||||||||| ||||| ||||||||||| || |||||| | |||||||| |||| |||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggatt 12173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 500 - 604
Target Start/End: Complemental strand, 4589 - 4484
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    ||||||||||| |||||| ||||||||| ||||||| ||| || |||| ||||||||||||||| | ||||| || ||||||  |||||||||| |||||    
T  4589 ggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttac 4490  T
Q  599 ttattt 604  Q
    ||||||    
T  4489 ttattt 4484  T

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Target: scaffold0111 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 635 - 723
Target Start/End: Original strand, 3771 - 3859
Alignment:
Q  635 gttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatcccc 723  Q
    ||||||||||||||||| | |||||| || |||||||| | |||||  |||||||||||||||| ||||| |||||||||| |||||||    
T  3771 gttgcaatttttatctgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttaggattcttccaatcccc 3859  T

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Target: scaffold0427 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 543 - 625
Target Start/End: Complemental strand, 2880 - 2800
Alignment:
Q  543 taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttattttgtaagttgacaatataataa 625  Q
    ||||| |||||||||||||| | | ||| ||||||||||||||||||||| ||||||||||||||   |||||||||||||||    
T  2880 taagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgt--tttgacaatataataa 2800  T

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Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 19103 - 19208
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||| |||| |||||||||||| || |||||| | |||||||| || | | |||||||| | ||| |||||||||||||||    
T  19103 cggattaggcaagtgtaccaaattgttt-tcaagtaataaaatgataagtaaattatcgtatgcacatgaattatcgtgttgtctaaacaattcgcgtta 19201  T
Q  598 cttattt 604  Q
     ||||||    
T  19202 attattt 19208  T

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Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 592
Target Start/End: Complemental strand, 7516 - 7425
Alignment:
Q  502 attaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcg 592  Q
    |||||| || ||||| ||||||||||||||||||||||||| |||||||||||| ||||  | ||| ||| |||||| ||| ||||||||||    
T  7516 attaggaaaatgtactaaatcgtttatcaagtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaattcg 7425  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 576
Target Start/End: Complemental strand, 15572 - 15494
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcgtatccataaggattatcgtt 576  Q
    ||||||||||||||||| |||||| |||| |||||||||||||  || ||||||||||||||||| | ||||| |||||    
T  15572 cggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcgtt 15494  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 11236 - 11338
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttactta 601  Q
    |||| ||||||||| |||| ||||||||| |||||||||| ||||||||||||| |||| | | ||||| | |||||  |||||||||| || |||||||    
T  11236 ttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattactta 11335  T
Q  602 ttt 604  Q
    |||    
T  11336 ttt 11338  T

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Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 605
Target Start/End: Complemental strand, 181803 - 181706
Alignment:
Q  508 caagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattcgcgttacttatttt 605  Q
    |||||||||||||||  ||| |||||||||||||| ||| | |||||||||||||| |  |||| |||||| ||||||| || ||| ||||||||||||    
T  181803 caagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataagtcgtgttacttatttt 181706  T

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Target: scaffold0672 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 499 - 591
Target Start/End: Original strand, 1726 - 1819
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtatcgtatccataaggattatcgtttcgtccaaacaattc 591  Q
    ||||||||| ||||||||||||  ||||| ||||||| |||||| |||||||||||||||||||| | | ||| |||||| ||  |||||||||    
T  1726 cggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttttgtgtaaacaattc 1819  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 500 - 599
Target Start/End: Complemental strand, 18851 - 18750
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcg-tatccataaggattatcgtttcgtccaaacaattcgcgtta 597  Q
    ||||||||||||||||||||||  |||||||||||||||| |  |||||||||||||| |||||| | | || ||||| | ||| |||||||| ||||||    
T  18851 ggattaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatgaatcatcgtgttgtctaaacaatttgcgtta 18752  T
Q  598 ct 599  Q
    ||    
T  18751 ct 18750  T

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Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 601
Target Start/End: Complemental strand, 223135 - 223033
Alignment:
Q  501 gattaggcaagtgtaccaaatcgtttatcaagtaataaagt-gtaagtagagtatcg-tatccataaggattatcgtttcgtccaaacaattcgcgttac 598  Q
    |||||||||||||| ||||||  |||||||||||||||| |  |||||||||||||| |||||| | | || ||| | | ||| ||||||||||||||||    
T  223135 gattaggcaagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatgaatcatcatgttgtctaaacaattcgcgttac 223036  T
Q  599 tta 601  Q
    |||    
T  223035 tta 223033  T

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Target: scaffold0598 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 559
Target Start/End: Complemental strand, 5380 - 5321
Alignment:
Q  500 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtagagtatcgtat 559  Q
    |||||| | ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||    
T  5380 ggattaagaaagtgtatcaaatcgtttatcaagtaataaaatgtaactagagtattgtat 5321  T

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Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 550
Target Start/End: Complemental strand, 14010 - 13963
Alignment:
Q  503 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgtaagtaga 550  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  14010 ttaggcaagtgtatcaaatcgtttaccaagtaattaagtgtaagtaga 13963  T

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Target: scaffold0351 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 636 - 720
Target Start/End: Complemental strand, 5724 - 5641
Alignment:
Q  636 ttgcaatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    ||||||||||||||||||||||| ||| |||  |||| ||||||| |||| ||||||| || || |||| ||||||||| |||||    
T  5724 ttgcaatttttatctgtttgcaatagaccaa-attacctgtttttggttgtagaaaaggaaacaacggttaggattctttgaatc 5641  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 640 - 720
Target Start/End: Original strand, 114631 - 114710
Alignment:
Q  640 aatttttatctgtttgcaacagagcaagtttacttgttttttgttgcagaaaagtaagcagcggtcaggattcttcgaatc 720  Q
    ||||||||||||||||||||||| |||  |||| ||||||| |||||||||||| || || |||| |||| |||| |||||    
T  114631 aatttttatctgtttgcaacagaccaa-attacctgtttttggttgcagaaaaggaaacaacggttaggactctttgaatc 114710  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 542
Target Start/End: Original strand, 51115 - 51158
Alignment:
Q  499 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtg 542  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  51115 cggattaggcaagtgaaccaaattgtttaccaagtaataaagtg 51158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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