View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16112_low_35 (Length: 327)
Name: NF16112_low_35
Description: NF16112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16112_low_35 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 311
Target Start/End: Original strand, 38253224 - 38253525
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
38253224 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgcctttgtgatg |
38253323 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa-------tgtgtgt |
209 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
38253324 |
acatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgtgtgtgt |
38253423 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253424 |
atgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctt |
38253523 |
T |
 |
| Q |
310 |
ct |
311 |
Q |
| |
|
|| |
|
|
| T |
38253524 |
ct |
38253525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 17 - 311
Target Start/End: Complemental strand, 43156318 - 43156017
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43156318 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaattaaactctccaagatccttcatgttttgcctttgtgatg |
43156219 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa-------tgtgtgt |
209 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
43156218 |
acatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgtgtgtgt |
43156119 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43156118 |
atgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctt |
43156019 |
T |
 |
| Q |
310 |
ct |
311 |
Q |
| |
|
|| |
|
|
| T |
43156018 |
ct |
43156017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 311
Target Start/End: Complemental strand, 11473642 - 11473341
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11473642 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgcctttgtgatg |
11473543 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa-------tgtgtgt |
209 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
11473542 |
acatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgtgtgtgt |
11473443 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473442 |
atgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctt |
11473343 |
T |
 |
| Q |
310 |
ct |
311 |
Q |
| |
|
|| |
|
|
| T |
11473342 |
ct |
11473341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 28246394 - 28246580
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
28246394 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactcttcaagatccttcatgttttgcctttgtgatg |
28246493 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaat |
203 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28246494 |
acatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaat |
28246580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 311
Target Start/End: Original strand, 10465658 - 10465959
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| | ||||| ||| |
|
|
| T |
10465658 |
tatgccaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcgtattagtaatg |
10465757 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa-------tgtgtgt |
209 |
Q |
| |
|
| ||||||||| |||||||||| |||||||||||| |||| ||| |||| ||||||||||||||| | | ||||||||| ||||| ||||||| |
|
|
| T |
10465758 |
acatattcacatagagagtcagtttcatgtctaataggtatagacaaagccaagaataacttaaactcgttttgaaacaactcaaatatagtgtgtgtgt |
10465857 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|| | ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| ||||||| ||||||| |
|
|
| T |
10465858 |
atatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttttctctctt |
10465957 |
T |
 |
| Q |
310 |
ct |
311 |
Q |
| |
|
|| |
|
|
| T |
10465958 |
ct |
10465959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 311
Target Start/End: Original strand, 43735310 - 43735611
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| | ||||| ||| |
|
|
| T |
43735310 |
tatgccaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcgtattagtaatg |
43735409 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa-------tgtgtgt |
209 |
Q |
| |
|
| ||||||||| |||||||||| |||||||||||| |||| ||| |||| ||||||||||||||| | | ||||||||| ||||| ||||||| |
|
|
| T |
43735410 |
acatattcacatagagagtcagtttcatgtctaataggtatagacaaagccaagaataacttaaactcgttttgaaacaactcaaatatagtgtgtgtgt |
43735509 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|| | ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| ||||||| ||||||| |
|
|
| T |
43735510 |
atatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttttctctctt |
43735609 |
T |
 |
| Q |
310 |
ct |
311 |
Q |
| |
|
|| |
|
|
| T |
43735610 |
ct |
43735611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 203 - 311
Target Start/End: Original strand, 28246609 - 28246717
Alignment:
| Q |
203 |
tgtgtgtatgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttg |
302 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
28246609 |
tgtgtgtatgtttttcccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttg |
28246708 |
T |
 |
| Q |
303 |
ctctcttct |
311 |
Q |
| |
|
||||||||| |
|
|
| T |
28246709 |
ctctcttct |
28246717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 7282240 - 7282426
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| | ||||||||| |
|
|
| T |
7282240 |
tatgccaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcgtattagtgatg |
7282339 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaat |
203 |
Q |
| |
|
| ||||||||| |||||||||| |||||||||||| |||||||| |||| ||||||||||||||| | | ||||||||| |||||| |
|
|
| T |
7282340 |
acatattcacatagagagtcagtttcatgtctaataggtacagacaaagccaagaataacttaaactcgttttgaaacaactcaaat |
7282426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 7282469 - 7282561
Alignment:
| Q |
219 |
ccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctcttct |
311 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| ||||||| ||||||||| |
|
|
| T |
7282469 |
ccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttttctctcttct |
7282561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 17 - 311
Target Start/End: Complemental strand, 25381755 - 25381452
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25381755 |
tatgccaaaagtatcaaattttctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
25381656 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa---------tgtgt |
207 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
25381655 |
acatattcacaaagagagtcagattcatgtctaactggtacatataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgtgtgtgt |
25381556 |
T |
 |
| Q |
208 |
gtatgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctc |
307 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25381555 |
gtatgtttttcccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctc |
25381456 |
T |
 |
| Q |
308 |
ttct |
311 |
Q |
| |
|
|||| |
|
|
| T |
25381455 |
ttct |
25381452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 240; Significance: 1e-133; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 311
Target Start/End: Original strand, 10124414 - 10124714
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
10124414 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacagttaaatgaaactctccaagatcattcatgttttgcctttgtgatg |
10124513 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaa-------tgtgtgt |
209 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
10124514 |
a-atattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgtgtgtgt |
10124612 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10124613 |
atgtttttcccatttggattagtattggtgcagtttcatatgctatccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctt |
10124712 |
T |
 |
| Q |
310 |
ct |
311 |
Q |
| |
|
|| |
|
|
| T |
10124713 |
ct |
10124714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 305
Target Start/End: Original strand, 19308086 - 19308397
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19308086 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
19308185 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaat---gtgtgt---- |
209 |
Q |
| |
|
| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
19308186 |
acataatcacaaagagagtcaaattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgtgtgtgt |
19308285 |
T |
 |
| Q |
210 |
----------------atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactca |
293 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19308286 |
gtgtgtgtgtgtgtgtatgtttttcccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactca |
19308385 |
T |
 |
| Q |
294 |
attcttttgctc |
305 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19308386 |
attcttttgctc |
19308397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 311
Target Start/End: Complemental strand, 25862348 - 25862049
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
|||| |||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
25862348 |
tatggcaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcttattagtgatg |
25862249 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaa-------atgtgtgt |
209 |
Q |
| |
|
| ||||||||| |||||||||| |||||||||||| |||||||| |||| ||||||||||| || | | ||||||||| |||| |||||||| |
|
|
| T |
25862248 |
acatattcacatagagagtcagtttcatgtctaataggtacagacaaagccaagaataactt--actcgttttgaaacaactcaaatatagtatgtgtgt |
25862151 |
T |
 |
| Q |
210 |
atgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctctctt |
309 |
Q |
| |
|
|| | ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||| | | ||||||| ||||||| |
|
|
| T |
25862150 |
atatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttaagttctttttctctctt |
25862051 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 5910910 - 5910724
Alignment:
| Q |
17 |
tatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttagtgatg |
116 |
Q |
| |
|
||||||||| || ||| | ||| ||||||||||||| || ||| |||||||||| |||||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
5910910 |
tatgccaaatgtttcatacttcttacaactacaagtaattgaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcttattagtgatg |
5910811 |
T |
 |
| Q |
117 |
atatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaacccatcttgaaacaattcaaat |
203 |
Q |
| |
|
| ||||||||| |||||||||| |||||||||||| |||||||| |||| ||||||||||||||| | | ||||||||| |||||| |
|
|
| T |
5910810 |
acatattcacatagagagtcagtttcatgtctaatgggtacagacaaagccaagaataacttaaactcgttttgaaacaactcaaat |
5910724 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 311
Target Start/End: Complemental strand, 5910685 - 5910577
Alignment:
| Q |
203 |
tgtgtgtatgttttttccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttg |
302 |
Q |
| |
|
||||||||| | ||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| ||||||| |
|
|
| T |
5910685 |
tgtgtgtatatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttcttttt |
5910586 |
T |
 |
| Q |
303 |
ctctcttct |
311 |
Q |
| |
|
||||||||| |
|
|
| T |
5910585 |
ctctcttct |
5910577 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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