View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16112_low_50 (Length: 265)
Name: NF16112_low_50
Description: NF16112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16112_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 2043728 - 2043958
Alignment:
| Q |
12 |
aagaagaaagatgaaatacatttctggtgtgattttcttctccaacaagaaacatatgatagacagacacagcacacgtggactgtgaggaatgaccagt |
111 |
Q |
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| T |
2043728 |
aagaagaaagataaaatacatttctggtgtgattttcttctccaacaagaaacatatgatagacagacacagcacacgtggactgtgaggaatgaccagt |
2043827 |
T |
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| Q |
112 |
tctcatagctctaatttataggacaagttaaatgaccagttctcaatgtatcattactcttttaactattttatcaaaatataaatttaatagtttgttc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2043828 |
tctcatagctctaatttataggacaagttaaatgaccagttctcaatgtatcattactc-tttaactattttatcaaaatataaatttaatagtttgttc |
2043926 |
T |
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| Q |
212 |
aaggtattttcagttctattgttttcttgata |
243 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
2043927 |
aaggtattttcagttctattgttttcttgata |
2043958 |
T |
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