View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16112_low_53 (Length: 255)
Name: NF16112_low_53
Description: NF16112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16112_low_53 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 42413274 - 42413047
Alignment:
| Q |
10 |
aatactcaatctcaacaataacaagtttagaggaccaataccagaaaccattggcaatttgagaaaactcactagactcaccttctcagataactttttc |
109 |
Q |
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| T |
42413274 |
aatactcaatctcaacaataacaagtttagaggaccaataccagaaaccattggcaatttgagaaaactcactagactcaccttctcagataactttttc |
42413175 |
T |
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| Q |
110 |
actggtggtattcctcaagaaatcattgaacttaagagacttgaatatcttgatctttccgcgaacaggctttccggcacaatcccttctaatatgacag |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42413174 |
actggtggtattcctcaagaaatcattgaacttaagagacttgaatatcttgatctttccgcgaacaggctttccggcacaatcccttctaatatgacag |
42413075 |
T |
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| Q |
210 |
gtttgagaagcttaacttacttgagctt |
237 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
42413074 |
gtttgagaagcttaacttacttgagctt |
42413047 |
T |
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