View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16115_low_15 (Length: 233)
Name: NF16115_low_15
Description: NF16115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16115_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5373322 - 5373108
Alignment:
| Q |
1 |
attcttttgctttttgagaactatggttgggcgtgtgaaatgatgattatatgactctttcaattatttaaccaggtaaaggagaaacaacaaggacaag |
100 |
Q |
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| T |
5373322 |
attcttttgctttttgagaactatggttgggcgtgtgaaatgatgactatatgactctttcaattatttaaccaggtaaaggagaaacaacaaggacaag |
5373223 |
T |
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| Q |
101 |
ctaagacaaatactatttatatatgcattttgtacctacaattcactcattttgttctcaaaagaagtcttcaagaaaaagctcattcctgaaatttttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5373222 |
ctaagacaaatactatttatatatgcattttgtacctacaattcactcattttgttctcaaaagaagtcttcaagaaaaagctcattcctgaaatttttt |
5373123 |
T |
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| Q |
201 |
aaatagctataatat |
215 |
Q |
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||||||||||||||| |
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| T |
5373122 |
aaatagctataatat |
5373108 |
T |
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