View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16116_low_8 (Length: 219)
Name: NF16116_low_8
Description: NF16116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16116_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 42798746 - 42798927
Alignment:
| Q |
16 |
agtggagttatgtgtggattgtgagagagactgttgttaattatgttacgcagagtaatgtatgaacattgttggaaaggagtcttatcgagtgtattca |
115 |
Q |
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| T |
42798746 |
agtggagttatgtgtggattgtgagagagactgttgttaattatgttacgcagagtaatgtatgaacattgttggaaaggagtcttatcgagtgtattca |
42798845 |
T |
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| Q |
116 |
aagacttgtagaaatggactgggaggtgaagatatgccactcatatcatgaagcaaagaatataatgatgctttgactgttt |
197 |
Q |
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| T |
42798846 |
aagacttgtagaaatggactgggaggtgaagatatgccactcgtatcatgaagcaaagaatataatgatgctttgattgttt |
42798927 |
T |
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