View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16117_high_9 (Length: 317)
Name: NF16117_high_9
Description: NF16117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16117_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 308
Target Start/End: Original strand, 7736275 - 7736564
Alignment:
| Q |
19 |
aaaattcattaagtttcggtataagatgcatacctttatttgcagcacactctttaagactcttcttagcatactatttggacggttgaaatttaaatgg |
118 |
Q |
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| T |
7736275 |
aaaattcattaagtttcggtataagatgcatacctttatttgcaacacactctttaagactcttcttagcatactatttggacggttgaaattcaaatgg |
7736374 |
T |
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| Q |
119 |
gtcccactaaaacatgactaaaatgtgagtgttttgaagagtgtgttgctgatactcatcgataataacagaatcaaaaagatagttaatttttcttaac |
218 |
Q |
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| T |
7736375 |
gtcccattaaaatatgactaaaatgtgagtgtttagaagagtgtattgctgatactcgtcgataataaaggaatcaaaaagatagttaatttttcttatc |
7736474 |
T |
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| Q |
219 |
aataaaggatggttattgtttttggtgaaataaaggatgctcaattatcttttgttaattgtagatgatacctgtagctgctgatgatgt |
308 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| |
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| T |
7736475 |
aataaaggatggttattgtttttggtgaaatgaaggatgctcaactatcttttgttaattgtagatgatacctgtggctgctaatgatgt |
7736564 |
T |
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